BLASTX nr result
ID: Rehmannia27_contig00030920
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00030920
(449 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB73911.1| polyprotein [Citrus sinensis] 66 6e-10
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 66 8e-10
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 64 4e-09
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 64 4e-09
gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposo... 62 2e-08
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 61 3e-08
gb|AFB73912.1| polyprotein [Citrus sinensis] 61 4e-08
gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposo... 60 6e-08
gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposo... 60 6e-08
gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposo... 60 6e-08
gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposo... 60 6e-08
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 60 6e-08
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 60 1e-07
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 66.2 bits (160), Expect = 6e-10
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = -2
Query: 448 VDMQKIHTDENLADCMTKPINTGKFEWCRSSCGLAET 338
VD+QKIHT ENLAD +TKPINT KF W RSSCGLAET
Sbjct: 1273 VDLQKIHTKENLADVLTKPINTDKFVWSRSSCGLAET 1309
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 65.9 bits (159), Expect = 8e-10
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = -2
Query: 448 VDMQKIHTDENLADCMTKPINTGKFEWCRSSCGLAET 338
VDMQKIHT++NLAD MTKPINT KF WCRSS GL ET
Sbjct: 1269 VDMQKIHTNDNLADVMTKPINTDKFVWCRSSYGLLET 1305
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 63.9 bits (154), Expect = 4e-09
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = -2
Query: 448 VDMQKIHTDENLADCMTKPINTGKFEWCRSSCGLAET 338
VDMQKIHT++NLAD MTKPIN KF WCRSS GL ET
Sbjct: 1269 VDMQKIHTNDNLADVMTKPINADKFVWCRSSYGLLET 1305
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 63.9 bits (154), Expect = 4e-09
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = -2
Query: 448 VDMQKIHTDENLADCMTKPINTGKFEWCRSSCGLAET 338
VDMQKIHT++NLAD MTKPIN KF WCRSS GL ET
Sbjct: 1269 VDMQKIHTNDNLADVMTKPINADKFVWCRSSYGLLET 1305
>gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 62.0 bits (149), Expect = 2e-08
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = -2
Query: 448 VDMQKIHTDENLADCMTKPINTGKFEWCRSSCGLAET 338
VDMQKIHT +N+AD MTKP+NT KF WCRS GL ET
Sbjct: 1220 VDMQKIHTKDNIADVMTKPVNTDKFTWCRSLFGLLET 1256
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 61.2 bits (147), Expect = 3e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = -2
Query: 448 VDMQKIHTDENLADCMTKPINTGKFEWCRSSCGLAET 338
V+MQKIHT +NLAD MTKPIN+ KF WCRSS GL ET
Sbjct: 1269 VNMQKIHTKDNLADVMTKPINSDKFIWCRSSYGLLET 1305
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 60.8 bits (146), Expect = 4e-08
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = -2
Query: 448 VDMQKIHTDENLADCMTKPINTGKFEWCRSSCGLAET 338
VD+QKIHT ENLAD +TK INT KF W RSSCGLA T
Sbjct: 1273 VDLQKIHTKENLADVLTKSINTDKFVWSRSSCGLAAT 1309
>gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 60.5 bits (145), Expect = 6e-08
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = -2
Query: 448 VDMQKIHTDENLADCMTKPINTGKFEWCRSSCGLAET 338
VDMQKIHT +N+AD MTKP+NT KF WCRS GL +T
Sbjct: 1220 VDMQKIHTKDNIADVMTKPVNTDKFTWCRSLFGLLKT 1256
>gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 60.5 bits (145), Expect = 6e-08
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = -2
Query: 448 VDMQKIHTDENLADCMTKPINTGKFEWCRSSCGLAET 338
VDMQKIHT +N+AD MTKP+NT KF WCRS GL +T
Sbjct: 1220 VDMQKIHTKDNIADVMTKPVNTDKFTWCRSLFGLLKT 1256
>gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 60.5 bits (145), Expect = 6e-08
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = -2
Query: 448 VDMQKIHTDENLADCMTKPINTGKFEWCRSSCGLAET 338
VDMQKIHT +N+AD MTKP+NT KF WCRS GL +T
Sbjct: 1269 VDMQKIHTKDNIADVMTKPVNTDKFTWCRSLFGLLKT 1305
>gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 60.5 bits (145), Expect = 6e-08
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = -2
Query: 448 VDMQKIHTDENLADCMTKPINTGKFEWCRSSCGLAET 338
VDMQKIHT +N+AD MTKP+NT KF WCRS GL +T
Sbjct: 1269 VDMQKIHTKDNIADVMTKPVNTDKFTWCRSLFGLLKT 1305
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 60.5 bits (145), Expect = 6e-08
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = -2
Query: 448 VDMQKIHTDENLADCMTKPINTGKFEWCRSSCGLAET 338
VDMQKIHT++NLAD MTK INT KF WCRS GL ET
Sbjct: 1269 VDMQKIHTNDNLADAMTKSINTDKFIWCRSLYGLLET 1305
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 59.7 bits (143), Expect = 1e-07
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = -2
Query: 448 VDMQKIHTDENLADCMTKPINTGKFEWCRSSCGLAET 338
VD+QKIHT +N+AD +TK IN KF WCRSSCGL ET
Sbjct: 1262 VDLQKIHTADNVADFLTKIINVDKFTWCRSSCGLIET 1298