BLASTX nr result

ID: Rehmannia27_contig00030231 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00030231
         (501 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015158622.1| PREDICTED: F-box protein At4g18380-like [Sol...    63   1e-08
ref|XP_009804959.1| PREDICTED: F-box protein At1g30200-like [Nic...    60   1e-07
emb|CBI24218.3| unnamed protein product [Vitis vinifera]               56   2e-06
emb|CDO99473.1| unnamed protein product [Coffea canephora]             55   7e-06
ref|XP_004139055.1| PREDICTED: F-box protein At4g18380-like [Cuc...    55   7e-06
gb|KVI08022.1| F-box domain, cyclin-like protein [Cynara cardunc...    54   1e-05

>ref|XP_015158622.1| PREDICTED: F-box protein At4g18380-like [Solanum tuberosum]
          Length = 350

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 13/130 (10%)
 Frame = +1

Query: 49  RYAFVESILGDFQNLKNVVVTDCMGQGRVELDEEEIDGVRAIGNALEDKVECC-VRVWRL 225
           R+  +E ++ + + L  VV+ D +GQG+V ++ EE++ +R        K+    V++W  
Sbjct: 218 RHCLLEEVIKEKKLLNKVVIMDDIGQGKVCMNGEEVEEMRRDAEVFSSKMPALKVKMWYS 277

Query: 226 PVVKLPLSGCVMKEATLCVFKEV----GIDDG--LMAE------NAFEEKEYCELAKTIM 369
           P ++LP  GCVMK ATL V K V      DDG  L+A+      +  EEK + E+A+ ++
Sbjct: 278 PELELPEGGCVMKGATLVVIKPVEEWSKADDGGDLVAKGFGFAGDGKEEKVFDEVARELV 337

Query: 370 KKGACYEFKV 399
           K    Y  ++
Sbjct: 338 KLERSYSLEM 347


>ref|XP_009804959.1| PREDICTED: F-box protein At1g30200-like [Nicotiana sylvestris]
          Length = 362

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 16/133 (12%)
 Frame = +1

Query: 49  RYAFVESILGDFQNLKNVVVTDCMGQGRVELDEEEIDGVRA---IGNALEDKVECC-VRV 216
           R+  +E  + + + L+ VV+TD +GQG   ++ E+++ +R    + ++   KV    V++
Sbjct: 227 RHCLLEETIKEKKMLEKVVITDDIGQGICSMNCEQVEEMRRNTRVFSSNRSKVPALKVKM 286

Query: 217 WRLPVVKLPLSGCVMKEATLCVFKEV----GIDDGL--------MAENAFEEKEYCELAK 360
           W +P ++LP  GCVMK ATL V K V      DDG          A    EEK + E+AK
Sbjct: 287 WYVPELELPAKGCVMKGATLVVVKPVEEWSKADDGRDLVAGGFGFAREGKEEKVFDEVAK 346

Query: 361 TIMKKGACYEFKV 399
            ++K    Y  ++
Sbjct: 347 ELVKLKRSYSLEM 359


>emb|CBI24218.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
 Frame = +1

Query: 49  RYAFVESILGDF-QNLKNVVVTDCMGQGRVELDEEEIDGVRAIGNALEDKVEC-----CV 210
           R+  ++ I+ D    L+++V+ D   QGR+ + E++   +R   N             C+
Sbjct: 208 RHCLLKQIIADNPMMLRSLVIEDGSKQGRLRMGEDQFKELRKCVNTRPPLERTKLPAICI 267

Query: 211 RVWRLPVVKLPLSGCVMKEATLCVFKEVG-----IDDGLMAENAFEEKE----YCELAKT 363
           ++W +P+++LP SGCVMK ATL V + +        DG +   AF+ +E     CE  + 
Sbjct: 268 KLWYVPLLELPASGCVMKGATLIVIRPLNQVMKMKSDGDLLAGAFDGEEEAEALCEAVRE 327

Query: 364 IMKKGACY 387
           I+K+   Y
Sbjct: 328 ILKEKKPY 335


>emb|CDO99473.1| unnamed protein product [Coffea canephora]
          Length = 316

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
 Frame = +1

Query: 40  AVWRYAFVESILGDF-QNLKNVVVTDCMGQGRVELDEEEIDGVRAIGNALEDKVECCVRV 216
           A W + FVE ++    ++L+ VVV D   +G+V     +I  +R  GN+     E  V+ 
Sbjct: 178 ACWWFKFVEKLVRLLPESLQKVVVADSKREGKVHFARRDIIRMRN-GNSNFGVGETNVKA 236

Query: 217 WRLPVVKLPLSGCVMKEATLCVFK---EVGIDDGLMAENAFEEKE----YCELAKTIMKK 375
           W  P + LPLSG VMK  TL + K       DD L+A+ AF+ ++    Y E  +  MK+
Sbjct: 237 WHAPFLILPLSGYVMKTVTLFIIKGTDRSDSDDLLIAKEAFDGEDDHQVYVEAIEETMKR 296


>ref|XP_004139055.1| PREDICTED: F-box protein At4g18380-like [Cucumis sativus]
           gi|700211426|gb|KGN66522.1| hypothetical protein
           Csa_1G617380 [Cucumis sativus]
          Length = 354

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
 Frame = +1

Query: 40  AVWRYAFVESILGDFQNLKNVVVTDCMGQGRVELDEEEIDGVR-----AIGNALEDKV-- 198
           A  R+  V+ ++ DF  LK V++TD   QGR+ ++EEE+  +R     +  + +E  V  
Sbjct: 215 ASMRHYLVKQMVNDFPLLKTVLITDSAKQGRLCMEEEEVMELRESMQLSSSSYVERSVIP 274

Query: 199 ECCVRVWRLPVVKLPLSGCVMKEATLCVFKEVG----------IDDGLMAENAFEEKEYC 348
           +  +++W +PV+ LP +G VM  ATL V K  G          I D   +E+  +   Y 
Sbjct: 275 DLKMKMWYVPVLDLPEAGFVMTAATLVVIKPSGGGMGLDGLERIGDEFDSEDGEKFGVYG 334

Query: 349 ELAKTIMKKGACYEFKV 399
           E  + +MK    Y  +V
Sbjct: 335 EAVRKLMKLKRNYALEV 351


>gb|KVI08022.1| F-box domain, cyclin-like protein [Cynara cardunculus var.
           scolymus]
          Length = 362

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
 Frame = +1

Query: 49  RYAFVESILGDFQNLKNVVVTDCMGQGRVELDEEEIDGVRAIGNALE----DKVEC---C 207
           R+  ++ I+   + +++V ++D   QG +E+ E ++  +R   N+      ++ E     
Sbjct: 231 RHHMLKQIIALNRMIRDVKISDGSKQGTIEMTERQVVELRKEMNSTAVVEPERTEVPAVT 290

Query: 208 VRVWRLPVVKLPLSGCVMKEATLCVFKEVGI-----DDGLMAENAFEEKEYCELAKTIMK 372
           +++W +PV++LP SGCVMK ATL V +         DD  +A  AFEEK   E  + ++ 
Sbjct: 291 IKMWYVPVLELPESGCVMKGATLAVIRPAVTAMEKDDDVSLAMGAFEEKCMGEAVRKLID 350

Query: 373 KGACYEFKV 399
           +   Y  ++
Sbjct: 351 RKKSYTLEM 359


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