BLASTX nr result
ID: Rehmannia27_contig00029531
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00029531
(577 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012828447.1| PREDICTED: pentatricopeptide repeat-containi... 320 e-105
ref|XP_011087804.1| PREDICTED: pentatricopeptide repeat-containi... 298 3e-96
emb|CDO97508.1| unnamed protein product [Coffea canephora] 248 2e-79
ref|XP_009783824.1| PREDICTED: pentatricopeptide repeat-containi... 247 1e-76
ref|XP_009615517.1| PREDICTED: pentatricopeptide repeat-containi... 247 1e-76
ref|XP_015062709.1| PREDICTED: pentatricopeptide repeat-containi... 245 3e-76
ref|XP_015062693.1| PREDICTED: pentatricopeptide repeat-containi... 245 5e-76
ref|XP_015062668.1| PREDICTED: pentatricopeptide repeat-containi... 245 9e-76
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi... 243 5e-75
ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi... 243 7e-75
gb|KVI07821.1| Pentatricopeptide repeat-containing protein [Cyna... 223 7e-67
ref|XP_012089183.1| PREDICTED: pentatricopeptide repeat-containi... 216 1e-64
gb|KVI07824.1| Pentatricopeptide repeat-containing protein [Cyna... 207 7e-61
ref|XP_008459827.1| PREDICTED: pentatricopeptide repeat-containi... 202 2e-59
ref|XP_008459803.1| PREDICTED: pentatricopeptide repeat-containi... 202 5e-59
gb|KVI07848.1| Pentatricopeptide repeat-containing protein [Cyna... 205 7e-59
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi... 199 7e-58
ref|XP_011648579.1| PREDICTED: pentatricopeptide repeat-containi... 199 1e-57
ref|XP_010656116.1| PREDICTED: pentatricopeptide repeat-containi... 198 2e-57
ref|XP_011046008.1| PREDICTED: pentatricopeptide repeat-containi... 195 1e-56
>ref|XP_012828447.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Erythranthe guttata] gi|848930449|ref|XP_012828448.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Erythranthe guttata]
gi|604298483|gb|EYU18527.1| hypothetical protein
MIMGU_mgv1a003955mg [Erythranthe guttata]
Length = 552
Score = 320 bits (820), Expect = e-105
Identities = 155/192 (80%), Positives = 175/192 (91%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P SSVLD VVSSFANAGKF+IAEEIL+A+AE+CNEK+E+VSSFVYNN LSML N+N++++
Sbjct: 142 PDSSVLDFVVSSFANAGKFRIAEEILIARAEYCNEKDELVSSFVYNNFLSMLTNKNRIDD 201
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
AV+FFK+H+LRL+S CPDTCSFNIVMRGLCR SKV+KAFEFFDVM+SF C PDLVTYNTL
Sbjct: 202 AVLFFKSHILRLKSFCPDTCSFNIVMRGLCRASKVDKAFEFFDVMRSFSCSPDLVTYNTL 261
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
INGLCRVGKVDRAE LLREIKVQS FS DVVTYTSVISGYCK G D A+ LF+EMINNG
Sbjct: 262 INGLCRVGKVDRAEELLREIKVQSEFSADVVTYTSVISGYCKLGKTDAAAFLFEEMINNG 321
Query: 542 IKPNLFTFNCII 577
I+PNLFTFN II
Sbjct: 322 IRPNLFTFNAII 333
Score = 75.9 bits (185), Expect = 8e-13
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 6/191 (3%)
Frame = +2
Query: 23 SVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSS------FVYNNLLSMLMNRNQVNEA 184
SV+S + GK A + EE++++ F +N ++ + +V A
Sbjct: 296 SVISGYCKLGKTDAAAFLF----------EEMINNGIRPNLFTFNAIIDGFGKKGEVASA 345
Query: 185 VVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 364
++ + PD +F ++ G CR + + + M P++ T++ LI
Sbjct: 346 SKMYER--MTATGFRPDVVTFTSLIDGHCRCGDLGQGIHLLNEMNEKRVSPNVFTFSVLI 403
Query: 365 NGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGI 544
+ LC+ +++ A LL ++K + P Y VI GYCK+GN+D+A+ + EM G
Sbjct: 404 SALCKENRLNEARDLLNQLKWREDIVPPPFVYNPVIDGYCKAGNVDEANAIVAEMEAKGC 463
Query: 545 KPNLFTFNCII 577
+ TF +I
Sbjct: 464 VHDKMTFTILI 474
Score = 65.9 bits (159), Expect = 2e-09
Identities = 33/121 (27%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
Frame = +2
Query: 218 RSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMK-SFGCHPDLVTYNTLINGLCRVGKVD 394
+ + P+ +F++++ LC+ +++ +A + + +K P YN +I+G C+ G VD
Sbjct: 390 KRVSPNVFTFSVLISALCKENRLNEARDLLNQLKWREDIVPPPFVYNPVIDGYCKAGNVD 449
Query: 395 RAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTFNCI 574
A A++ E++ + G D +T+T +I G+C G M +A ++++M++ G P+ T + +
Sbjct: 450 EANAIVAEMEAK-GCVHDKMTFTILILGHCMKGRMFEAIGMYNKMLSVGCVPDNITMSSL 508
Query: 575 I 577
I
Sbjct: 509 I 509
Score = 58.9 bits (141), Expect = 5e-07
Identities = 40/139 (28%), Positives = 70/139 (50%)
Frame = +2
Query: 101 NEKEEIVSSFVYNNLLSMLMNRNQVNEAVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVS 280
NEK + F ++ L+S L N++NEA N + + P +N V+ G C+
Sbjct: 388 NEKRVSPNVFTFSVLISALCKENRLNEARDLL-NQLKWREDIVPPPFVYNPVIDGYCKAG 446
Query: 281 KVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEALLREIKVQSGFSPDVVTY 460
V++A M++ GC D +T+ LI G C G++ A + ++ + G PD +T
Sbjct: 447 NVDEANAIVAEMEAKGCVHDKMTFTILILGHCMKGRMFEAIGMYNKM-LSVGCVPDNITM 505
Query: 461 TSVISGYCKSGNMDDASTL 517
+S+IS K+G +A+ +
Sbjct: 506 SSLISCLRKAGMAREANEI 524
>ref|XP_011087804.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum] gi|747081065|ref|XP_011087805.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Sesamum indicum]
gi|747081067|ref|XP_011087806.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum] gi|747081069|ref|XP_011087807.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Sesamum indicum]
gi|747081071|ref|XP_011087808.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum] gi|747081073|ref|XP_011087809.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Sesamum indicum]
gi|747081075|ref|XP_011087810.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum]
Length = 552
Score = 298 bits (763), Expect = 3e-96
Identities = 143/192 (74%), Positives = 166/192 (86%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P S+VLD VVSSF NAGKF++AEEIL+A+AE CNEK E VSSFVYN L +L+NRN+V+E
Sbjct: 139 PNSAVLDLVVSSFGNAGKFRVAEEILIAQAEICNEKGETVSSFVYNKFLCILINRNRVDE 198
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
AV+FF+ H+LRL S CPDT SFNIV++GLCRV KV+ AFEF DVM+SF CHPDLVTYNTL
Sbjct: 199 AVLFFRGHILRLGSFCPDTQSFNIVIKGLCRVGKVDTAFEFLDVMRSFSCHPDLVTYNTL 258
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
ING CRVG +DRAE LLRE+K QSGFSPDVVTYTSVISGYC+SG M++A+ LFDEMIN G
Sbjct: 259 INGFCRVGHMDRAEELLREVKPQSGFSPDVVTYTSVISGYCRSGKMEEAAALFDEMINYG 318
Query: 542 IKPNLFTFNCII 577
+PNLFTFN II
Sbjct: 319 TRPNLFTFNVII 330
Score = 100 bits (250), Expect = 1e-21
Identities = 62/193 (32%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P + + V+ GK A E L F + + YN L++ ++
Sbjct: 215 PDTQSFNIVIKGLCRVGKVDTAFEFLDVMRSFSCHPDLVT----YNTLINGFCRVGHMDR 270
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
A + + PD ++ V+ G CR K+E+A FD M ++G P+L T+N +
Sbjct: 271 AEELLRE-VKPQSGFSPDVVTYTSVISGYCRSGKMEEAAALFDEMINYGTRPNLFTFNVI 329
Query: 362 INGLCRVGKVDRAEAL-LREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINN 538
I+G + GKV A AL + E V GF PDVVT+TS+I YC+ G ++ L+DEM
Sbjct: 330 IDGFGKKGKV--ASALKMYERMVNCGFHPDVVTFTSLIDCYCRRGELEQGMKLWDEMNER 387
Query: 539 GIKPNLFTFNCII 577
+ PN FTF+ +I
Sbjct: 388 KVSPNAFTFSILI 400
Score = 75.9 bits (185), Expect = 8e-13
Identities = 46/185 (24%), Positives = 88/185 (47%)
Frame = +2
Query: 23 SVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVVFFKN 202
SV+S + +GK + A + + + F +N ++ + +V A+ ++
Sbjct: 293 SVISGYCRSGKMEEAAALFDEMINYGTRP----NLFTFNVIIDGFGKKGKVASALKMYER 348
Query: 203 HMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRV 382
M+ PD +F ++ CR ++E+ + +D M P+ T++ LI LC+
Sbjct: 349 -MVNC-GFHPDVVTFTSLIDCYCRRGELEQGMKLWDEMNERKVSPNAFTFSILITSLCKE 406
Query: 383 GKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFT 562
+++ A LLR++ + P Y VI G+CK+GN+D+A+ + EM G + T
Sbjct: 407 NRLNEARDLLRQLNWREDIVPPPFIYNPVIDGFCKAGNIDEANAIVKEMEMKGCVHDKMT 466
Query: 563 FNCII 577
F +I
Sbjct: 467 FTILI 471
Score = 73.2 bits (178), Expect = 7e-12
Identities = 44/196 (22%), Positives = 101/196 (51%), Gaps = 4/196 (2%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P + ++ F GK A ++ C ++V+ + +L+ R ++ +
Sbjct: 321 PNLFTFNVIIDGFGKKGKVASALKMYERMVN-CGFHPDVVT---FTSLIDCYCRRGELEQ 376
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVT---- 349
+ + + R + P+ +F+I++ LC+ +++ +A D+++ D+V
Sbjct: 377 GMKLWDE--MNERKVSPNAFTFSILITSLCKENRLNEAR---DLLRQLNWREDIVPPPFI 431
Query: 350 YNTLINGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEM 529
YN +I+G C+ G +D A A+++E++++ G D +T+T +I G+C G M +A ++++M
Sbjct: 432 YNPVIDGFCKAGNIDEANAIVKEMEMK-GCVHDKMTFTILILGHCMKGRMFEAIGMYNKM 490
Query: 530 INNGIKPNLFTFNCII 577
++ G P+ T + +I
Sbjct: 491 LSIGCAPDNITISSLI 506
Score = 59.7 bits (143), Expect = 3e-07
Identities = 38/145 (26%), Positives = 75/145 (51%)
Frame = +2
Query: 101 NEKEEIVSSFVYNNLLSMLMNRNQVNEAVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVS 280
NE++ ++F ++ L++ L N++NEA + R + P +N V+ G C+
Sbjct: 385 NERKVSPNAFTFSILITSLCKENRLNEARDLLRQLNWR-EDIVPPPFIYNPVIDGFCKAG 443
Query: 281 KVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEALLREIKVQSGFSPDVVTY 460
+++A M+ GC D +T+ LI G C G++ A + ++ + G +PD +T
Sbjct: 444 NIDEANAIVKEMEMKGCVHDKMTFTILILGHCMKGRMFEAIGMYNKM-LSIGCAPDNITI 502
Query: 461 TSVISGYCKSGNMDDASTLFDEMIN 535
+S+IS K+G +A+ + ++ N
Sbjct: 503 SSLISCLRKAGMAREANEIQEKASN 527
>emb|CDO97508.1| unnamed protein product [Coffea canephora]
Length = 322
Score = 248 bits (633), Expect = 2e-79
Identities = 117/189 (61%), Positives = 155/189 (82%)
Frame = +2
Query: 11 SVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVV 190
SV++ +VS FANAGKF+I +E+L+++A +EKEE+VSSF +N LLSML+ RN+V+EAV
Sbjct: 120 SVVEFLVSCFANAGKFRICKEVLISQANLSSEKEEVVSSFAHNILLSMLVKRNRVDEAVQ 179
Query: 191 FFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLING 370
FF++H+L LR CPDTCSFNIV+RGLC+ +V+KAF+ F M SFGC PD++TYN+LING
Sbjct: 180 FFQDHILILRGFCPDTCSFNIVIRGLCKGGQVDKAFQLFYDMGSFGCSPDMITYNSLING 239
Query: 371 LCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKP 550
LC VG +DRA LLR+I+ Q G +PDVVTYTS+ISG CKSG M++A++L DEM+ GI+P
Sbjct: 240 LCTVGNLDRALCLLRDIQSQVGVAPDVVTYTSIISGLCKSGKMEEAASLLDEMVQCGIRP 299
Query: 551 NLFTFNCII 577
NL TFN +I
Sbjct: 300 NLITFNVLI 308
>ref|XP_009783824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Nicotiana sylvestris] gi|698470503|ref|XP_009783825.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Nicotiana sylvestris]
gi|698470507|ref|XP_009783826.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana sylvestris] gi|698470511|ref|XP_009783827.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Nicotiana sylvestris]
Length = 546
Score = 247 bits (631), Expect = 1e-76
Identities = 124/191 (64%), Positives = 153/191 (80%), Gaps = 1/191 (0%)
Frame = +2
Query: 8 SSVLDSVVSSFANAGKFKIAEEILVAKAEF-CNEKEEIVSSFVYNNLLSMLMNRNQVNEA 184
SS+L+SV+ + ANAGKF IA+EIL+++AE +E +V FV+N+LLS+LM RNQV+EA
Sbjct: 134 SSILESVLLALANAGKFGIAKEILISQAELGSDEGSFVVRPFVHNSLLSLLMKRNQVDEA 193
Query: 185 VVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 364
V FFK+H+LR L PDTC+FNIV+RGLCRV V+KAFEFF+ M SF C PD+VTYNTLI
Sbjct: 194 VDFFKDHILRSERLFPDTCTFNIVIRGLCRVGGVDKAFEFFNDMGSFDCFPDIVTYNTLI 253
Query: 365 NGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGI 544
NGLC VG+VDRA +LLR +++Q G+SPDVVTYTSVISGYCK G MDDA L DEMI GI
Sbjct: 254 NGLCGVGQVDRARSLLRSLELQDGYSPDVVTYTSVISGYCKLGRMDDAINLMDEMITYGI 313
Query: 545 KPNLFTFNCII 577
P + TFN +I
Sbjct: 314 TPTMVTFNILI 324
Score = 75.9 bits (185), Expect = 8e-13
Identities = 35/116 (30%), Positives = 64/116 (55%)
Frame = +2
Query: 230 PDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEAL 409
PD +F ++ G CR +++ +D M + P+L T++ LI L R +++ A L
Sbjct: 350 PDVVTFTSLIDGHCRTGDLDQGLRLWDEMNTRNLWPNLYTFSVLIGALSRENRLNEAREL 409
Query: 410 LREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTFNCII 577
LR++ ++ P Y V+ G+CK+GN+++A+ + EM + G + FTF +I
Sbjct: 410 LRQLILRDDIVPQPFVYNPVLDGFCKAGNLNEANVIAAEMESKGCCHDKFTFTILI 465
Score = 62.4 bits (150), Expect = 3e-08
Identities = 32/123 (26%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +2
Query: 209 LRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFF-DVMKSFGCHPDLVTYNTLINGLCRVG 385
+ R+L P+ +F++++ L R +++ +A E ++ P YN +++G C+ G
Sbjct: 378 MNTRNLWPNLYTFSVLIGALSRENRLNEARELLRQLILRDDIVPQPFVYNPVLDGFCKAG 437
Query: 386 KVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTF 565
++ A + E++ G D T+T +I G+C G M +A ++D+M++ G P+ T
Sbjct: 438 NLNEANVIAAEME-SKGCCHDKFTFTILILGHCMKGRMLEAMAIYDKMMSLGCAPDDITV 496
Query: 566 NCI 574
+C+
Sbjct: 497 SCL 499
>ref|XP_009615517.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123061|ref|XP_009615518.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123063|ref|XP_009615519.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123065|ref|XP_009615520.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123067|ref|XP_009615521.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
Length = 546
Score = 247 bits (631), Expect = 1e-76
Identities = 125/191 (65%), Positives = 152/191 (79%), Gaps = 1/191 (0%)
Frame = +2
Query: 8 SSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIV-SSFVYNNLLSMLMNRNQVNEA 184
SS+L+ VV + ANAGKF IA+EIL+++AE +E+ +V FV+N+LLS+LM RNQV+ A
Sbjct: 134 SSILEIVVLALANAGKFGIAKEILISQAELGSEEGSVVVRPFVHNSLLSLLMKRNQVDGA 193
Query: 185 VVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 364
V FFK+H+LR L PDTC+FNIV+RGLCRV V+KAFEFF+ M SF C PDLVTYNTLI
Sbjct: 194 VDFFKDHILRSERLFPDTCTFNIVIRGLCRVGGVDKAFEFFNDMGSFDCFPDLVTYNTLI 253
Query: 365 NGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGI 544
NGLC VG+VDRA LLR +++Q G+SPDVVTYTSVISGYCK G MDDA L DEMI GI
Sbjct: 254 NGLCGVGQVDRARGLLRSLELQDGYSPDVVTYTSVISGYCKLGRMDDAINLMDEMITYGI 313
Query: 545 KPNLFTFNCII 577
PN+ TFN +I
Sbjct: 314 SPNMVTFNILI 324
Score = 73.6 bits (179), Expect = 5e-12
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 35/153 (22%)
Frame = +2
Query: 224 LCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDR-- 397
+ P+ +FNI++ G ++ + A + ++ M +FGC PD+VT +LI+G CR G +D+
Sbjct: 313 ISPNMVTFNILINGFGKIGDMFSAQKMYERMCAFGCPPDVVTLTSLIDGHCRTGDLDQGL 372
Query: 398 ---------------------------------AEALLREIKVQSGFSPDVVTYTSVISG 478
A LLR++ ++ P Y V+ G
Sbjct: 373 RLWDEMNARNLWPNLYTFSVLIGAMSKENRLNEARVLLRQLILRDDIVPQPFVYNPVLDG 432
Query: 479 YCKSGNMDDASTLFDEMINNGIKPNLFTFNCII 577
+CK+GN+++A+ + EM + G + FTF +I
Sbjct: 433 FCKAGNLNEANVIAAEMESKGCCHDKFTFTILI 465
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/123 (23%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Frame = +2
Query: 209 LRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFF-DVMKSFGCHPDLVTYNTLINGLCRVG 385
+ R+L P+ +F++++ + + +++ +A ++ P YN +++G C+ G
Sbjct: 378 MNARNLWPNLYTFSVLIGAMSKENRLNEARVLLRQLILRDDIVPQPFVYNPVLDGFCKAG 437
Query: 386 KVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTF 565
++ A + E++ G D T+T +I G+C G M +A ++D+M++ G P+ T
Sbjct: 438 NLNEANVIAAEME-SKGCCHDKFTFTILILGHCMKGRMLEAMAIYDKMMSLGCVPDEITV 496
Query: 566 NCI 574
C+
Sbjct: 497 TCL 499
>ref|XP_015062709.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X3 [Solanum pennellii]
Length = 510
Score = 245 bits (626), Expect = 3e-76
Identities = 121/190 (63%), Positives = 153/190 (80%)
Frame = +2
Query: 8 SSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAV 187
+S+L+SVV + ANAGKF+IA+EIL+++AE E+ IV FV+N+LLS+LM R++V+EAV
Sbjct: 141 NSILESVVLALANAGKFEIAKEILISQAELGREEGSIVRPFVHNSLLSLLMKRSRVDEAV 200
Query: 188 VFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLIN 367
FFK+H+LR L PDTC+FN V+RGLCRV V+KAFEFF+ M SFGC PD VTYNTLIN
Sbjct: 201 DFFKHHILRSDRLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLIN 260
Query: 368 GLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIK 547
GLC VG+V+RA+ LL +++Q G SPDVVTYTS+ISGYCK G MD+A L DEMI+ GI
Sbjct: 261 GLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLGRMDEAINLMDEMISYGIS 320
Query: 548 PNLFTFNCII 577
PNL TFN +I
Sbjct: 321 PNLVTFNILI 330
Score = 79.7 bits (195), Expect = 3e-14
Identities = 37/116 (31%), Positives = 65/116 (56%)
Frame = +2
Query: 230 PDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEAL 409
PD +F ++ G CR +V++ + +D M S P+L TY+ LI+ L + +++ A L
Sbjct: 356 PDVVTFTSLVDGYCRTGEVDQGLKLWDDMNSRNLSPNLYTYSVLISALSKENRLNEAREL 415
Query: 410 LREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTFNCII 577
LR++K + P Y V+ G+CK+GN+ +A+ + EM + G + TF +I
Sbjct: 416 LRQLKSRDDIVPQPFLYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILI 471
>ref|XP_015062693.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Solanum pennellii]
gi|969996347|ref|XP_015062701.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Solanum pennellii]
Length = 529
Score = 245 bits (626), Expect = 5e-76
Identities = 121/190 (63%), Positives = 153/190 (80%)
Frame = +2
Query: 8 SSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAV 187
+S+L+SVV + ANAGKF+IA+EIL+++AE E+ IV FV+N+LLS+LM R++V+EAV
Sbjct: 141 NSILESVVLALANAGKFEIAKEILISQAELGREEGSIVRPFVHNSLLSLLMKRSRVDEAV 200
Query: 188 VFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLIN 367
FFK+H+LR L PDTC+FN V+RGLCRV V+KAFEFF+ M SFGC PD VTYNTLIN
Sbjct: 201 DFFKHHILRSDRLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLIN 260
Query: 368 GLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIK 547
GLC VG+V+RA+ LL +++Q G SPDVVTYTS+ISGYCK G MD+A L DEMI+ GI
Sbjct: 261 GLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLGRMDEAINLMDEMISYGIS 320
Query: 548 PNLFTFNCII 577
PNL TFN +I
Sbjct: 321 PNLVTFNILI 330
Score = 79.7 bits (195), Expect = 4e-14
Identities = 37/116 (31%), Positives = 65/116 (56%)
Frame = +2
Query: 230 PDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEAL 409
PD +F ++ G CR +V++ + +D M S P+L TY+ LI+ L + +++ A L
Sbjct: 356 PDVVTFTSLVDGYCRTGEVDQGLKLWDDMNSRNLSPNLYTYSVLISALSKENRLNEAREL 415
Query: 410 LREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTFNCII 577
LR++K + P Y V+ G+CK+GN+ +A+ + EM + G + TF +I
Sbjct: 416 LRQLKSRDDIVPQPFLYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILI 471
>ref|XP_015062668.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Solanum pennellii]
gi|969996341|ref|XP_015062677.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Solanum pennellii]
gi|969996343|ref|XP_015062684.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Solanum pennellii]
Length = 552
Score = 245 bits (626), Expect = 9e-76
Identities = 121/190 (63%), Positives = 153/190 (80%)
Frame = +2
Query: 8 SSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAV 187
+S+L+SVV + ANAGKF+IA+EIL+++AE E+ IV FV+N+LLS+LM R++V+EAV
Sbjct: 141 NSILESVVLALANAGKFEIAKEILISQAELGREEGSIVRPFVHNSLLSLLMKRSRVDEAV 200
Query: 188 VFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLIN 367
FFK+H+LR L PDTC+FN V+RGLCRV V+KAFEFF+ M SFGC PD VTYNTLIN
Sbjct: 201 DFFKHHILRSDRLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLIN 260
Query: 368 GLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIK 547
GLC VG+V+RA+ LL +++Q G SPDVVTYTS+ISGYCK G MD+A L DEMI+ GI
Sbjct: 261 GLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLGRMDEAINLMDEMISYGIS 320
Query: 548 PNLFTFNCII 577
PNL TFN +I
Sbjct: 321 PNLVTFNILI 330
Score = 79.7 bits (195), Expect = 4e-14
Identities = 37/116 (31%), Positives = 65/116 (56%)
Frame = +2
Query: 230 PDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEAL 409
PD +F ++ G CR +V++ + +D M S P+L TY+ LI+ L + +++ A L
Sbjct: 356 PDVVTFTSLVDGYCRTGEVDQGLKLWDDMNSRNLSPNLYTYSVLISALSKENRLNEAREL 415
Query: 410 LREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTFNCII 577
LR++K + P Y V+ G+CK+GN+ +A+ + EM + G + TF +I
Sbjct: 416 LRQLKSRDDIVPQPFLYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILI 471
>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Solanum lycopersicum] gi|723664227|ref|XP_010315007.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Solanum lycopersicum]
Length = 550
Score = 243 bits (621), Expect = 5e-75
Identities = 120/190 (63%), Positives = 151/190 (79%)
Frame = +2
Query: 8 SSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAV 187
+S+L+SVV + ANAGKF+IA+EIL+++AE E+ IV FV+N+LLS+LM R++V+EAV
Sbjct: 139 NSILESVVLALANAGKFEIAKEILISQAELGREEGSIVRPFVHNSLLSLLMKRSRVDEAV 198
Query: 188 VFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLIN 367
FFK+H+LR L PDTC+FN V+RGLCRV V+KAFEFF+ M SFGC PD VTYNTLIN
Sbjct: 199 DFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLIN 258
Query: 368 GLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIK 547
GLC VG+V+RA+ LL +++Q G SPDVVTYTS+ISGYCK MD+A L DEMI GI
Sbjct: 259 GLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLSRMDEAINLMDEMITYGIS 318
Query: 548 PNLFTFNCII 577
PNL TFN +I
Sbjct: 319 PNLVTFNILI 328
Score = 77.4 bits (189), Expect = 2e-13
Identities = 35/116 (30%), Positives = 65/116 (56%)
Frame = +2
Query: 230 PDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEAL 409
PD +F ++ G CR ++++ + +D M S P+L T++ LI+ L + +++ A L
Sbjct: 354 PDVVTFTSLIDGYCRTGELDQGLKLWDDMNSRNLSPNLYTFSVLISALSKENRLNEAREL 413
Query: 410 LREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTFNCII 577
LR++K + P Y V+ G+CK+GN+ +A+ + EM + G + TF +I
Sbjct: 414 LRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILI 469
Score = 67.0 bits (162), Expect = 9e-10
Identities = 34/120 (28%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +2
Query: 218 RSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFG-CHPDLVTYNTLINGLCRVGKVD 394
R+L P+ +F++++ L + +++ +A E +KS P YN +++G C+ G +
Sbjct: 385 RNLSPNLYTFSVLISALSKENRLNEARELLRQLKSRDDIVPQPFVYNPVLDGFCKAGNLS 444
Query: 395 RAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTFNCI 574
A + E++ G D +T+T +I G+C G M +A +FD+M++ G P+ T +C+
Sbjct: 445 EANVIAAEME-SKGCCHDKITFTILILGHCMKGRMLEALAIFDKMLSLGCVPDDITISCL 503
>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Solanum tuberosum] gi|565370447|ref|XP_006351832.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Solanum tuberosum]
Length = 550
Score = 243 bits (620), Expect = 7e-75
Identities = 120/190 (63%), Positives = 150/190 (78%)
Frame = +2
Query: 8 SSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAV 187
+S+L+SVV + ANAGKF+IA+EIL+++AE E+ IV FV+N+LLS+LM R++V+EAV
Sbjct: 139 NSILESVVLALANAGKFEIAKEILISQAELGREEGRIVRPFVHNSLLSLLMKRSRVDEAV 198
Query: 188 VFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLIN 367
FFK+H+LR L PDTC+FN V+RGLCRV V+KAFEFF+ M SFGC PD VTYNTLIN
Sbjct: 199 DFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCFPDTVTYNTLIN 258
Query: 368 GLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIK 547
GLC VG+V+RA LL +++Q G SPDVVTYTSVI+GYCK G MD+A L DEM GI
Sbjct: 259 GLCSVGQVNRARGLLGNLELQDGLSPDVVTYTSVIAGYCKLGRMDEAINLMDEMTTYGIS 318
Query: 548 PNLFTFNCII 577
PNL TFN +I
Sbjct: 319 PNLVTFNILI 328
Score = 75.1 bits (183), Expect = 1e-12
Identities = 34/116 (29%), Positives = 64/116 (55%)
Frame = +2
Query: 230 PDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEAL 409
PD +F ++ G CR ++++ + +D M + P+L T++ LI+ L + +++ A L
Sbjct: 354 PDVVTFTSLIDGYCRTGELDQGLKLWDEMNTRNLSPNLYTFSILISALSKENRLNEAREL 413
Query: 410 LREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTFNCII 577
LR++K + P Y V+ G+CK+GN+ A+ + EM + G + TF +I
Sbjct: 414 LRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSKANVIAAEMESRGCCHDKITFTILI 469
Score = 68.2 bits (165), Expect = 3e-10
Identities = 35/123 (28%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Frame = +2
Query: 209 LRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFG-CHPDLVTYNTLINGLCRVG 385
+ R+L P+ +F+I++ L + +++ +A E +KS P YN +++G C+ G
Sbjct: 382 MNTRNLSPNLYTFSILISALSKENRLNEARELLRQLKSRDDIVPQPFVYNPVLDGFCKAG 441
Query: 386 KVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTF 565
+ +A + E++ + G D +T+T +I G+C G M +A +FD+M++ G P+ T
Sbjct: 442 NLSKANVIAAEMESR-GCCHDKITFTILILGHCMKGRMLEAMAIFDKMLSLGCVPDDITV 500
Query: 566 NCI 574
+C+
Sbjct: 501 SCL 503
>gb|KVI07821.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 562
Score = 223 bits (567), Expect = 7e-67
Identities = 107/192 (55%), Positives = 141/192 (73%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P SS+L V++SF NAGKF++A+E++V + EK+E++S V+N LLS L+ N ++E
Sbjct: 154 PDSSLLGFVITSFVNAGKFEVAKELMVDHSRSSVEKDEVLSCVVFNKLLSSLVKSNHMDE 213
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
AV FF+N +LRL+ PD C+FNIV+ LCR +V+KAF F+ M+ FGC PDLVTYNTL
Sbjct: 214 AVSFFENIILRLKCYSPDACTFNIVISALCRAREVDKAFSIFNKMRKFGCFPDLVTYNTL 273
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
+NG CR G VD+A LLRE + G SP+VVT+TSVISGYCK G M++A LFD MI +G
Sbjct: 274 LNGFCRAGNVDKAHELLRETCMVDGCSPNVVTFTSVISGYCKLGKMEEAMVLFDNMIGHG 333
Query: 542 IKPNLFTFNCII 577
I+PN TFN II
Sbjct: 334 IRPNTVTFNVII 345
Score = 85.9 bits (211), Expect = 3e-16
Identities = 39/116 (33%), Positives = 67/116 (57%)
Frame = +2
Query: 230 PDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEAL 409
PD +F ++ G CR+ ++++ + +D M +P++ T++ LIN LC G+++ A L
Sbjct: 371 PDVITFTSIIDGHCRLGELQQGLKIWDEMNRRNLYPNIYTFSILINTLCEKGRLNEACDL 430
Query: 410 LREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTFNCII 577
LR++K + P Y VI G+CK+GN+D A+ + EM KP+ TF +I
Sbjct: 431 LRQLKKRDDIVPKTFVYIPVIDGFCKAGNVDKANAIVKEMEEKRCKPDKVTFTILI 486
Score = 71.6 bits (174), Expect = 2e-11
Identities = 38/121 (31%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = +2
Query: 218 RSLCPDTCSFNIVMRGLCRVSKVEKAFEFF-DVMKSFGCHPDLVTYNTLINGLCRVGKVD 394
R+L P+ +F+I++ LC ++ +A + + K P Y +I+G C+ G VD
Sbjct: 402 RNLYPNIYTFSILINTLCEKGRLNEACDLLRQLKKRDDIVPKTFVYIPVIDGFCKAGNVD 461
Query: 395 RAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTFNCI 574
+A A+++E++ + PD VT+T +I G+C G M +A +LF +M+ G P+ T N +
Sbjct: 462 KANAIVKEME-EKRCKPDKVTFTILIIGHCMKGRMIEAISLFQKMLVVGCVPDSVTVNSL 520
Query: 575 I 577
+
Sbjct: 521 V 521
Score = 59.7 bits (143), Expect = 3e-07
Identities = 39/136 (28%), Positives = 68/136 (50%)
Frame = +2
Query: 101 NEKEEIVSSFVYNNLLSMLMNRNQVNEAVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVS 280
N + + + ++ L++ L + ++NEA + + + + P T + V+ G C+
Sbjct: 400 NRRNLYPNIYTFSILINTLCEKGRLNEACDLLRQ-LKKRDDIVPKTFVYIPVIDGFCKAG 458
Query: 281 KVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEALLREIKVQSGFSPDVVTY 460
V+KA M+ C PD VT+ LI G C G++ A +L +++ V G PD VT
Sbjct: 459 NVDKANAIVKEMEEKRCKPDKVTFTILIIGHCMKGRMIEAISLFQKMLV-VGCVPDSVTV 517
Query: 461 TSVISGYCKSGNMDDA 508
S++S K+G DA
Sbjct: 518 NSLVSRLLKAGMPKDA 533
>ref|XP_012089183.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Jatropha curcas] gi|643708689|gb|KDP23605.1|
hypothetical protein JCGZ_23438 [Jatropha curcas]
Length = 545
Score = 216 bits (551), Expect = 1e-64
Identities = 110/193 (56%), Positives = 148/193 (76%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P S++L +++SF AGKF +A+++L +E +SSFVYNNLL+ L+ RNQV+E
Sbjct: 140 PDSTLLRFLLTSFVQAGKFNLAKKLLAE----IQSQEVRISSFVYNNLLNELVRRNQVHE 195
Query: 182 AVVFFKNHMLRLRSLCP-DTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNT 358
A+ F+ H L S P DT +FNI++RGLCRV +V++AFEFF+ M+SFGC PD+VTYNT
Sbjct: 196 ALCLFEEH---LASHSPADTWTFNILIRGLCRVGEVDRAFEFFNDMESFGCLPDIVTYNT 252
Query: 359 LINGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINN 538
LINGLCRV ++DR LL+E++ ++ SPDVVTYTSVISG+CK G M++AS LFDEMI +
Sbjct: 253 LINGLCRVNELDRGHKLLKEVQSRNDCSPDVVTYTSVISGFCKPGKMEEASVLFDEMIRS 312
Query: 539 GIKPNLFTFNCII 577
GIKPN+FTFN +I
Sbjct: 313 GIKPNVFTFNVLI 325
Score = 85.5 bits (210), Expect = 4e-16
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Frame = +2
Query: 23 SVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSS------FVYNNLLSMLMNRNQVNEA 184
SV+S F GK + A + +E++ S F +N L+ ++ A
Sbjct: 288 SVISGFCKPGKMEEASVLF----------DEMIRSGIKPNVFTFNVLIDGFGKIGDMDAA 337
Query: 185 VVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 364
+ M+ L PD +F ++ G CR +V + +D MK+ G P++ TY LI
Sbjct: 338 EAV-REKMVSFGCL-PDVVTFTSLIDGYCRSGQVYLGLKIWDAMKAMGVPPNVYTYAILI 395
Query: 365 NGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGI 544
N LC+ ++ A LR++K S P Y VI G+CK+GN+D+A+ + EM
Sbjct: 396 NALCKENRLHEARDFLRQLKF-SNVVPKPFVYNPVIDGFCKAGNVDEANLIVMEMEEKRC 454
Query: 545 KPNLFTFNCII 577
P+ TFN +I
Sbjct: 455 NPDKITFNILI 465
Score = 73.6 bits (179), Expect = 5e-12
Identities = 33/116 (28%), Positives = 66/116 (56%)
Frame = +2
Query: 230 PDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEAL 409
P+ ++ I++ LC+ +++ +A +F +K P YN +I+G C+ G VD A +
Sbjct: 386 PNVYTYAILINALCKENRLHEARDFLRQLKFSNVVPKPFVYNPVIDGFCKAGNVDEANLI 445
Query: 410 LREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTFNCII 577
+ E++ + +PD +T+ +I G+C G M++A +F +M+ G P+ T N ++
Sbjct: 446 VMEME-EKRCNPDKITFNILIIGHCMKGRMNEAIDIFSKMVAIGCAPDSITINSLV 500
Score = 61.6 bits (148), Expect = 6e-08
Identities = 36/122 (29%), Positives = 66/122 (54%)
Frame = +2
Query: 128 FVYNNLLSMLMNRNQVNEAVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFF 307
+ Y L++ L N+++EA F + L+ ++ P +N V+ G C+ V++A
Sbjct: 389 YTYAILINALCKENRLHEARDFLRQ--LKFSNVVPKPFVYNPVIDGFCKAGNVDEANLIV 446
Query: 308 DVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCK 487
M+ C+PD +T+N LI G C G+++ A + ++ V G +PD +T S++S K
Sbjct: 447 MEMEEKRCNPDKITFNILIIGHCMKGRMNEAIDIFSKM-VAIGCAPDSITINSLVSCLLK 505
Query: 488 SG 493
+G
Sbjct: 506 AG 507
>gb|KVI07824.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 557
Score = 207 bits (526), Expect = 7e-61
Identities = 101/192 (52%), Positives = 139/192 (72%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P +S+L V+ SF NAGKF++A+E++V + EK+ ++S V N +LS L+ NQV+E
Sbjct: 149 PDNSLLGFVIKSFVNAGKFEVAKELIVDSSRSSVEKDGVLSCIVVNKILSSLVKSNQVDE 208
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
AV FF+N +LR + + +FNIV+ GLCR +V+KAF FF+ M+ FGC PD+VTYNTL
Sbjct: 209 AVAFFENIILRSQCYSHNAYTFNIVISGLCRAREVDKAFGFFNHMRMFGCLPDVVTYNTL 268
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
+NG CR G V++A LLRE + G SP+VVT+TSVISGYCK G M++A LF +MI++G
Sbjct: 269 LNGFCRAGNVNKAHDLLRETSMVDGCSPNVVTFTSVISGYCKLGKMEEAMVLFSDMISHG 328
Query: 542 IKPNLFTFNCII 577
I P+ FTFN II
Sbjct: 329 IXPSTFTFNVII 340
Score = 84.0 bits (206), Expect = 1e-15
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P SV+S + GK EE +V ++ + S+F +N ++ ++
Sbjct: 296 PNVVTFTSVISGYCKLGKM---EEAMVLFSDMISHGIX-PSTFTFNVIIDGF---GKIGN 348
Query: 182 AVVFFKNHMLRLRSLC-PDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNT 358
V + + C PD +F ++ G CR+ +V + + +D M +P++ T++
Sbjct: 349 MVSVLNMYEKMVDHGCTPDVITFTSIIDGHCRLGEVHQGLKIWDEMNRRNLYPNIYTFSI 408
Query: 359 LINGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINN 538
LIN LC+ +++ A LL ++K + P Y VI G+CK+GN+D+A+ + EM
Sbjct: 409 LINTLCKZXRLNEARDLLXQLKKRXDIIPKAFVYNPVIDGFCKAGNVDEANVIVKEMEEK 468
Query: 539 GIKPNLFTFNCII 577
P+ TF +I
Sbjct: 469 RCYPDKLTFTILI 481
Score = 74.7 bits (182), Expect = 2e-12
Identities = 38/121 (31%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Frame = +2
Query: 218 RSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKS-FGCHPDLVTYNTLINGLCRVGKVD 394
R+L P+ +F+I++ LC+ ++ +A + +K P YN +I+G C+ G VD
Sbjct: 397 RNLYPNIYTFSILINTLCKZXRLNEARDLLXQLKKRXDIIPKAFVYNPVIDGFCKAGNVD 456
Query: 395 RAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTFNCI 574
A +++E++ + + PD +T+T +I G+C G M +A +LF +MI G P+ T N +
Sbjct: 457 EANVIVKEMEEKRCY-PDKLTFTILIIGHCMKGRMIEAISLFQKMIVXGCAPDSITVNSL 515
Query: 575 I 577
+
Sbjct: 516 V 516
Score = 57.4 bits (137), Expect = 2e-06
Identities = 35/136 (25%), Positives = 69/136 (50%)
Frame = +2
Query: 101 NEKEEIVSSFVYNNLLSMLMNRNQVNEAVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVS 280
N + + + ++ L++ L ++NEA + + + P +N V+ G C+
Sbjct: 395 NRRNLYPNIYTFSILINTLCKZXRLNEARDLLXQ-LKKRXDIIPKAFVYNPVIDGFCKAG 453
Query: 281 KVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEALLREIKVQSGFSPDVVTY 460
V++A M+ C+PD +T+ LI G C G++ A +L +++ V G +PD +T
Sbjct: 454 NVDEANVIVKEMEEKRCYPDKLTFTILIIGHCMKGRMIEAISLFQKMIVX-GCAPDSITV 512
Query: 461 TSVISGYCKSGNMDDA 508
S++S K+G + +A
Sbjct: 513 NSLVSRLLKAGMLKEA 528
>ref|XP_008459827.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
isoform X2 [Cucumis melo]
Length = 548
Score = 202 bits (515), Expect = 2e-59
Identities = 103/192 (53%), Positives = 137/192 (71%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P SS+L+ +VSS+A GKF A+ L C + VS FVYNNLL+ML+ +N V+E
Sbjct: 142 PDSSILELLVSSYARMGKFDSAKNFL--NEVHCYGIK--VSPFVYNNLLNMLVKQNLVDE 197
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
AV F+ H+ PD SFNI++RGLCR+ +++KAFEFF M +FGC PD+V+YNTL
Sbjct: 198 AVSLFREHLEPY--FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTL 255
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
ING CRV ++ + LL+E+ + G SPDV+TYTS+ISGYCK G+M AS LFDEM+++G
Sbjct: 256 INGFCRVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSG 315
Query: 542 IKPNLFTFNCII 577
IKPN FTFN +I
Sbjct: 316 IKPNNFTFNVLI 327
Score = 75.5 bits (184), Expect = 1e-12
Identities = 46/192 (23%), Positives = 96/192 (50%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P + + ++ F G + A ++ K ++V+ +L+ +VN+
Sbjct: 318 PNNFTFNVLIDGFGKVGNMRSAM-VMYEKMLLLGCPPDVVT---VTSLIDGYCREGEVNQ 373
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
+ ++ ++LR+L P+ ++ +++ LC+ +++++A F +KS P YN +
Sbjct: 374 GLKLWEE--MKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEVVPKPFIYNPV 431
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
I+ C+ G+VD A ++ E++ + PD +T+T +I G C G M +A + F +MI
Sbjct: 432 IDRFCKAGQVDEANFIVAEMQ-EKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEIN 490
Query: 542 IKPNLFTFNCII 577
P+ T N +I
Sbjct: 491 CIPDEITINSLI 502
Score = 60.1 bits (144), Expect = 2e-07
Identities = 33/112 (29%), Positives = 59/112 (52%)
Frame = +2
Query: 242 SFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEALLREI 421
+++++MR LC+V + A FD M+S G PD L++ R+GK D A+ L E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKFDSAKNFLNEV 170
Query: 422 KVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTFNCII 577
G Y ++++ K +D+A +LF E + P++++FN +I
Sbjct: 171 HCY-GIKVSPFVYNNLLNMLVKQNLVDEAVSLFREHLEPYFVPDVYSFNILI 221
>ref|XP_008459803.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
isoform X1 [Cucumis melo]
gi|659071437|ref|XP_008459808.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
isoform X1 [Cucumis melo]
gi|659071439|ref|XP_008459817.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
isoform X1 [Cucumis melo]
Length = 588
Score = 202 bits (515), Expect = 5e-59
Identities = 103/192 (53%), Positives = 137/192 (71%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P SS+L+ +VSS+A GKF A+ L C + VS FVYNNLL+ML+ +N V+E
Sbjct: 182 PDSSILELLVSSYARMGKFDSAKNFL--NEVHCYGIK--VSPFVYNNLLNMLVKQNLVDE 237
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
AV F+ H+ PD SFNI++RGLCR+ +++KAFEFF M +FGC PD+V+YNTL
Sbjct: 238 AVSLFREHLEPY--FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTL 295
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
ING CRV ++ + LL+E+ + G SPDV+TYTS+ISGYCK G+M AS LFDEM+++G
Sbjct: 296 INGFCRVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSG 355
Query: 542 IKPNLFTFNCII 577
IKPN FTFN +I
Sbjct: 356 IKPNNFTFNVLI 367
Score = 75.5 bits (184), Expect = 1e-12
Identities = 46/192 (23%), Positives = 96/192 (50%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P + + ++ F G + A ++ K ++V+ +L+ +VN+
Sbjct: 358 PNNFTFNVLIDGFGKVGNMRSAM-VMYEKMLLLGCPPDVVT---VTSLIDGYCREGEVNQ 413
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
+ ++ ++LR+L P+ ++ +++ LC+ +++++A F +KS P YN +
Sbjct: 414 GLKLWEE--MKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEVVPKPFIYNPV 471
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
I+ C+ G+VD A ++ E++ + PD +T+T +I G C G M +A + F +MI
Sbjct: 472 IDRFCKAGQVDEANFIVAEMQ-EKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEIN 530
Query: 542 IKPNLFTFNCII 577
P+ T N +I
Sbjct: 531 CIPDEITINSLI 542
Score = 60.1 bits (144), Expect = 2e-07
Identities = 33/112 (29%), Positives = 59/112 (52%)
Frame = +2
Query: 242 SFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEALLREI 421
+++++MR LC+V + A FD M+S G PD L++ R+GK D A+ L E+
Sbjct: 151 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKFDSAKNFLNEV 210
Query: 422 KVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTFNCII 577
G Y ++++ K +D+A +LF E + P++++FN +I
Sbjct: 211 HCY-GIKVSPFVYNNLLNMLVKQNLVDEAVSLFREHLEPYFVPDVYSFNILI 261
>gb|KVI07848.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 746
Score = 205 bits (521), Expect = 7e-59
Identities = 100/192 (52%), Positives = 138/192 (71%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P S+L V+ SF NAGKF++A+E++V + EK+ ++S V N +LS L+ N+V+E
Sbjct: 264 PDXSLLGFVIKSFVNAGKFEVAKELIVDSSRSSVEKDGVLSCIVVNKILSSLVKSNRVDE 323
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
AV FF+N +LR + + +FNIV+ GLCR +V+KAF FF+ M+ FGC PD+VTYNTL
Sbjct: 324 AVAFFENIILRSQCYSHNAYTFNIVISGLCRAREVDKAFGFFNHMRKFGCLPDVVTYNTL 383
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
+NG CR G V++A LLRE + G SP+VVT+TSVISGYCK G M++A LF +MI++G
Sbjct: 384 LNGFCRAGNVNKAHDLLRETSMVDGCSPNVVTFTSVISGYCKLGKMEEAMVLFSDMISHG 443
Query: 542 IKPNLFTFNCII 577
I P+ FTFN II
Sbjct: 444 IXPSTFTFNVII 455
Score = 89.4 bits (220), Expect = 2e-17
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P SV+S + GK EE +V ++ + S+F +N ++ ++
Sbjct: 411 PNVVTFTSVISGYCKLGKM---EEAMVLFSDMISHGIX-PSTFTFNVIIDGF---GKIGN 463
Query: 182 AVVFFKNHMLRLRSLC-PDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNT 358
V + + C PD +F ++ G CR+ +V + + +D M +P++ T++
Sbjct: 464 MVSVLNMYEKMVDHGCTPDVITFTSIIDGHCRLGEVHQGLKIWDEMNRXNLYPNIYTFSI 523
Query: 359 LINGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINN 538
LIN LC+ +++ A LLR++K +S P Y VI G+CK+GN+D+A+ + EM
Sbjct: 524 LINTLCKENRLNEARDLLRQLKKRSDIIPKAFVYNPVIDGFCKAGNVDEANVIVKEMEEK 583
Query: 539 GIKPNLFTFNCII 577
P+ TF +I
Sbjct: 584 RCYPDKLTFTILI 596
Score = 60.8 bits (146), Expect = 1e-07
Identities = 38/128 (29%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +2
Query: 128 FVYNNLLSMLMNRNQVNEAVVFFKNHMLRLRS-LCPDTCSFNIVMRGLCRVSKVEKAFEF 304
+ ++ L++ L N++NEA + L+ RS + P +N V+ G C+ V++A
Sbjct: 519 YTFSILINTLCKENRLNEARDLLRQ--LKKRSDIIPKAFVYNPVIDGFCKAGNVDEANVI 576
Query: 305 FDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYC 484
M+ C+PD +T+ LI G C G++ A +L +++ V G +PD +T S++S
Sbjct: 577 VKEMEEKRCYPDKLTFTILIIGHCMKGRMIEAISLFQKMIVV-GCAPDSITVNSLVSRLL 635
Query: 485 KSGNMDDA 508
K+G + +A
Sbjct: 636 KAGMLKEA 643
>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
isoform X2 [Cucumis sativus]
gi|778665521|ref|XP_011648581.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
isoform X2 [Cucumis sativus]
Length = 548
Score = 199 bits (505), Expect = 7e-58
Identities = 102/192 (53%), Positives = 136/192 (70%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P SS+L+ +VSS+A GK A+ L C + VS FVYNNLL+ML+ +N V+E
Sbjct: 142 PDSSILELLVSSYARMGKLDSAKNFL--NEVHCYGIK--VSPFVYNNLLNMLVKQNLVDE 197
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
AV+ F+ H+ PD SFNI++RGLCR+ +++KAFEFF M +FGC PD+V+YNTL
Sbjct: 198 AVLLFREHLEPY--FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTL 255
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
ING CRV ++ + LL+E + G SPDV+TYTS+ISGYCK G+M AS LFDEM+++G
Sbjct: 256 INGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSG 315
Query: 542 IKPNLFTFNCII 577
IKPN FTFN +I
Sbjct: 316 IKPNDFTFNVLI 327
Score = 79.3 bits (194), Expect = 5e-14
Identities = 47/192 (24%), Positives = 96/192 (50%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P + ++ F G + A ++ K ++V+ + +L+ +VN+
Sbjct: 318 PNDFTFNVLIDGFGKVGNMRSAM-VMYEKMLLLGCLPDVVT---FTSLIDGYCREGEVNQ 373
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
+ ++ +++R+L P+ ++ +++ LC+ +++ +A F +KS P YN +
Sbjct: 374 GLKLWEE--MKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPV 431
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
I+G C+ GKVD A ++ E++ + PD +T+T +I G C G M +A + F +MI
Sbjct: 432 IDGFCKAGKVDEANFIVAEMQ-EKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEIN 490
Query: 542 IKPNLFTFNCII 577
P+ T N +I
Sbjct: 491 CVPDEITINSLI 502
Score = 60.5 bits (145), Expect = 2e-07
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 34/146 (23%)
Frame = +2
Query: 242 SFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEALLREI 421
+++++MR LC+V + A FD M+S G PD L++ R+GK+D A+ L E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
Query: 422 ----------------------------------KVQSGFSPDVVTYTSVISGYCKSGNM 499
++ F PDV ++ +I G C+ G +
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
Query: 500 DDASTLFDEMINNGIKPNLFTFNCII 577
D A F M N G P++ ++N +I
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLI 256
>ref|XP_011648579.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
isoform X1 [Cucumis sativus]
gi|778665517|ref|XP_011648580.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
isoform X1 [Cucumis sativus]
Length = 588
Score = 199 bits (505), Expect = 1e-57
Identities = 102/192 (53%), Positives = 136/192 (70%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P SS+L+ +VSS+A GK A+ L C + VS FVYNNLL+ML+ +N V+E
Sbjct: 182 PDSSILELLVSSYARMGKLDSAKNFL--NEVHCYGIK--VSPFVYNNLLNMLVKQNLVDE 237
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
AV+ F+ H+ PD SFNI++RGLCR+ +++KAFEFF M +FGC PD+V+YNTL
Sbjct: 238 AVLLFREHLEPY--FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTL 295
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
ING CRV ++ + LL+E + G SPDV+TYTS+ISGYCK G+M AS LFDEM+++G
Sbjct: 296 INGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSG 355
Query: 542 IKPNLFTFNCII 577
IKPN FTFN +I
Sbjct: 356 IKPNDFTFNVLI 367
Score = 79.3 bits (194), Expect = 5e-14
Identities = 47/192 (24%), Positives = 96/192 (50%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P + ++ F G + A ++ K ++V+ + +L+ +VN+
Sbjct: 358 PNDFTFNVLIDGFGKVGNMRSAM-VMYEKMLLLGCLPDVVT---FTSLIDGYCREGEVNQ 413
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
+ ++ +++R+L P+ ++ +++ LC+ +++ +A F +KS P YN +
Sbjct: 414 GLKLWEE--MKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPV 471
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
I+G C+ GKVD A ++ E++ + PD +T+T +I G C G M +A + F +MI
Sbjct: 472 IDGFCKAGKVDEANFIVAEMQ-EKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEIN 530
Query: 542 IKPNLFTFNCII 577
P+ T N +I
Sbjct: 531 CVPDEITINSLI 542
Score = 60.5 bits (145), Expect = 2e-07
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 34/146 (23%)
Frame = +2
Query: 242 SFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEALLREI 421
+++++MR LC+V + A FD M+S G PD L++ R+GK+D A+ L E+
Sbjct: 151 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 210
Query: 422 ----------------------------------KVQSGFSPDVVTYTSVISGYCKSGNM 499
++ F PDV ++ +I G C+ G +
Sbjct: 211 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 270
Query: 500 DDASTLFDEMINNGIKPNLFTFNCII 577
D A F M N G P++ ++N +I
Sbjct: 271 DKAFEFFQNMGNFGCFPDIVSYNTLI 296
>ref|XP_010656116.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Vitis vinifera] gi|731406320|ref|XP_010656117.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Vitis vinifera]
Length = 571
Score = 198 bits (503), Expect = 2e-57
Identities = 106/192 (55%), Positives = 133/192 (69%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P +SVL +VSS +AGKF IA V EF S VYN LL+ L+ NQV+E
Sbjct: 170 PDASVLGFLVSSATDAGKFNIART-WVDGVEF--------SLVVYNKLLNQLVRGNQVDE 220
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
AV FF+ M D+CSFNI++RGLCR+ KV+KAFE F+ M+ FGC PD++TYNTL
Sbjct: 221 AVCFFREQMGLHGPF--DSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTL 278
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
ING CRV +VDR LL+E+ ++ SPDVVTYTS+ISGYCK G M+ AS LF+ MI++G
Sbjct: 279 INGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSG 338
Query: 542 IKPNLFTFNCII 577
IKPN FTFN +I
Sbjct: 339 IKPNAFTFNILI 350
Score = 79.3 bits (194), Expect = 5e-14
Identities = 52/226 (23%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P +++++ F + ++L E ++ + Y +++S ++ +
Sbjct: 270 PDVITYNTLINGFCRVNEVDRGHDLL---KELLSKNDLSPDVVTYTSIISGYCKLGKMEK 326
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
A + F N + + P+ +FNI++ G +V + A ++ M GC PD++T+ +L
Sbjct: 327 ASILFNNMISS--GIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSL 384
Query: 362 INGLCRVGKVDRAEALLREIKVQS-------------------------GFSPDV----- 451
I+G CR GKV+R+ L E+ ++ GF D+
Sbjct: 385 IDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHI 444
Query: 452 ----VTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFTFNCII 577
Y VI G+CK+GN+D+A+ + EM KP+ T+ +I
Sbjct: 445 VAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILI 490
Score = 77.4 bits (189), Expect = 2e-13
Identities = 39/125 (31%), Positives = 67/125 (53%)
Frame = +2
Query: 203 HMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLINGLCRV 382
H L R+L P+ +F I+ LC+ +++ +A F +K YN +I+G C+
Sbjct: 402 HELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKA 461
Query: 383 GKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGIKPNLFT 562
G VD A +L E++ + PD +TYT +I G+C G + +A ++F+ M+ G P+ T
Sbjct: 462 GNVDEANVILAEME-EKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSIT 520
Query: 563 FNCII 577
+I
Sbjct: 521 MTSLI 525
Score = 63.2 bits (152), Expect = 2e-08
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Frame = +2
Query: 122 SSFVYNNLLSMLMNRNQVNEAVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFE 301
+ + + L + L N+++EA F ++ L+ R + +N V+ G C+ V++A
Sbjct: 412 NEYTFAILTNALCKENRLHEARGFLRD--LKWRHIVAQPFMYNPVIDGFCKAGNVDEANV 469
Query: 302 FFDVMKSFGCHPDLVTYNTLINGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGY 481
M+ C PD +TY LI G C G++ A ++ + + +G +PD +T TS+IS
Sbjct: 470 ILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRM-LGTGCAPDSITMTSLISCL 528
Query: 482 CKSGNMDDASTLF---DEMINNGIK 547
K+G ++A + E N G+K
Sbjct: 529 LKAGMPNEAYRIMQIASEDFNLGLK 553
>ref|XP_011046008.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Populus euphratica]
Length = 545
Score = 195 bits (496), Expect = 1e-56
Identities = 98/192 (51%), Positives = 138/192 (71%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P S +L +V+ A A F + +++L KE ++SFVYNNLLS+L+ +NQV+E
Sbjct: 139 PDSKLLGFLVTWMAQASDFDMVKKLLAE----VQGKEVRINSFVYNNLLSVLVKQNQVHE 194
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
A+ FK +++ PDT +FNI++RGLCRV V++AFEFF M+SFGC PD+VTYNTL
Sbjct: 195 AIYLFKEYLVMQSP--PDTWTFNILIRGLCRVGGVDRAFEFFKDMESFGCLPDVVTYNTL 252
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
INGLC+ ++ R L +EI+ +S SPD+VTYTS+ISG+CKSG M +AS LF+EM+ +G
Sbjct: 253 INGLCKANELQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMKSG 312
Query: 542 IKPNLFTFNCII 577
I+PN+ TFN +I
Sbjct: 313 IQPNVITFNVLI 324
Score = 92.4 bits (228), Expect = 1e-18
Identities = 46/149 (30%), Positives = 85/149 (57%), Gaps = 1/149 (0%)
Frame = +2
Query: 134 YNNLLSMLMNRNQVNEAVVFFKNHMLRLRSLC-PDTCSFNIVMRGLCRVSKVEKAFEFFD 310
YN L++ L N++ FK ++ RS C PD ++ ++ G C+ K+++A F+
Sbjct: 249 YNTLINGLCKANELQRGCELFKE--IQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFE 306
Query: 311 VMKSFGCHPDLVTYNTLINGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKS 490
M G P+++T+N LI+G ++G + AEA+ R++ S DVVT+TS+I GYC++
Sbjct: 307 EMMKSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKM-AYFDCSADVVTFTSLIDGYCRA 365
Query: 491 GNMDDASTLFDEMINNGIKPNLFTFNCII 577
G ++ ++ M + P ++T+ +I
Sbjct: 366 GQVNHGLKFWNVMKTRNVSPTVYTYAVLI 394
Score = 84.0 bits (206), Expect = 1e-15
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 6/191 (3%)
Frame = +2
Query: 23 SVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFV------YNNLLSMLMNRNQVNEA 184
S++S F +GK K A + EE++ S + +N L+ + EA
Sbjct: 287 SIISGFCKSGKMKEASNLF----------EEMMKSGIQPNVITFNVLIDGFGKIGNIAEA 336
Query: 185 VVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 364
++ + D +F ++ G CR +V +F++VMK+ P + TY LI
Sbjct: 337 EAMYRK--MAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLI 394
Query: 365 NGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNGI 544
N LC+ +++ A L +IK S P Y VI G+CK+GN+D+ + + EM
Sbjct: 395 NALCKENRLNEARDFLGQIK-NSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKKC 453
Query: 545 KPNLFTFNCII 577
P+ TF +I
Sbjct: 454 DPDKVTFTILI 464
Score = 82.8 bits (203), Expect = 3e-15
Identities = 47/192 (24%), Positives = 94/192 (48%)
Frame = +2
Query: 2 PTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNE 181
P + ++ F G AE + A F + + + +L+ QVN
Sbjct: 315 PNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVT----FTSLIDGYCRAGQVNH 370
Query: 182 AVVFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 361
+ F+ ++++ R++ P ++ +++ LC+ +++ +A +F +K+ P YN +
Sbjct: 371 GLKFW--NVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPV 428
Query: 362 INGLCRVGKVDRAEALLREIKVQSGFSPDVVTYTSVISGYCKSGNMDDASTLFDEMINNG 541
I+G C+ G VD +L+E++ + PD VT+T +I G+C G M +A +F+ M+
Sbjct: 429 IDGFCKAGNVDEGNVILKEME-EKKCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATR 487
Query: 542 IKPNLFTFNCII 577
P+ T N +I
Sbjct: 488 CAPDNITVNSLI 499