BLASTX nr result
ID: Rehmannia27_contig00029019
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00029019
(463 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposo... 74 3e-13
emb|CAN77969.1| hypothetical protein VITISV_027333 [Vitis vinifera] 67 3e-13
emb|CAN81433.1| hypothetical protein VITISV_010698 [Vitis vinifera] 67 4e-13
gb|KYP35691.1| Retrovirus-related Pol polyprotein from transposo... 75 4e-13
gb|KYP37030.1| Retrovirus-related Pol polyprotein from transposo... 75 4e-13
gb|KYP69244.1| Copia protein, partial [Cajanus cajan] 70 6e-13
gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposo... 74 6e-13
gb|KYP31883.1| Retrovirus-related Pol polyprotein from transposo... 75 7e-13
gb|KYP38726.1| Retrovirus-related Pol polyprotein from transposo... 74 8e-13
gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposo... 74 1e-12
gb|KYP41260.1| Retrovirus-related Pol polyprotein from transposo... 74 1e-12
gb|KYP30912.1| Retrovirus-related Pol polyprotein from transposo... 63 1e-12
gb|KYP33249.1| Retrovirus-related Pol polyprotein from transposo... 74 1e-12
gb|KYP33754.1| Retrovirus-related Pol polyprotein from transposo... 74 1e-12
gb|KYP64004.1| Retrovirus-related Pol polyprotein from transposo... 74 1e-12
gb|KYP60252.1| Retrovirus-related Pol polyprotein from transposo... 72 1e-12
gb|ABD63167.1| Zinc knuckle family protein [Asparagus officinalis] 65 2e-12
ref|XP_012572855.1| PREDICTED: uncharacterized protein LOC105852... 68 2e-12
gb|KYP50151.1| Retrovirus-related Pol polyprotein from transposo... 74 2e-12
ref|XP_013445390.1| hypothetical protein MTR_8g058870 [Medicago ... 69 2e-12
>gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 772
Score = 74.3 bits (181), Expect(2) = 3e-13
Identities = 36/62 (58%), Positives = 43/62 (69%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIDELAESANYAEE 278
FDAKADE IFLGYS SKAYR+ NKRT+V EES+HVVFDE N E+ + ++
Sbjct: 371 FDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLTELLDQ 430
Query: 277 SL 272
SL
Sbjct: 431 SL 432
Score = 27.3 bits (59), Expect(2) = 3e-13
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -2
Query: 204 ESLQLNEDEEAVQDNLAARRLNPA-DLLQPDVRWLRDHPPELIIGDVRDGIRTRSRAQHE 28
+SL NE E +++ + + + L + R RD + IIG++ G+ TRS ++
Sbjct: 430 QSLLENEPNEVPKESESHEKAKETCEQLPKEWRTSRDLSMDNIIGNIGKGVSTRSAIKNI 489
Query: 27 AMFTCFISQ 1
F+SQ
Sbjct: 490 CNTMAFVSQ 498
>emb|CAN77969.1| hypothetical protein VITISV_027333 [Vitis vinifera]
Length = 559
Score = 67.4 bits (163), Expect(2) = 3e-13
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIDEL 305
FDAK+D GIFLGYS SK +RV NKRTMV EESIHV+F E N + + D L
Sbjct: 370 FDAKSDVGIFLGYSTSSKVFRVFNKRTMVVEESIHVIFYESNNSFQKRDSL 420
Score = 34.3 bits (77), Expect(2) = 3e-13
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = -2
Query: 237 EDEIAESQRQLESLQLNEDEEAVQDNLAARRLNPADLLQPDVRWLRDHPPELIIGDVRDG 58
++EI E ++ ES + VQ P+ L D +++ +HP IIG+ G
Sbjct: 441 QEEIGEDPKKKESPLALPPPQQVQGE-------PSQDLPKDWKFVINHPQYQIIGNPSSG 493
Query: 57 IRTRSRAQHEAMFTCFISQ 1
+RTRS ++ FISQ
Sbjct: 494 VRTRSSLRNICNNLAFISQ 512
>emb|CAN81433.1| hypothetical protein VITISV_010698 [Vitis vinifera]
Length = 574
Score = 67.0 bits (162), Expect(2) = 4e-13
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPN 332
FDAK D GIFLGYS SKA+RV NKRTMV EESIHV+F E N
Sbjct: 385 FDAKLDVGIFLGYSTSSKAFRVFNKRTMVVEESIHVIFYESN 426
Score = 34.3 bits (77), Expect(2) = 4e-13
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = -2
Query: 237 EDEIAESQRQLESLQLNEDEEAVQDNLAARRLNPADLLQPDVRWLRDHPPELIIGDVRDG 58
++EI E ++ ES + VQ + L D +++ +HPP IIG+ G
Sbjct: 456 QEEIVEDPKKEESPLALPPPQQVQGKSSQD-------LPKDWKFVINHPPNHIIGNPSSG 508
Query: 57 IRTRSRAQHEAMFTCFISQ 1
+RTRS ++ FISQ
Sbjct: 509 VRTRSSLRNICNNLAFISQ 527
>gb|KYP35691.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan] gi|1012326694|gb|KYP38474.1| Retrovirus-related
Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]
Length = 1482
Score = 75.5 bits (184), Expect = 4e-13
Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNV-----NGEDIDELAESA 293
FDAKADEG+F+GYSA SKAYRV NK T+ EESIHV FDE N+ + D DE+ +S
Sbjct: 850 FDAKADEGVFIGYSAISKAYRVFNKSTLSVEESIHVTFDETNILEKGKSLNDEDEIGDSI 909
Query: 292 NYAEESL 272
EE L
Sbjct: 910 TQEEEKL 916
>gb|KYP37030.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan] gi|1012344001|gb|KYP55193.1| Retrovirus-related
Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]
Length = 1530
Score = 75.5 bits (184), Expect = 4e-13
Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNV-----NGEDIDELAESA 293
FDAKADEG+F+GYSA SKAYRV NK T+ EESIHV FDE N+ + D DE+ +S
Sbjct: 898 FDAKADEGVFIGYSAISKAYRVFNKSTLSVEESIHVTFDETNILEKGKSLNDEDEIGDSI 957
Query: 292 NYAEESL 272
EE L
Sbjct: 958 TQEEEKL 964
>gb|KYP69244.1| Copia protein, partial [Cajanus cajan]
Length = 118
Score = 70.5 bits (171), Expect = 6e-13
Identities = 33/59 (55%), Positives = 41/59 (69%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIDELAESANYAE 281
FDAK DE IFLGYS SKAYRV NKRT++ EES+HVVFDE N E+ + ++ +
Sbjct: 60 FDAKIDEAIFLGYSKNSKAYRVYNKRTLIVEESVHVVFDETNKQETKQTEIKDLTDFLD 118
>gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1564
Score = 73.9 bits (180), Expect(2) = 6e-13
Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 6/61 (9%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPN------VNGEDIDELAES 296
FDAKADE IFLGYS SKAYR+ NKRT+V EES+HVVFDE N ED++EL +
Sbjct: 925 FDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLNELLDQ 984
Query: 295 A 293
+
Sbjct: 985 S 985
Score = 26.6 bits (57), Expect(2) = 6e-13
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -2
Query: 204 ESLQLNEDEEAVQDNLAARRLNPA-DLLQPDVRWLRDHPPELIIGDVRDGIRTRSRAQHE 28
+SL NE E +++ + + + L + + RD + IIG++ G+ TRS ++
Sbjct: 984 QSLLENEPNEVPKESESLEKAKETCEQLPKEWKTSRDLSMDNIIGNIGKGVSTRSAIKNI 1043
Query: 27 AMFTCFISQ 1
F+SQ
Sbjct: 1044 CNTMAFVSQ 1052
>gb|KYP31883.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1016
Score = 74.7 bits (182), Expect = 7e-13
Identities = 36/66 (54%), Positives = 46/66 (69%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIDELAESANYAEE 278
FDAKADE IFLGYS SKAYR+ NKRT+V EES+HVVFDE N + E+ + + ++
Sbjct: 931 FDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDETNKQETEQTEIEDLTDLLDQ 990
Query: 277 SLC*SR 260
L S+
Sbjct: 991 PLLESK 996
>gb|KYP38726.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 749
Score = 73.9 bits (180), Expect(2) = 8e-13
Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 6/61 (9%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPN------VNGEDIDELAES 296
FDAKADE IFLGYS SKAYR+ NKRT+V EES+HVVFDE N ED++EL +
Sbjct: 110 FDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLNELLDQ 169
Query: 295 A 293
+
Sbjct: 170 S 170
Score = 26.2 bits (56), Expect(2) = 8e-13
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -2
Query: 204 ESLQLNEDEEAVQDNLAARRLNPA-DLLQPDVRWLRDHPPELIIGDVRDGIRTRSRAQHE 28
+SL NE E +++ + + + L + + RD + IIG++ G+ TRS ++
Sbjct: 169 QSLLENEPNEVPKESESHEKAKETCEQLPKEWKTSRDLSMDNIIGNIGKGVSTRSAIKNI 228
Query: 27 AMFTCFISQ 1
F+SQ
Sbjct: 229 CNTMAFVSQ 237
>gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1533
Score = 73.9 bits (180), Expect(2) = 1e-12
Identities = 36/62 (58%), Positives = 43/62 (69%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIDELAESANYAEE 278
FDAKADE IFLGYS SKAYR+ NKRT+V EES+HVVFDE N E+ + ++
Sbjct: 894 FDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEVEDLTELLDQ 953
Query: 277 SL 272
SL
Sbjct: 954 SL 955
Score = 25.8 bits (55), Expect(2) = 1e-12
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -2
Query: 204 ESLQLNEDEEAVQDNLA-ARRLNPADLLQPDVRWLRDHPPELIIGDVRDGIRTRSRAQHE 28
+SL NE + +++ + ++ + L + + RD + IIG + G+ TRS ++
Sbjct: 953 QSLLENEPNDVSKESESHVKQKETCEQLPKEWKTTRDLSMDNIIGSIGKGVSTRSAIKNI 1012
Query: 27 AMFTCFISQ 1
F+SQ
Sbjct: 1013 CNTMAFVSQ 1021
>gb|KYP41260.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 831
Score = 73.9 bits (180), Expect = 1e-12
Identities = 37/56 (66%), Positives = 43/56 (76%), Gaps = 3/56 (5%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNV---NGEDIDELAE 299
FDAK+DEGIFLGYS SK+YR+ NKRTM EESIHVVFDE N+ + IDE+ E
Sbjct: 83 FDAKSDEGIFLGYSLNSKSYRIYNKRTMTIEESIHVVFDETNLICPRKDIIDEIVE 138
>gb|KYP30912.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 766
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIDELAE 299
FDAK+D+G F+GYS SKAYRV N RT+V EESIHV F++ ++ +L +
Sbjct: 167 FDAKSDKGFFIGYSETSKAYRVYNSRTLVVEESIHVKFNDKKETDRELSDLED 219
Score = 36.2 bits (82), Expect(2) = 1e-12
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = -2
Query: 255 RALNPDEDEIAESQRQLESLQLNED-EEAVQDNLAARRLNPADLLQP---DVRWLRDHPP 88
R L+ ED+ A + + +E EA + L + D++ P + R+ HP
Sbjct: 212 RELSDLEDDFAGMELNTHDSRKDEQVSEASSEPLQTNVESQTDMIPPHKSEWRYKSHHPK 271
Query: 87 ELIIGDVRDGIRTRSRAQH 31
E IIG +G++TRS+ +H
Sbjct: 272 EQIIGSTSEGVKTRSKFRH 290
>gb|KYP33249.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1010
Score = 73.9 bits (180), Expect = 1e-12
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIDELAESANYAEE 278
FDAKADE IFLGYS SKAYRV NKRT+V EES+HVVFDE N E+ + ++ ++
Sbjct: 371 FDAKADEAIFLGYSTNSKAYRVYNKRTLVVEESVHVVFDETNKQETKKTEIEDLTDFLDQ 430
>gb|KYP33754.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1011
Score = 73.9 bits (180), Expect = 1e-12
Identities = 37/57 (64%), Positives = 44/57 (77%), Gaps = 3/57 (5%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNV---NGEDIDELAES 296
FDAK+DEGIFLGYS SK++R+ NKRTM EESIHVVFDE N+ + IDE+ ES
Sbjct: 368 FDAKSDEGIFLGYSLNSKSFRIYNKRTMTIEESIHVVFDETNLVCPRRDIIDEIVES 424
>gb|KYP64004.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1021
Score = 73.9 bits (180), Expect = 1e-12
Identities = 37/57 (64%), Positives = 44/57 (77%), Gaps = 3/57 (5%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNV---NGEDIDELAES 296
FDAK+DEGIFLGYS SK++R+ NKRTM EESIHVVFDE N+ + IDE+ ES
Sbjct: 378 FDAKSDEGIFLGYSLNSKSFRIYNKRTMTIEESIHVVFDETNLVCPRRDIIDEIVES 434
>gb|KYP60252.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 237
Score = 72.0 bits (175), Expect = 1e-12
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPN 332
FDAKADE IFLGYS SKAYRV NKRT++ EES+HVVFDE N
Sbjct: 152 FDAKADEAIFLGYSTNSKAYRVYNKRTLIDEESVHVVFDETN 193
>gb|ABD63167.1| Zinc knuckle family protein [Asparagus officinalis]
Length = 583
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 29/46 (63%), Positives = 36/46 (78%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGE 320
FD+K D GIFLGY+ SKAYRV NKR++V EESI+V FDE N+ +
Sbjct: 379 FDSKIDVGIFLGYAPRSKAYRVFNKRSLVVEESINVTFDETNIGSQ 424
Score = 34.3 bits (77), Expect(2) = 2e-12
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -2
Query: 243 PDEDEIAESQRQLESLQLNEDEEAVQDNLAARRLNPADLLQPDVRW--LRDHPPELIIGD 70
P +D+ + + L+ LQ+N D +++ N + ++P W +HP E IIG
Sbjct: 428 PRKDDDDDIEGGLDLLQIN-DTPSIEVQKDVDSTNAQEQVEPPKAWKFTSNHPKEQIIGS 486
Query: 69 VRDGIRTRSRAQHE 28
G+ TRS+A E
Sbjct: 487 PSKGVITRSKALSE 500
>ref|XP_012572855.1| PREDICTED: uncharacterized protein LOC105852349 [Cicer arietinum]
Length = 225
Score = 67.8 bits (164), Expect(2) = 2e-12
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGED 317
FD KADEGIF+GYS SKA+R+ NKRT++ EES+HV FDE N ED
Sbjct: 17 FDEKADEGIFIGYSLSSKAFRIFNKRTLLVEESMHVSFDETNPLKED 63
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = -2
Query: 255 RALNPDEDEIAESQRQLESLQLNEDEEAVQDN-LAARRLNPADLLQPDVRWLRDHPPELI 79
+ ++ D+D+ + + N+D++ QDN ++ ++ + D L + R RD+ E I
Sbjct: 64 KIISYDDDDFISNDTSKD----NQDDQQNQDNEVSNQQQDQNDNLPKEWRTHRDNLIENI 119
Query: 78 IGDVRDGIRTRSRAQHEAMFTCF 10
IGD+ + TR + Q + F
Sbjct: 120 IGDINQRVTTRLKLQDACLNMAF 142
>gb|KYP50151.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1006
Score = 73.6 bits (179), Expect = 2e-12
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIDELAE 299
FDAKADE IFLGYS SK+YR+ NKRT+V EES+HVVFDE N E I++L E
Sbjct: 371 FDAKADEAIFLGYSTNSKSYRIYNKRTLVVEESVHVVFDESNKQTE-IEDLTE 422
>ref|XP_013445390.1| hypothetical protein MTR_8g058870 [Medicago truncatula]
gi|657373805|gb|KEH19416.1| hypothetical protein
MTR_8g058870 [Medicago truncatula]
Length = 114
Score = 68.9 bits (167), Expect = 2e-12
Identities = 36/63 (57%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Frame = -1
Query: 457 FDAKADEGIFLGYSAESKAYRVLNKRTMVTEESIHVVFDE---PNVNGEDIDELAESANY 287
FDAK D+GIFLGYS+ SKAYRV NKRT+ EESIHV FDE V ID E
Sbjct: 21 FDAKVDDGIFLGYSSNSKAYRVFNKRTLTVEESIHVAFDEKPSQEVGKAKIDSHGEQGTR 80
Query: 286 AEE 278
+E
Sbjct: 81 RDE 83