BLASTX nr result
ID: Rehmannia27_contig00028315
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00028315
(435 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011085692.1| PREDICTED: ribosome biogenesis protein wdr12... 134 1e-34
ref|XP_010029382.1| PREDICTED: ribosome biogenesis protein WDR12... 128 1e-32
ref|XP_012840586.1| PREDICTED: LOW QUALITY PROTEIN: ribosome bio... 128 1e-32
gb|EYU34608.1| hypothetical protein MIMGU_mgv1a017726mg [Erythra... 128 1e-32
ref|XP_007215408.1| hypothetical protein PRUPE_ppa005967mg [Prun... 127 2e-32
ref|XP_010258084.1| PREDICTED: ribosome biogenesis protein wdr12... 127 2e-32
emb|CDP02312.1| unnamed protein product [Coffea canephora] 127 4e-32
emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera] 126 5e-32
ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12... 126 5e-32
ref|XP_007032738.1| Transducin/WD40 repeat-like superfamily prot... 124 7e-32
ref|XP_010549998.1| PREDICTED: ribosome biogenesis protein WDR12... 126 7e-32
ref|XP_007032736.1| Transducin/WD40 repeat-like superfamily prot... 124 1e-31
ref|NP_974784.1| WD-40 repeat family protein [Arabidopsis thalia... 124 2e-31
ref|XP_012075022.1| PREDICTED: ribosome biogenesis protein WDR12... 120 3e-31
ref|XP_010453693.1| PREDICTED: ribosome biogenesis protein WDR12... 124 4e-31
ref|NP_197059.1| WD-40 repeat family protein [Arabidopsis thalia... 124 4e-31
ref|XP_007032734.1| Transducin/WD40 repeat-like superfamily prot... 124 4e-31
ref|XP_004489459.1| PREDICTED: ribosome biogenesis protein WDR12... 124 4e-31
ref|XP_010492399.1| PREDICTED: ribosome biogenesis protein WDR12... 124 5e-31
ref|XP_010420221.1| PREDICTED: ribosome biogenesis protein WDR12... 124 5e-31
>ref|XP_011085692.1| PREDICTED: ribosome biogenesis protein wdr12 [Sesamum indicum]
Length = 441
Score = 134 bits (336), Expect = 1e-34
Identities = 60/66 (90%), Positives = 64/66 (96%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSV WPQRGTI+SASWDHS+RRWDVETGKDSL+IFCGK INCLDIGGESSALIAAGGSD
Sbjct: 283 VSSVTWPQRGTIFSASWDHSIRRWDVETGKDSLSIFCGKVINCLDIGGESSALIAAGGSD 342
Query: 182 PVIRIW 199
PV+RIW
Sbjct: 343 PVLRIW 348
Score = 65.9 bits (159), Expect = 6e-10
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISVQ 398
HKDKVLCADWWK DSV+SGGADSKL ISSGI VQ
Sbjct: 408 HKDKVLCADWWKDDSVVSGGADSKLCISSGILVQ 441
>ref|XP_010029382.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Eucalyptus
grandis] gi|629090030|gb|KCW56283.1| hypothetical
protein EUGRSUZ_I02026 [Eucalyptus grandis]
Length = 434
Score = 128 bits (322), Expect = 1e-32
Identities = 56/66 (84%), Positives = 61/66 (92%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSV+WPQ TIYSASWDHSVRRWDVETGKD LNIFCGK +NCLD+GGE SALIAAGGSD
Sbjct: 277 VSSVIWPQAETIYSASWDHSVRRWDVETGKDMLNIFCGKVLNCLDVGGEGSALIAAGGSD 336
Query: 182 PVIRIW 199
P++RIW
Sbjct: 337 PILRIW 342
Score = 58.5 bits (140), Expect = 2e-07
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISV 395
H+DKV CADWW+ D V+SGG DSKLRISSGI +
Sbjct: 402 HEDKVFCADWWRGDCVVSGGMDSKLRISSGIPI 434
>ref|XP_012840586.1| PREDICTED: LOW QUALITY PROTEIN: ribosome biogenesis protein WDR12
homolog [Erythranthe guttata]
Length = 442
Score = 128 bits (322), Expect = 1e-32
Identities = 58/66 (87%), Positives = 63/66 (95%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSV+WPQR TIYSASWDHS+RRWDVETGKDSL++ CGK INCLDIGGESSALIAAGGSD
Sbjct: 283 VSSVMWPQRETIYSASWDHSIRRWDVETGKDSLSMSCGKVINCLDIGGESSALIAAGGSD 342
Query: 182 PVIRIW 199
PV+RIW
Sbjct: 343 PVLRIW 348
Score = 65.5 bits (158), Expect = 8e-10
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISV 395
HKDKVLCADWW+ DSV+SGGADSKL ISSGISV
Sbjct: 408 HKDKVLCADWWREDSVVSGGADSKLCISSGISV 440
>gb|EYU34608.1| hypothetical protein MIMGU_mgv1a017726mg [Erythranthe guttata]
Length = 448
Score = 128 bits (322), Expect = 1e-32
Identities = 58/66 (87%), Positives = 63/66 (95%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSV+WPQR TIYSASWDHS+RRWDVETGKDSL++ CGK INCLDIGGESSALIAAGGSD
Sbjct: 289 VSSVMWPQRETIYSASWDHSIRRWDVETGKDSLSMSCGKVINCLDIGGESSALIAAGGSD 348
Query: 182 PVIRIW 199
PV+RIW
Sbjct: 349 PVLRIW 354
Score = 65.5 bits (158), Expect = 8e-10
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISV 395
HKDKVLCADWW+ DSV+SGGADSKL ISSGISV
Sbjct: 414 HKDKVLCADWWREDSVVSGGADSKLCISSGISV 446
>ref|XP_007215408.1| hypothetical protein PRUPE_ppa005967mg [Prunus persica]
gi|462411558|gb|EMJ16607.1| hypothetical protein
PRUPE_ppa005967mg [Prunus persica]
Length = 435
Score = 127 bits (320), Expect = 2e-32
Identities = 55/66 (83%), Positives = 63/66 (95%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSV WP+R TIYSASWDHS+RRW+ ETGKDSLNIFCGKA+NCLDIGGESSAL+AAGGSD
Sbjct: 277 VSSVKWPERETIYSASWDHSIRRWNAETGKDSLNIFCGKALNCLDIGGESSALVAAGGSD 336
Query: 182 PVIRIW 199
P+++IW
Sbjct: 337 PILKIW 342
Score = 55.8 bits (133), Expect = 2e-06
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISV 395
HKDK LCADWW+ ++V+SGGADSKL ++SG SV
Sbjct: 402 HKDKALCADWWRGETVLSGGADSKLCMTSGASV 434
>ref|XP_010258084.1| PREDICTED: ribosome biogenesis protein wdr12 [Nelumbo nucifera]
gi|720006756|ref|XP_010258085.1| PREDICTED: ribosome
biogenesis protein wdr12 [Nelumbo nucifera]
Length = 439
Score = 127 bits (320), Expect = 2e-32
Identities = 55/66 (83%), Positives = 63/66 (95%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSVVWP+ TIYSASWDHS+RRWDVETGKDSL++FCGK +NCLD+GGESSALIAAGGSD
Sbjct: 281 VSSVVWPEHVTIYSASWDHSIRRWDVETGKDSLDMFCGKVLNCLDVGGESSALIAAGGSD 340
Query: 182 PVIRIW 199
P++RIW
Sbjct: 341 PILRIW 346
Score = 67.0 bits (162), Expect = 2e-10
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISVQ 398
HKDKVLCADWWK DSVISGGADSKL ISSGIS++
Sbjct: 406 HKDKVLCADWWKSDSVISGGADSKLCISSGISIE 439
>emb|CDP02312.1| unnamed protein product [Coffea canephora]
Length = 436
Score = 127 bits (318), Expect = 4e-32
Identities = 53/66 (80%), Positives = 63/66 (95%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSVVWP+ T+YSASWDHS+RRWDVETGKDS+N++CGK INCLD+GGESS+LIAAGGSD
Sbjct: 278 VSSVVWPEHETLYSASWDHSIRRWDVETGKDSMNMYCGKVINCLDVGGESSSLIAAGGSD 337
Query: 182 PVIRIW 199
P++RIW
Sbjct: 338 PILRIW 343
Score = 58.2 bits (139), Expect = 3e-07
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISV 395
H+DKVLCADWWK + VISGGADSKL ISS ISV
Sbjct: 403 HEDKVLCADWWKSNCVISGGADSKLCISSEISV 435
>emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]
Length = 427
Score = 126 bits (317), Expect = 5e-32
Identities = 56/66 (84%), Positives = 61/66 (92%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSV+WPQ TIYSASWDHSVRRWDVETGKDS N+FCGKA+NCLD+GGESSALIAAGGSD
Sbjct: 269 VSSVIWPQHETIYSASWDHSVRRWDVETGKDSWNLFCGKALNCLDVGGESSALIAAGGSD 328
Query: 182 PVIRIW 199
+RIW
Sbjct: 329 TTLRIW 334
Score = 58.9 bits (141), Expect = 1e-07
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISVQ 398
H +KVLCADWWK DSV+SGGADSKL ISS I VQ
Sbjct: 394 HNNKVLCADWWKGDSVVSGGADSKLCISSEIPVQ 427
>ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Vitis
vinifera] gi|731418302|ref|XP_010660625.1| PREDICTED:
ribosome biogenesis protein WDR12 homolog [Vitis
vinifera] gi|296082215|emb|CBI21220.3| unnamed protein
product [Vitis vinifera]
Length = 438
Score = 126 bits (317), Expect = 5e-32
Identities = 56/66 (84%), Positives = 61/66 (92%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSV+WPQ TIYSASWDHSVRRWDVETGKDS N+FCGKA+NCLD+GGESSALIAAGGSD
Sbjct: 280 VSSVIWPQHETIYSASWDHSVRRWDVETGKDSWNLFCGKALNCLDVGGESSALIAAGGSD 339
Query: 182 PVIRIW 199
+RIW
Sbjct: 340 TTLRIW 345
Score = 58.9 bits (141), Expect = 1e-07
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISVQ 398
H +KVLCADWWK DSV+SGGADSKL ISS I VQ
Sbjct: 405 HNNKVLCADWWKGDSVVSGGADSKLCISSEIPVQ 438
>ref|XP_007032738.1| Transducin/WD40 repeat-like superfamily protein isoform 5
[Theobroma cacao] gi|508711767|gb|EOY03664.1|
Transducin/WD40 repeat-like superfamily protein isoform
5 [Theobroma cacao]
Length = 329
Score = 124 bits (311), Expect = 7e-32
Identities = 54/66 (81%), Positives = 60/66 (90%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSVVWPQ TIYSASWDHSVR+WDVETGKD NIFCGK +NC+D+GGE SALIAAGGSD
Sbjct: 203 VSSVVWPQHETIYSASWDHSVRQWDVETGKDLSNIFCGKVLNCIDVGGEGSALIAAGGSD 262
Query: 182 PVIRIW 199
P++RIW
Sbjct: 263 PILRIW 268
>ref|XP_010549998.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Tarenaya
hassleriana]
Length = 434
Score = 126 bits (316), Expect = 7e-32
Identities = 53/66 (80%), Positives = 63/66 (95%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSVVWP+ TIYSASWDHSVRRWD+ETGKDSLN+FCGKA+N +D+GGESSAL+AAGGSD
Sbjct: 276 VSSVVWPEHETIYSASWDHSVRRWDIETGKDSLNLFCGKALNSVDVGGESSALVAAGGSD 335
Query: 182 PVIRIW 199
P++R+W
Sbjct: 336 PILRVW 341
Score = 63.9 bits (154), Expect = 3e-09
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISVQ 398
HKDKVL ADWWK DSVISGGADSKLRISS IS+Q
Sbjct: 401 HKDKVLSADWWKGDSVISGGADSKLRISSEISIQ 434
>ref|XP_007032736.1| Transducin/WD40 repeat-like superfamily protein isoform 3
[Theobroma cacao] gi|590650814|ref|XP_007032737.1|
Transducin/WD40 repeat-like superfamily protein isoform
3 [Theobroma cacao] gi|508711765|gb|EOY03662.1|
Transducin/WD40 repeat-like superfamily protein isoform
3 [Theobroma cacao] gi|508711766|gb|EOY03663.1|
Transducin/WD40 repeat-like superfamily protein isoform
3 [Theobroma cacao]
Length = 361
Score = 124 bits (311), Expect = 1e-31
Identities = 54/66 (81%), Positives = 60/66 (90%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSVVWPQ TIYSASWDHSVR+WDVETGKD NIFCGK +NC+D+GGE SALIAAGGSD
Sbjct: 203 VSSVVWPQHETIYSASWDHSVRQWDVETGKDLSNIFCGKVLNCIDVGGEGSALIAAGGSD 262
Query: 182 PVIRIW 199
P++RIW
Sbjct: 263 PILRIW 268
Score = 59.7 bits (143), Expect = 7e-08
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISV 395
HKDKVLCADWWK DSV+SGG D++LRI S IS+
Sbjct: 328 HKDKVLCADWWKGDSVVSGGVDAQLRICSDISI 360
>ref|NP_974784.1| WD-40 repeat family protein [Arabidopsis thaliana]
gi|332004794|gb|AED92177.1| WD-40 repeat family protein
[Arabidopsis thaliana]
Length = 402
Score = 124 bits (311), Expect = 2e-31
Identities = 53/66 (80%), Positives = 62/66 (93%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSVVWP+ IYS+SWDHSVRRWDVETGKDSLN+FCGKA+N +D+GGESSALIAAGGSD
Sbjct: 275 VSSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGESSALIAAGGSD 334
Query: 182 PVIRIW 199
P++R+W
Sbjct: 335 PILRVW 340
>ref|XP_012075022.1| PREDICTED: ribosome biogenesis protein WDR12-like, partial
[Jatropha curcas]
Length = 259
Score = 120 bits (302), Expect = 3e-31
Identities = 53/66 (80%), Positives = 60/66 (90%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VS+VVWP+R TIYSASWDHS+RRWDVETGKDS IFCGKA+NC+ IGGE SALIAAGGSD
Sbjct: 101 VSAVVWPERETIYSASWDHSIRRWDVETGKDSSKIFCGKALNCVHIGGEGSALIAAGGSD 160
Query: 182 PVIRIW 199
++RIW
Sbjct: 161 AILRIW 166
Score = 58.5 bits (140), Expect = 1e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISV 395
H+DKVLCADWWK DSVISGG D KL ISS IS+
Sbjct: 226 HEDKVLCADWWKSDSVISGGVDCKLCISSDISI 258
>ref|XP_010453693.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Camelina
sativa]
Length = 433
Score = 124 bits (311), Expect = 4e-31
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSVVWP+ IYSASWDHSVRRWDVETGKDSLN+FCGKA+N +D+GGE SALIAAGGSD
Sbjct: 275 VSSVVWPEHDVIYSASWDHSVRRWDVETGKDSLNLFCGKALNTIDVGGEGSALIAAGGSD 334
Query: 182 PVIRIW 199
P++R+W
Sbjct: 335 PILRVW 340
Score = 57.4 bits (137), Expect = 5e-07
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISV 395
H DKVL ADWWK ++VISGGADS LRISSGI++
Sbjct: 400 HNDKVLSADWWKGENVISGGADSNLRISSGIAI 432
>ref|NP_197059.1| WD-40 repeat family protein [Arabidopsis thaliana]
gi|9755810|emb|CAC01754.1| putative protein [Arabidopsis
thaliana] gi|17381110|gb|AAL36367.1| unknown protein
[Arabidopsis thaliana] gi|20258961|gb|AAM14196.1|
unknown protein [Arabidopsis thaliana]
gi|332004793|gb|AED92176.1| WD-40 repeat family protein
[Arabidopsis thaliana]
Length = 433
Score = 124 bits (311), Expect = 4e-31
Identities = 53/66 (80%), Positives = 62/66 (93%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSVVWP+ IYS+SWDHSVRRWDVETGKDSLN+FCGKA+N +D+GGESSALIAAGGSD
Sbjct: 275 VSSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGESSALIAAGGSD 334
Query: 182 PVIRIW 199
P++R+W
Sbjct: 335 PILRVW 340
Score = 58.2 bits (139), Expect = 3e-07
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISV 395
H DKVL ADWWK +SV+SGGADS LRISSGI++
Sbjct: 400 HNDKVLSADWWKGESVVSGGADSNLRISSGIAI 432
>ref|XP_007032734.1| Transducin/WD40 repeat-like superfamily protein isoform 1
[Theobroma cacao] gi|590650808|ref|XP_007032735.1|
Transducin/WD40 repeat-like superfamily protein isoform
1 [Theobroma cacao] gi|508711763|gb|EOY03660.1|
Transducin/WD40 repeat-like superfamily protein isoform
1 [Theobroma cacao] gi|508711764|gb|EOY03661.1|
Transducin/WD40 repeat-like superfamily protein isoform
1 [Theobroma cacao]
Length = 436
Score = 124 bits (311), Expect = 4e-31
Identities = 54/66 (81%), Positives = 60/66 (90%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSVVWPQ TIYSASWDHSVR+WDVETGKD NIFCGK +NC+D+GGE SALIAAGGSD
Sbjct: 278 VSSVVWPQHETIYSASWDHSVRQWDVETGKDLSNIFCGKVLNCIDVGGEGSALIAAGGSD 337
Query: 182 PVIRIW 199
P++RIW
Sbjct: 338 PILRIW 343
Score = 59.7 bits (143), Expect = 8e-08
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISV 395
HKDKVLCADWWK DSV+SGG D++LRI S IS+
Sbjct: 403 HKDKVLCADWWKGDSVVSGGVDAQLRICSDISI 435
>ref|XP_004489459.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Cicer
arietinum]
Length = 439
Score = 124 bits (311), Expect = 4e-31
Identities = 55/66 (83%), Positives = 62/66 (93%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSVVWPQR +IYSASWDHS+R+WDVETGK+ +IFCGKA+NCLDIGGE SALIAAGGSD
Sbjct: 281 VSSVVWPQRESIYSASWDHSIRKWDVETGKNLSDIFCGKALNCLDIGGEGSALIAAGGSD 340
Query: 182 PVIRIW 199
PV+RIW
Sbjct: 341 PVVRIW 346
Score = 57.4 bits (137), Expect = 5e-07
Identities = 28/34 (82%), Positives = 28/34 (82%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISVQ 398
H DKVL ADWWK DSVISGGADSKL ISS I VQ
Sbjct: 406 HSDKVLSADWWKGDSVISGGADSKLCISSEIPVQ 439
>ref|XP_010492399.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Camelina
sativa]
Length = 433
Score = 124 bits (310), Expect = 5e-31
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSVVWP+ IYSASWDHSVRRWDVETGKDSLN+FCGKA+N +D+GGE SALIAAGGSD
Sbjct: 275 VSSVVWPEHDVIYSASWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGEGSALIAAGGSD 334
Query: 182 PVIRIW 199
P++R+W
Sbjct: 335 PILRVW 340
Score = 57.4 bits (137), Expect = 5e-07
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISV 395
H DKVL ADWWK ++VISGGADS LRISSGI++
Sbjct: 400 HNDKVLSADWWKGENVISGGADSNLRISSGIAI 432
>ref|XP_010420221.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Camelina
sativa]
Length = 433
Score = 124 bits (310), Expect = 5e-31
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +2
Query: 2 VSSVVWPQRGTIYSASWDHSVRRWDVETGKDSLNIFCGKAINCLDIGGESSALIAAGGSD 181
VSSVVWP+ IYSASWDHSVRRWDVETGKDSLN+FCGKA+N +D+GGE SALIAAGGSD
Sbjct: 275 VSSVVWPEHDVIYSASWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGEGSALIAAGGSD 334
Query: 182 PVIRIW 199
P++R+W
Sbjct: 335 PILRVW 340
Score = 57.4 bits (137), Expect = 5e-07
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +3
Query: 297 HKDKVLCADWWKHDSVISGGADSKLRISSGISV 395
H DKVL ADWWK ++VISGGADS LRISSGI++
Sbjct: 400 HNDKVLSADWWKGENVISGGADSNLRISSGIAI 432