BLASTX nr result

ID: Rehmannia27_contig00028270 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00028270
         (407 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011098529.1| PREDICTED: chloroplastic group IIA intron sp...   146   3e-38
ref|XP_012849118.1| PREDICTED: chloroplastic group IIA intron sp...   131   6e-33

>ref|XP_011098529.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Sesamum indicum]
          Length = 1054

 Score =  146 bits (368), Expect = 3e-38
 Identities = 84/137 (61%), Positives = 98/137 (71%), Gaps = 3/137 (2%)
 Frame = -3

Query: 402  SKGSVDSSQQPLRGDVSSQSVVKGNYLFSTTKADLQPRSLPKETRGFLNINEQ--NVELS 229
            +K S D  QQ   G VS  S VKGNYLF TT+ +LQPRSLP+ET+G L+INEQ  ++ELS
Sbjct: 800  AKDSEDIVQQDSSGYVSLHSAVKGNYLFETTEEELQPRSLPQETKGLLSINEQSGHIELS 859

Query: 228  HSPRSQYRASSSTTSYIPPHAGGRGSNGAGNQNAKFEPSVQKA-NERPLVRPSRALQLSN 52
             S R Q R SSSTT+ I  H GGR S+  G QN + EPSV+KA +E     P RALQLSN
Sbjct: 860  SSLRFQDRTSSSTTTCIQSHTGGRDSSTGGFQNVELEPSVKKALSEATAAMPFRALQLSN 919

Query: 51   RERLLLRKQALKMKNIP 1
            RERLLLRKQALKMK +P
Sbjct: 920  RERLLLRKQALKMKKLP 936


>ref|XP_012849118.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Erythranthe guttata]
            gi|604346236|gb|EYU44699.1| hypothetical protein
            MIMGU_mgv1a000630mg [Erythranthe guttata]
          Length = 1040

 Score =  131 bits (329), Expect = 6e-33
 Identities = 75/137 (54%), Positives = 94/137 (68%), Gaps = 3/137 (2%)
 Frame = -3

Query: 402  SKGSVDSSQQPLRGDVSSQSVVKGNYLFSTTKADLQPRSLPKETRGFLNINEQ--NVELS 229
            S+ +V  +Q+ L GDVS QS VK NYLF TT+A++QP SL  E   F + N Q  N+E  
Sbjct: 769  SEDTVHIAQKDLPGDVSLQSEVKVNYLFETTEAEVQPTSLSNEGNSFSDKNNQIGNMEFV 828

Query: 228  HSPRSQYRASSSTTSYIPPHAGGRGSNGAGNQNAKFEPSVQKA-NERPLVRPSRALQLSN 52
             SPRSQ R +SS ++YI P  G R S+G G +N   EPS QK   ERP + PSR++QLSN
Sbjct: 829  RSPRSQDRRNSSPSTYIRPQTGRRKSDGGGYRNVDIEPSGQKPMKERPSLMPSRSVQLSN 888

Query: 51   RERLLLRKQALKMKNIP 1
            +ERLLLRKQAL+MK IP
Sbjct: 889  KERLLLRKQALRMKKIP 905


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