BLASTX nr result

ID: Rehmannia27_contig00028101 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00028101
         (537 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011085431.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    69   1e-10
ref|XP_012833943.1| PREDICTED: E3 ubiquitin-protein ligase ATL4 ...    64   6e-09
ref|XP_011093982.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    57   1e-06
ref|XP_006354641.1| PREDICTED: E3 ubiquitin-protein ligase ATL4 ...    55   7e-06
ref|XP_015072154.1| PREDICTED: E3 ubiquitin-protein ligase ATL4 ...    55   7e-06

>ref|XP_011085431.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Sesamum indicum]
          Length = 364

 Score = 68.6 bits (166), Expect = 1e-10
 Identities = 43/86 (50%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
 Frame = -3

Query: 535 SVGISIP---AEALAAEVSGRRNWL----DRLAXXXXXXXXXXXXXXXXXXXXXXXXSEA 377
           S+GI IP    E +AAEVSG RNWL    DRLA                        ++ 
Sbjct: 279 SIGIPIPEPPGEVIAAEVSGGRNWLRDYVDRLASVSISSRAMSFRSSGRFFSGSSRRTDP 338

Query: 376 VVVPEDLEAYRVGEEISEIFRWLSGI 299
           VV PEDLEA RVGEEISE+FRWLSGI
Sbjct: 339 VVSPEDLEANRVGEEISELFRWLSGI 364


>ref|XP_012833943.1| PREDICTED: E3 ubiquitin-protein ligase ATL4 [Erythranthe guttata]
           gi|604340917|gb|EYU40326.1| hypothetical protein
           MIMGU_mgv1a025580mg [Erythranthe guttata]
          Length = 349

 Score = 63.9 bits (154), Expect = 6e-09
 Identities = 41/86 (47%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
 Frame = -3

Query: 535 SVGISIP---AEALAAEVSGRRNWL----DRLAXXXXXXXXXXXXXXXXXXXXXXXXSEA 377
           SVGI +P    EALAAEVS  RNWL    DRLA                        ++ 
Sbjct: 264 SVGIQMPDPPGEALAAEVSSGRNWLRDYVDRLASVSISSRAMSFRSSGRFFSGSSRRTDP 323

Query: 376 VVVPEDLEAYRVGEEISEIFRWLSGI 299
           V   EDLEA RVGEEISE+FRWLSG+
Sbjct: 324 VAAAEDLEANRVGEEISELFRWLSGV 349


>ref|XP_011093982.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Sesamum indicum]
          Length = 357

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/75 (49%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
 Frame = -3

Query: 511 EALAAEVSGRRNWL----DRLAXXXXXXXXXXXXXXXXXXXXXXXXS-EAVVVPEDLEAY 347
           + LAAEVSG RNWL    DRLA                          +A VVP DLEA 
Sbjct: 282 DILAAEVSGGRNWLREYVDRLAPVSFSSRAMSFRSSGRFFSGNSSRRGDAAVVPRDLEAN 341

Query: 346 RVGEEISEIFRWLSG 302
           RVGEEISE+FRWLSG
Sbjct: 342 RVGEEISELFRWLSG 356


>ref|XP_006354641.1| PREDICTED: E3 ubiquitin-protein ligase ATL4 [Solanum tuberosum]
          Length = 366

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
 Frame = -3

Query: 535 SVGISIPA---EALAAEVSGR-RNWL----DRLAXXXXXXXXXXXXXXXXXXXXXXXXSE 380
           S+G+ IPA   E++A++VSG  R+WL    DR+A                        S+
Sbjct: 280 SIGVPIPAPPGESIASDVSGGGRSWLRDYVDRIASLSLSSRSVSFRSSGRFFNGSSRRSD 339

Query: 379 AVVVPEDLEAYRVGEEISEIFRWLSGI 299
            VV  +DLEA RVGEEISE+FRWLSG+
Sbjct: 340 TVVPIDDLEAGRVGEEISELFRWLSGV 366


>ref|XP_015072154.1| PREDICTED: E3 ubiquitin-protein ligase ATL4 [Solanum pennellii]
          Length = 367

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
 Frame = -3

Query: 535 SVGISIPA---EALAAEVSGR-RNWL----DRLAXXXXXXXXXXXXXXXXXXXXXXXXSE 380
           S+G+ IPA   E++A++VSG  R+WL    DR+A                        S+
Sbjct: 281 SIGVPIPAPPGESIASDVSGGGRSWLRDYVDRIASLSLSSRSVSFRSSGRFFSGSSRRSD 340

Query: 379 AVVVPEDLEAYRVGEEISEIFRWLSGI 299
            VV  +DLEA RVGEEISE+FRWLSG+
Sbjct: 341 TVVPIDDLEAGRVGEEISELFRWLSGV 367


Top