BLASTX nr result
ID: Rehmannia27_contig00028019
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00028019
(1179 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011087804.1| PREDICTED: pentatricopeptide repeat-containi... 389 e-128
ref|XP_012828447.1| PREDICTED: pentatricopeptide repeat-containi... 385 e-127
gb|KCW79406.1| hypothetical protein EUGRSUZ_C00814 [Eucalyptus g... 295 3e-93
ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi... 297 9e-93
ref|XP_009783824.1| PREDICTED: pentatricopeptide repeat-containi... 296 2e-92
ref|XP_015889017.1| PREDICTED: pentatricopeptide repeat-containi... 297 4e-92
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi... 295 1e-91
gb|EPS73770.1| hypothetical protein M569_00985 [Genlisea aurea] 286 1e-91
ref|XP_009337222.1| PREDICTED: pentatricopeptide repeat-containi... 296 1e-91
ref|XP_010047479.1| PREDICTED: pentatricopeptide repeat-containi... 295 2e-91
ref|XP_015062668.1| PREDICTED: pentatricopeptide repeat-containi... 293 6e-91
ref|XP_008242241.1| PREDICTED: pentatricopeptide repeat-containi... 294 6e-91
ref|XP_008388776.1| PREDICTED: pentatricopeptide repeat-containi... 293 8e-91
ref|XP_009359734.1| PREDICTED: pentatricopeptide repeat-containi... 289 2e-89
ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containi... 287 2e-88
ref|XP_009615517.1| PREDICTED: pentatricopeptide repeat-containi... 286 2e-88
ref|XP_015062693.1| PREDICTED: pentatricopeptide repeat-containi... 284 6e-88
gb|KDO73910.1| hypothetical protein CISIN_1g007640mg [Citrus sin... 286 8e-88
ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citr... 285 1e-87
ref|XP_008337852.1| PREDICTED: pentatricopeptide repeat-containi... 285 2e-87
>ref|XP_011087804.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum] gi|747081065|ref|XP_011087805.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Sesamum indicum]
gi|747081067|ref|XP_011087806.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum] gi|747081069|ref|XP_011087807.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Sesamum indicum]
gi|747081071|ref|XP_011087808.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum] gi|747081073|ref|XP_011087809.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Sesamum indicum]
gi|747081075|ref|XP_011087810.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum]
Length = 552
Score = 389 bits (999), Expect = e-128
Identities = 190/230 (82%), Positives = 205/230 (89%)
Frame = +1
Query: 1 LFTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLG 180
LFTFN IIDGFGKKG+VA ALKMYERMV+ GFHPDVVTFTSLID YCR GELEQ M L
Sbjct: 323 LFTFNVIIDGFGKKGKVASALKMYERMVNCGFHPDVVTFTSLIDCYCRRGELEQGMKLWD 382
Query: 181 EMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
EMNERKV PN FTFSILI++LCKENRLNEARDLLRQL WREDIVPPPFIYNPVIDGFCKA
Sbjct: 383 EMNERKVSPNAFTFSILITSLCKENRLNEARDLLRQLNWREDIVPPPFIYNPVIDGFCKA 442
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
GN+DEANAIV EME KGC+HDKMTFTILILGHCMKGRM EAIGMYNKMLS+GCAPDNITI
Sbjct: 443 GNIDEANAIVKEMEMKGCVHDKMTFTILILGHCMKGRMFEAIGMYNKMLSIGCAPDNITI 502
Query: 541 SSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVAV 690
SSL+SCLRKAGMA EANEI++KA N +H G S +RT +R NM++TVAV
Sbjct: 503 SSLISCLRKAGMAREANEIQEKASNVVHLGSLSSERTGPIRTNMDITVAV 552
Score = 111 bits (277), Expect = 3e-23
Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 2/191 (1%)
Frame = +1
Query: 88 GGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEMNERKVPPNVFTFSILISALCKENRLNE 267
G F PD +F +I G CR+G+++ + L M P++ T++ LI+ C+ ++
Sbjct: 211 GSFCPDTQSFNIVIKGLCRVGKVDTAFEFLDVMRSFSCHPDLVTYNTLINGFCRVGHMDR 270
Query: 268 ARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGNVDEANAIVAEMEAKGCIHDKMTFTILI 447
A +LLR++K + P Y VI G+C++G ++EA A+ EM G + TF ++I
Sbjct: 271 AEELLREVKPQSGFSPDVVTYTSVISGYCRSGKMEEAAALFDEMINYGTRPNLFTFNVII 330
Query: 448 LGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQ--KALNSM 621
G KG++ A+ MY +M++ G PD +T +SL+ C + G E+EQ K + M
Sbjct: 331 DGFGKKGKVASALKMYERMVNCGFHPDVVTFTSLIDCYCRRG------ELEQGMKLWDEM 384
Query: 622 HSGLSSPQRTT 654
+ SP T
Sbjct: 385 NERKVSPNAFT 395
Score = 103 bits (258), Expect = 1e-20
Identities = 62/198 (31%), Positives = 108/198 (54%), Gaps = 1/198 (0%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
+FN +I G + G+V A + + M S HPD+VT+ +LI+G+CR+G ++++ LL E+
Sbjct: 219 SFNIVIKGLCRVGKVDTAFEFLDVMRSFSCHPDLVTYNTLINGFCRVGHMDRAEELLREV 278
Query: 187 NERK-VPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAG 363
+ P+V T++ +IS C+ ++ EA L ++ P F +N +IDGF K G
Sbjct: 279 KPQSGFSPDVVTYTSVISGYCRSGKMEEAAALFDEM-INYGTRPNLFTFNVIIDGFGKKG 337
Query: 364 NVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITIS 543
V A + M G D +TFT LI +C +G + + + ++++M +P+ T S
Sbjct: 338 KVASALKMYERMVNCGFHPDVVTFTSLIDCYCRRGELEQGMKLWDEMNERKVSPNAFTFS 397
Query: 544 SLVSCLRKAGMALEANEI 597
L++ L K EA ++
Sbjct: 398 ILITSLCKENRLNEARDL 415
>ref|XP_012828447.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Erythranthe guttata] gi|848930449|ref|XP_012828448.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Erythranthe guttata]
gi|604298483|gb|EYU18527.1| hypothetical protein
MIMGU_mgv1a003955mg [Erythranthe guttata]
Length = 552
Score = 385 bits (990), Expect = e-127
Identities = 191/230 (83%), Positives = 207/230 (90%)
Frame = +1
Query: 1 LFTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLG 180
LFTFN IIDGFGKKGEVA A KMYERM + GF PDVVTFTSLIDG+CR G+L Q ++LL
Sbjct: 326 LFTFNAIIDGFGKKGEVASASKMYERMTATGFRPDVVTFTSLIDGHCRCGDLGQGIHLLN 385
Query: 181 EMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
EMNE++V PNVFTFS+LISALCKENRLNEARDLL QLKWREDIVPPPF+YNPVIDG+CKA
Sbjct: 386 EMNEKRVSPNVFTFSVLISALCKENRLNEARDLLNQLKWREDIVPPPFVYNPVIDGYCKA 445
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
GNVDEANAIVAEMEAKGC+HDKMTFTILILGHCMKGRM EAIGMYNKMLSVGC PDNIT+
Sbjct: 446 GNVDEANAIVAEMEAKGCVHDKMTFTILILGHCMKGRMFEAIGMYNKMLSVGCVPDNITM 505
Query: 541 SSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVAV 690
SSL+SCLRKAGMA EANEIEQKAL S+ SS +R+ VRNNMNVTVAV
Sbjct: 506 SSLISCLRKAGMAREANEIEQKALFSVS---SSSKRSNPVRNNMNVTVAV 552
Score = 105 bits (263), Expect = 2e-21
Identities = 65/198 (32%), Positives = 108/198 (54%), Gaps = 1/198 (0%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
+FN ++ G + +V A + ++ M S PD+VT+ +LI+G CR+G+++++ LL E+
Sbjct: 222 SFNIVMRGLCRASKVDKAFEFFDVMRSFSCSPDLVTYNTLINGLCRVGKVDRAEELLREI 281
Query: 187 N-ERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAG 363
+ + +V T++ +IS CK + + A L ++ I P F +N +IDGF K G
Sbjct: 282 KVQSEFSADVVTYTSVISGYCKLGKTDAAAFLFEEMI-NNGIRPNLFTFNAIIDGFGKKG 340
Query: 364 NVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITIS 543
V A+ + M A G D +TFT LI GHC G + + I + N+M +P+ T S
Sbjct: 341 EVASASKMYERMTATGFRPDVVTFTSLIDGHCRCGDLGQGIHLLNEMNEKRVSPNVFTFS 400
Query: 544 SLVSCLRKAGMALEANEI 597
L+S L K EA ++
Sbjct: 401 VLISALCKENRLNEARDL 418
Score = 94.4 bits (233), Expect = 2e-17
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMVSG--GFHPDVVTFTSLIDGYCRLGELEQSMNLL 177
F +N + K + A+ ++ + F PD +F ++ G CR +++++
Sbjct: 184 FVYNNFLSMLTNKNRIDDAVLFFKSHILRLKSFCPDTCSFNIVMRGLCRASKVDKAFEFF 243
Query: 178 GEMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCK 357
M P++ T++ LI+ LC+ +++ A +LLR++K + + Y VI G+CK
Sbjct: 244 DVMRSFSCSPDLVTYNTLINGLCRVGKVDRAEELLREIKVQSEFSADVVTYTSVISGYCK 303
Query: 358 AGNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNIT 537
G D A + EM G + TF +I G KG + A MY +M + G PD +T
Sbjct: 304 LGKTDAAAFLFEEMINNGIRPNLFTFNAIIDGFGKKGEVASASKMYERMTATGFRPDVVT 363
Query: 538 ISSLV 552
+SL+
Sbjct: 364 FTSLI 368
Score = 65.5 bits (158), Expect = 5e-08
Identities = 35/138 (25%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Frame = +1
Query: 205 PNVFTFSILISALCKENRLNEAR---DLLRQLKWREDIVPPPFIYNPVIDGFCKAGNVDE 375
P+ +F+I++ LC+ +++++A D++R D+V YN +I+G C+ G VD
Sbjct: 218 PDTCSFNIVMRGLCRASKVDKAFEFFDVMRSFSCSPDLVT----YNTLINGLCRVGKVDR 273
Query: 376 ANAIVAEMEAKGCIH-DKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLV 552
A ++ E++ + D +T+T +I G+C G+ A ++ +M++ G P+ T ++++
Sbjct: 274 AEELLREIKVQSEFSADVVTYTSVISGYCKLGKTDAAAFLFEEMINNGIRPNLFTFNAII 333
Query: 553 SCLRKAGMALEANEIEQK 606
K G A+++ ++
Sbjct: 334 DGFGKKGEVASASKMYER 351
>gb|KCW79406.1| hypothetical protein EUGRSUZ_C00814 [Eucalyptus grandis]
Length = 435
Score = 295 bits (755), Expect = 3e-93
Identities = 143/228 (62%), Positives = 181/228 (79%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
TFN +I+GFGK G ++ AL MY++M+S G +PDVVTFTSLIDG+CR+G++ + + L M
Sbjct: 209 TFNVLINGFGKAGNMSSALSMYDKMLSVGCYPDVVTFTSLIDGHCRVGQVNEGLKLWRLM 268
Query: 187 NERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGN 366
+ R + PN +TFS+LI+ LCK+NRL++AR+ LRQL+W DIVP PFIYNPV+DGFCKAGN
Sbjct: 269 SARNISPNAYTFSVLINTLCKDNRLHDARECLRQLRWT-DIVPKPFIYNPVMDGFCKAGN 327
Query: 367 VDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISS 546
VDEAN I+AEME KGC DK+TFTILI+GHCMKGRM+EA+ +YNKMLSVGCAPD+IT++S
Sbjct: 328 VDEANIILAEMEEKGCRPDKLTFTILIIGHCMKGRMMEAMRIYNKMLSVGCAPDSITVNS 387
Query: 547 LVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVAV 690
VSCL KAGMA EA I Q AL ++ GLSS R N ++ VAV
Sbjct: 388 FVSCLLKAGMANEAFHIRQTALEGLNLGLSSLNRAVPATMNADILVAV 435
Score = 119 bits (298), Expect = 2e-26
Identities = 63/191 (32%), Positives = 103/191 (53%)
Frame = +1
Query: 13 NCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEMNE 192
N I++ + +V A+ +++ + PD T LI G CR+ E++++ L +M
Sbjct: 70 NTILNLLVNRDQVHQAISLFKEHLLLHASPDTWTLNILIRGLCRVREIDKAFQLFNDMGS 129
Query: 193 RKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGNVD 372
P++ TF+ LI+ LC+ ++ LL++++ R D+ P Y VI G CK G ++
Sbjct: 130 FGCSPDIVTFNTLINGLCRVKEIDRGHHLLKEVQSRCDVSPDVVTYTSVISGCCKLGRME 189
Query: 373 EANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLV 552
EA+ + EM + G +TF +LI G G M A+ MY+KMLSVGC PD +T +SL+
Sbjct: 190 EASLLFEEMNSSGIRPSTVTFNVLINGFGKAGNMSSALSMYDKMLSVGCYPDVVTFTSLI 249
Query: 553 SCLRKAGMALE 585
+ G E
Sbjct: 250 DGHCRVGQVNE 260
Score = 119 bits (297), Expect = 3e-26
Identities = 70/198 (35%), Positives = 113/198 (57%), Gaps = 1/198 (0%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGE 183
+T N +I G + E+ A +++ M S G PD+VTF +LI+G CR+ E+++ +LL E
Sbjct: 102 WTLNILIRGLCRVREIDKAFQLFNDMGSFGCSPDIVTFNTLINGLCRVKEIDRGHHLLKE 161
Query: 184 MNER-KVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
+ R V P+V T++ +IS CK R+ EA L ++ I P +N +I+GF KA
Sbjct: 162 VQSRCDVSPDVVTYTSVISGCCKLGRMEEASLLFEEMN-SSGIRPSTVTFNVLINGFGKA 220
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
GN+ A ++ +M + GC D +TFT LI GHC G++ E + ++ M + +P+ T
Sbjct: 221 GNMSSALSMYDKMLSVGCYPDVVTFTSLIDGHCRVGQVNEGLKLWRLMSARNISPNAYTF 280
Query: 541 SSLVSCLRKAGMALEANE 594
S L++ L K +A E
Sbjct: 281 SVLINTLCKDNRLHDARE 298
Score = 67.8 bits (164), Expect = 7e-09
Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
Frame = +1
Query: 151 ELEQSMNLLGEMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIY 330
++ Q+++L E P+ +T +ILI LC+ +++A L + P +
Sbjct: 81 QVHQAISLFKEHLLLHASPDTWTLNILIRGLCRVREIDKAFQLFNDMG-SFGCSPDIVTF 139
Query: 331 NPVIDGFCKAGNVDEANAIVAEMEAKGCIH-DKMTFTILILGHCMKGRMVEAIGMYNKML 507
N +I+G C+ +D + ++ E++++ + D +T+T +I G C GRM EA ++ +M
Sbjct: 140 NTLINGLCRVKEIDRGHHLLKEVQSRCDVSPDVVTYTSVISGCCKLGRMEEASLLFEEMN 199
Query: 508 SVGCAPDNITISSLVSCLRKAGMALEANEIEQKALN 615
S G P +T + L++ KAG A + K L+
Sbjct: 200 SSGIRPSTVTFNVLINGFGKAGNMSSALSMYDKMLS 235
>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Solanum tuberosum] gi|565370447|ref|XP_006351832.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Solanum tuberosum]
Length = 550
Score = 297 bits (761), Expect = 9e-93
Identities = 142/230 (61%), Positives = 183/230 (79%)
Frame = +1
Query: 1 LFTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLG 180
L TFN +I+GFGK G++ A++MY RM + G+ PDVVTFTSLIDGYCR GEL+Q + L
Sbjct: 321 LVTFNILINGFGKIGDMFSAIQMYGRMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWD 380
Query: 181 EMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
EMN R + PN++TFSILISAL KENRLNEAR+LLRQLK R+DIVP PF+YNPV+DGFCKA
Sbjct: 381 EMNTRNLSPNLYTFSILISALSKENRLNEARELLRQLKSRDDIVPQPFVYNPVLDGFCKA 440
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
GN+ +AN I AEME++GC HDK+TFTILILGHCMKGRM+EA+ +++KMLS+GC PD+IT+
Sbjct: 441 GNLSKANVIAAEMESRGCCHDKITFTILILGHCMKGRMLEAMAIFDKMLSLGCVPDDITV 500
Query: 541 SSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVAV 690
S L SCL KAGM EA ++ ++ LSS +++ R ++++ VAV
Sbjct: 501 SCLTSCLLKAGMVKEAYKVRLTPSKDLNPDLSSSKQSVPFRTSLDIPVAV 550
Score = 110 bits (274), Expect = 9e-23
Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 2/192 (1%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMV--SGGFHPDVVTFTSLIDGYCRLGELEQSMNLL 177
F N ++ K+ V A+ ++ + S PD TF ++I G CR+G ++++
Sbjct: 179 FVHNSLLSLLMKRSRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFF 238
Query: 178 GEMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCK 357
+M P+ T++ LI+ LC ++N AR LL L+ ++ + P Y VI G+CK
Sbjct: 239 NDMGSFGCFPDTVTYNTLINGLCSVGQVNRARGLLGNLELQDGLSPDVVTYTSVIAGYCK 298
Query: 358 AGNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNIT 537
G +DEA ++ EM G + +TF ILI G G M AI MY +M +VG PD +T
Sbjct: 299 LGRMDEAINLMDEMTTYGISPNLVTFNILINGFGKIGDMFSAIQMYGRMCAVGYPPDVVT 358
Query: 538 ISSLVSCLRKAG 573
+SL+ + G
Sbjct: 359 FTSLIDGYCRTG 370
>ref|XP_009783824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Nicotiana sylvestris] gi|698470503|ref|XP_009783825.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Nicotiana sylvestris]
gi|698470507|ref|XP_009783826.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana sylvestris] gi|698470511|ref|XP_009783827.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Nicotiana sylvestris]
Length = 546
Score = 296 bits (759), Expect = 2e-92
Identities = 142/230 (61%), Positives = 182/230 (79%)
Frame = +1
Query: 1 LFTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLG 180
+ TFN +I+GFGK G++ A MYERM + G PDVVTFTSLIDG+CR G+L+Q + L
Sbjct: 317 MVTFNILINGFGKIGDMFSAQNMYERMCAFGCPPDVVTFTSLIDGHCRTGDLDQGLRLWD 376
Query: 181 EMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
EMN R + PN++TFS+LI AL +ENRLNEAR+LLRQL R+DIVP PF+YNPV+DGFCKA
Sbjct: 377 EMNTRNLWPNLYTFSVLIGALSRENRLNEARELLRQLILRDDIVPQPFVYNPVLDGFCKA 436
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
GN++EAN I AEME+KGC HDK TFTILILGHCMKGRM+EA+ +Y+KM+S+GCAPD+IT+
Sbjct: 437 GNLNEANVIAAEMESKGCCHDKFTFTILILGHCMKGRMLEAMAIYDKMMSLGCAPDDITV 496
Query: 541 SSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVAV 690
S L SCL KAGMA EA ++ + +HS LSS +++ R +++ VAV
Sbjct: 497 SCLTSCLLKAGMAKEAYKVRLTSPKDLHSDLSSSKQSVPFRTRLDIPVAV 546
Score = 108 bits (270), Expect = 3e-22
Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 2/185 (1%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMV--SGGFHPDVVTFTSLIDGYCRLGELEQSMNLL 177
F N ++ K+ +V A+ ++ + S PD TF +I G CR+G ++++
Sbjct: 175 FVHNSLLSLLMKRNQVDEAVDFFKDHILRSERLFPDTCTFNIVIRGLCRVGGVDKAFEFF 234
Query: 178 GEMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCK 357
+M P++ T++ LI+ LC +++ AR LLR L+ ++ P Y VI G+CK
Sbjct: 235 NDMGSFDCFPDIVTYNTLINGLCGVGQVDRARSLLRSLELQDGYSPDVVTYTSVISGYCK 294
Query: 358 AGNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNIT 537
G +D+A ++ EM G +TF ILI G G M A MY +M + GC PD +T
Sbjct: 295 LGRMDDAINLMDEMITYGITPTMVTFNILINGFGKIGDMFSAQNMYERMCAFGCPPDVVT 354
Query: 538 ISSLV 552
+SL+
Sbjct: 355 FTSLI 359
Score = 74.7 bits (182), Expect = 5e-11
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 3/176 (1%)
Frame = +1
Query: 88 GGFHPDVVTFTSLIDGYCRLGELEQSMNLLGE--MNERKVPPNVFTFSILISALCKENRL 261
G F SL+ + +++++++ + + ++ P+ TF+I+I LC+ +
Sbjct: 168 GSFVVRPFVHNSLLSLLMKRNQVDEAVDFFKDHILRSERLFPDTCTFNIVIRGLCRVGGV 227
Query: 262 NEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGNVDEANAIVAEMEAK-GCIHDKMTFT 438
++A + + D P YN +I+G C G VD A +++ +E + G D +T+T
Sbjct: 228 DKAFEFFNDMG-SFDCFPDIVTYNTLINGLCGVGQVDRARSLLRSLELQDGYSPDVVTYT 286
Query: 439 ILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQK 606
+I G+C GRM +AI + ++M++ G P +T + L++ K G A + ++
Sbjct: 287 SVISGYCKLGRMDDAINLMDEMITYGITPTMVTFNILINGFGKIGDMFSAQNMYER 342
>ref|XP_015889017.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Ziziphus jujuba]
Length = 595
Score = 297 bits (760), Expect = 4e-92
Identities = 151/228 (66%), Positives = 178/228 (78%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
TFN +IDGFGK GE+A AL MYE+MVS G+ PDVVTFTSLI+GYCR G+L +NL EM
Sbjct: 370 TFNALIDGFGKAGELASALAMYEKMVSHGYQPDVVTFTSLINGYCRAGQLSHGLNLWHEM 429
Query: 187 NERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGN 366
N +K+ PN +TF++LI ALCK+NRL+EARD LRQLKW +IVP PF+YNPVIDGFCKAGN
Sbjct: 430 NAKKIFPNGYTFNVLIHALCKDNRLDEARDFLRQLKW-SNIVPKPFMYNPVIDGFCKAGN 488
Query: 367 VDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISS 546
VDEAN IVAEME KGC DK TFTILILG+CMKGRM EAI ++ KML+VGCAPD IT+S
Sbjct: 489 VDEANIIVAEMEEKGCRPDKCTFTILILGNCMKGRMFEAIDLFKKMLAVGCAPDYITVSC 548
Query: 547 LVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVAV 690
L+SCL KAGM EA I++ A ++ G SS RT R N + VAV
Sbjct: 549 LISCLLKAGMPNEAYHIKKTASEDLNLG-SSSLRTVHSRANAEIPVAV 595
Score = 119 bits (297), Expect = 1e-25
Identities = 58/188 (30%), Positives = 107/188 (56%)
Frame = +1
Query: 10 FNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEMN 189
+N ++ ++ +V A+ ++ + V+ F PD T +L+ G C +GE++++ +M
Sbjct: 230 YNSLLSVLVRRNQVDEAVSLFRKFVASHFRPDNWTCNTLVKGLCGVGEVDKAFEFFNDMG 289
Query: 190 ERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGNV 369
P+V T++ LI+ LC+ N +++ LL++++ R ++ P + VI G+CK G +
Sbjct: 290 SFGCSPDVVTYNTLINGLCRTNEVDKGCRLLKEVQLRRELSPNVITFTSVISGYCKLGRM 349
Query: 370 DEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSL 549
DEA+ + EM + G + +TF LI G G + A+ MY KM+S G PD +T +SL
Sbjct: 350 DEASILFDEMCSSGVKPNDVTFNALIDGFGKAGELASALAMYEKMVSHGYQPDVVTFTSL 409
Query: 550 VSCLRKAG 573
++ +AG
Sbjct: 410 INGYCRAG 417
Score = 113 bits (282), Expect = 9e-24
Identities = 68/198 (34%), Positives = 109/198 (55%), Gaps = 1/198 (0%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGE 183
+T N ++ G GEV A + + M S G PDVVT+ +LI+G CR E+++ LL E
Sbjct: 263 WTCNTLVKGLCGVGEVDKAFEFFNDMGSFGCSPDVVTYNTLINGLCRTNEVDKGCRLLKE 322
Query: 184 MN-ERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
+ R++ PNV TF+ +IS CK R++EA L ++ + P +N +IDGF KA
Sbjct: 323 VQLRRELSPNVITFTSVISGYCKLGRMDEASILFDEM-CSSGVKPNDVTFNALIDGFGKA 381
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
G + A A+ +M + G D +TFT LI G+C G++ + ++++M + P+ T
Sbjct: 382 GELASALAMYEKMVSHGYQPDVVTFTSLINGYCRAGQLSHGLNLWHEMNAKKIFPNGYTF 441
Query: 541 SSLVSCLRKAGMALEANE 594
+ L+ L K EA +
Sbjct: 442 NVLIHALCKDNRLDEARD 459
Score = 79.0 bits (193), Expect = 2e-12
Identities = 48/200 (24%), Positives = 102/200 (51%), Gaps = 1/200 (0%)
Frame = +1
Query: 19 IIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEMNERK 198
++ + + G++ A+KM E + VV + SL+ R +++++++L +
Sbjct: 198 LVVSYAQIGKLDIAVKMLEEVHCDAVKVAVVVYNSLLSVLVRRNQVDEAVSLFRKFVASH 257
Query: 199 VPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGNVDEA 378
P+ +T + L+ LC +++A + + P YN +I+G C+ VD+
Sbjct: 258 FRPDNWTCNTLVKGLCGVGEVDKAFEFFNDMG-SFGCSPDVVTYNTLINGLCRTNEVDKG 316
Query: 379 NAIVAEMEAKGCIHDKM-TFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVS 555
++ E++ + + + TFT +I G+C GRM EA ++++M S G P+++T ++L+
Sbjct: 317 CRLLKEVQLRRELSPNVITFTSVISGYCKLGRMDEASILFDEMCSSGVKPNDVTFNALID 376
Query: 556 CLRKAGMALEANEIEQKALN 615
KAG A + +K ++
Sbjct: 377 GFGKAGELASALAMYEKMVS 396
>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Solanum lycopersicum] gi|723664227|ref|XP_010315007.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Solanum lycopersicum]
Length = 550
Score = 295 bits (754), Expect = 1e-91
Identities = 142/230 (61%), Positives = 180/230 (78%)
Frame = +1
Query: 1 LFTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLG 180
L TFN +I+GFGK G++ A+KMY +M + G+ PDVVTFTSLIDGYCR GEL+Q + L
Sbjct: 321 LVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWD 380
Query: 181 EMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
+MN R + PN++TFS+LISAL KENRLNEAR+LLRQLK R+DIVP PF+YNPV+DGFCKA
Sbjct: 381 DMNSRNLSPNLYTFSVLISALSKENRLNEARELLRQLKSRDDIVPQPFVYNPVLDGFCKA 440
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
GN+ EAN I AEME+KGC HDK+TFTILILGHCMKGRM+EA+ +++KMLS+GC PD+ITI
Sbjct: 441 GNLSEANVIAAEMESKGCCHDKITFTILILGHCMKGRMLEALAIFDKMLSLGCVPDDITI 500
Query: 541 SSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVAV 690
S L SCL KAGM EA ++ ++ LS + R ++++ VAV
Sbjct: 501 SCLTSCLLKAGMVKEAYKVRLIPSKDLNPDLSPSKLFIPFRTSLDIPVAV 550
Score = 109 bits (273), Expect = 1e-22
Identities = 68/198 (34%), Positives = 112/198 (56%), Gaps = 1/198 (0%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
TFN +I G + G V A + + M S G PD VT+ +LI+G C +G++ ++ LLG +
Sbjct: 217 TFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLLGNL 276
Query: 187 N-ERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAG 363
+ + P+V T++ LIS CK +R++EA +L+ ++ I P +N +I+GF K G
Sbjct: 277 QLQDGLSPDVVTYTSLISGYCKLSRMDEAINLMDEMI-TYGISPNLVTFNILINGFGKIG 335
Query: 364 NVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITIS 543
++ A + +M A G D +TFT LI G+C G + + + +++ M S +P+ T S
Sbjct: 336 DMFSAIKMYGKMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWDDMNSRNLSPNLYTFS 395
Query: 544 SLVSCLRKAGMALEANEI 597
L+S L K EA E+
Sbjct: 396 VLISALSKENRLNEAREL 413
Score = 107 bits (268), Expect = 5e-22
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 4/221 (1%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMV--SGGFHPDVVTFTSLIDGYCRLGELEQSMNLL 177
F N ++ K+ V A+ ++ + S PD TF ++I G CR+G ++++
Sbjct: 179 FVHNSLLSLLMKRSRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFF 238
Query: 178 GEMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCK 357
+M P+ T++ LI+ LC ++N A+ LL L+ ++ + P Y +I G+CK
Sbjct: 239 NDMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCK 298
Query: 358 AGNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNIT 537
+DEA ++ EM G + +TF ILI G G M AI MY KM +VG PD +T
Sbjct: 299 LSRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVT 358
Query: 538 ISSLVSCLRKAGMALEANEIEQ--KALNSMHSGLSSPQRTT 654
+SL+ + G E++Q K + M+S SP T
Sbjct: 359 FTSLIDGYCRTG------ELDQGLKLWDDMNSRNLSPNLYT 393
>gb|EPS73770.1| hypothetical protein M569_00985 [Genlisea aurea]
Length = 301
Score = 286 bits (732), Expect = 1e-91
Identities = 145/203 (71%), Positives = 166/203 (81%), Gaps = 3/203 (1%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGE 183
FTFN +IDGFGKKG++A A +++ RM S G PDV TFTSLIDG+CR GELE+ + L E
Sbjct: 93 FTFNALIDGFGKKGDLASASRVFSRMTSVGIRPDVFTFTSLIDGHCRHGELEEGLALFYE 152
Query: 184 MNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDI-VPPPFIYNPVIDGFCKA 360
M R+V P FT+S+LI+ALCKENRL EAR LLRQ+ REDI V PF+YNPVIDGFCK+
Sbjct: 153 MRSRQVLPTAFTYSVLIAALCKENRLMEARQLLRQMNGREDIPVALPFVYNPVIDGFCKS 212
Query: 361 GNVDEANAIVAEMEAKGC--IHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNI 534
GNVDEAN+IVAEMEAKGC HDKMTFTILILGHCMKGRMVEAI +Y KM+ VGC PD+I
Sbjct: 213 GNVDEANSIVAEMEAKGCSRAHDKMTFTILILGHCMKGRMVEAIRIYEKMVYVGCRPDDI 272
Query: 535 TISSLVSCLRKAGMALEANEIEQ 603
T S LVSCLRKAGMA EAN IE+
Sbjct: 273 TWSCLVSCLRKAGMAREANRIER 295
Score = 105 bits (262), Expect = 3e-22
Identities = 57/181 (31%), Positives = 99/181 (54%), Gaps = 1/181 (0%)
Frame = +1
Query: 58 ALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEMN-ERKVPPNVFTFSILI 234
AL+ ++ M PD+VTF +L+ G CR+G++ ++ LL + + + P+V T++ ++
Sbjct: 5 ALEFFDMMREFDCKPDIVTFNTLVSGMCRVGDVNRAKELLVSLKAQYGLLPDVVTYTAVV 64
Query: 235 SALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGNVDEANAIVAEMEAKGC 414
S LCK ++ A + ++ I P F +N +IDGF K G++ A+ + + M + G
Sbjct: 65 SGLCKSGNMDFAEAVFEEMSC-NGITPNSFTFNALIDGFGKKGDLASASRVFSRMTSVGI 123
Query: 415 IHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANE 594
D TFT LI GHC G + E + ++ +M S P T S L++ L K +EA +
Sbjct: 124 RPDVFTFTSLIDGHCRHGELEEGLALFYEMRSRQVLPTAFTYSVLIAALCKENRLMEARQ 183
Query: 595 I 597
+
Sbjct: 184 L 184
Score = 91.7 bits (226), Expect = 2e-17
Identities = 45/133 (33%), Positives = 74/133 (55%)
Frame = +1
Query: 154 LEQSMNLLGEMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYN 333
+++++ M E P++ TF+ L+S +C+ +N A++LL LK + ++P Y
Sbjct: 2 VDKALEFFDMMREFDCKPDIVTFNTLVSGMCRVGDVNRAKELLVSLKAQYGLLPDVVTYT 61
Query: 334 PVIDGFCKAGNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSV 513
V+ G CK+GN+D A A+ EM G + TF LI G KG + A ++++M SV
Sbjct: 62 AVVSGLCKSGNMDFAEAVFEEMSCNGITPNSFTFNALIDGFGKKGDLASASRVFSRMTSV 121
Query: 514 GCAPDNITISSLV 552
G PD T +SL+
Sbjct: 122 GIRPDVFTFTSLI 134
>ref|XP_009337222.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Pyrus x bretschneideri]
Length = 597
Score = 296 bits (757), Expect = 1e-91
Identities = 145/228 (63%), Positives = 180/228 (78%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
TFN +IDGFGK G + AL M+++M+ G+H DV TFTSLIDG+CR G+L Q + L EM
Sbjct: 371 TFNAMIDGFGKTGNMGSALAMHQKMLFHGYHSDVFTFTSLIDGHCRAGQLSQGLKLWQEM 430
Query: 187 NERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGN 366
N + V P+ +TFS+LI+ALC+E+RL+EARD LRQLKW ++VP PFIYNPVIDGFCKAGN
Sbjct: 431 NGKNVSPSAYTFSVLINALCRESRLHEARDFLRQLKW-SNVVPKPFIYNPVIDGFCKAGN 489
Query: 367 VDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISS 546
VDEANAIVAEME K C DK+TFTILILG+CMKGRM EAI + KML++GCAPDNIT++S
Sbjct: 490 VDEANAIVAEMEEKRCSPDKVTFTILILGNCMKGRMSEAISNFKKMLAIGCAPDNITVNS 549
Query: 547 LVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVAV 690
L SCL KAGMA EA+ I+Q A N ++SG+S RT ++ N + VAV
Sbjct: 550 LTSCLIKAGMANEAHHIKQIAYNDLNSGMSPTGRTDHMKANAQIPVAV 597
Score = 118 bits (295), Expect = 2e-25
Identities = 67/198 (33%), Positives = 109/198 (55%), Gaps = 1/198 (0%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGE 183
+TFN +I G + GE+ A +++ M S G +PD+VT+ +LI G CR E+++ LL E
Sbjct: 264 WTFNILIRGLCRVGEIDKAFELFSDMGSSGCYPDIVTYNTLISGLCRANEVDRGFQLLKE 323
Query: 184 MNER-KVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
+ R ++ P+V TF+ +IS CK ++ EA L ++ + P +N +IDGF K
Sbjct: 324 VQSRIELSPDVITFTSVISGYCKLGKMEEASVLFDEMI-SAGVRPTSVTFNAMIDGFGKT 382
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
GN+ A A+ +M G D TFT LI GHC G++ + + ++ +M +P T
Sbjct: 383 GNMGSALAMHQKMLFHGYHSDVFTFTSLIDGHCRAGQLSQGLKLWQEMNGKNVSPSAYTF 442
Query: 541 SSLVSCLRKAGMALEANE 594
S L++ L + EA +
Sbjct: 443 SVLINALCRESRLHEARD 460
Score = 114 bits (285), Expect = 4e-24
Identities = 61/201 (30%), Positives = 108/201 (53%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGE 183
F +N + + K+ +V A+ ++ + + HPD TF LI G CR+GE++++ L +
Sbjct: 229 FVYNNLFNVLVKQNKVDEAVSLFRKHMGSHCHPDNWTFNILIRGLCRVGEIDKAFELFSD 288
Query: 184 MNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAG 363
M P++ T++ LIS LC+ N ++ LL++++ R ++ P + VI G+CK G
Sbjct: 289 MGSSGCYPDIVTYNTLISGLCRANEVDRGFQLLKEVQSRIELSPDVITFTSVISGYCKLG 348
Query: 364 NVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITIS 543
++EA+ + EM + G +TF +I G G M A+ M+ KML G D T +
Sbjct: 349 KMEEASVLFDEMISAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKMLFHGYHSDVFTFT 408
Query: 544 SLVSCLRKAGMALEANEIEQK 606
SL+ +AG + ++ Q+
Sbjct: 409 SLIDGHCRAGQLSQGLKLWQE 429
Score = 85.5 bits (210), Expect = 2e-14
Identities = 60/242 (24%), Positives = 112/242 (46%), Gaps = 38/242 (15%)
Frame = +1
Query: 1 LFTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLG 180
++T+N ++ + G A +++ M S G PD L+ Y ++G+L+ + L
Sbjct: 158 VWTYNFLLRSLCQMGLQDSAKLVFDYMRSDGHTPDDSVVELLVSSYAQIGKLDDAEKFLD 217
Query: 181 EMN--ERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFC 354
E + E ++PP F ++ L + L K+N+++EA L R+ P + +N +I G C
Sbjct: 218 EAHCGEIRLPP--FVYNNLFNVLVKQNKVDEAVSLFRK-HMGSHCHPDNWTFNILIRGLC 274
Query: 355 KAGNVDEANAIVAEMEAKGCIHD------------------------------------K 426
+ G +D+A + ++M + GC D
Sbjct: 275 RVGEIDKAFELFSDMGSSGCYPDIVTYNTLISGLCRANEVDRGFQLLKEVQSRIELSPDV 334
Query: 427 MTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQK 606
+TFT +I G+C G+M EA ++++M+S G P ++T ++++ K G A + QK
Sbjct: 335 ITFTSVISGYCKLGKMEEASVLFDEMISAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQK 394
Query: 607 AL 612
L
Sbjct: 395 ML 396
Score = 75.1 bits (183), Expect = 4e-11
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 1/171 (0%)
Frame = +1
Query: 61 LKMYE-RMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEMNERKVPPNVFTFSILIS 237
LK +E VS V T+ L+ C++G + + + M P+ +L+S
Sbjct: 142 LKFFELSRVSLSVKHSVWTYNFLLRSLCQMGLQDSAKLVFDYMRSDGHTPDDSVVELLVS 201
Query: 238 ALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGNVDEANAIVAEMEAKGCI 417
+ + +L++A L + E I PPF+YN + + K VDEA ++ + C
Sbjct: 202 SYAQIGKLDDAEKFLDEAHCGE-IRLPPFVYNNLFNVLVKQNKVDEAVSLFRKHMGSHCH 260
Query: 418 HDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKA 570
D TF ILI G C G + +A +++ M S GC PD +T ++L+S L +A
Sbjct: 261 PDNWTFNILIRGLCRVGEIDKAFELFSDMGSSGCYPDIVTYNTLISGLCRA 311
>ref|XP_010047479.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Eucalyptus grandis]
Length = 598
Score = 295 bits (755), Expect = 2e-91
Identities = 143/228 (62%), Positives = 181/228 (79%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
TFN +I+GFGK G ++ AL MY++M+S G +PDVVTFTSLIDG+CR+G++ + + L M
Sbjct: 372 TFNVLINGFGKAGNMSSALSMYDKMLSVGCYPDVVTFTSLIDGHCRVGQVNEGLKLWRLM 431
Query: 187 NERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGN 366
+ R + PN +TFS+LI+ LCK+NRL++AR+ LRQL+W DIVP PFIYNPV+DGFCKAGN
Sbjct: 432 SARNISPNAYTFSVLINTLCKDNRLHDARECLRQLRWT-DIVPKPFIYNPVMDGFCKAGN 490
Query: 367 VDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISS 546
VDEAN I+AEME KGC DK+TFTILI+GHCMKGRM+EA+ +YNKMLSVGCAPD+IT++S
Sbjct: 491 VDEANIILAEMEEKGCRPDKLTFTILIIGHCMKGRMMEAMRIYNKMLSVGCAPDSITVNS 550
Query: 547 LVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVAV 690
VSCL KAGMA EA I Q AL ++ GLSS R N ++ VAV
Sbjct: 551 FVSCLLKAGMANEAFHIRQTALEGLNLGLSSLNRAVPATMNADILVAV 598
Score = 119 bits (298), Expect = 7e-26
Identities = 63/191 (32%), Positives = 103/191 (53%)
Frame = +1
Query: 13 NCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEMNE 192
N I++ + +V A+ +++ + PD T LI G CR+ E++++ L +M
Sbjct: 233 NTILNLLVNRDQVHQAISLFKEHLLLHASPDTWTLNILIRGLCRVREIDKAFQLFNDMGS 292
Query: 193 RKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGNVD 372
P++ TF+ LI+ LC+ ++ LL++++ R D+ P Y VI G CK G ++
Sbjct: 293 FGCSPDIVTFNTLINGLCRVKEIDRGHHLLKEVQSRCDVSPDVVTYTSVISGCCKLGRME 352
Query: 373 EANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLV 552
EA+ + EM + G +TF +LI G G M A+ MY+KMLSVGC PD +T +SL+
Sbjct: 353 EASLLFEEMNSSGIRPSTVTFNVLINGFGKAGNMSSALSMYDKMLSVGCYPDVVTFTSLI 412
Query: 553 SCLRKAGMALE 585
+ G E
Sbjct: 413 DGHCRVGQVNE 423
Score = 119 bits (297), Expect = 1e-25
Identities = 70/198 (35%), Positives = 113/198 (57%), Gaps = 1/198 (0%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGE 183
+T N +I G + E+ A +++ M S G PD+VTF +LI+G CR+ E+++ +LL E
Sbjct: 265 WTLNILIRGLCRVREIDKAFQLFNDMGSFGCSPDIVTFNTLINGLCRVKEIDRGHHLLKE 324
Query: 184 MNER-KVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
+ R V P+V T++ +IS CK R+ EA L ++ I P +N +I+GF KA
Sbjct: 325 VQSRCDVSPDVVTYTSVISGCCKLGRMEEASLLFEEMN-SSGIRPSTVTFNVLINGFGKA 383
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
GN+ A ++ +M + GC D +TFT LI GHC G++ E + ++ M + +P+ T
Sbjct: 384 GNMSSALSMYDKMLSVGCYPDVVTFTSLIDGHCRVGQVNEGLKLWRLMSARNISPNAYTF 443
Query: 541 SSLVSCLRKAGMALEANE 594
S L++ L K +A E
Sbjct: 444 SVLINTLCKDNRLHDARE 461
Score = 67.8 bits (164), Expect = 9e-09
Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
Frame = +1
Query: 151 ELEQSMNLLGEMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIY 330
++ Q+++L E P+ +T +ILI LC+ +++A L + P +
Sbjct: 244 QVHQAISLFKEHLLLHASPDTWTLNILIRGLCRVREIDKAFQLFNDMG-SFGCSPDIVTF 302
Query: 331 NPVIDGFCKAGNVDEANAIVAEMEAKGCIH-DKMTFTILILGHCMKGRMVEAIGMYNKML 507
N +I+G C+ +D + ++ E++++ + D +T+T +I G C GRM EA ++ +M
Sbjct: 303 NTLINGLCRVKEIDRGHHLLKEVQSRCDVSPDVVTYTSVISGCCKLGRMEEASLLFEEMN 362
Query: 508 SVGCAPDNITISSLVSCLRKAGMALEANEIEQKALN 615
S G P +T + L++ KAG A + K L+
Sbjct: 363 SSGIRPSTVTFNVLINGFGKAGNMSSALSMYDKMLS 398
>ref|XP_015062668.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
isoform X1 [Solanum pennellii]
gi|969996341|ref|XP_015062677.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Solanum pennellii]
gi|969996343|ref|XP_015062684.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Solanum pennellii]
Length = 552
Score = 293 bits (749), Expect = 6e-91
Identities = 138/230 (60%), Positives = 181/230 (78%)
Frame = +1
Query: 1 LFTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLG 180
L TFN +I+GFGK G++ A+KMY +M + G+ PDVVTFTSL+DGYCR GE++Q + L
Sbjct: 323 LVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLVDGYCRTGEVDQGLKLWD 382
Query: 181 EMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
+MN R + PN++T+S+LISAL KENRLNEAR+LLRQLK R+DIVP PF+YNPV+DGFCKA
Sbjct: 383 DMNSRNLSPNLYTYSVLISALSKENRLNEARELLRQLKSRDDIVPQPFLYNPVLDGFCKA 442
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
GN+ EAN I AEME+KGC HDK+TFTILILGHCMKGRM+EA+ +++KMLS+GC PD+IT+
Sbjct: 443 GNLSEANVIAAEMESKGCCHDKITFTILILGHCMKGRMLEALAIFDKMLSLGCVPDDITV 502
Query: 541 SSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVAV 690
S L SCL KAGM EA ++ ++ LS ++ R ++++ VAV
Sbjct: 503 SCLTSCLLKAGMVKEAYKVRLIPSKDLNPDLSPSKQFVPFRTSLDIPVAV 552
Score = 111 bits (278), Expect = 3e-23
Identities = 71/221 (32%), Positives = 113/221 (51%), Gaps = 4/221 (1%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMV--SGGFHPDVVTFTSLIDGYCRLGELEQSMNLL 177
F N ++ K+ V A+ ++ + S PD TF ++I G CR+G ++++
Sbjct: 181 FVHNSLLSLLMKRSRVDEAVDFFKHHILRSDRLFPDTCTFNTVIRGLCRVGGVDKAFEFF 240
Query: 178 GEMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCK 357
+M P+ T++ LI+ LC ++N A+ LL L+ ++ + P Y +I G+CK
Sbjct: 241 NDMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCK 300
Query: 358 AGNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNIT 537
G +DEA ++ EM + G + +TF ILI G G M AI MY KM +VG PD +T
Sbjct: 301 LGRMDEAINLMDEMISYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVT 360
Query: 538 ISSLVSCLRKAGMALEANEIEQ--KALNSMHSGLSSPQRTT 654
+SLV + G E++Q K + M+S SP T
Sbjct: 361 FTSLVDGYCRTG------EVDQGLKLWDDMNSRNLSPNLYT 395
Score = 108 bits (269), Expect = 4e-22
Identities = 67/198 (33%), Positives = 111/198 (56%), Gaps = 1/198 (0%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
TFN +I G + G V A + + M S G PD VT+ +LI+G C +G++ ++ LLG +
Sbjct: 219 TFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLLGNL 278
Query: 187 N-ERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAG 363
+ + P+V T++ LIS CK R++EA +L+ ++ I P +N +I+GF K G
Sbjct: 279 QLQDGLSPDVVTYTSLISGYCKLGRMDEAINLMDEMI-SYGISPNLVTFNILINGFGKIG 337
Query: 364 NVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITIS 543
++ A + +M A G D +TFT L+ G+C G + + + +++ M S +P+ T S
Sbjct: 338 DMFSAIKMYGKMCAVGYPPDVVTFTSLVDGYCRTGEVDQGLKLWDDMNSRNLSPNLYTYS 397
Query: 544 SLVSCLRKAGMALEANEI 597
L+S L K EA E+
Sbjct: 398 VLISALSKENRLNEAREL 415
>ref|XP_008242241.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Prunus mume]
Length = 595
Score = 294 bits (752), Expect = 6e-91
Identities = 142/228 (62%), Positives = 177/228 (77%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
TFN +IDGFGK G + AL MYE+M+ G+ PDV+TFTSLIDGYCR G+L Q + L EM
Sbjct: 369 TFNALIDGFGKSGNMISALAMYEKMLFHGYRPDVITFTSLIDGYCRAGKLSQGLKLWQEM 428
Query: 187 NERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGN 366
N + V P+ +TFS+LI+ALCKENRL EA + LRQLKW +++P PFIYNPVIDGFCKAGN
Sbjct: 429 NAKYVSPSAYTFSVLINALCKENRLQEAHEFLRQLKW-SNVIPRPFIYNPVIDGFCKAGN 487
Query: 367 VDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISS 546
VDEAN IVAEME K C DK+TFTILILG+CMKGRM EAI + +ML++GCAPDNIT++S
Sbjct: 488 VDEANLIVAEMEEKRCSPDKVTFTILILGNCMKGRMSEAISNFERMLAIGCAPDNITVNS 547
Query: 547 LVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVAV 690
L+SCL KAGM EA+ I++ A ++ G+S +R +R N +TVAV
Sbjct: 548 LISCLMKAGMPNEAHHIKKIAYKDLNLGMSPSRRADHLRANAKITVAV 595
Score = 117 bits (292), Expect = 4e-25
Identities = 68/198 (34%), Positives = 112/198 (56%), Gaps = 1/198 (0%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGE 183
+TFN +I G K GE+ A + + M S G + D+VT+ +LI G CR E+++ +LL E
Sbjct: 262 WTFNILIRGLCKIGEIDKAFEFFSDMESFGCYSDIVTYNTLISGLCRANEVDRGCHLLKE 321
Query: 184 MNER-KVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
+ R ++ P+V TF+ +IS CK ++ EA L ++ + P +N +IDGF K+
Sbjct: 322 VQSRIELSPDVITFTSVISGYCKLGKMEEASVLFDEMN-NSGVGPTSVTFNALIDGFGKS 380
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
GN+ A A+ +M G D +TFT LI G+C G++ + + ++ +M + +P T
Sbjct: 381 GNMISALAMYEKMLFHGYRPDVITFTSLIDGYCRAGKLSQGLKLWQEMNAKYVSPSAYTF 440
Query: 541 SSLVSCLRKAGMALEANE 594
S L++ L K EA+E
Sbjct: 441 SVLINALCKENRLQEAHE 458
Score = 115 bits (287), Expect = 2e-24
Identities = 61/201 (30%), Positives = 107/201 (53%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGE 183
F +N + + K+ +V A+ ++ + + PD TF LI G C++GE++++ +
Sbjct: 227 FVYNNLFNVLVKQNKVEEAVCLFRKHMGSHCRPDSWTFNILIRGLCKIGEIDKAFEFFSD 286
Query: 184 MNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAG 363
M ++ T++ LIS LC+ N ++ LL++++ R ++ P + VI G+CK G
Sbjct: 287 MESFGCYSDIVTYNTLISGLCRANEVDRGCHLLKEVQSRIELSPDVITFTSVISGYCKLG 346
Query: 364 NVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITIS 543
++EA+ + EM G +TF LI G G M+ A+ MY KML G PD IT +
Sbjct: 347 KMEEASVLFDEMNNSGVGPTSVTFNALIDGFGKSGNMISALAMYEKMLFHGYRPDVITFT 406
Query: 544 SLVSCLRKAGMALEANEIEQK 606
SL+ +AG + ++ Q+
Sbjct: 407 SLIDGYCRAGKLSQGLKLWQE 427
Score = 84.7 bits (208), Expect = 3e-14
Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 36/240 (15%)
Frame = +1
Query: 1 LFTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLG 180
++T+N ++ + G A +++ M S G PD L+ Y ++G+L + LL
Sbjct: 156 VWTYNFLLRSLCQIGLQDSAKLVFDYMRSDGHTPDDSIVELLVSSYAQMGKLNNAEKLLD 215
Query: 181 EMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
E++ +V + F ++ L + L K+N++ EA L R+ P + +N +I G CK
Sbjct: 216 EVHCGEVRLSPFVYNNLFNVLVKQNKVEEAVCLFRK-HMGSHCRPDSWTFNILIRGLCKI 274
Query: 361 GNVDEANAIVAEMEAKGCIHD------------------------------------KMT 432
G +D+A ++ME+ GC D +T
Sbjct: 275 GEIDKAFEFFSDMESFGCYSDIVTYNTLISGLCRANEVDRGCHLLKEVQSRIELSPDVIT 334
Query: 433 FTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKAL 612
FT +I G+C G+M EA ++++M + G P ++T ++L+ K+G + A + +K L
Sbjct: 335 FTSVISGYCKLGKMEEASVLFDEMNNSGVGPTSVTFNALIDGFGKSGNMISALAMYEKML 394
Score = 69.3 bits (168), Expect = 3e-09
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 1/171 (0%)
Frame = +1
Query: 61 LKMYE-RMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEMNERKVPPNVFTFSILIS 237
LK +E +S + V T+ L+ C++G + + + M P+ +L+S
Sbjct: 140 LKFFELSRLSLSVNHSVWTYNFLLRSLCQIGLQDSAKLVFDYMRSDGHTPDDSIVELLVS 199
Query: 238 ALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGNVDEANAIVAEMEAKGCI 417
+ + +LN A LL ++ E + PF+YN + + K V+EA + + C
Sbjct: 200 SYAQMGKLNNAEKLLDEVHCGE-VRLSPFVYNNLFNVLVKQNKVEEAVCLFRKHMGSHCR 258
Query: 418 HDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKA 570
D TF ILI G C G + +A ++ M S GC D +T ++L+S L +A
Sbjct: 259 PDSWTFNILIRGLCKIGEIDKAFEFFSDMESFGCYSDIVTYNTLISGLCRA 309
>ref|XP_008388776.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Malus domestica]
Length = 593
Score = 293 bits (751), Expect = 8e-91
Identities = 144/228 (63%), Positives = 179/228 (78%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
TFN +IDGFGK G + AL M+++M+ G+H DV TFTSLIDG+CR G+L Q + L EM
Sbjct: 367 TFNAMIDGFGKTGNMGSALAMHQKMLFHGYHSDVFTFTSLIDGHCRAGKLSQGLKLWQEM 426
Query: 187 NERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGN 366
N + V P+ +TFS+LI+ALCKE+RL+EARD LRQLKW ++VP PFIYNPVIDGFCKAGN
Sbjct: 427 NGKNVSPSAYTFSVLINALCKESRLHEARDFLRQLKW-SNVVPKPFIYNPVIDGFCKAGN 485
Query: 367 VDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISS 546
VDEANAIVAEME K C DK+TFTILILG+CMKGRM EAI + KML++GCAPD+IT++S
Sbjct: 486 VDEANAIVAEMEEKRCSPDKVTFTILILGNCMKGRMSEAISNFKKMLAIGCAPDSITVNS 545
Query: 547 LVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVAV 690
L SCL KAGM EA+ I+Q A N ++SG+S RT ++ N + VAV
Sbjct: 546 LTSCLMKAGMPNEAHHIKQIAYNDLNSGMSPSGRTDHMKANAQIPVAV 593
Score = 120 bits (300), Expect = 4e-26
Identities = 68/198 (34%), Positives = 109/198 (55%), Gaps = 1/198 (0%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGE 183
+TFN +I G + GE+ A +++ M S G +PD+VT+ +LI G CR E+++ LL E
Sbjct: 260 WTFNILIRGLCRVGEIDKAFELFSDMGSSGCYPDIVTYNTLISGLCRANEVDRGFQLLKE 319
Query: 184 MNER-KVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
+ R ++ P+V TF+ +IS CK ++ EA L ++ + P +N +IDGF K
Sbjct: 320 VQSRIELSPDVITFTSVISGYCKLGKMEEAXVLFDEMI-NAGVRPTSVTFNAMIDGFGKT 378
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
GN+ A A+ +M G D TFT LI GHC G++ + + ++ +M +P T
Sbjct: 379 GNMGSALAMHQKMLFHGYHSDVFTFTSLIDGHCRAGKLSQGLKLWQEMNGKNVSPSAYTF 438
Query: 541 SSLVSCLRKAGMALEANE 594
S L++ L K EA +
Sbjct: 439 SVLINALCKESRLHEARD 456
Score = 105 bits (262), Expect = 4e-21
Identities = 59/201 (29%), Positives = 104/201 (51%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGE 183
F +N + + + +V A+ ++ + + PD TF LI G CR+GE++++ L +
Sbjct: 225 FVYNNLFNVLVXQNKVDEAVCLFRKHMGSHXXPDNWTFNILIRGLCRVGEIDKAFELFSD 284
Query: 184 MNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAG 363
M P++ T++ LIS LC+ N ++ LL++++ R ++ P + VI G+CK G
Sbjct: 285 MGSSGCYPDIVTYNTLISGLCRANEVDRGFQLLKEVQSRIELSPDVITFTSVISGYCKLG 344
Query: 364 NVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITIS 543
++EA + EM G +TF +I G G M A+ M+ KML G D T +
Sbjct: 345 KMEEAXVLFDEMINAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKMLFHGYHSDVFTFT 404
Query: 544 SLVSCLRKAGMALEANEIEQK 606
SL+ +AG + ++ Q+
Sbjct: 405 SLIDGHCRAGKLSQGLKLWQE 425
Score = 83.6 bits (205), Expect = 7e-14
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 36/240 (15%)
Frame = +1
Query: 1 LFTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLG 180
++T+N ++ + G A +++ M S G PD L+ Y ++G+L+ + L
Sbjct: 154 VWTYNFLLRSLCQMGLQDSAKLVFDYMRSDGHTPDDSVVELLVSSYAQMGKLDDAEKFLN 213
Query: 181 EMN--ERKVPPNVF---------------------------------TFSILISALCKEN 255
E + E ++PP V+ TF+ILI LC+
Sbjct: 214 EAHCGEIRLPPFVYNNLFNVLVXQNKVDEAVCLFRKHMGSHXXPDNWTFNILIRGLCRVG 273
Query: 256 RLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGNVDEANAIVAEMEAKGCIH-DKMT 432
+++A +L + P YN +I G C+A VD ++ E++++ + D +T
Sbjct: 274 EIDKAFELFSDMG-SSGCYPDIVTYNTLISGLCRANEVDRGFQLLKEVQSRIELSPDVIT 332
Query: 433 FTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKAL 612
FT +I G+C G+M EA ++++M++ G P ++T ++++ K G A + QK L
Sbjct: 333 FTSVISGYCKLGKMEEAXVLFDEMINAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKML 392
Score = 70.5 bits (171), Expect = 1e-09
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Frame = +1
Query: 61 LKMYE-RMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEMNERKVPPNVFTFSILIS 237
LK +E VS V T+ L+ C++G + + + M P+ +L+S
Sbjct: 138 LKFFELSRVSLSVKHSVWTYNFLLRSLCQMGLQDSAKLVFDYMRSDGHTPDDSVVELLVS 197
Query: 238 ALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGNVDEANAIVAEMEAKGCI 417
+ + +L++A L + E I PPF+YN + + VDEA + +
Sbjct: 198 SYAQMGKLDDAEKFLNEAHCGE-IRLPPFVYNNLFNVLVXQNKVDEAVCLFRKHMGSHXX 256
Query: 418 HDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKA 570
D TF ILI G C G + +A +++ M S GC PD +T ++L+S L +A
Sbjct: 257 PDNWTFNILIRGLCRVGEIDKAFELFSDMGSSGCYPDIVTYNTLISGLCRA 307
>ref|XP_009359734.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Pyrus x bretschneideri]
Length = 547
Score = 289 bits (739), Expect = 2e-89
Identities = 142/228 (62%), Positives = 177/228 (77%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
TFN +IDGFGK G + AL M+++M+ G+ DV TFTSLIDG+CR G+L Q + L EM
Sbjct: 321 TFNAMIDGFGKTGNMGSALAMHQKMLFHGYRSDVFTFTSLIDGHCRAGQLSQGLKLWQEM 380
Query: 187 NERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGN 366
N + V P+ +TFS+LI+ALCKE+RL+EARD LRQLKW ++VP PFIYNPVIDGFCKAGN
Sbjct: 381 NGKNVSPSAYTFSVLINALCKESRLHEARDFLRQLKW-SNVVPKPFIYNPVIDGFCKAGN 439
Query: 367 VDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISS 546
VDEANAIVAEME K C DK+TFTILILG+CMKGRM EAI + KML++GCAPDNIT+++
Sbjct: 440 VDEANAIVAEMEEKRCSPDKVTFTILILGNCMKGRMSEAISNFKKMLAIGCAPDNITVNA 499
Query: 547 LVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVAV 690
L SCL KAGM EA+ I+Q A ++SG+S RT ++ N + VAV
Sbjct: 500 LTSCLMKAGMPNEAHHIKQIAYKDLNSGMSPSGRTDYMKANAQIPVAV 547
Score = 116 bits (291), Expect = 5e-25
Identities = 68/198 (34%), Positives = 109/198 (55%), Gaps = 1/198 (0%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGE 183
+TFN +I G + GEV A +++ M S G +PD+VT+ +LI G CR ++++ LL E
Sbjct: 214 WTFNILIRGLCRVGEVDKAFELFSDMGSFGCYPDIVTYNTLITGLCRTNKVDRGCQLLKE 273
Query: 184 MNER-KVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
+ R ++ P+V TF+ +IS CK ++ EA L ++ + P +N +IDGF K
Sbjct: 274 VQSRIELSPDVITFTSVISGYCKLGKMEEASVLFDEMI-NAGVRPTSVTFNAMIDGFGKT 332
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
GN+ A A+ +M G D TFT LI GHC G++ + + ++ +M +P T
Sbjct: 333 GNMGSALAMHQKMLFHGYRSDVFTFTSLIDGHCRAGQLSQGLKLWQEMNGKNVSPSAYTF 392
Query: 541 SSLVSCLRKAGMALEANE 594
S L++ L K EA +
Sbjct: 393 SVLINALCKESRLHEARD 410
Score = 104 bits (259), Expect = 8e-21
Identities = 57/201 (28%), Positives = 106/201 (52%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGE 183
F +N + + ++ + A+ ++ + + PD TF LI G CR+GE++++ L +
Sbjct: 179 FVYNNLFNVLVQQNKADEAVYLFRKHMWSHCRPDSWTFNILIRGLCRVGEVDKAFELFSD 238
Query: 184 MNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAG 363
M P++ T++ LI+ LC+ N+++ LL++++ R ++ P + VI G+CK G
Sbjct: 239 MGSFGCYPDIVTYNTLITGLCRTNKVDRGCQLLKEVQSRIELSPDVITFTSVISGYCKLG 298
Query: 364 NVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITIS 543
++EA+ + EM G +TF +I G G M A+ M+ KML G D T +
Sbjct: 299 KMEEASVLFDEMINAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKMLFHGYRSDVFTFT 358
Query: 544 SLVSCLRKAGMALEANEIEQK 606
SL+ +AG + ++ Q+
Sbjct: 359 SLIDGHCRAGQLSQGLKLWQE 379
Score = 84.7 bits (208), Expect = 3e-14
Identities = 57/240 (23%), Positives = 110/240 (45%), Gaps = 36/240 (15%)
Frame = +1
Query: 1 LFTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLG 180
++T+N ++ + G A +++ M S G PD L+ Y ++G+L+ + L
Sbjct: 108 VWTYNFLLRSLCQMGLQDSAKLVFDYMRSDGHTPDDSAVELLVSSYAQMGKLDNAEKFLD 167
Query: 181 EMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
E++ ++ F ++ L + L ++N+ +EA L R+ W P + +N +I G C+
Sbjct: 168 EVHCDEIRLTPFVYNNLFNVLVQQNKADEAVYLFRKHMWSH-CRPDSWTFNILIRGLCRV 226
Query: 361 GNVDEANAIVAEMEAKGCIHD------------------------------------KMT 432
G VD+A + ++M + GC D +T
Sbjct: 227 GEVDKAFELFSDMGSFGCYPDIVTYNTLITGLCRTNKVDRGCQLLKEVQSRIELSPDVIT 286
Query: 433 FTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKAL 612
FT +I G+C G+M EA ++++M++ G P ++T ++++ K G A + QK L
Sbjct: 287 FTSVISGYCKLGKMEEASVLFDEMINAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKML 346
Score = 66.2 bits (160), Expect = 3e-08
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
Frame = +1
Query: 61 LKMYE-RMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEMNERKVPPNVFTFSILIS 237
LK +E VS + V T+ L+ C++G + + + M P+ +L+S
Sbjct: 92 LKFFELSRVSLSVNHSVWTYNFLLRSLCQMGLQDSAKLVFDYMRSDGHTPDDSAVELLVS 151
Query: 238 ALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGNVDEANAIVAEMEAKGCI 417
+ + +L+ A L ++ ++I PF+YN + + + DEA + + C
Sbjct: 152 SYAQMGKLDNAEKFLDEVHC-DEIRLTPFVYNNLFNVLVQQNKADEAVYLFRKHMWSHCR 210
Query: 418 HDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVSCL 561
D TF ILI G C G + +A +++ M S GC PD +T ++L++ L
Sbjct: 211 PDSWTFNILIRGLCRVGEVDKAFELFSDMGSFGCYPDIVTYNTLITGL 258
>ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Citrus sinensis] gi|568841566|ref|XP_006474729.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Citrus sinensis]
Length = 595
Score = 287 bits (735), Expect = 2e-88
Identities = 142/227 (62%), Positives = 176/227 (77%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
TFN +IDGFGK G + A M ERM+S G+ PDVVTF+SLIDGYCR G+L Q + L EM
Sbjct: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
Query: 187 NERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGN 366
+ + PNV+TF+ILI+ALCKENRLN+AR L+QLKW D+VP PF+YNPVIDGFCKAGN
Sbjct: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGN 487
Query: 367 VDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISS 546
VDEAN IVAEME K C DK+TFTILI+GHCMKGRMVEAI ++NKML++GCAPD+IT++S
Sbjct: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLTIGCAPDDITVNS 547
Query: 547 LVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVA 687
L+SCL K GM EA I Q+A ++ L S ++ +R N ++ VA
Sbjct: 548 LISCLLKGGMPNEAFRIMQRASEDLNLQLPSWKKAVPLRTNTDIPVA 594
Score = 114 bits (286), Expect = 3e-24
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Frame = +1
Query: 4 FTFNCIIDGFGKKG---EVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNL 174
F +N +++ K+ E + K Y R+ S PD TF LI G R+GE++++
Sbjct: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYS---QPDTWTFNILIQGLSRIGEVKKAFEF 283
Query: 175 LGEMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFC 354
+M P++ T++ LIS LC+ N + +LL+++K++ + P Y VI G+C
Sbjct: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
Query: 355 KAGNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNI 534
K G +D+A I EM + G +TF +LI G G MV A M +MLS G PD +
Sbjct: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
Query: 535 TISSLV 552
T SSL+
Sbjct: 404 TFSSLI 409
Score = 72.8 bits (177), Expect = 2e-10
Identities = 53/238 (22%), Positives = 102/238 (42%), Gaps = 35/238 (14%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
T+N ++ + G +++ M S G P+ + R G+ + + LL +
Sbjct: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
Query: 187 NERKVPPNVFTFSILISALCKENRLNEARDLLRQL--------KWREDIV---------- 312
+V + F ++ L++AL K+N +EA + ++ W +I+
Sbjct: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
Query: 313 ----------------PPPFIYNPVIDGFCKAGNVDEANAIVAEMEAKGCIH-DKMTFTI 441
P YN +I G C+ V + ++ E++ K D +T+T
Sbjct: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
Query: 442 LILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALN 615
+I G+C G+M +A G+YN+M S G P +T + L+ K G + A + ++ L+
Sbjct: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
>ref|XP_009615517.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123061|ref|XP_009615518.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123063|ref|XP_009615519.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123065|ref|XP_009615520.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123067|ref|XP_009615521.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
Length = 546
Score = 286 bits (731), Expect = 2e-88
Identities = 138/230 (60%), Positives = 177/230 (76%)
Frame = +1
Query: 1 LFTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLG 180
+ TFN +I+GFGK G++ A KMYERM + G PDVVT TSLIDG+CR G+L+Q + L
Sbjct: 317 MVTFNILINGFGKIGDMFSAQKMYERMCAFGCPPDVVTLTSLIDGHCRTGDLDQGLRLWD 376
Query: 181 EMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
EMN R + PN++TFS+LI A+ KENRLNEAR LLRQL R+DIVP PF+YNPV+DGFCKA
Sbjct: 377 EMNARNLWPNLYTFSVLIGAMSKENRLNEARVLLRQLILRDDIVPQPFVYNPVLDGFCKA 436
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
GN++EAN I AEME+KGC HDK TFTILILGHCMKGRM+EA+ +Y+KM+S+GC PD IT+
Sbjct: 437 GNLNEANVIAAEMESKGCCHDKFTFTILILGHCMKGRMLEAMAIYDKMMSLGCVPDEITV 496
Query: 541 SSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVAV 690
+ L SCL KAGMA EA ++ + + S L S +++ R +++ VAV
Sbjct: 497 TCLTSCLLKAGMAKEAYKVRLTSPKDLKSDLLSSKQSVPFRTRLDIPVAV 546
Score = 107 bits (268), Expect = 5e-22
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMV--SGGFHPDVVTFTSLIDGYCRLGELEQSMNLL 177
F N ++ K+ +V A+ ++ + S PD TF +I G CR+G ++++
Sbjct: 175 FVHNSLLSLLMKRNQVDGAVDFFKDHILRSERLFPDTCTFNIVIRGLCRVGGVDKAFEFF 234
Query: 178 GEMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCK 357
+M P++ T++ LI+ LC +++ AR LLR L+ ++ P Y VI G+CK
Sbjct: 235 NDMGSFDCFPDLVTYNTLINGLCGVGQVDRARGLLRSLELQDGYSPDVVTYTSVISGYCK 294
Query: 358 AGNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNIT 537
G +D+A ++ EM G + +TF ILI G G M A MY +M + GC PD +T
Sbjct: 295 LGRMDDAINLMDEMITYGISPNMVTFNILINGFGKIGDMFSAQKMYERMCAFGCPPDVVT 354
Query: 538 ISSLV 552
++SL+
Sbjct: 355 LTSLI 359
Score = 75.1 bits (183), Expect = 4e-11
Identities = 40/142 (28%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Frame = +1
Query: 184 MNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAG 363
+ ++ P+ TF+I+I LC+ +++A + + D P YN +I+G C G
Sbjct: 202 LRSERLFPDTCTFNIVIRGLCRVGGVDKAFEFFNDMG-SFDCFPDLVTYNTLINGLCGVG 260
Query: 364 NVDEANAIVAEMEAK-GCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
VD A ++ +E + G D +T+T +I G+C GRM +AI + ++M++ G +P+ +T
Sbjct: 261 QVDRARGLLRSLELQDGYSPDVVTYTSVISGYCKLGRMDDAINLMDEMITYGISPNMVTF 320
Query: 541 SSLVSCLRKAGMALEANEIEQK 606
+ L++ K G A ++ ++
Sbjct: 321 NILINGFGKIGDMFSAQKMYER 342
>ref|XP_015062693.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Solanum pennellii]
gi|969996347|ref|XP_015062701.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Solanum pennellii]
Length = 529
Score = 284 bits (727), Expect = 6e-88
Identities = 132/196 (67%), Positives = 165/196 (84%)
Frame = +1
Query: 1 LFTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLG 180
L TFN +I+GFGK G++ A+KMY +M + G+ PDVVTFTSL+DGYCR GE++Q + L
Sbjct: 323 LVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLVDGYCRTGEVDQGLKLWD 382
Query: 181 EMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
+MN R + PN++T+S+LISAL KENRLNEAR+LLRQLK R+DIVP PF+YNPV+DGFCKA
Sbjct: 383 DMNSRNLSPNLYTYSVLISALSKENRLNEARELLRQLKSRDDIVPQPFLYNPVLDGFCKA 442
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
GN+ EAN I AEME+KGC HDK+TFTILILGHCMKGRM+EA+ +++KMLS+GC PD+IT+
Sbjct: 443 GNLSEANVIAAEMESKGCCHDKITFTILILGHCMKGRMLEALAIFDKMLSLGCVPDDITV 502
Query: 541 SSLVSCLRKAGMALEA 588
S L SCL KAGM EA
Sbjct: 503 SCLTSCLLKAGMVKEA 518
Score = 111 bits (278), Expect = 2e-23
Identities = 71/221 (32%), Positives = 113/221 (51%), Gaps = 4/221 (1%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMV--SGGFHPDVVTFTSLIDGYCRLGELEQSMNLL 177
F N ++ K+ V A+ ++ + S PD TF ++I G CR+G ++++
Sbjct: 181 FVHNSLLSLLMKRSRVDEAVDFFKHHILRSDRLFPDTCTFNTVIRGLCRVGGVDKAFEFF 240
Query: 178 GEMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCK 357
+M P+ T++ LI+ LC ++N A+ LL L+ ++ + P Y +I G+CK
Sbjct: 241 NDMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCK 300
Query: 358 AGNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNIT 537
G +DEA ++ EM + G + +TF ILI G G M AI MY KM +VG PD +T
Sbjct: 301 LGRMDEAINLMDEMISYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVT 360
Query: 538 ISSLVSCLRKAGMALEANEIEQ--KALNSMHSGLSSPQRTT 654
+SLV + G E++Q K + M+S SP T
Sbjct: 361 FTSLVDGYCRTG------EVDQGLKLWDDMNSRNLSPNLYT 395
Score = 108 bits (269), Expect = 4e-22
Identities = 67/198 (33%), Positives = 111/198 (56%), Gaps = 1/198 (0%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
TFN +I G + G V A + + M S G PD VT+ +LI+G C +G++ ++ LLG +
Sbjct: 219 TFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLLGNL 278
Query: 187 N-ERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAG 363
+ + P+V T++ LIS CK R++EA +L+ ++ I P +N +I+GF K G
Sbjct: 279 QLQDGLSPDVVTYTSLISGYCKLGRMDEAINLMDEMI-SYGISPNLVTFNILINGFGKIG 337
Query: 364 NVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITIS 543
++ A + +M A G D +TFT L+ G+C G + + + +++ M S +P+ T S
Sbjct: 338 DMFSAIKMYGKMCAVGYPPDVVTFTSLVDGYCRTGEVDQGLKLWDDMNSRNLSPNLYTYS 397
Query: 544 SLVSCLRKAGMALEANEI 597
L+S L K EA E+
Sbjct: 398 VLISALSKENRLNEAREL 415
>gb|KDO73910.1| hypothetical protein CISIN_1g007640mg [Citrus sinensis]
gi|641855117|gb|KDO73911.1| hypothetical protein
CISIN_1g007640mg [Citrus sinensis]
Length = 595
Score = 286 bits (731), Expect = 8e-88
Identities = 142/227 (62%), Positives = 174/227 (76%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
TFN +IDGFGK G + A M ERM+S G+ PDVVTF+SLIDGYCR G+L Q + L EM
Sbjct: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
Query: 187 NERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGN 366
+ + PNV+TF+ILI+ALCKENRLN+AR L+QLKW D+VP PF+YNPVIDGFCKAGN
Sbjct: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGN 487
Query: 367 VDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISS 546
VDEAN IVAEME K C DK+TFTILI+GHCMKGRMVEAI ++NKML +GCAPD+IT++S
Sbjct: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
Query: 547 LVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVA 687
L+SCL K GM EA I Q+A + L S ++ +R N ++ VA
Sbjct: 548 LISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPLRTNTDIPVA 594
Score = 114 bits (286), Expect = 3e-24
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Frame = +1
Query: 4 FTFNCIIDGFGKKG---EVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNL 174
F +N +++ K+ E + K Y R+ S PD TF LI G R+GE++++
Sbjct: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYS---QPDTWTFNILIQGLSRIGEVKKAFEF 283
Query: 175 LGEMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFC 354
+M P++ T++ LIS LC+ N + +LL+++K++ + P Y VI G+C
Sbjct: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
Query: 355 KAGNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNI 534
K G +D+A I EM + G +TF +LI G G MV A M +MLS G PD +
Sbjct: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
Query: 535 TISSLV 552
T SSL+
Sbjct: 404 TFSSLI 409
Score = 72.8 bits (177), Expect = 2e-10
Identities = 53/238 (22%), Positives = 102/238 (42%), Gaps = 35/238 (14%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
T+N ++ + G +++ M S G P+ + R G+ + + LL +
Sbjct: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
Query: 187 NERKVPPNVFTFSILISALCKENRLNEARDLLRQL--------KWREDIV---------- 312
+V + F ++ L++AL K+N +EA + ++ W +I+
Sbjct: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
Query: 313 ----------------PPPFIYNPVIDGFCKAGNVDEANAIVAEMEAKGCIH-DKMTFTI 441
P YN +I G C+ V + ++ E++ K D +T+T
Sbjct: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
Query: 442 LILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALN 615
+I G+C G+M +A G+YN+M S G P +T + L+ K G + A + ++ L+
Sbjct: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
>ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citrus clementina]
gi|557556032|gb|ESR66046.1| hypothetical protein
CICLE_v10007804mg [Citrus clementina]
Length = 595
Score = 285 bits (730), Expect = 1e-87
Identities = 142/227 (62%), Positives = 174/227 (76%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
TFN +IDGFGK G + A M ERM+S G+ PDVVTF+SLIDGYCR G+L Q + L EM
Sbjct: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSLGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
Query: 187 NERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGN 366
+ + PNV+TF+ILI+ALCKENRLN+AR L+QLKW D+VP PF+YNPVIDGFCKAGN
Sbjct: 429 KGKNLSPNVYTFAILINALCKENRLNDARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGN 487
Query: 367 VDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISS 546
VDEAN IVAEME K C DK+TFTILI+GHCMKGRMVEAI ++NKML +GCAPD+IT++S
Sbjct: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
Query: 547 LVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVA 687
L+SCL K GM EA I Q+A + L S ++ +R N ++ VA
Sbjct: 548 LISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPLRTNTDIPVA 594
Score = 120 bits (300), Expect = 4e-26
Identities = 65/186 (34%), Positives = 103/186 (55%), Gaps = 3/186 (1%)
Frame = +1
Query: 4 FTFNCIIDGFGKKG---EVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNL 174
F +N +++ K+ E + K Y R+ S PD TF LI G CR+GE++++
Sbjct: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYS---QPDTWTFNILIRGLCRIGEVKKAFEF 283
Query: 175 LGEMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFC 354
+M P++ T++ LIS LC+ N + +LL+++K++ + +P Y VI G+C
Sbjct: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFLPDVVTYTSVISGYC 343
Query: 355 KAGNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNI 534
K G +D+A +I EM + G +TF +LI G G MV A M +MLS+G PD +
Sbjct: 344 KLGKMDKATSIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSLGYLPDVV 403
Query: 535 TISSLV 552
T SSL+
Sbjct: 404 TFSSLI 409
Score = 73.6 bits (179), Expect = 1e-10
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Frame = +1
Query: 94 FHPDVVT-----FTSLIDGYCRLGELEQSMNLLGEMNERKVPPNVFTFSILISALCKENR 258
F P VT + SL++ + ++++ + E P+ +TF+ILI LC+
Sbjct: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIRGLCRIGE 276
Query: 259 LNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGNVDEANAIVAEMEAKG-CIHDKMTF 435
+ +A + + P YN +I G C+ V + ++ E++ K + D +T+
Sbjct: 277 VKKAFEFFYDMG-SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFLPDVVTY 335
Query: 436 TILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALN 615
T +I G+C G+M +A +YN+M S G P +T + L+ K G + A + ++ L+
Sbjct: 336 TSVISGYCKLGKMDKATSIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
>ref|XP_008337852.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Malus domestica]
Length = 597
Score = 285 bits (729), Expect = 2e-87
Identities = 141/228 (61%), Positives = 176/228 (77%)
Frame = +1
Query: 7 TFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEM 186
TFN +IDGFGK G + AL M+++M+ G+ DV TFTSLIDG+CR G+L Q + L EM
Sbjct: 371 TFNAMIDGFGKTGNMGSALAMHQKMLFHGYRSDVFTFTSLIDGHCRAGQLSQGLKLWQEM 430
Query: 187 NERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGN 366
N + V P+ +TFS+LI+ALCKE+RL+EARD LRQLKW ++V PFIYNPVIDGFCKAGN
Sbjct: 431 NGKDVSPSAYTFSVLINALCKESRLHEARDFLRQLKW-SNVVLKPFIYNPVIDGFCKAGN 489
Query: 367 VDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISS 546
VDEANAIVAEME K C DK+TFTILILG+CMKGRM EAI + KML++GCAPDNIT+++
Sbjct: 490 VDEANAIVAEMEEKRCSPDKVTFTILILGNCMKGRMSEAISNFKKMLAIGCAPDNITVNA 549
Query: 547 LVSCLRKAGMALEANEIEQKALNSMHSGLSSPQRTTSVRNNMNVTVAV 690
L SCL KAGM EA+ I+Q A ++SG+S RT ++ N + VAV
Sbjct: 550 LTSCLMKAGMPNEAHHIKQIAYKDLNSGMSPSGRTDHMKANAQIPVAV 597
Score = 118 bits (295), Expect = 2e-25
Identities = 68/198 (34%), Positives = 109/198 (55%), Gaps = 1/198 (0%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGE 183
+TFN +I G + GE+ A +++ M S G +PD+VT+ +LI G CR E+++ LL E
Sbjct: 264 WTFNILIRGLCRVGEIGKAFELFSDMGSFGCYPDIVTYNTLITGLCRTNEVDRGCQLLKE 323
Query: 184 MNER-KVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
+ R ++ P+V TF+ +IS CK ++ EA L ++ + P +N +IDGF K
Sbjct: 324 VQSRIELSPDVITFTSVISGYCKLGKMEEASVLFDEMI-NAGVRPTSVTFNAMIDGFGKT 382
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITI 540
GN+ A A+ +M G D TFT LI GHC G++ + + ++ +M +P T
Sbjct: 383 GNMGSALAMHQKMLFHGYRSDVFTFTSLIDGHCRAGQLSQGLKLWQEMNGKDVSPSAYTF 442
Query: 541 SSLVSCLRKAGMALEANE 594
S L++ L K EA +
Sbjct: 443 SVLINALCKESRLHEARD 460
Score = 105 bits (261), Expect = 5e-21
Identities = 59/201 (29%), Positives = 105/201 (52%)
Frame = +1
Query: 4 FTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGE 183
F +N + + K+ +V A+ ++ + + PD TF LI G CR+GE+ ++ L +
Sbjct: 229 FVYNNLFNVLVKQNKVDEAVCLFRKHMGSHCCPDSWTFNILIRGLCRVGEIGKAFELFSD 288
Query: 184 MNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAG 363
M P++ T++ LI+ LC+ N ++ LL++++ R ++ P + VI G+CK G
Sbjct: 289 MGSFGCYPDIVTYNTLITGLCRTNEVDRGCQLLKEVQSRIELSPDVITFTSVISGYCKLG 348
Query: 364 NVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITIS 543
++EA+ + EM G +TF +I G G M A+ M+ KML G D T +
Sbjct: 349 KMEEASVLFDEMINAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKMLFHGYRSDVFTFT 408
Query: 544 SLVSCLRKAGMALEANEIEQK 606
SL+ +AG + ++ Q+
Sbjct: 409 SLIDGHCRAGQLSQGLKLWQE 429
Score = 85.1 bits (209), Expect = 2e-14
Identities = 53/207 (25%), Positives = 106/207 (51%), Gaps = 1/207 (0%)
Frame = +1
Query: 1 LFTFNCIIDGFGKKGEVAFALKMYERMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLG 180
++T+N ++ + G A +++ M S G PD L+ Y ++G+L+ + LG
Sbjct: 158 VWTYNFLLRSLCQMGLQDSAKLVFDYMRSDGHTPDDSAVELLVSSYAQMGKLDNAEKFLG 217
Query: 181 EMNERKVPPNVFTFSILISALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKA 360
E++ ++ F ++ L + L K+N+++EA L R+ P + +N +I G C+
Sbjct: 218 EVHCDEIRLTPFVYNNLFNVLVKQNKVDEAVCLFRK-HMGSHCCPDSWTFNILIRGLCRV 276
Query: 361 GNVDEANAIVAEMEAKGCIHDKMTFTILILGHCMKGRMVEAIGMYNKMLS-VGCAPDNIT 537
G + +A + ++M + GC D +T+ LI G C + + ++ S + +PD IT
Sbjct: 277 GEIGKAFELFSDMGSFGCYPDIVTYNTLITGLCRTNEVDRGCQLLKEVQSRIELSPDVIT 336
Query: 538 ISSLVSCLRKAGMALEANEIEQKALNS 618
+S++S K G EA+ + + +N+
Sbjct: 337 FTSVISGYCKLGKMEEASVLFDEMINA 363
Score = 72.0 bits (175), Expect = 4e-10
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Frame = +1
Query: 61 LKMYE-RMVSGGFHPDVVTFTSLIDGYCRLGELEQSMNLLGEMNERKVPPNVFTFSILIS 237
LK +E VS + V T+ L+ C++G + + + M P+ +L+S
Sbjct: 142 LKFFELSRVSLSVNHSVWTYNFLLRSLCQMGLQDSAKLVFDYMRSDGHTPDDSAVELLVS 201
Query: 238 ALCKENRLNEARDLLRQLKWREDIVPPPFIYNPVIDGFCKAGNVDEANAIVAEMEAKGCI 417
+ + +L+ A L ++ ++I PF+YN + + K VDEA + + C
Sbjct: 202 SYAQMGKLDNAEKFLGEVHC-DEIRLTPFVYNNLFNVLVKQNKVDEAVCLFRKHMGSHCC 260
Query: 418 HDKMTFTILILGHCMKGRMVEAIGMYNKMLSVGCAPDNITISSLVSCL 561
D TF ILI G C G + +A +++ M S GC PD +T ++L++ L
Sbjct: 261 PDSWTFNILIRGLCRVGEIGKAFELFSDMGSFGCYPDIVTYNTLITGL 308