BLASTX nr result
ID: Rehmannia27_contig00027951
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00027951
(515 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP54918.1| Retrovirus-related Pol polyprotein from transposo... 179 2e-51
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera] 178 9e-49
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo... 178 9e-49
gb|KYP40999.1| Retrovirus-related Pol polyprotein from transposo... 177 1e-48
ref|XP_008809371.1| PREDICTED: uncharacterized protein LOC103721... 167 1e-48
gb|KYP48666.1| Retrovirus-related Pol polyprotein from transposo... 167 4e-48
gb|KYP37906.1| Retrovirus-related Pol polyprotein from transposo... 176 4e-48
emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera] 176 6e-48
gb|KYP64431.1| Retrovirus-related Pol polyprotein from transposo... 174 1e-47
gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposo... 174 2e-47
gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposo... 174 3e-47
gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposo... 174 3e-47
ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r... 172 3e-47
ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794... 173 4e-47
gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposo... 173 5e-47
gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposo... 172 1e-46
gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposo... 172 1e-46
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo... 172 1e-46
gb|KYP75700.1| Retrovirus-related Pol polyprotein from transposo... 158 1e-46
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera] 171 2e-46
>gb|KYP54918.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 471
Score = 179 bits (454), Expect = 2e-51
Identities = 90/171 (52%), Positives = 119/171 (69%)
Frame = +1
Query: 1 SSRSRSTPAYLQVYDCVLPPSMKHNSSAQFVSTDRKYNICNFISVNQLGSNHKHFTANIS 180
S R +P YL+ + C +S+ +S + + + I+ N L S+H H+ ++S
Sbjct: 26 SQRIPFSPTYLKDFHC------NFLTSSPQLSKGISHPLSSVINYNTLSSSHLHYVLSLS 79
Query: 181 TIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVKYKSNG 360
T EPK Y QA KS EW AMKAE+ AL NNTW + DL KH IGCKWVYK+KY+S+G
Sbjct: 80 THEEPKFYHQAVKSQEWVVAMKAEIDALTANNTWTIVDLTSGKHPIGCKWVYKIKYRSDG 139
Query: 361 SIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
S+ERYKARLVAKG+TQ EGLDYF+TF+ VA ++TVRL++AVA++Q WFLHQ
Sbjct: 140 SVERYKARLVAKGFTQTEGLDYFETFAPVAKLTTVRLLLAVASSQTWFLHQ 190
>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 178 bits (451), Expect = 9e-49
Identities = 88/173 (50%), Positives = 120/173 (69%), Gaps = 2/173 (1%)
Frame = +1
Query: 1 SSRSRSTPAYLQVYDC--VLPPSMKHNSSAQFVSTDRKYNICNFISVNQLGSNHKHFTAN 174
S R++ P YLQ Y C + + + + S+ + Y I +F+S ++L S HK F +
Sbjct: 856 SERTKHLPKYLQNYYCGNMTKIDLATQAPSSCSSSGKPYYIFSFLSDSKLSSKHKAFISI 915
Query: 175 ISTIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVKYKS 354
IS+ EPK Y QA W+ AM E+ ALE N TW L LPPNK IGCKWVY+VK+K+
Sbjct: 916 ISSTFEPKTYKQAVSIPHWKTAMTDEIKALEHNKTWDLAILPPNKTTIGCKWVYQVKFKA 975
Query: 355 NGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
+GS+ERYKARLVAKGYTQ+EGLD+FDT+S VA ++TVR+++A+AA + W+LHQ
Sbjct: 976 DGSVERYKARLVAKGYTQQEGLDFFDTYSPVAKMTTVRVLLAIAATKQWYLHQ 1028
>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1316
Score = 178 bits (451), Expect = 9e-49
Identities = 87/171 (50%), Positives = 120/171 (70%)
Frame = +1
Query: 1 SSRSRSTPAYLQVYDCVLPPSMKHNSSAQFVSTDRKYNICNFISVNQLGSNHKHFTANIS 180
S+R R P YLQ + ++S ST ++ + +F+S + L + H+ +IS
Sbjct: 744 STRPRRPPTYLQDFHGAFT-----STSTAHSSTGIRHPLHSFLSYDLLSPSFHHYVFSIS 798
Query: 181 TIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVKYKSNG 360
++ EPKN+ +ASKS W +AM E+ ALE NNTW+LT LPP+K IGC+WVYKVK+K++G
Sbjct: 799 SVTEPKNFAEASKSDSWLKAMHEEIFALEANNTWVLTTLPPHKTAIGCRWVYKVKHKADG 858
Query: 361 SIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
SI+RYKARLVAKGYTQ EGLD+FDTFS VA ++TVRL++++AA W L Q
Sbjct: 859 SIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLLSLAAINNWHLKQ 909
>gb|KYP40999.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1029
Score = 177 bits (450), Expect = 1e-48
Identities = 83/171 (48%), Positives = 123/171 (71%)
Frame = +1
Query: 1 SSRSRSTPAYLQVYDCVLPPSMKHNSSAQFVSTDRKYNICNFISVNQLGSNHKHFTANIS 180
S+R R P YL+ Y C + + H++ ST +++ F+S N+L ++K F +++
Sbjct: 827 STRQRHPPNYLRDYHCNI---VNHHAPLTH-STSVPHSLSAFLSYNRLSPSYKSFVLSLT 882
Query: 181 TIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVKYKSNG 360
+ EP++Y QA + W++AM E++ALE+N +WILTDLP KH IGCKW+YK+K+K++G
Sbjct: 883 SSAEPQSYNQAIRHACWKDAMDKEIIALEQNQSWILTDLPQGKHPIGCKWIYKIKHKADG 942
Query: 361 SIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
SIERYKARLVAKGY Q+EG+D+FDTFS V +T+RL++A+AA + W LHQ
Sbjct: 943 SIERYKARLVAKGYNQQEGVDFFDTFSPVVKHTTIRLILAIAAVKQWHLHQ 993
>ref|XP_008809371.1| PREDICTED: uncharacterized protein LOC103721098 [Phoenix
dactylifera]
Length = 274
Score = 167 bits (422), Expect = 1e-48
Identities = 83/176 (47%), Positives = 119/176 (67%), Gaps = 5/176 (2%)
Frame = +1
Query: 1 SSRSRSTPAYLQVYDCVL---PP--SMKHNSSAQFVSTDRKYNICNFISVNQLGSNHKHF 165
SSR R P+YLQ Y+C L PP + + S + Y+I +F++ ++L S+H+ +
Sbjct: 74 SSRIRHPPSYLQEYNCSLVSRPPHSQLVNQQSENSAKQGKPYDISHFLTYDKLSSSHRAY 133
Query: 166 TANISTIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVK 345
+IS+ V+PK Y QASKS EWQ AM +L AL +NNTW +T LP + CKWVYK K
Sbjct: 134 ALSISSHVDPKTYGQASKSVEWQVAMDNKLRALIQNNTWTVTVLPKGAEAVDCKWVYKTK 193
Query: 346 YKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
+K++G+ +R KARLVAK YTQ+ GLDY +TFS VA I+T+++++A+AA W L+Q
Sbjct: 194 FKADGTEKRKKARLVAKSYTQQAGLDYQETFSPVAKITTIKILLAIAAVNNWHLYQ 249
>gb|KYP48666.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 312
Score = 167 bits (422), Expect = 4e-48
Identities = 82/171 (47%), Positives = 116/171 (67%)
Frame = +1
Query: 1 SSRSRSTPAYLQVYDCVLPPSMKHNSSAQFVSTDRKYNICNFISVNQLGSNHKHFTANIS 180
S+R + P YL Y C L +++ + S +Y++ + +S + L F+ +I+
Sbjct: 22 STRHKQAPTYLIDYHCNLLQNIEIHDSKNI-----RYSLSSVLSYHSLNPEFLKFSLSIT 76
Query: 181 TIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVKYKSNG 360
T +EPKNY QA++S W +AM+ EL AL+ N TW LT LP K IG KWVYK+KY S+G
Sbjct: 77 TEIEPKNYQQAAQSPHWIKAMQEELGALKMNKTWCLTPLPIGKFVIGSKWVYKIKYNSDG 136
Query: 361 SIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
+++RYKARLVAKGY Q EGLDYFDTF+ VA ++ VRL++A+A+ + WFLHQ
Sbjct: 137 TLQRYKARLVAKGYNQTEGLDYFDTFAPVAKLTIVRLLLALASTKNWFLHQ 187
>gb|KYP37906.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1097
Score = 176 bits (446), Expect = 4e-48
Identities = 89/171 (52%), Positives = 118/171 (69%)
Frame = +1
Query: 1 SSRSRSTPAYLQVYDCVLPPSMKHNSSAQFVSTDRKYNICNFISVNQLGSNHKHFTANIS 180
S+R R P+YL Y L + HNS + Y+I N IS + L + K F+ +IS
Sbjct: 583 STRPRKLPSYLHDYHHTLLTT--HNSPT---ISQPLYSIHNHISYSNLSPSQKAFSLSIS 637
Query: 181 TIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVKYKSNG 360
+I EP +Y +A + W+ A++ EL ALEKNNTWILT LPPNK +GCKWV+K+K+ S+G
Sbjct: 638 SIKEPNSYVEAIQDESWKTAIQTELTALEKNNTWILTPLPPNKQVVGCKWVFKLKFNSDG 697
Query: 361 SIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
+IER+KARLVAKGYTQ EGLDY DTFS V ++TVR ++AVA A+ W +HQ
Sbjct: 698 TIERHKARLVAKGYTQTEGLDYLDTFSPVVKMTTVRTLLAVATAKNWHIHQ 748
>emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]
Length = 1128
Score = 176 bits (445), Expect = 6e-48
Identities = 89/173 (51%), Positives = 118/173 (68%), Gaps = 2/173 (1%)
Frame = +1
Query: 1 SSRSRSTPAYLQVYDCVLPPSMKHNSSA--QFVSTDRKYNICNFISVNQLGSNHKHFTAN 174
S R++ P YLQ Y C + + A S+ + Y I +F+S ++L S HK F
Sbjct: 550 SERTKHLPKYLQNYYCGNMTKIDSATQAPSSCSSSGKPYCIFSFLSDSRLSSKHKAFIYV 609
Query: 175 ISTIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVKYKS 354
IS+ EPK Y Q WQ AM E+ AL+ N TW L LPPNK IGCKWVY+VK+K+
Sbjct: 610 ISSTFEPKTYKQXVSIPHWQTAMTDEIKALKHNKTWDLAILPPNKTAIGCKWVYRVKFKA 669
Query: 355 NGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
+GS+ERYKARLVAKGYTQ+EGLD+FDT+S VA ++TVR+++A+AAA+ W+LHQ
Sbjct: 670 DGSVERYKARLVAKGYTQQEGLDFFDTYSPVAKMTTVRVLLAIAAAKQWYLHQ 722
>gb|KYP64431.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 812
Score = 174 bits (441), Expect = 1e-47
Identities = 83/146 (56%), Positives = 109/146 (74%)
Frame = +1
Query: 76 SSAQFVSTDRKYNICNFISVNQLGSNHKHFTANISTIVEPKNYTQASKSTEWQEAMKAEL 255
+S+ +S + + + I+ N L S+H H+ ++ST EPK Y QA KS EW AMKAE+
Sbjct: 480 TSSPELSKGISHPLSSVINYNTLSSSHLHYVLSLSTHEEPKFYHQAVKSQEWVVAMKAEI 539
Query: 256 LALEKNNTWILTDLPPNKHCIGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDT 435
AL NNTW + DLP KH IGCKWVYK+KY+S+GS+ERYKARLVAKG+TQ EGLDYF+T
Sbjct: 540 DALTANNTWTIVDLPSGKHPIGCKWVYKIKYRSDGSVERYKARLVAKGFTQTEGLDYFET 599
Query: 436 FSLVANISTVRLVIAVAAAQGWFLHQ 513
+ V ++TVRL++AVA++Q WFLHQ
Sbjct: 600 CAPVEKLTTVRLLLAVASSQNWFLHQ 625
>gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1136
Score = 174 bits (441), Expect = 2e-47
Identities = 87/171 (50%), Positives = 120/171 (70%)
Frame = +1
Query: 1 SSRSRSTPAYLQVYDCVLPPSMKHNSSAQFVSTDRKYNICNFISVNQLGSNHKHFTANIS 180
S+R R P YLQ + + H+S T ++ + +FIS ++L + H+ +IS
Sbjct: 565 STRPRRPPTYLQDFHGAFTSTGPHSS------TGIRHPLHSFISYDRLSPSFHHYVFSIS 618
Query: 181 TIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVKYKSNG 360
++ +PKN+ +ASKS W +AM E+ ALE NNTW+LT LPP+K IGC+WVYKVK+K++G
Sbjct: 619 SVTKPKNFVEASKSDSWLKAMHEEISALEANNTWVLTTLPPHKTAIGCRWVYKVKHKADG 678
Query: 361 SIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
SI+RYKARLVAKGYTQ EGLD+FDTFS VA ++TVRL+I++AA L Q
Sbjct: 679 SIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLISLAAIHNCHLKQ 729
>gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1353
Score = 174 bits (440), Expect = 3e-47
Identities = 83/171 (48%), Positives = 115/171 (67%)
Frame = +1
Query: 1 SSRSRSTPAYLQVYDCVLPPSMKHNSSAQFVSTDRKYNICNFISVNQLGSNHKHFTANIS 180
S R ++ P YLQ Y C L S SS+ +Y I +++ + + F + IS
Sbjct: 777 SQRVKNRPGYLQDYHCTLAASKVDQSSST-----ARYPISDYLPYTSYSAVQQSFVSTIS 831
Query: 181 TIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVKYKSNG 360
+I+EP++Y A W+EA++AEL AL+K TWILTDLPPNK +GC+WV+KVKY ++G
Sbjct: 832 SIIEPRSYQDAINHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADG 891
Query: 361 SIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
S+ERYKARLVAKG+TQ GLDY DTFS V ++T+R+ +A+AAA W +HQ
Sbjct: 892 SVERYKARLVAKGFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQ 942
>gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1423
Score = 174 bits (440), Expect = 3e-47
Identities = 83/171 (48%), Positives = 115/171 (67%)
Frame = +1
Query: 1 SSRSRSTPAYLQVYDCVLPPSMKHNSSAQFVSTDRKYNICNFISVNQLGSNHKHFTANIS 180
S R ++ P YLQ Y C L S SS+ +Y I +++ + + F + IS
Sbjct: 847 SQRVKNRPGYLQDYHCTLAASKVDQSSST-----ARYPISDYLPYTSYSAVQQSFVSTIS 901
Query: 181 TIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVKYKSNG 360
+I+EP++Y A W+EA++AEL AL+K TWILTDLPPNK +GC+WV+KVKY ++G
Sbjct: 902 SIIEPRSYQDAINHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADG 961
Query: 361 SIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
S+ERYKARLVAKG+TQ GLDY DTFS V ++T+R+ +A+AAA W +HQ
Sbjct: 962 SVERYKARLVAKGFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQ 1012
>ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
from transposon TNT 1-94 [Gossypium raimondii]
Length = 683
Score = 172 bits (435), Expect = 3e-47
Identities = 90/170 (52%), Positives = 116/170 (68%), Gaps = 1/170 (0%)
Frame = +1
Query: 7 RSRSTPAYLQVYDCV-LPPSMKHNSSAQFVSTDRKYNICNFISVNQLGSNHKHFTANIST 183
R+R P+YLQ Y LP + H + ++I N IS + L H HFT IS
Sbjct: 119 RNRRPPSYLQDYQHYQLPAATNHPGTP--------HSIFNCISYHNLSPQHLHFTLAISA 170
Query: 184 IVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVKYKSNGS 363
+EPK Y QASK T W EAM+AE+ ALE+NNTW +T LPP K GCKWV++VK++++GS
Sbjct: 171 SIEPKTYKQASKFTHWNEAMQAEINALEQNNTWTMTTLPPGKTPXGCKWVFRVKHRADGS 230
Query: 364 IERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
ERYKARLVAKGYTQ G+DYFDTFS VA I+TVRL++A+A ++ W + Q
Sbjct: 231 TERYKARLVAKGYTQ-IGVDYFDTFSPVAKITTVRLLLALATSRHWHIQQ 279
>ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794221 [Glycine max]
Length = 1150
Score = 173 bits (439), Expect = 4e-47
Identities = 83/136 (61%), Positives = 104/136 (76%)
Frame = +1
Query: 106 KYNICNFISVNQLGSNHKHFTANISTIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWI 285
K+ I + IS N+L S++ F NIS EPK+Y +A K W +AM E+ ALE+NNTW+
Sbjct: 292 KHPISSVISYNKLSSSYHSFILNISANSEPKSYNEACKHDSWVQAMHDEISALERNNTWV 351
Query: 286 LTDLPPNKHCIGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTV 465
LTDLP +K+ IGCKWVYK+K+ S+GSIERYKARLVAKGYTQ EGLDY DTFS VA I+TV
Sbjct: 352 LTDLPQHKNVIGCKWVYKIKHNSDGSIERYKARLVAKGYTQIEGLDYLDTFSPVAKITTV 411
Query: 466 RLVIAVAAAQGWFLHQ 513
RL++A+AA W+L Q
Sbjct: 412 RLLLALAALNNWYLRQ 427
>gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1002
Score = 173 bits (438), Expect = 5e-47
Identities = 88/171 (51%), Positives = 117/171 (68%)
Frame = +1
Query: 1 SSRSRSTPAYLQVYDCVLPPSMKHNSSAQFVSTDRKYNICNFISVNQLGSNHKHFTANIS 180
S+R R P+YL Y L + HNS + Y+I N IS + L + K F+ +IS
Sbjct: 427 STRPRKLPSYLHDYHHTLLTT--HNSPT---ISQPLYSIHNHISYSNLSPSQKAFSLSIS 481
Query: 181 TIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVKYKSNG 360
+I EP +Y +A + W+ A++ EL ALEKNNTWILT LPPNK +GCKWV+K+K+ S+G
Sbjct: 482 SIKEPNSYVEAIQDESWKTAIQTELTALEKNNTWILTPLPPNKQVVGCKWVFKLKFNSDG 541
Query: 361 SIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
+IER+KARLVAKGYTQ E LDY DTFS V ++TVR ++AVA A+ W +HQ
Sbjct: 542 TIERHKARLVAKGYTQTETLDYLDTFSPVVKMTTVRTLLAVATAKNWHIHQ 592
>gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1013
Score = 172 bits (435), Expect = 1e-46
Identities = 88/172 (51%), Positives = 117/172 (68%), Gaps = 1/172 (0%)
Frame = +1
Query: 1 SSRSRSTPAYLQVYDC-VLPPSMKHNSSAQFVSTDRKYNICNFISVNQLGSNHKHFTANI 177
S+R R P+YL+ Y C +L P+ + NS F ++I + ++ + ++K F ++
Sbjct: 432 STRMRQPPSYLKDYHCSLLAPTGRINS---FSGISTPHSISSTLTYDFCSPSYKQFCLSV 488
Query: 178 STIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVKYKSN 357
ST EP YTQASK W AMK EL AL+ N TW + DLP K IGCKWVYK+KY S+
Sbjct: 489 STNFEPHTYTQASKYDCWIMAMKTELAALDMNQTWSIVDLPSGKRPIGCKWVYKIKYLSD 548
Query: 358 GSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
GSIERYKARLVAKGY+Q EGLDY DT+S VA ++TVR+++A+ A +GWFL Q
Sbjct: 549 GSIERYKARLVAKGYSQTEGLDYLDTYSPVAKLTTVRVLLALTAIKGWFLEQ 600
>gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1346
Score = 172 bits (435), Expect = 1e-46
Identities = 88/169 (52%), Positives = 110/169 (65%)
Frame = +1
Query: 7 RSRSTPAYLQVYDCVLPPSMKHNSSAQFVSTDRKYNICNFISVNQLGSNHKHFTANISTI 186
R R P +L Y C H S T KY + +F S+ L +HK F+ +I+
Sbjct: 798 RQRRAPLHLSDYVCHNTSPTSHESLTS--GTKSKYPLSSFHSLTLLSPSHKAFSMSITHC 855
Query: 187 VEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVKYKSNGSI 366
EP++Y +ASK W AMK EL AL KN TW + +LPP+ IGCKWVYKVK+K+NG I
Sbjct: 856 TEPQSYEEASKHEHWVTAMKEELNALAKNCTWKIVELPPHTKPIGCKWVYKVKHKANGQI 915
Query: 367 ERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
ERYKARLVAKGY Q EG+DYF+TFS VA I+TVR ++AVAA + W LHQ
Sbjct: 916 ERYKARLVAKGYNQVEGIDYFETFSPVAKITTVRTLLAVAAIKNWHLHQ 964
>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1427
Score = 172 bits (435), Expect = 1e-46
Identities = 89/176 (50%), Positives = 117/176 (66%), Gaps = 5/176 (2%)
Frame = +1
Query: 1 SSRSRSTPAYLQVYDCVL-----PPSMKHNSSAQFVSTDRKYNICNFISVNQLGSNHKHF 165
S+R + +PAYL+ Y C L PP KH +Y + +S + L +++ +
Sbjct: 844 STRHKCSPAYLKDYHCNLLIGVPPPEDKHI----------RYPLNTVLSYDSLSASYSRY 893
Query: 166 TANISTIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVK 345
+I+T VEP + QA K+ W EAM+AEL ALE N TW + LPP K IG KWVYK+K
Sbjct: 894 VLSITTHVEPHTFNQAVKNKVWVEAMQAELDALEHNKTWTIMPLPPGKTPIGSKWVYKIK 953
Query: 346 YKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
YKS+GSIERYKARLV KGYTQ +GLDYFDTF+ VA +STVR+++A+A+ Q W LHQ
Sbjct: 954 YKSDGSIERYKARLVVKGYTQIQGLDYFDTFAPVAKLSTVRMLLAIASCQHWELHQ 1009
>gb|KYP75700.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 174
Score = 158 bits (400), Expect = 1e-46
Identities = 70/130 (53%), Positives = 101/130 (77%)
Frame = +1
Query: 124 FISVNQLGSNHKHFTANISTIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPP 303
F+S + +H F NIS VEP+++ +A++ W++AM +EL AL++N+TW L LPP
Sbjct: 4 FLSYDNCSPDHISFCHNISAQVEPRSFKEANQIDCWKQAMASELQALDRNHTWTLVHLPP 63
Query: 304 NKHCIGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAV 483
K +GC+WVYK+K+K++GSIER+KARLVAKG+TQ EG+DYF+TFS V ++TVRL++A+
Sbjct: 64 GKKLVGCRWVYKIKHKTDGSIERFKARLVAKGFTQTEGVDYFETFSPVVKLTTVRLLLAL 123
Query: 484 AAAQGWFLHQ 513
A+A WFLHQ
Sbjct: 124 ASANNWFLHQ 133
>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
Length = 1125
Score = 171 bits (433), Expect = 2e-46
Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 4/175 (2%)
Frame = +1
Query: 1 SSRSRSTPAYLQVYDCVLPPSMKH----NSSAQFVSTDRKYNICNFISVNQLGSNHKHFT 168
S R P L+ Y C S H +SS Q +Y +CNF+S ++ H+ FT
Sbjct: 565 SQRPHHPPMALRDYVCNQVTSPNHLPPLSSSPQ---KGTRYPLCNFVSYHRYSPQHRSFT 621
Query: 169 ANISTIVEPKNYTQASKSTEWQEAMKAELLALEKNNTWILTDLPPNKHCIGCKWVYKVKY 348
A +S +EP +Y +A+ + WQEAM++EL LE N+TW LT LPP K IGC+WVYK+K
Sbjct: 622 AAVSQDIEPTSYAEATSHSHWQEAMQSELATLEANHTWSLTSLPPGKKPIGCRWVYKIKX 681
Query: 349 KSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQGWFLHQ 513
S+G+IER+KARLVAKGYTQ EG+DY DTFS A + VR ++A+AAAQ W LHQ
Sbjct: 682 HSDGTIERFKARLVAKGYTQLEGIDYHDTFSPTAKMIXVRCLLALAAAQNWSLHQ 736