BLASTX nr result
ID: Rehmannia27_contig00027002
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00027002
(3793 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera] 480 e-147
ref|XP_015386837.1| PREDICTED: uncharacterized mitochondrial pro... 431 e-136
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera] 442 e-135
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 413 e-135
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 416 e-133
ref|XP_008341155.1| PREDICTED: uncharacterized protein LOC103404... 427 e-133
gb|KYP35708.1| Copia protein [Cajanus cajan] 409 e-132
emb|CCH50966.1| T4.5 [Malus x robusta] 419 e-131
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] 443 e-130
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 444 e-130
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 441 e-130
gb|KYP34165.1| Copia protein [Cajanus cajan] 417 e-129
dbj|BAH94406.1| Os08g0544300 [Oryza sativa Japonica Group] 423 e-128
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 438 e-128
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 426 e-128
gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposo... 404 e-127
gb|AAB82754.1| retrofit [Oryza longistaminata] 437 e-127
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-... 438 e-127
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 431 e-127
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 436 e-127
>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
Length = 1002
Score = 480 bits (1235), Expect = e-147
Identities = 237/442 (53%), Positives = 308/442 (69%), Gaps = 1/442 (0%)
Frame = -2
Query: 3174 SFSPIPIAPTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKF 2995
S SP PTT QAL P+W M EEY AL++N+TW LVPF MNV+ SKWIFRVK+
Sbjct: 484 SVSPSDQLPTTVSQALKNPNWHTTMVEEYQALVRNNTWTLVPFHPSMNVIDSKWIFRVKY 543
Query: 2994 KVDGSVDRLKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNN 2815
DG++ R KARLVA+GFQQ AG++F DTF+P++K TIR++FTLA++ W++ Q+D NN
Sbjct: 544 NSDGTIQRYKARLVAKGFQQYAGVEFTDTFSPVIKASTIRVVFTLAITYNWEIRQIDFNN 603
Query: 2814 AFLKGDLKESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXX 2635
AFL G++ E+VY++QP G+V + P HVCKL ++LYGLKQAP++W+ KLR
Sbjct: 604 AFLNGEITETVYLSQPAGFVSTSHPQHVCKLQKALYGLKQAPRVWFHKLREALHTWGFIS 663
Query: 2634 XXXXXXLFFKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLG 2455
LF G L++LVYVDD+LIT ++V +V LI L N+F+LK LG V FLG
Sbjct: 664 STSDTSLFIYKHNGNFLLLLVYVDDLLITGNNVPLVQTLIQDLQNRFALKDLGLVKDFLG 723
Query: 2454 LEAHKVADGILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDGPLFDNPSVYRCI 2275
EA + G+ LTQ+KY +DLL+K M + P PTP K GP F +P++YR
Sbjct: 724 FEALRTTTGLHLTQSKYTTDLLIKTKMHSAKPVPTPMSAALKLHAASGPAFSDPTLYRST 783
Query: 2274 IGALQYLTLTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDM 2095
IGALQYLT TRPDI++ VNKLSQ+L P+ LHW ACKRVLR+L+G H GL F P +
Sbjct: 784 IGALQYLTYTRPDIAFAVNKLSQYLQQPTELHWTACKRVLRYLKGIVHRGLHFTP-ASSL 842
Query: 2094 ILECFTDADWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSK 1915
L+ +TDADWASSI DRRST+GYCV+LG NL W S+KQPVVARSST++EYR+LA A+ +
Sbjct: 843 HLQVYTDADWASSIDDRRSTTGYCVFLGTNLFTWSSRKQPVVARSSTKAEYRALAHASXE 902
Query: 1914 LVWITSLFQNL-VYLSNNPVFY 1852
+ W+ SLF L + L N PV +
Sbjct: 903 VAWLRSLFSELGISLVNTPVIW 924
Score = 140 bits (352), Expect = 5e-30
Identities = 112/401 (27%), Positives = 165/401 (41%), Gaps = 14/401 (3%)
Frame = -3
Query: 1370 SEFFSMMANLQLPTFPTFTVRLDRSNFSFWRTQVLATVRAHGFEDFLLGTTPPPAIFQDS 1191
SE S++ T +V+LDR+N++ WR+QVL + RAH + L+G P P F S
Sbjct: 26 SEVSSILTGQISSTLHPISVKLDRNNYTIWRSQVLPSARAHRLDQILIGKLPKPPRFSQS 85
Query: 1190 STSGNRVP--NPEYTIWMRKDQFLFSWLLSSISESMIGYISRCTTAADIWKKFDDLFRTQ 1017
++ + P NPEY W+ D FL SW+L+SISE+M G++ C T+A++W + LF
Sbjct: 86 TSVNSSQPTSNPEYDQWVILDXFLLSWILASISEAMYGHVVNCQTSAEVWSVLEKLF--- 142
Query: 1016 SKTXXXXXXXXXXXXXKGDLSVEDYILQMTGIANQMRTAGQXXXXXXXXXXXLNGLTPEF 837
V DY N T
Sbjct: 143 ---------------------VSDY-------------------------KSKNSSTTVH 156
Query: 836 ESVVVVLTSRIGNLSISEMQFVLQSHELRLNQHHSSVTNTLQAFNLQTGPSTPSAHIADK 657
+++ R +S+ E+ ++LQSHE+RL Q L A ++ P P+AHI
Sbjct: 157 ATII---KERSEAISLQEVHYLLQSHEIRLEQ--------LSAASVIDVP--PAAHIT-V 202
Query: 656 KPFQNHSXXXXXXXXXXXXXXXXXXXXXXXGARIICQICGKNNHIASKCFKRFDQTYSG- 480
QN + +RI+CQ+CGK H A KCF RFD +
Sbjct: 203 GGVQNSNTNNGQFRGSSSKNFRPRNVRNPQTSRIVCQLCGKMGHTAMKCFHRFDVYFQSP 262
Query: 479 -------LDSLH--TSPGFSPQP--*ANYTTSAVPNPMPLIQDXXXXXXXXXXXXADNTA 333
SLH P P P Y ++ P IQ+
Sbjct: 263 PRAQNQQFSSLHQPQQPQLRPPPLHQPQYYSTGPLVPSRPIQNSHQQLDSTSTSPHAYIV 322
Query: 332 GLNASSSTGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLV 210
+ S+T WF+DSG+THH+T++ L + Y G +V
Sbjct: 323 APDLDSNT-SWFVDSGATHHMTTDSNTLNVSDHYCGXGNVV 362
Score = 101 bits (252), Expect = 4e-18
Identities = 50/92 (54%), Positives = 67/92 (72%)
Frame = -1
Query: 1897 LISKLGLSVKQPCVLWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVP 1718
L S+LG+S+ V+WCDN GA LA+NP FH+RTKHIE+DV ++RE+V +K++ V YVP
Sbjct: 909 LFSELGISLVNTPVIWCDNQGAGALAANPVFHSRTKHIEVDVXYVREQVLDKKLVVSYVP 968
Query: 1717 SEDQTADILTKSLSILRFQRLSNQLCLQLFPG 1622
S +Q AD+ TK LSI RFQ L +L L + G
Sbjct: 969 SVEQXADLFTKPLSIPRFQYLLTKLNLXVSLG 1000
>ref|XP_015386837.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Citrus sinensis]
Length = 422
Score = 431 bits (1107), Expect = e-136
Identities = 219/419 (52%), Positives = 285/419 (68%), Gaps = 1/419 (0%)
Frame = -2
Query: 3105 AMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDRLKARLVARGFQQNAG 2926
AM +E AL N TW LVP +V +KW+FRVK+ DGSV + KARLVA+GF Q G
Sbjct: 2 AMTDELHALRNNETWTLVPAELATKIVGNKWVFRVKYNPDGSVSKYKARLVAKGFHQTYG 61
Query: 2925 IDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLKESVYMAQPEGYVDPT 2746
+DFF+TF+PIVKP TIRI+ +LAV W + Q+DVNNAFL G L E V+M QPEG++D
Sbjct: 62 VDFFETFSPIVKPCTIRIILSLAVINHWTIRQLDVNNAFLNGVLTEEVFMHQPEGFIDSQ 121
Query: 2745 KPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLFFKNSGGALLMVLVYV 2566
PT+VCKL ++L GLKQAP+ WYD+LR LF K++G +L++L+YV
Sbjct: 122 HPTYVCKLNKALCGLKQAPRAWYDRLRGSLLQWGFQTSRSDTSLFLKHTGSDILVILIYV 181
Query: 2565 DDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKVADGILLTQTKYISDLLV 2386
DDIL+T A + +I LL ++F+LK LG+ NYFLGLE + G+ L+QTKY+ D+L
Sbjct: 182 DDILVTGSSYAQIEKIIALLGSEFALKDLGDFNYFLGLEVTPSSAGLHLSQTKYVGDILK 241
Query: 2385 KASMENCSPAPTPCCPNSKFSLHDGPLFDNPSVYRCIIGALQYLTLTRPDISYIVNKLSQ 2206
KA M + TP K G LF+NPS+YR IIG+LQY+TLTRPDI++ VNKLSQ
Sbjct: 242 KAHMLDSKGCNTPMSVADKLYKDKGKLFENPSLYRSIIGSLQYVTLTRPDIAFTVNKLSQ 301
Query: 2205 FLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECFTDADWASSIHDRRSTSGY 2026
FL +P+VLHW+ACKRVLR+LQ G+ F + L F+DADW S DRR Y
Sbjct: 302 FLAAPTVLHWQACKRVLRYLQCKATYGIQFYN-SKSFSLTAFSDADWGSDPDDRRFVGRY 360
Query: 2025 CVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITSLFQNL-VYLSNNPVFY 1852
C++LG NL++W SKKQ VV+RSS ESEYR+L L TS+++WI+ L Q L + L+N PV Y
Sbjct: 361 CIFLGSNLVSWSSKKQNVVSRSSAESEYRALTLTTSEVLWISYLLQELRIQLTNTPVLY 419
>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
Length = 773
Score = 442 bits (1137), Expect = e-135
Identities = 221/433 (51%), Positives = 296/433 (68%)
Frame = -2
Query: 3150 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 2971
P T QA SW AM+ EY AL++N+TW LVP ++V +WI+++K++ DGS+DR
Sbjct: 206 PRTYSQAFKNDSWVQAMNSEYQALLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDR 265
Query: 2970 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 2791
KARLVA+GF Q GID+FDTF+P+VKP TIR++ LAVS W V Q+DV N FL GDL+
Sbjct: 266 HKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVENGFLNGDLE 325
Query: 2790 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLF 2611
E V+M QP+G+V+PT PT+VCKL ++LYGLKQAP+ W+ KLR LF
Sbjct: 326 EEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTSLF 385
Query: 2610 FKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKVAD 2431
++ +L++LVYVDDIL+T + +VSH I+ L KF+L+ LG ++YFLG++A ++
Sbjct: 386 IFHTATDILILLVYVDDILVTGSNPTLVSHFISYLRTKFALRDLGPLSYFLGIQAQQLGS 445
Query: 2430 GILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDGPLFDNPSVYRCIIGALQYLT 2251
+ L Q KYI+DLL + ME PAPTP S DG +PS YR +GALQY+T
Sbjct: 446 VLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGVSLSDPSEYRRTVGALQYVT 505
Query: 2250 LTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECFTDA 2071
LTRPDI++ VNK QF+ PS +HW A KR+LR+L+GT HLGL F+P M + ++DA
Sbjct: 506 LTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYLKGTIHLGLHFQP-AASMEXQGYSDA 564
Query: 2070 DWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITSLF 1891
DWAS DRRSTSGYCV+LG NLI+W S KQ +V++SS ESEYR L T++LVWI SL
Sbjct: 565 DWASCPDDRRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLL 624
Query: 1890 QNLVYLSNNPVFY 1852
Q L ++ P+ +
Sbjct: 625 QELCLPTSPPILW 637
Score = 131 bits (330), Expect = 1e-27
Identities = 60/112 (53%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = -3
Query: 3749 LAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPYL 3570
+AQ+ LP K+W AF A +LIN LP+ LHFQSP Q LF+K P+Y L++FGC CFP L
Sbjct: 1 MAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSL 60
Query: 3569 RPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPS-GRLYIAKTVAFNETEFPY 3417
RPY KL +R++ C+FL Y+P HKGY CL S R+YI++ V F+E+ FP+
Sbjct: 61 RPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPF 112
Score = 94.7 bits (234), Expect = 4e-16
Identities = 47/94 (50%), Positives = 65/94 (69%)
Frame = -1
Query: 1897 LISKLGLSVKQPCVLWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVP 1718
L+ +L L P +LWCDN A LA+NP FH+R+KHIE+D+HFIREKV +++++ YVP
Sbjct: 623 LLQELCLPTSPP-ILWCDNQSAAHLAANPVFHSRSKHIELDLHFIREKVLRQELQICYVP 681
Query: 1717 SEDQTADILTKSLSILRFQRLSNQLCLQLFPGSV 1616
S DQ ADI TK L I +F L ++L + P S+
Sbjct: 682 SGDQLADIFTKHLPITQFCNLRSKLTVTYPPLSL 715
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 413 bits (1062), Expect(3) = e-135
Identities = 204/423 (48%), Positives = 281/423 (66%)
Frame = -2
Query: 3150 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 2971
P++ AL WK AM EY AL +N+TW LVP + KW+++ K DG+V +
Sbjct: 937 PSSVSAALQQDEWKKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQK 996
Query: 2970 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 2791
KARLVA+GF Q AG DF +TF+P+VKP T+R++FT+A+SR W + Q+DVNNAFL GDL+
Sbjct: 997 YKARLVAKGFHQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQ 1056
Query: 2790 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLF 2611
E V+M QP+G++D P VC+L ++LYGLKQAP+ W++KL LF
Sbjct: 1057 EEVFMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLF 1116
Query: 2610 FKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKVAD 2431
+ + + VLVYVDDIL+ D A ++ LI L+++FSLK LGEV+YFLG++ +
Sbjct: 1117 LRFTPNHITYVLVYVDDILVIGSDTAAITSLIAQLNSEFSLKDLGEVHYFLGIQVSHTNN 1176
Query: 2430 GILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDGPLFDNPSVYRCIIGALQYLT 2251
G+ L+QTKYI DLL K M +C PA TP K + DG ++ YR +GALQY+T
Sbjct: 1177 GLHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRVGDGDPVEDLHGYRSTVGALQYVT 1236
Query: 2250 LTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECFTDA 2071
+TRP++S+ VNK+ QF+ +P+ HWK KR+LR+LQGT GL + + ++ L F DA
Sbjct: 1237 ITRPELSFSVNKVCQFMQNPTEEHWKVVKRILRYLQGTLQHGLHLKK-SSNLDLIGFCDA 1295
Query: 2070 DWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITSLF 1891
DWAS + DRRSTSG+CV+LG NLI+W SKKQ +V+RSS E EYRSLA +++ W+ SL
Sbjct: 1296 DWASDLDDRRSTSGHCVFLGPNLISWQSKKQHIVSRSSIEIEYRSLAGLVAEITWLRSLL 1355
Query: 1890 QNL 1882
L
Sbjct: 1356 SEL 1358
Score = 99.4 bits (246), Expect(3) = e-135
Identities = 43/88 (48%), Positives = 67/88 (76%)
Frame = -1
Query: 1897 LISKLGLSVKQPCVLWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVP 1718
L+S+L L + +P ++WCDN + L++NP HARTKHIE+D++F+REKV K++EVR+VP
Sbjct: 1354 LLSELQLPLAKPPLVWCDNLSTVLLSANPVLHARTKHIELDLYFVREKVIRKEVEVRHVP 1413
Query: 1717 SEDQTADILTKSLSILRFQRLSNQLCLQ 1634
S DQ AD+LTK++S +F ++L ++
Sbjct: 1414 SADQLADVLTKTVSSTQFIEFRHKLRIE 1441
Score = 23.9 bits (50), Expect(3) = e-135
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -3
Query: 3224 MVTRSKNGISKPK 3186
M+TR+K+GI KPK
Sbjct: 916 MITRAKSGIVKPK 928
Score = 164 bits (415), Expect = 3e-37
Identities = 75/125 (60%), Positives = 93/125 (74%)
Frame = -3
Query: 3791 ERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDY 3612
ERKH+ IVE GLTLL ASLP KFW ++F +L NRLP++ LH + P + LF PDY
Sbjct: 683 ERKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDY 742
Query: 3611 TFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPSGRLYIAKTVAFNE 3432
+FLK+FGC+CFP LRPYNT KLQ+R+ +C FL YS HKGYKC+ +GR+YI+ V FNE
Sbjct: 743 SFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIFNE 802
Query: 3431 TEFPY 3417
T FPY
Sbjct: 803 TSFPY 807
Score = 82.4 bits (202), Expect(2) = 3e-17
Identities = 53/159 (33%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Frame = -3
Query: 551 CQICGKNNHIASKCFKRFDQTYS---GLDSLHTSP----GFSPQP*ANYTTSAVPNPMPL 393
CQ+CGK H+ ++C+ RFD T+ L S ++SP FSPQ TS V
Sbjct: 310 CQLCGKIGHVVAQCYYRFDHTFQVPQNLSSRNSSPRAYYSFSPQVNGVIPTSEV------ 363
Query: 392 IQDXXXXXXXXXXXXADNTAGLNASSSTGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQL 213
S +W+ DSG+++HVT N NL + + G+ Q+
Sbjct: 364 -------------------------FSDDNWYPDSGASNHVTPNPENLMKSAEFAGQNQV 398
Query: 212 VVGNGSSASISKVGSTQFPSLNPSKILTLKHVLFVPDVT 96
VGNG+ SI +G ++F S SK L L H+L VP +T
Sbjct: 399 HVGNGTGLSIKHIGQSEFLSPFSSKPLLLNHLLHVPSIT 437
Score = 37.4 bits (85), Expect(2) = 3e-17
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2
Query: 99 YYEDNHVFIEFHESYCLVKDQQTHQVLLRGLLK 1
+ +DN VF EFH C VKDQ T VL+ G ++
Sbjct: 446 FAKDNKVFFEFHSDSCFVKDQVTQAVLMVGKVR 478
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 416 bits (1068), Expect(3) = e-133
Identities = 213/426 (50%), Positives = 281/426 (65%), Gaps = 3/426 (0%)
Frame = -2
Query: 3150 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 2971
P T Q+A+S P WK AMDEE+ ALMKN TW LV + V +W+F++K DGSV R
Sbjct: 747 PNTFQEAISHPKWKEAMDEEFRALMKNKTWSLVSLPTNRTSVGCRWVFKLKRNPDGSVSR 806
Query: 2970 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 2791
KARLVA+G+ Q G DF++TF+P+VKP TIR++ +AVS+ W + Q+DVNNAFL G+L+
Sbjct: 807 YKARLVAKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVSQSWCIRQLDVNNAFLNGELQ 866
Query: 2790 ESVYMAQPEGYVDPTKPTH--VCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXX 2617
E VYM QP G+ T VCKL ++LYGLKQAP+ W+DKL+
Sbjct: 867 EEVYMDQPPGFDGKTNQEQKLVCKLHKALYGLKQAPRAWFDKLKISLQQFGFSSTKSDQS 926
Query: 2616 LFFKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKV 2437
LF + + + L VLVYVDDI++T + LI+ L FSLK LGE++YFLG+E K
Sbjct: 927 LFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGLFSLKDLGELSYFLGIEVKKT 986
Query: 2436 ADGIL-LTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDGPLFDNPSVYRCIIGALQ 2260
ADG L L+Q KYI DLL K M+ PTP K S G DN YR ++GALQ
Sbjct: 987 ADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPMLSGLKLSAGMGDPIDNVFEYRSVVGALQ 1046
Query: 2259 YLTLTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECF 2080
Y+T+TRP+I++ VNK+ QF+ P HWKA KR+LR+L GT LG++ +P + M L F
Sbjct: 1047 YITITRPEIAFSVNKVCQFMQKPLDTHWKAVKRILRYLNGTTDLGIVLKP-SETMNLVGF 1105
Query: 2079 TDADWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWIT 1900
DADW S + DRRSTSG+CV+LG++L++W SKKQ +RSSTE+EYRSLA TS+++W+
Sbjct: 1106 CDADWGSDVDDRRSTSGHCVFLGKSLVSWSSKKQHTTSRSSTEAEYRSLASLTSEMLWLQ 1165
Query: 1899 SLFQNL 1882
SL L
Sbjct: 1166 SLLSEL 1171
Score = 89.7 bits (221), Expect(3) = e-133
Identities = 38/85 (44%), Positives = 60/85 (70%)
Frame = -1
Query: 1897 LISKLGLSVKQPCVLWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVP 1718
L+S+L + V+WCDN ++L++NP H+RTKH+E+D++F+REKV +++ V +VP
Sbjct: 1167 LLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMELDLYFVREKVMERKLVVNHVP 1226
Query: 1717 SEDQTADILTKSLSILRFQRLSNQL 1643
+EDQ AD+ TK LS F +L +L
Sbjct: 1227 TEDQVADVFTKPLSFRFFDKLREKL 1251
Score = 25.4 bits (54), Expect(3) = e-133
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3
Query: 3224 MVTRSKNGISKP 3189
MVTRSKNGI KP
Sbjct: 724 MVTRSKNGIFKP 735
Score = 173 bits (438), Expect = 4e-40
Identities = 79/125 (63%), Positives = 97/125 (77%)
Frame = -3
Query: 3791 ERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDY 3612
ERKH+HIVE GLTLLAQASLP K+W DAF A FLINRLP+ L + PY+ LFN P+Y
Sbjct: 478 ERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNY 537
Query: 3611 TFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPSGRLYIAKTVAFNE 3432
+ LK+FGC CFP+LRPYN KL FR+S C FL YS HKGYKCL+ GR++I+++V F+E
Sbjct: 538 SQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVFDE 597
Query: 3431 TEFPY 3417
T FP+
Sbjct: 598 TRFPF 602
Score = 78.2 bits (191), Expect(2) = 5e-11
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Frame = -3
Query: 551 CQICGKNNHIASKCFKRFDQTYSG-LDSLHTSPGFSPQP*ANYTTSAVPNPMPLIQDXXX 375
CQ+C K H +CF R+D + G + + +PG N + ++ + +
Sbjct: 183 CQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGSISSAGNVNLTEYD 242
Query: 374 XXXXXXXXXADNTAGLNASSSTGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGS 195
+ WF DSG+T+HVT +LGNL + Y G +++ +GNG+
Sbjct: 243 AQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGNSKIHMGNGT 302
Query: 194 SASISKVGSTQFP-SLNPSKILTLKHVLFVPDV 99
IS +G + FP S +P+K+L LK++L VP +
Sbjct: 303 GLKISHIGLSVFPSSSSPNKVLFLKNILRVPAI 335
Score = 20.4 bits (41), Expect(2) = 5e-11
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 99 YYEDNHVFIEFH 64
+ DN+V+ EFH
Sbjct: 345 FXRDNNVYFEFH 356
>ref|XP_008341155.1| PREDICTED: uncharacterized protein LOC103404078 [Malus domestica]
Length = 986
Score = 427 bits (1099), Expect(3) = e-133
Identities = 218/433 (50%), Positives = 280/433 (64%)
Frame = -2
Query: 3174 SFSPIPIAPTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKF 2995
S + +P PTT QA P+W AM +E+ AL TW LVPF H+N+V KW+FR+K
Sbjct: 160 SIACLPSTPTTFLQASKNPNWMQAMKDEFQALKSTGTWXLVPFQSHLNLVGCKWVFRLKH 219
Query: 2994 KVDGSVDRLKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNN 2815
K DGS++R KARLVA+GF Q G+DF +TF+P KP TI I+ ++AVS W VHQ+DV+N
Sbjct: 220 KPDGSIERYKARLVAKGFHQQEGLDFSETFSPXAKPTTIHILLSIAVSYDWFVHQLDVSN 279
Query: 2814 AFLKGDLKESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXX 2635
AFL G LKE VYM QP G+VD +KPTHVCKL RSLYGLKQAP+ WYD
Sbjct: 280 AFLHGTLKEDVYMVQPPGFVDQSKPTHVCKLQRSLYGLKQAPRAWYDAFHKAILSLGFSS 339
Query: 2634 XXXXXXLFFKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLG 2455
LF K + +LVYVDDI+IT V +IT L F +K LG+++YFLG
Sbjct: 340 SHSDSSLFIKKD-STITFILVYVDDIIITGSSTTVCQSIITQLQAMFPVKDLGDIHYFLG 398
Query: 2454 LEAHKVADGILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDGPLFDNPSVYRCI 2275
+E H+ A G+ L Q+KY DLL K+ M P TP S H G +PS YR
Sbjct: 399 IEVHRSAKGLFLHQSKYAIDLLKKSDMLGVKPCSTPV--GSAKLDHSGSPLSDPSFYRST 456
Query: 2274 IGALQYLTLTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDM 2095
+GALQYLT TRPD+++ VN++ Q +HSP +H +A KR+LR+L+GT H GL G
Sbjct: 457 VGALQYLTWTRPDLAFAVNQVCQHMHSPRTVHLQAVKRILRYLKGTLHFGLWL--TKGPQ 514
Query: 2094 ILECFTDADWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSK 1915
L ++DADWA + DRRSTSGYCV+LG NLI+W +KKQ VARSSTE+EYRSLA ++
Sbjct: 515 YLTAWSDADWAGCLVDRRSTSGYCVFLGPNLISWSAKKQCXVARSSTEAEYRSLAHTAAE 574
Query: 1914 LVWITSLFQNLVY 1876
L W+ + Q+L +
Sbjct: 575 LSWVCQVLQDLSF 587
Score = 77.8 bits (190), Expect(3) = e-133
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = -1
Query: 1873 VKQPCVLWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVPSEDQTADI 1694
+K P + +CDN AI LA NP FHARTKH+EID H+I EKV ++ V +V S Q ADI
Sbjct: 590 LKTPAI-FCDNKSAIALAFNPVFHARTKHVEIDYHYIXEKVLCGKVSVHHVASLLQIADI 648
Query: 1693 LTKSLSILRFQRLSNQLCL 1637
TKSL RF L+++L +
Sbjct: 649 FTKSLPSDRFAXLASKLSI 667
Score = 23.1 bits (48), Expect(3) = e-133
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3
Query: 3224 MVTRSKNGISKPK 3186
M+TR+K GI KPK
Sbjct: 133 MITRAKAGIHKPK 145
>gb|KYP35708.1| Copia protein [Cajanus cajan]
Length = 493
Score = 409 bits (1052), Expect(2) = e-132
Identities = 200/407 (49%), Positives = 280/407 (68%)
Frame = -2
Query: 3102 MDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDRLKARLVARGFQQNAGI 2923
M +E AL NHTW LVP+ +++ SKW+F+ K+K DG+++R KARLVA+GFQQ AG+
Sbjct: 1 MHKEIQALNLNHTWTLVPYQAQESIIDSKWVFKTKYKADGTIERRKARLVAKGFQQTAGL 60
Query: 2922 DFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLKESVYMAQPEGYVDPTK 2743
D+ +TF+P+VK TIRI+ +AV W+V Q+D+NNAFL G LK++VYM QPEG+ DPTK
Sbjct: 61 DYEETFSPVVKSSTIRIILAIAVHLNWEVKQLDINNAFLNGYLKQTVYMNQPEGFADPTK 120
Query: 2742 PTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLFFKNSGGALLMVLVYVD 2563
P HVCKL +++YGLKQAP+ W+D L+ LF + +L+YVD
Sbjct: 121 PNHVCKLSKAIYGLKQAPRAWFDSLKNALLKWGFQNTKSDTSLFTLRGKNHITFLLIYVD 180
Query: 2562 DILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKVADGILLTQTKYISDLLVK 2383
DI++T ++ + + L+ FSLK LG+++YFLG+E H+ A G+ L Q+KYI DLL K
Sbjct: 181 DIIVTGNNTKFLEAFVKQLNIVFSLKDLGQLHYFLGIEVHRDATGMYLKQSKYIKDLLRK 240
Query: 2382 ASMENCSPAPTPCCPNSKFSLHDGPLFDNPSVYRCIIGALQYLTLTRPDISYIVNKLSQF 2203
MEN SP PTP +F++ +G NP+ +R IGALQYLT TRPDI++ VNKLSQF
Sbjct: 241 FKMENASPCPTPMVTGKQFTI-EGEKLKNPTEFRQAIGALQYLTNTRPDIAFSVNKLSQF 299
Query: 2202 LHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECFTDADWASSIHDRRSTSGYC 2023
+ SP++ HW+ KR+LR+LQGT H L + + + + F+DADWA+S+ DR+S +G C
Sbjct: 300 MSSPTLDHWQGIKRILRYLQGTMHYCLHIK-CSAYLDIAGFSDADWATSVDDRKSMAGQC 358
Query: 2022 VYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITSLFQNL 1882
V+LG L++W S+KQ VV+RSSTESEYR+LA +++ W SL L
Sbjct: 359 VFLGDTLVSWSSRKQQVVSRSSTESEYRALADLAAEITWTRSLLTEL 405
Score = 92.8 bits (229), Expect(2) = e-132
Identities = 45/85 (52%), Positives = 60/85 (70%)
Frame = -1
Query: 1897 LISKLGLSVKQPCVLWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVP 1718
L+++L L + +LWCDN A LASNP HARTKHIE DVH+IR++V ++ V YVP
Sbjct: 401 LLTELKLPQPRKPILWCDNLSAKALASNPVMHARTKHIETDVHYIRDQVLQDKVIVAYVP 460
Query: 1717 SEDQTADILTKSLSILRFQRLSNQL 1643
S DQ AD LTK+L+ RF +L ++L
Sbjct: 461 SADQIADCLTKALTHTRFNQLRDKL 485
>emb|CCH50966.1| T4.5 [Malus x robusta]
Length = 1670
Score = 419 bits (1077), Expect(3) = e-131
Identities = 215/442 (48%), Positives = 282/442 (63%), Gaps = 1/442 (0%)
Frame = -2
Query: 3174 SFSPIPIAPTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKF 2995
S + +P P+T QA W AM E+ AL TW+LVP N+V KW+F+VK
Sbjct: 1141 SLTALPPTPSTFLQASKSSHWMEAMQFEFQALQSTGTWELVPNHSTYNIVGCKWVFKVKH 1200
Query: 2994 KVDGSVDRLKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNN 2815
K DG+++R KARLVA+GF Q G+DF +TF+P+ KP TIRI+ ++AVS W +HQ+DV+N
Sbjct: 1201 KPDGTIERYKARLVAKGFHQQEGLDFSETFSPVAKPTTIRILLSIAVSYYWFIHQLDVSN 1260
Query: 2814 AFLKGDLKESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXX 2635
AFL G LKE VYM QP G+VDP+KP HVCKL +SLYGLKQAP+ WY+
Sbjct: 1261 AFLHGHLKEDVYMVQPPGFVDPSKPHHVCKLRKSLYGLKQAPRAWYEAFYTAILSLGFSS 1320
Query: 2634 XXXXXXLFFKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLG 2455
LF K ++ +LVYVDDI+IT V +I+ L F +K LG++NYFLG
Sbjct: 1321 SHSDTSLFIKRD-TSITFILVYVDDIIITGSSVTECQSIISQLQTMFPVKDLGDINYFLG 1379
Query: 2454 LEAHKVADGILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDGPLFDNPSVYRCI 2275
+E HK G+LL Q KY DLL K M P TP SK H G L +P+ YR
Sbjct: 1380 IEVHKSDQGLLLHQAKYALDLLKKTDMLGAKPCATP-VSTSKLD-HSGTLLSDPTSYRST 1437
Query: 2274 IGALQYLTLTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDM 2095
+GALQYLT TRPD+++ VN++ Q++HSP +H +A KR+LR+L+GT LGL F G
Sbjct: 1438 VGALQYLTWTRPDLAFAVNQVCQYMHSPQTIHLQAVKRILRYLKGTVDLGLWF--TKGSQ 1495
Query: 2094 ILECFTDADWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSK 1915
L ++DADWA DRRSTSGYCV+LG NLI+W +KKQ VARSSTE+EYRSLA ++
Sbjct: 1496 CLTAWSDADWAGCPVDRRSTSGYCVFLGSNLISWSAKKQATVARSSTEAEYRSLANTAAE 1555
Query: 1914 LVWITSLFQNLVY-LSNNPVFY 1852
+ W+ + ++ + L PV Y
Sbjct: 1556 ITWVCKILHDISFPLLKTPVIY 1577
Score = 79.0 bits (193), Expect(3) = e-131
Identities = 40/75 (53%), Positives = 52/75 (69%)
Frame = -1
Query: 1858 VLWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVPSEDQTADILTKSL 1679
V++CDN I LA NP FHARTKH+EID H+IREKV I V++V S Q ADI TK L
Sbjct: 1575 VIYCDNKSVIALAFNPVFHARTKHVEIDYHYIREKVLLGHIGVQHVASLLQIADIFTKPL 1634
Query: 1678 SILRFQRLSNQLCLQ 1634
+ RF L+++L ++
Sbjct: 1635 AADRFAALTSKLSVR 1649
Score = 23.1 bits (48), Expect(3) = e-131
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3
Query: 3224 MVTRSKNGISKPK 3186
M+TR+K GI KPK
Sbjct: 1114 MITRAKAGIHKPK 1126
Score = 139 bits (350), Expect = 1e-29
Identities = 66/129 (51%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Frame = -3
Query: 3791 ERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDY 3612
ERKH+H+VE G TLL+Q+ LP +FW +AF +LINRLP + SP++ LF+ +P Y
Sbjct: 894 ERKHRHVVEMGRTLLSQSDLPTQFWVEAFQTVVYLINRLPPQSSVI-SPWELLFHASPKY 952
Query: 3611 TFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHP-SGRLYIAKTVAFN 3435
LK FGCAC+P+L+PY+ KL F++ +C+FL YS H GY+C P S RLYI++ V F+
Sbjct: 953 HTLKAFGCACYPWLQPYSRDKLDFKSKQCVFLGYSLNHSGYRCWDPISNRLYISRHVVFD 1012
Query: 3434 ETEFPYPLL 3408
E+ FPY L
Sbjct: 1013 ESLFPYKSL 1021
Score = 75.9 bits (185), Expect = 4e-10
Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 11/228 (4%)
Frame = -3
Query: 1358 SMMANLQLPTFPTFTV---------RLDRSNFSFWRTQVLATVRAHGFEDFLLGTT--PP 1212
S+++N + T T ++ +L+R N+ WR+ + ++ + G PP
Sbjct: 252 SVLSNPPIMTLGTISITNVAGMVPTKLNRQNYITWRSLFIPVLKRFKLIGLVNGEDLCPP 311
Query: 1211 PAIFQDSSTSGNRVPNPEYTIWMRKDQFLFSWLLSSISESMIGYISRCTTAADIWKKFDD 1032
P + SG VPN + W +DQ L W+ S++S+ ++ + +W+ +
Sbjct: 312 PFV---RDPSGTCVPNASFETWCERDQILMIWINSTLSKDLLPLTIGMEDSRSLWQSLER 368
Query: 1031 LFRTQSKTXXXXXXXXXXXXXKGDLSVEDYILQMTGIANQMRTAGQXXXXXXXXXXXLNG 852
F S+T KGD S+ D++ + I+N++ AG+ L+G
Sbjct: 369 RFSGASRTHVHSLRSKIQTIHKGDSSMTDFLNSIKEISNKLAAAGEPLSESDLVAYILSG 428
Query: 851 LTPEFESVVVVLTSRIGNLSISEMQFVLQSHELRLNQHHSSVTNTLQA 708
L E+ES V + +R +++ E+ +L S E+ L + + +++ A
Sbjct: 429 LPDEYESFVDSIETRNESVTADELHGLLLSKEISLQKRKTRASSSSNA 476
>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
Length = 1334
Score = 443 bits (1140), Expect = e-130
Identities = 222/433 (51%), Positives = 297/433 (68%)
Frame = -2
Query: 3150 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 2971
P T QA SW AM+ EY AL++N+TW LVP ++V +WI+++K++ DGS+DR
Sbjct: 859 PRTYSQAXKNDSWVQAMNSEYQALLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDR 918
Query: 2970 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 2791
KARLVA+GF Q GID+FDTF+P+VKP TIR++ LAVS W V Q+DV N FL GDL+
Sbjct: 919 HKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVENGFLNGDLE 978
Query: 2790 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLF 2611
E V+M QP+G+V+PT PT+VCKL ++LYGLKQAP+ W+ KLR LF
Sbjct: 979 EEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTSLF 1038
Query: 2610 FKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKVAD 2431
++ +L++LVYVDDIL+T + +VSH I+ L KF+L+ LG ++YFLG++A ++
Sbjct: 1039 IFHTATDILILLVYVDDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFLGIQAQQLGS 1098
Query: 2430 GILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDGPLFDNPSVYRCIIGALQYLT 2251
+ L Q KYI+DLL + ME PAPTP S DG +PS YR +GALQY+T
Sbjct: 1099 VLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGMSLSDPSEYRRTVGALQYVT 1158
Query: 2250 LTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECFTDA 2071
LTRPDI++ VNK QF+ PS +HW A KR+LR+L+GT HLGL F+P M L+ ++DA
Sbjct: 1159 LTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYLKGTIHLGLHFQP-AASMELQGYSDA 1217
Query: 2070 DWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITSLF 1891
DWAS DRRSTSGYCV+LG NLI+W S KQ +V++SS ESEYR L T++LVWI SL
Sbjct: 1218 DWASCPDDRRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLL 1277
Query: 1890 QNLVYLSNNPVFY 1852
Q L ++ P+ +
Sbjct: 1278 QELCLPTSPPILW 1290
Score = 154 bits (389), Expect(2) = 1e-38
Identities = 115/426 (26%), Positives = 181/426 (42%), Gaps = 16/426 (3%)
Frame = -3
Query: 1313 VRLDRSNFSFWRTQVLATVRAHGFEDFLLGTTPPPAIFQDSSTSGNRVPNPEYTIWMRKD 1134
++LDRSN+ W+TQ+ V A+GFED++ GT P +G+ NP++ W R D
Sbjct: 32 IKLDRSNYILWKTQMENVVYANGFEDYIEGTKSCPP---KELPTGDL--NPDFVQWRRFD 86
Query: 1133 QFLFSWLLSSISESMIGYISRCTTAADIWKKFDDLFRTQSKTXXXXXXXXXXXXXKGDLS 954
+ + SW+ S+++ ++G I T+ + W +F SK KG +
Sbjct: 87 RMVLSWMYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKKGGDA 146
Query: 953 VEDYILQMTGIANQMRTAGQXXXXXXXXXXXLNGLTPEFESVVVVLTSRIGNLSISEMQF 774
+ DYIL+M I++ + G+ L GL P++ S+V LT+R +LS+ +
Sbjct: 147 MLDYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDYNSIVASLTAREDDLSLHSVHS 206
Query: 773 VLQSHELRLNQHHSSVTN-TLQAFNLQTGPST-------------PS--AHIADKKPFQN 642
+L +HE RL+ HSS T+ + + ++ + PS PS H A +
Sbjct: 207 ILLTHEQRLHLQHSSPTDPSFASAHMASXPSRQPNRPHQPRHYHHPSRPQHQASSSSNRP 266
Query: 641 HSXXXXXXXXXXXXXXXXXXXXXXXGARIICQICGKNNHIASKCFKRFDQTYSGLDSLHT 462
+ R CQ+CGK H A KC+ RFD Y G
Sbjct: 267 PTRFHPQQPRNNHPIPSAHNKPHHLSTRPQCQLCGKFGHTAIKCYHRFDINYQG------ 320
Query: 461 SPGFSPQP*ANYTTSAVPNPMPLIQDXXXXXXXXXXXXADNTAGLNASSSTGDWFMDSGS 282
N +PL Q + A WF D+G+
Sbjct: 321 -----------------NNGVPLAQ-----------APFSHAMXAAAPDHQDSWFFDTGA 352
Query: 281 THHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKILTLKHVLFVPD 102
THH++ + L+ PY G Q+ +G+G+S I G+ F PSK +L VL VP
Sbjct: 353 THHLSHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSF--FFPSKTFSLNQVLHVPH 410
Query: 101 VTMKTI 84
++ I
Sbjct: 411 LSTNLI 416
Score = 37.4 bits (85), Expect(2) = 1e-38
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -2
Query: 90 DNHVFIEFHESYCLVKDQQTHQVLLRGLLK 1
DN VF EFH S VKDQ T ++LL+G L+
Sbjct: 424 DNAVFFEFHSSCFFVKDQVTKKILLKGWLR 453
Score = 151 bits (381), Expect = 3e-33
Identities = 70/126 (55%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Frame = -3
Query: 3791 ERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDY 3612
ERK +H+VETGL L+AQ+ LP K+W AF A +LIN LP+ LHFQSP Q LF+K P+Y
Sbjct: 640 ERKIRHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNY 699
Query: 3611 TFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPS-GRLYIAKTVAFN 3435
L++FGC CFP LRPY KL +R++ C+FL Y+P HKGY CL S R+YI++ V F+
Sbjct: 700 HHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFH 759
Query: 3434 ETEFPY 3417
E+ FP+
Sbjct: 760 ESSFPF 765
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 444 bits (1143), Expect = e-130
Identities = 223/433 (51%), Positives = 298/433 (68%)
Frame = -2
Query: 3150 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 2971
P T QA SW AM+ EY AL++N+TW LVP ++V +WI+++K++ DGS+DR
Sbjct: 859 PRTYSQASKNDSWVQAMNSEYQALLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDR 918
Query: 2970 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 2791
KARLVA+GF Q GID+FDTF+P+VKP TIR++ LAVS W V Q+DV NAFL GDL+
Sbjct: 919 HKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVENAFLNGDLE 978
Query: 2790 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLF 2611
E V+M QP+G+V+PT PT+VCKL ++LYGLKQAP+ W+ KLR LF
Sbjct: 979 EEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTSLF 1038
Query: 2610 FKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKVAD 2431
++ +L++LVYVDDIL+T + +VSH I+ L KF+L+ LG ++YFLG++A ++
Sbjct: 1039 IFHTATDILILLVYVDDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFLGIQAQQLGS 1098
Query: 2430 GILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDGPLFDNPSVYRCIIGALQYLT 2251
+ L Q KYI+DLL + ME PAPTP S DG +PS YR +GALQY+T
Sbjct: 1099 VLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGMSLSDPSEYRRTVGALQYVT 1158
Query: 2250 LTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECFTDA 2071
LTRPDI++ VNK QF+ PS +HW A KR+LR+L+GT HLGL F+P M L+ ++DA
Sbjct: 1159 LTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYLKGTIHLGLHFQP-AASMELQGYSDA 1217
Query: 2070 DWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITSLF 1891
DWAS DRRSTSGYCV+LG NLI+W S KQ +V++SS ESEYR L T++LVWI SL
Sbjct: 1218 DWASCPDDRRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLL 1277
Query: 1890 QNLVYLSNNPVFY 1852
Q L ++ P+ +
Sbjct: 1278 QELCLPTSPPILW 1290
Score = 153 bits (387), Expect(2) = 9e-38
Identities = 120/437 (27%), Positives = 185/437 (42%), Gaps = 27/437 (6%)
Frame = -3
Query: 1313 VRLDRSNFSFWRTQVLATVRAHGFEDFLLGTTPPPAIFQDSSTSGNRVPNPEYTIWMRKD 1134
++LDRSN+ W+TQ+ V A+GFED++ GT P +G+ NP++ W R D
Sbjct: 32 IKLDRSNYILWKTQMENVVYANGFEDYIEGTKSCPP---KELPTGDL--NPDFVQWRRFD 86
Query: 1133 QFLFSWLLSSISESMIGYISRCTTAADIWKKFDDLFRTQSKTXXXXXXXXXXXXXKGDLS 954
+ + SW+ S+++ ++G I T+ + W +F SK KG +
Sbjct: 87 RMVLSWMYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKKGGDA 146
Query: 953 VEDYILQMTGIANQMRTAGQXXXXXXXXXXXLNGLTPEFESVVVVLTSRIGNLSISEMQF 774
+ DYIL+M I++ + G+ L GL P++ S+V LT+R +LS+ +
Sbjct: 147 MLDYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDYNSIVASLTAREDDLSLHSVHS 206
Query: 773 VLQSHELRLNQHHSSVTNTLQAFNLQTGPSTPSAHIA---DKKPFQNH------------ 639
+L +HE RL+ HSS T+ PS SAH+A ++P + H
Sbjct: 207 ILLTHEQRLHLQHSSPTD----------PSFASAHMASVPSRQPNRPHQPRHYHHPSRPQ 256
Query: 638 -----------SXXXXXXXXXXXXXXXXXXXXXXXGARIICQICGKNNHIASKCFKRFDQ 492
+ R CQ+CGK H A KC+ RFD
Sbjct: 257 HQASSSSNRPPTRFHPQQPRNNHPIPSAHNKPHHLSTRPQCQLCGKFGHTAIKCYHRFDI 316
Query: 491 TYSGLDSLHTSPGFSPQP*ANYTTSAVPNPMPLIQDXXXXXXXXXXXXADNTAGLNASSS 312
Y G N +PL Q + A L A+
Sbjct: 317 NYQG-----------------------NNGVPLAQAPF------------SHAMLAAAPD 341
Query: 311 TGD-WFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKI 135
D WF D+G+THH++ + L+ PY G Q+ +G+G+S I G+ F PSK
Sbjct: 342 HQDSWFFDTGATHHLSHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSF--FFPSKT 399
Query: 134 LTLKHVLFVPDVTMKTI 84
+L VL VP ++ I
Sbjct: 400 FSLNQVLHVPHLSTNLI 416
Score = 35.0 bits (79), Expect(2) = 9e-38
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2
Query: 99 YYEDNHVFIEFHESYCLVKDQQTHQVLLRGLLK 1
+ DN VF E H S VKDQ T ++LL+G L+
Sbjct: 421 FXTDNAVFFEXHSSCFFVKDQVTKKILLKGWLR 453
Score = 151 bits (381), Expect = 3e-33
Identities = 70/126 (55%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Frame = -3
Query: 3791 ERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDY 3612
ERK +H+VETGL L+AQ+ LP K+W AF A +LIN LP+ LHFQSP Q LF+K P+Y
Sbjct: 640 ERKIRHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNY 699
Query: 3611 TFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPS-GRLYIAKTVAFN 3435
L++FGC CFP LRPY KL +R++ C+FL Y+P HKGY CL S R+YI++ V F+
Sbjct: 700 HHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFH 759
Query: 3434 ETEFPY 3417
E+ FP+
Sbjct: 760 ESSFPF 765
Score = 94.7 bits (234), Expect = 6e-16
Identities = 47/94 (50%), Positives = 65/94 (69%)
Frame = -1
Query: 1897 LISKLGLSVKQPCVLWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVP 1718
L+ +L L P +LWCDN A LA+NP FH+R+KHIE+D+HFIREKV +++++ YVP
Sbjct: 1276 LLQELCLPTSPP-ILWCDNQSAAHLAANPVFHSRSKHIELDLHFIREKVLRQELQICYVP 1334
Query: 1717 SEDQTADILTKSLSILRFQRLSNQLCLQLFPGSV 1616
S DQ ADI TK L I +F L ++L + P S+
Sbjct: 1335 SGDQLADIFTKHLPITQFCNLRSKLTVTYPPLSL 1368
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 441 bits (1133), Expect = e-130
Identities = 223/452 (49%), Positives = 302/452 (66%), Gaps = 19/452 (4%)
Frame = -2
Query: 3150 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 2971
P +AL +WK+AMD EY ALMKN TW LVP + NV+ KW++++K K DGS+DR
Sbjct: 805 PYDLNEALGDVNWKDAMDIEYSALMKNKTWHLVPPKKGRNVIGCKWVYKIKRKADGSLDR 864
Query: 2970 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 2791
KARLVA+G++Q GID+ DTF+P+VK TIRI+ ++AVSRGW + Q+DV NAFL G L+
Sbjct: 865 YKARLVAKGYKQQYGIDYDDTFSPVVKHATIRIILSIAVSRGWSLCQLDVQNAFLHGVLE 924
Query: 2790 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLF 2611
E VYM QP GY D TK +VCKL ++LYGLKQAP+ WY +L LF
Sbjct: 925 EEVYMQQPPGYEDSTKLNYVCKLDKALYGLKQAPRAWYSRLSNKLLSLGFQASKADTSLF 984
Query: 2610 FKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKVAD 2431
F N G + VLVYVDDI++ L++ L+ +F+LK LG++NYFLG+E +KV D
Sbjct: 985 FYNKGSVTIFVLVYVDDIIVASSTHKATEALLSDLNKEFALKDLGDLNYFLGIEVNKVRD 1044
Query: 2430 GILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDG-PLFDNP-SVYRCIIGALQY 2257
GI+LTQ KY SDLL K M +C P TP + K S+H+G PL + + YR I+GALQY
Sbjct: 1045 GIILTQDKYASDLLKKVGMSDCKPISTPLSTSEKLSIHEGSPLGEKDITQYRSIVGALQY 1104
Query: 2256 LTLTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECFT 2077
LTLTRPDI++ VNK+ QFLH+P+ LHW A KR+LR+++ +LGL + ++ F+
Sbjct: 1105 LTLTRPDIAFSVNKVCQFLHAPTTLHWAAVKRILRYIKQCTNLGLHIH-RSDSTLVSAFS 1163
Query: 2076 DADWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITS 1897
DADWA S+ DR+ST G+ V+LG NL++W ++KQP V+RSSTESEY++LA AT++L+W+
Sbjct: 1164 DADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTESEYKALANATAELIWVQI 1223
Query: 1896 LFQNL-----------------VYLSNNPVFY 1852
L + YLS NP+F+
Sbjct: 1224 LLTEISIKSPRAAKLWCDNLGAKYLSANPIFH 1255
Score = 163 bits (412), Expect = 5e-37
Identities = 74/129 (57%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Frame = -3
Query: 3791 ERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDY 3612
ERKH+HIVE GL+LLA AS+P KFW +AFL A +LINR P+ L+ +P+++LF+K PDY
Sbjct: 464 ERKHRHIVEVGLSLLAHASMPLKFWDEAFLAAAYLINRTPTKILNLDTPFERLFHKQPDY 523
Query: 3611 TFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPS-GRLYIAKTVAFN 3435
+ L+IFGC C+P LRPYN+ KLQFR+ +C+FL YS HKG+KCL S GR+Y+++ V F+
Sbjct: 524 SVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVTFD 583
Query: 3434 ETEFPYPLL 3408
E FP+ L
Sbjct: 584 ENFFPFASL 592
Score = 98.2 bits (243), Expect = 5e-17
Identities = 84/374 (22%), Positives = 140/374 (37%), Gaps = 9/374 (2%)
Frame = -3
Query: 1280 RTQVLATVRAHGFEDFLLGTTPPPAIFQDSSTSGNRVPNPEYTIWMRKDQFLFSWLLSSI 1101
+ QV A +R E +L G T P + G + PNP + W KDQ + S+LLSSI
Sbjct: 5 KAQVRAAMRGARLEGYLTGATKMPDE-ETVDNKGKKSPNPAFEEWEAKDQQILSYLLSSI 63
Query: 1100 SESMIGYISRCTTAADIWKKFDDLFRTQSKTXXXXXXXXXXXXXKGDLSVEDYILQMTGI 921
S + ++ TAA+ W + +F +Q++ KG ++V +Y +M G
Sbjct: 64 SREVQIQVTSAKTAAEAWHSIEAMFASQTRARAVNLRLALSTTKKGSMTVAEYYTKMKGY 123
Query: 920 ANQMRTAGQXXXXXXXXXXXLNGLTPEFESVVVVLTSRIGNLSISEMQFVLQSHELRLN- 744
++M AG+ L GL EF +V L +R+ +S+ ++ L + E +L+
Sbjct: 124 GDEMAAAGRPLQDEEMVEYILTGLEEEFLPMVSALVTRVDPISLEDLYSQLLNFETKLDL 183
Query: 743 ------QHHSSVTNTLQAFNLQTGPSTPSAHIADKKPFQNHSXXXXXXXXXXXXXXXXXX 582
QH S + + +
Sbjct: 184 MRGGGEQHQGSANMAGRGGRGNQRGGSGGRGQRGGRGSSRGGRASWSGGRQSNQGGYIRR 243
Query: 581 XXXXXGARIICQICGKNNHIASKCFKRFDQTYSGLDSLHTSPGFSPQP*ANYTTSAVPNP 402
R +CQ+C K H A++C+ RF++ + VP+
Sbjct: 244 SNNSSDERPVCQVCFKKGHTAARCWHRFEEDF------------------------VPD- 278
Query: 401 MPLIQDXXXXXXXXXXXXADNTAGLNASSSTGD--WFMDSGSTHHVTSNLGNLTLHSPYQ 228
+ AG +S D W+ D+G+T H+T L L++ Y
Sbjct: 279 -------------------EKLAGAATNSYHVDTNWYTDTGATDHITGELEKLSIREKYA 319
Query: 227 GKAQLVVGNGSSAS 186
G Q+ +GS S
Sbjct: 320 GGDQIHTASGSDNS 333
Score = 88.6 bits (218), Expect = 5e-14
Identities = 37/75 (49%), Positives = 55/75 (73%)
Frame = -1
Query: 1897 LISKLGLSVKQPCVLWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVP 1718
L++++ + + LWCDN GA L++NP FHARTKHIE+D HF+R++V+ K +++ YVP
Sbjct: 1224 LLTEISIKSPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDYHFVRDRVAKKLLDIEYVP 1283
Query: 1717 SEDQTADILTKSLSI 1673
+ DQ AD TK LS+
Sbjct: 1284 TGDQVADGFTKPLSV 1298
>gb|KYP34165.1| Copia protein [Cajanus cajan]
Length = 542
Score = 417 bits (1071), Expect = e-129
Identities = 205/430 (47%), Positives = 284/430 (66%), Gaps = 1/430 (0%)
Frame = -2
Query: 3150 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 2971
PT QAL WK AM EY AL+KN TWDLV +T KWIF+ K+ DGS+ R
Sbjct: 21 PTNVAQALEHKQWKQAMQAEYDALLKNCTWDLVSLPPDRKAITCKWIFKNKYSQDGSILR 80
Query: 2970 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 2791
KARLVARGF Q G+D+ DTF+P+V+P++IR++ +AVS+GW +HQ+DV+NAFL GDLK
Sbjct: 81 HKARLVARGFNQQPGLDYTDTFSPVVRPVSIRVVLAIAVSKGWPIHQIDVDNAFLNGDLK 140
Query: 2790 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLF 2611
E +YM QP+G+ P VCKL +++YGLKQAP+ W+ KL LF
Sbjct: 141 EEIYMLQPQGF-HQGSPNTVCKLRKAIYGLKQAPRAWFQKLTLTLFRLGFIQAKSDNSLF 199
Query: 2610 FKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHK-VA 2434
S + +LVYVDD++IT + + LI L F LK LG +++FLG+E H A
Sbjct: 200 ISTSRTTSIYILVYVDDVIITSNSATAIRGLIQALHQYFPLKDLGRLHHFLGIEVHSDNA 259
Query: 2433 DGILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDGPLFDNPSVYRCIIGALQYL 2254
G+ L+QT+Y++D+L + +M N P TP P SK + +PS YR I+GALQYL
Sbjct: 260 GGVHLSQTRYVTDILDRLNMSNARPVKTPMAPASKLTNDGTEACQDPSQYRSIVGALQYL 319
Query: 2253 TLTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECFTD 2074
T+TRPDI+Y VNKL QF+H+P +HWKA KR+LR+L+GT H GL ++ T D + + D
Sbjct: 320 TITRPDIAYTVNKLCQFMHNPLDVHWKATKRLLRYLKGTLHHGLHYKKFT-DTEIYAYCD 378
Query: 2073 ADWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITSL 1894
+DWAS D RSTSG CVYLG N+++W++KKQ VV+RSSTE+E+RS+A +++ ++ +L
Sbjct: 379 SDWASDQEDLRSTSGNCVYLGSNIVSWMAKKQKVVSRSSTEAEFRSMASLVAEIQYVQNL 438
Query: 1893 FQNLVYLSNN 1864
L +++ N
Sbjct: 439 LSELGHINKN 448
Score = 82.0 bits (201), Expect = 2e-12
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = -1
Query: 1897 LISKLGLSVKQPCVLWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVP 1718
L+S+LG K ++WCDN GA+ L+ NP H RTKH E+D+ FIRE+V+ +I V+++P
Sbjct: 438 LLSELGHINKNQPLIWCDNQGAVLLSLNPVLHTRTKHFELDLWFIRERVAQGKIVVKHIP 497
Query: 1717 SEDQTADILTKSLSILRFQRLSNQL 1643
+ Q AD+LTK+ S F L ++L
Sbjct: 498 ARLQVADLLTKAPSTAIFLDLRDKL 522
>dbj|BAH94406.1| Os08g0544300 [Oryza sativa Japonica Group]
Length = 821
Score = 423 bits (1087), Expect = e-128
Identities = 213/452 (47%), Positives = 296/452 (65%), Gaps = 19/452 (4%)
Frame = -2
Query: 3150 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 2971
P + ++A++ WK AMD EY AL++N TW LVP + NV+ KW+++VK K DGS+DR
Sbjct: 307 PQSLEEAVNNKHWKEAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDR 366
Query: 2970 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 2791
KARLVA+GF+Q GID+ DTF+P+VK TIRI+ +LAVSRGW + Q+DV NAFL G L+
Sbjct: 367 YKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLE 426
Query: 2790 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLF 2611
E VYM QP GY + P +VCKL ++LYGLKQAP+ WY +L LF
Sbjct: 427 EEVYMEQPPGYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLF 486
Query: 2610 FKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKVAD 2431
F G + +L+YVDDI++ S L+ L F+LK LG+++YFLG+E HKV D
Sbjct: 487 FYKKGQVSIFLLIYVDDIIMASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKD 546
Query: 2430 GILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDGPLF--DNPSVYRCIIGALQY 2257
G++L+Q KY SDLL + M C P TP + K S+++G L + + YR ++GALQY
Sbjct: 547 GLMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQY 606
Query: 2256 LTLTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECFT 2077
LTLTRPDIS+ +NK+ QFLH+P+ HW A KR+LR+++ T GL F +++ F+
Sbjct: 607 LTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKF-CRNPSLLVSGFS 665
Query: 2076 DADWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITS 1897
DADWA S DRRST G+ V+LG NL++W ++KQ V+RSSTE+EY++LA AT++++W+ +
Sbjct: 666 DADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWVQT 725
Query: 1896 LFQNL-----------------VYLSNNPVFY 1852
L Q L YLS NP+F+
Sbjct: 726 LLQELGVESPRAAKLWCDNLGAKYLSANPIFH 757
Score = 124 bits (311), Expect = 3e-25
Identities = 56/107 (52%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Frame = -3
Query: 3734 LPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNT 3555
+P KFW +A L A +LINR PS ++F P +QLF + P+YT L+IFGCA +P LRPYN
Sbjct: 1 MPIKFWDEAVLAAAYLINRTPSKVINFACPLEQLFKEKPNYTALRIFGCAVWPNLRPYNK 60
Query: 3554 SKLQFRTSKCLFL*YSPTHKGYKCLH-PSGRLYIAKTVAFNETEFPY 3417
KL FR+ +C+FL YS HKG+KCL +GR+Y+++ V F+E+ FP+
Sbjct: 61 HKLAFRSKRCVFLGYSNLHKGFKCLEIATGRVYVSRDVTFDESIFPF 107
Score = 93.6 bits (231), Expect = 1e-15
Identities = 40/88 (45%), Positives = 61/88 (69%)
Frame = -1
Query: 1897 LISKLGLSVKQPCVLWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVP 1718
L+ +LG+ + LWCDN GA L++NP FHARTKHIE+D HF+RE+V+ K +E+ Y+
Sbjct: 726 LLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYIS 785
Query: 1717 SEDQTADILTKSLSILRFQRLSNQLCLQ 1634
++DQ AD TK++ + + + N L L+
Sbjct: 786 TKDQVADGFTKAIPVRQMEMFKNNLNLE 813
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 438 bits (1126), Expect = e-128
Identities = 220/452 (48%), Positives = 300/452 (66%), Gaps = 19/452 (4%)
Frame = -2
Query: 3150 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 2971
PT +AL +WK AMD EY AL+KN TW LVP N++ KW++++K K DG++DR
Sbjct: 945 PTNDLEALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDR 1004
Query: 2970 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 2791
KARLVA+GF+Q GID+ DTF+P+VK TIRI+ +LAVS+GW + Q+DV NAFL G L+
Sbjct: 1005 YKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLE 1064
Query: 2790 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLF 2611
E VYM QP G+ DPTKP HVCKL ++LYGLKQAP+ W+ +L LF
Sbjct: 1065 EEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLF 1124
Query: 2610 FKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKVAD 2431
F N G + VLVYVDDI++ + L+ L +F+LK LGE++YFLG+E KV +
Sbjct: 1125 FLNKGDITMFVLVYVDDIIVASSSEKATAALLQDLKGEFALKDLGELHYFLGIEVSKVQN 1184
Query: 2430 GILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDGPLF--DNPSVYRCIIGALQY 2257
GI+L Q KY +DLL K M +C PA TP + K SLH+G L ++ S YR ++GALQY
Sbjct: 1185 GIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQY 1244
Query: 2256 LTLTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECFT 2077
LTLTRPDI++ VNK+ QFLH+P+ +HW A KR+LR+L+ LGL +G ++ F+
Sbjct: 1245 LTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHK-SGSTLVSGFS 1303
Query: 2076 DADWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITS 1897
DADWA + DRRST G+ ++LG NL++W ++KQ V+RSSTESEY+++A AT++++W+ +
Sbjct: 1304 DADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQT 1363
Query: 1896 LFQNL-----------------VYLSNNPVFY 1852
L L YLS NPVF+
Sbjct: 1364 LLAELEIKSPKAAKIWCDNLGAKYLSANPVFH 1395
Score = 162 bits (410), Expect = 1e-36
Identities = 74/126 (58%), Positives = 99/126 (78%), Gaps = 1/126 (0%)
Frame = -3
Query: 3791 ERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDY 3612
ERKH+HIVE GL+LL+ AS+P KFW +AF +AT+LINR+PS +H SP ++LF + PDY
Sbjct: 611 ERKHRHIVEIGLSLLSHASMPLKFWDEAFQVATYLINRVPSRVIHNISPLEKLFKQKPDY 670
Query: 3611 TFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPS-GRLYIAKTVAFN 3435
+ L+IFGCAC+P LRPYN KLQFR+ +C+FL +S HKG+KCL S GR+YI++ V F+
Sbjct: 671 SSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRDVVFD 730
Query: 3434 ETEFPY 3417
E FP+
Sbjct: 731 ENIFPF 736
Score = 117 bits (294), Expect(2) = 2e-26
Identities = 92/407 (22%), Positives = 168/407 (41%), Gaps = 5/407 (1%)
Frame = -3
Query: 1310 RLDRSNFSFWRTQVLATVRAHGFEDFLLGTT--PPPAIFQDSSTSGNRVPNPEYTIWMRK 1137
+L ++N + W+ QV A VR + L G T PP I + + PNP + W
Sbjct: 21 KLGKANHALWKVQVSAAVRGARLQGHLTGATKRPPAEIAVTKDGATKKEPNPAHEDWEAT 80
Query: 1136 DQFLFSWLLSSISESMIGYISRCTTAADIWKKFDDLFRTQSKTXXXXXXXXXXXXXKGDL 957
DQ + +LLSS++ ++ ++ C TAA++W + ++ T ++ KG++
Sbjct: 81 DQQVLGYLLSSLTREVLMQVATCDTAAEVWSAIEQMYSTHTRARAINTRFALTNTKKGNM 140
Query: 956 SVEDYILQMTGIANQMRTA-GQXXXXXXXXXXXLNGLTPEFESVVVVLTSRIGNLSISEM 780
S +Y +M + ++M TA G+ + GL + VV + +R+ +S+S++
Sbjct: 141 STPEYFAKMKSLGDEMATAGGRPIDEEELIQYIITGLGEGYSEVVSAVCARVEPISVSDL 200
Query: 779 QFVLQSHELRLNQHHSSVTNTLQAFNLQTGPSTPSAHIAD--KKPFQNHSXXXXXXXXXX 606
+ + E R + + T+ N + G S ++ + +
Sbjct: 201 YSQVLNFEARQAIYRGAQEVTVNVAN-RGGFSHGGRGNSNGGQGGSRGGGGGGGHGRGNG 259
Query: 605 XXXXXXXXXXXXXGARIICQICGKNNHIASKCFKRFDQTYSGLDSLHTSPGFSPQP*ANY 426
R ICQ+C K H A+ C+ R+D+ Y D+ H +
Sbjct: 260 GGGHGRGRTPGGVDKRPICQVCFKRGHTAADCWYRYDEDYVP-DAKHVA----------- 307
Query: 425 TTSAVPNPMPLIQDXXXXXXXXXXXXADNTAGLNASSSTGDWFMDSGSTHHVTSNLGNLT 246
A +N+ +W++D+G+T HVT L LT
Sbjct: 308 -----------------------------AAAVNSYGVDTNWYIDTGATDHVTGELDKLT 338
Query: 245 LHSPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKILTLKHVLFVP 105
+ Y G Q+ +G+ IS +G + N S+ + L++VL+VP
Sbjct: 339 MKEKYNGGEQIHTASGAGMDISHIGHAIVHNPN-SRNIHLRNVLYVP 384
Score = 32.7 bits (73), Expect(2) = 2e-26
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 90 DNHVFIEFHESYCLVKDQQTHQVLLRG 10
DN F+E H Y +KDQ T + LL+G
Sbjct: 399 DNSAFLELHRDYFFLKDQITRKTLLKG 425
Score = 88.6 bits (218), Expect = 5e-14
Identities = 40/87 (45%), Positives = 58/87 (66%)
Frame = -1
Query: 1897 LISKLGLSVKQPCVLWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVP 1718
L+++L + + +WCDN GA L++NP FHARTKHIE+D HF+RE+VS K +E+ +V
Sbjct: 1364 LLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVS 1423
Query: 1717 SEDQTADILTKSLSILRFQRLSNQLCL 1637
+ DQ AD TK LS+ + + L L
Sbjct: 1424 TNDQVADGFTKPLSVRLLENFKSNLNL 1450
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 426 bits (1094), Expect = e-128
Identities = 208/452 (46%), Positives = 298/452 (65%), Gaps = 19/452 (4%)
Frame = -2
Query: 3150 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 2971
P ++A++ +W+ AM++EY A M N TW LVP ++ N++ KW++++K K DGS+DR
Sbjct: 426 PENLREAMANSNWRLAMEQEYSAFMSNKTWHLVPPTQGKNIIDCKWMYKIKRKADGSIDR 485
Query: 2970 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 2791
KARLVA+GF+Q GID+ DTF+ +VK TIR++ ++AVS+GW + Q+DV NAFL G L+
Sbjct: 486 YKARLVAKGFKQRYGIDYEDTFSLVVKAATIRLILSIAVSKGWSLRQLDVQNAFLHGYLE 545
Query: 2790 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLF 2611
E VYM QP G+ + +P ++CKL ++LYGLKQAP+ WY +L LF
Sbjct: 546 EEVYMRQPPGFENKGQPNYLCKLDKALYGLKQAPRAWYSRLSTKLQELGFISSKADTSLF 605
Query: 2610 FKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKVAD 2431
F N GG + +LVYVDDI++ VV+ L+ L+ F+LK LG+++YFLG+E KV+
Sbjct: 606 FYNKGGCTIFILVYVDDIIVASSSAEVVAALLKDLEKDFALKDLGDLHYFLGIEVKKVSQ 665
Query: 2430 GILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDGPLF--DNPSVYRCIIGALQY 2257
G++L+Q Y SD+L +A M C PA TP K S+ DG ++ S YR I+GALQY
Sbjct: 666 GLVLSQAWYASDILKRAGMSICKPASTPLSTTEKLSIEDGDFLGQNDASHYRSIVGALQY 725
Query: 2256 LTLTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECFT 2077
LTLTR D+S++VNK+ QFLHSP+ +HW A KR+LR+++GT GL F + M++ F+
Sbjct: 726 LTLTRSDLSFLVNKVCQFLHSPTTVHWSAVKRILRYIKGTVEFGLRFGK-SDSMLISAFS 784
Query: 2076 DADWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITS 1897
DADWA DRRST G+ V+LG NLI+W ++KQ V+RSSTE+EY++LA AT+++ W+
Sbjct: 785 DADWAGCSDDRRSTGGFAVFLGPNLISWSARKQATVSRSSTEAEYKALANATTEVTWVRK 844
Query: 1896 LFQNL-----------------VYLSNNPVFY 1852
+ L YLS NPVF+
Sbjct: 845 ILDELRIARPSVAQLWCDNLGATYLSANPVFH 876
Score = 84.0 bits (206), Expect = 1e-12
Identities = 38/69 (55%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
Frame = -1
Query: 1879 LSVKQPCV--LWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVPSEDQ 1706
L + +P V LWCDN GA L++NP FHARTKHIEID HF+RE+V+ K ++++++ + DQ
Sbjct: 849 LRIARPSVAQLWCDNLGATYLSANPVFHARTKHIEIDYHFVREQVAKKLLDIQFISTTDQ 908
Query: 1705 TADILTKSL 1679
AD TKSL
Sbjct: 909 LADGFTKSL 917
>gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1429
Score = 404 bits (1039), Expect(2) = e-127
Identities = 215/478 (44%), Positives = 289/478 (60%), Gaps = 6/478 (1%)
Frame = -2
Query: 3267 SITFTSYHSLAHSSYGH---PL*KWYFKT*SPYCSFSPIPIAPTTAQQALSIPSWKNAMD 3097
S T ++H L S GH PL + + + PTT QQALS W AM
Sbjct: 884 SPTTNTHHMLTRSKTGHLKPPL----------FPTINLTTTEPTTVQQALSSIHWTEAMQ 933
Query: 3096 EEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDRLKARLVARGFQQNAGIDF 2917
+EY AL N TW LVP H + KWIFR+K DG++++ KARLVA+GF Q G D+
Sbjct: 934 QEYQALQANKTWSLVPLPPHKRAIGCKWIFRIKENPDGTINKYKARLVAKGFNQKYGQDY 993
Query: 2916 FDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLKESVYMAQPEGYVDPTKPT 2737
DT++P+VKP+T+R + T+A++ W + Q+DVNNAFL G L E VYM QP+G++ + T
Sbjct: 994 SDTYSPVVKPITVRTVLTIALTSKWPLIQLDVNNAFLNGQLHEDVYMQQPQGFIQ-GEST 1052
Query: 2736 HVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLFFKNSGGALLMVLVYVDDI 2557
VCKL +++YGLKQAP+ WY+ L L N G L++L+YVDDI
Sbjct: 1053 LVCKLHKAIYGLKQAPRAWYESLTNTLISFGFQQSKCDPSLLIFNKHGCCLLILIYVDDI 1112
Query: 2556 LITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKVADGIL-LTQTKYISDLLVKA 2380
+IT ++ ++ L+ FSLK LG + YFLG+E G L L+Q KYI D+L +A
Sbjct: 1113 IITGSSNTAINLIVNKLNATFSLKQLGTLEYFLGIECKLTPSGALHLSQAKYIRDILHRA 1172
Query: 2379 SMENCSPAPTPCCPNSKFSLHDGPLFDNPSVYRCIIGALQYLTLTRPDISYIVNKLSQFL 2200
ME+C TP N K S FDNP++YR I+GALQY T+TRP++ Y V+K+ QF
Sbjct: 1173 GMEDCKGISTPLPANLKLSKTGADPFDNPTLYRSIVGALQYATITRPELGYSVSKVCQFF 1232
Query: 2199 HSPSVLHWKACKRVLRFLQGTKHLGLLFRPLT--GDMILECFTDADWASSIHDRRSTSGY 2026
P V HW A KR+LR+L+G+ GL P T + + F DADWAS I DRRSTSG
Sbjct: 1233 AQPLVSHWSAVKRILRYLKGSIDHGLTLLPATTSAPLSINAFCDADWASDIDDRRSTSGA 1292
Query: 2025 CVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITSLFQNLVYLSNNPVFY 1852
C++ G NL++W SKKQ +VA+SS E+EYRSLA A S+++W+ SL L PV Y
Sbjct: 1293 CIFFGPNLVSWWSKKQTLVAKSSAEAEYRSLAHAASEVLWLQSLLHELKVPIPPPVIY 1350
Score = 83.6 bits (205), Expect(2) = e-127
Identities = 37/74 (50%), Positives = 53/74 (71%)
Frame = -1
Query: 1864 PCVLWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVPSEDQTADILTK 1685
P V++CDN A+ ++ NP H+RTKH+E+D+ F+REKV NK + V Y+P++ Q ADILTK
Sbjct: 1346 PPVIYCDNQSAVAISHNPVLHSRTKHMELDIFFVREKVLNKSLVVSYIPAQLQVADILTK 1405
Query: 1684 SLSILRFQRLSNQL 1643
SLS F ++L
Sbjct: 1406 SLSKHLFYNFRSKL 1419
Score = 145 bits (365), Expect = 2e-31
Identities = 71/128 (55%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
Frame = -3
Query: 3791 ERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDY 3612
ERKH+HIVE GL+LL+ +SLP +W AF A ++INRLP+S H P + LFN PDY
Sbjct: 673 ERKHRHIVEMGLSLLSHSSLPYHYWDHAFHTAVYIINRLPASHNHC-IPLKVLFNNVPDY 731
Query: 3611 TFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCL-HPSGRLYIAKTVAFN 3435
FL+ FGCAC+P L PYN K Q+R+ +C+FL YS +GYKCL + SGR+YI+K V FN
Sbjct: 732 NFLRAFGCACYPLLTPYNNPKFQYRSKECIFLGYST--RGYKCLDNKSGRIYISKDVLFN 789
Query: 3434 ETEFPYPL 3411
E FPY +
Sbjct: 790 EKHFPYQI 797
Score = 114 bits (284), Expect = 8e-22
Identities = 100/446 (22%), Positives = 173/446 (38%), Gaps = 35/446 (7%)
Frame = -3
Query: 1316 TVRLDRSNFSFWRTQVLATVRAHGFEDFLLGTTPPPAIFQDSSTSGNRVPNPEYTIWMRK 1137
+V+LD +N+ W Q+ +RAH F + PP + N + NP ++ W +
Sbjct: 7 SVKLDATNYLVWLQQIEPVLRAHRLHRFCVTPEIPPQYASEHDRLAN-IENPAFSNWELQ 65
Query: 1136 DQFLFSWLLSSISESMIGYISRCTTAADIWKKFDDLFRTQSKTXXXXXXXXXXXXXKGDL 957
DQ L +WL SS+S +++ + C +W+ F++++K KG
Sbjct: 66 DQLLLAWLQSSLSPAILPSVIGCKHTFQLWENIHQSFQSKTKAQARQLRTQLRTTKKGSS 125
Query: 956 SVEDYILQMTGIANQMRTAGQXXXXXXXXXXXLNGLTPEFESVVVVLTSRIGNLSISEMQ 777
S+ +++ ++ I++ + + G+ L GL EFES+V ++ S+I + E++
Sbjct: 126 SISEFLAKIKHISDSLTSIGESVSLQDQLDVILEGLPNEFESLVTLINSKIEWFDLEEIR 185
Query: 776 FVLQSHELRL---------------------------NQHHSSVTNTLQAFNLQTGPSTP 678
+L +HE RL N + ++ T N TG S
Sbjct: 186 ALLLAHEQRLDKARITEEAASLNFTQSQPNSKTPNSVNPNSATETQIAPQANWTTGNSNS 245
Query: 677 SAHIADKKPFQNHSXXXXXXXXXXXXXXXXXXXXXXXGARIICQICGKNNHIASKCFKRF 498
+ + F+N++ + + CQ+C + H AS C+ RF
Sbjct: 246 GNYDSQNNNFKNNN----QSRGRGGRNGRGNRGGRGGRSTVQCQVCHRTGHDASYCYHRF 301
Query: 497 DQTY-SGLDSLHTSPGFSPQP*ANYTTSAVPN------PMPLIQDXXXXXXXXXXXXADN 339
+ Y S +H +P Y + PN P Q N
Sbjct: 302 NAAYGSNQPYVHGNP-------YQYVRNTTPNNNNWAQSNPQWQQAAPQANFTGYAPQTN 354
Query: 338 TAGLNASSSTGDWFMDSGSTHHVTSNLGNLTLHSPYQGKAQLVVGNGSSASISKVGSTQF 159
G A T + +D+ +T HVT P + +GNG ++ + S F
Sbjct: 355 FTGY-AMHPTMNNNLDTAATQHVTLMQPPPGSAPPPSHLEHIFLGNGQGLRVTGISSYAF 413
Query: 158 PS-LNPSKILTLKHVLFVPDVTMKTI 84
PS +P L L +VL VP + I
Sbjct: 414 PSPSHPHHTLHLNNVLHVPSINKNLI 439
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 437 bits (1123), Expect = e-127
Identities = 215/452 (47%), Positives = 306/452 (67%), Gaps = 19/452 (4%)
Frame = -2
Query: 3150 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 2971
P ++AL +W++AM+ EY AL+KN TW LVP+ + N++ KW++++K K DG++DR
Sbjct: 937 PQNDKEALGDKNWRDAMETEYNALIKNDTWHLVPYEKGQNIIGCKWVYKIKRKADGTLDR 996
Query: 2970 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 2791
KARLVA+GF+Q GID+ DTF+P+VK TIRI+ ++AVSRGW + Q+DV NAFL G L+
Sbjct: 997 YKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLE 1056
Query: 2790 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLF 2611
E VYM QP G+ +KP +VCKL ++LYGLKQAP+ WY +L LF
Sbjct: 1057 EEVYMQQPPGFESSSKPDYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLF 1116
Query: 2610 FKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKVAD 2431
F N GG L+ VLVYVDDI++ + L+ L+ +F+LK LG+++YFLG+E KV++
Sbjct: 1117 FLNKGGILMFVLVYVDDIIVASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVSN 1176
Query: 2430 GILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDG-PLFDNPSV-YRCIIGALQY 2257
G++LTQ KY +DLL + +M NC P TP + K +L++G PL N ++ YR I+GALQY
Sbjct: 1177 GVILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDAIQYRSIVGALQY 1236
Query: 2256 LTLTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECFT 2077
LTLTRPDI+Y VNK+ QFLH+P+ HW A KR+LR+L LGL + ++ ++
Sbjct: 1237 LTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLHIHK-SASTLVHGYS 1295
Query: 2076 DADWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITS 1897
DADWA SI DR+ST G+ V+LG NL++W ++KQP V+RSSTE+EY+++A T++L+W+ +
Sbjct: 1296 DADWAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQT 1355
Query: 1896 LFQNL-----------------VYLSNNPVFY 1852
L + L YLS NPVF+
Sbjct: 1356 LLKELGIESPKAAKIWCDNLGAKYLSANPVFH 1387
Score = 165 bits (417), Expect = 2e-37
Identities = 74/129 (57%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Frame = -3
Query: 3791 ERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDY 3612
ERKH+HIVE GL+LL+ AS+P KFW +AF+ AT+LINR+PS + +P ++LFN+ PDY
Sbjct: 617 ERKHRHIVEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFNQKPDY 676
Query: 3611 TFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLH-PSGRLYIAKTVAFN 3435
+ L++FGCAC+P+LRPYNT KLQFR+ +C+FL +S HKG+KCL SGR+YI++ V F+
Sbjct: 677 SSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFD 736
Query: 3434 ETEFPYPLL 3408
E FP+ L
Sbjct: 737 ENVFPFSTL 745
Score = 109 bits (273), Expect(2) = 9e-24
Identities = 88/412 (21%), Positives = 152/412 (36%), Gaps = 3/412 (0%)
Frame = -3
Query: 1310 RLDRSNFSFWRTQVLATVRAHGFEDFLLGTTPPPAIFQDSSTSGNRV--PNPEYTIWMRK 1137
+L ++N + W+ QV A VR +L G P + G PNP + W
Sbjct: 24 KLGKANHALWKAQVSAAVRGARLLGYLNGDIKAPDAELSVTIDGKTTTKPNPAFEDWEAN 83
Query: 1136 DQFLFSWLLSSISESMIGYISRCTTAADIWKKFDDLFRTQSKTXXXXXXXXXXXXXKGDL 957
DQ + +LLSS+S ++ ++ C TAA+ W+ + L+ T ++ KG +
Sbjct: 84 DQLVLGYLLSSLSRDVLIQVATCKTAAEAWRSIEALYSTGTRARAVNTRLALTNTKKGTM 143
Query: 956 SVEDYILQMTGIANQMRTAGQXXXXXXXXXXXLNGLTPEFESVVVVLTSRIGNLSISEMQ 777
+ +Y+ +M + ++M G + GL +F +V L ++ +++ E+
Sbjct: 144 KIAEYVAKMRALGDEMAAGGHPLDEEDLVQYIIAGLNEDFSPIVSNLCNKSDPITVGELY 203
Query: 776 FVLQSHELRLNQHHSS-VTNTLQAFNLQTGPSTPSAHIADKKPFQNHSXXXXXXXXXXXX 600
L + E L+ + S+ N G +
Sbjct: 204 SQLVNFETLLDLYRSTGQGGAAFVANRGRGGGGGGRGNNNNSGGGGGRSAPGGRGSGSQG 263
Query: 599 XXXXXXXXXXXGARIICQICGKNNHIASKCFKRFDQTYSGLDSLHTSPGFSPQP*ANYTT 420
R CQ+C K H A+ C+ RFD+ Y + L
Sbjct: 264 RGGRGRGTGGQDRRPTCQVCFKRGHTAADCWYRFDEDYVADEKL---------------- 307
Query: 419 SAVPNPMPLIQDXXXXXXXXXXXXADNTAGLNASSSTGDWFMDSGSTHHVTSNLGNLTLH 240
A N+ +W++D+G+T H+T L LT
Sbjct: 308 --------------------------VAAATNSYGIDTNWYIDTGATDHITGELEKLTTK 341
Query: 239 SPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKILTLKHVLFVPDVTMKTI 84
Y G Q+ +G+ IS +G T + PS+ + L +VL+VP I
Sbjct: 342 EKYNGGEQIHTASGAGMDISHIGHTIVHT--PSRNIHLNNVLYVPQAKKNLI 391
Score = 32.0 bits (71), Expect(2) = 9e-24
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 90 DNHVFIEFHESYCLVKDQQTHQVLLRG 10
DN F+E H + +KDQ T VLL G
Sbjct: 399 DNSAFLELHSKFFSIKDQVTRDVLLEG 425
Score = 94.4 bits (233), Expect = 8e-16
Identities = 43/87 (49%), Positives = 59/87 (67%)
Frame = -1
Query: 1897 LISKLGLSVKQPCVLWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVP 1718
L+ +LG+ + +WCDN GA L++NP FHARTKHIE+D HF+RE+VS K +E+ +VP
Sbjct: 1356 LLKELGIESPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVP 1415
Query: 1717 SEDQTADILTKSLSILRFQRLSNQLCL 1637
S DQ AD TK+LS + + L L
Sbjct: 1416 SGDQVADGFTKALSACLLENFKHNLNL 1442
>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1621
Score = 438 bits (1127), Expect = e-127
Identities = 220/452 (48%), Positives = 300/452 (66%), Gaps = 19/452 (4%)
Frame = -2
Query: 3150 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 2971
PT +AL +WK AMD EY AL+KN TW LVP N++ KW++++K K DG++DR
Sbjct: 667 PTNDLEALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDR 726
Query: 2970 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 2791
KARLVA+GF+Q GID+ DTF+P+VK TIRI+ +LAVS+GW + Q+DV NAFL G L+
Sbjct: 727 YKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLE 786
Query: 2790 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLF 2611
E VYM QP G+ DPTKP HVCKL ++LYGLKQAP+ W+ +L LF
Sbjct: 787 EEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLF 846
Query: 2610 FKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKVAD 2431
F N G + VLVYVDDI++ + L+ L +F+LK LGE++YFLG+E KV +
Sbjct: 847 FLNKGDITMFVLVYVDDIIVASSSEKATAALLQNLKGEFALKDLGELHYFLGIEVSKVQN 906
Query: 2430 GILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDGPLF--DNPSVYRCIIGALQY 2257
GI+L Q KY +DLL K M +C PA TP + K SLH+G L ++ S YR ++GALQY
Sbjct: 907 GIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQY 966
Query: 2256 LTLTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECFT 2077
LTLTRPDI++ VNK+ QFLH+P+ +HW A KR+LR+L+ LGL +G ++ F+
Sbjct: 967 LTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHK-SGSTLVSGFS 1025
Query: 2076 DADWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITS 1897
DADWA + DRRST G+ ++LG NL++W ++KQ V+RSSTESEY+++A AT++++W+ +
Sbjct: 1026 DADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQT 1085
Query: 1896 LFQNL-----------------VYLSNNPVFY 1852
L L YLS NPVF+
Sbjct: 1086 LLAELEIKSPKAAKIWCDNLGAKYLSANPVFH 1117
Score = 107 bits (268), Expect = 7e-20
Identities = 80/375 (21%), Positives = 146/375 (38%), Gaps = 3/375 (0%)
Frame = -3
Query: 1310 RLDRSNFSFWRTQVLATVRAHGFEDFLLGTT--PPPAIFQDSSTSGNRVPNPEYTIWMRK 1137
+L ++N + W+ QV A VR + L G T PP I + + PNP + W
Sbjct: 107 KLGKANHALWKVQVSAAVRGARLQGHLTGATKRPPAEIAVTKDGATKKEPNPAHEDWEAT 166
Query: 1136 DQFLFSWLLSSISESMIGYISRCTTAADIWKKFDDLFRTQSKTXXXXXXXXXXXXXKGDL 957
DQ + +LLSS++ ++ ++ C TAA++W + ++ T ++ KG++
Sbjct: 167 DQQVLGYLLSSLTREVLMQVATCDTAAEVWSAIEQMYSTHTRARAINTRFALTNTKKGNM 226
Query: 956 SVEDYILQMTGIANQMRTA-GQXXXXXXXXXXXLNGLTPEFESVVVVLTSRIGNLSISEM 780
S +Y +M + ++M TA G+ + GL + VV + +R+ +S+S++
Sbjct: 227 STPEYFAKMKSLGDEMATAGGRPIDEEELIQYIITGLGEGYSEVVSAVCARVEPISVSDL 286
Query: 779 QFVLQSHELRLNQHHSSVTNTLQAFNLQTGPSTPSAHIADKKPFQNHSXXXXXXXXXXXX 600
+ + E R + + T+ N + +
Sbjct: 287 YSQVLNFEARQAIYRGAQEVTVNVANRGGFSHGGRGNSNGGQGGSRGGGGGGHGRGNGGG 346
Query: 599 XXXXXXXXXXXGARIICQICGKNNHIASKCFKRFDQTYSGLDSLHTSPGFSPQP*ANYTT 420
R ICQ+C K H A+ C+ R+D+ Y D+ H +
Sbjct: 347 GRGRGRTPGGVDKRPICQVCFKRGHTAADCWYRYDEDYVP-DAKHVA------------- 392
Query: 419 SAVPNPMPLIQDXXXXXXXXXXXXADNTAGLNASSSTGDWFMDSGSTHHVTSNLGNLTLH 240
A +N+ +W++D+G+T HVT L LT+
Sbjct: 393 ---------------------------AAAVNSYGVDTNWYIDTGATDHVTGELDKLTMK 425
Query: 239 SPYQGKAQLVVGNGS 195
Y G Q+ +G+
Sbjct: 426 EKYNGGEQIHTASGA 440
Score = 64.7 bits (156), Expect = 1e-06
Identities = 26/58 (44%), Positives = 42/58 (72%)
Frame = -1
Query: 1897 LISKLGLSVKQPCVLWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRY 1724
L+++L + + +WCDN GA L++NP FHARTKHIE+D HF+RE++ ++ I + +
Sbjct: 1086 LLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERLLSRFINLGF 1143
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 431 bits (1109), Expect = e-127
Identities = 218/452 (48%), Positives = 300/452 (66%), Gaps = 19/452 (4%)
Frame = -2
Query: 3150 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 2971
P AL +WK+AMD ++ AL+ N TW LVP + N++ KW++++K K DGS+DR
Sbjct: 748 PRDLHDALHDTNWKHAMDAKFTALLHNKTWHLVPPQKGRNIIDYKWVYKIKRKQDGSLDR 807
Query: 2970 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 2791
KARLVA+GF+Q GID+ DTF+P+VK TIRI+ ++AVSRGW + Q+DV NAFL G L+
Sbjct: 808 YKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWTLRQLDVQNAFLHGILE 867
Query: 2790 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLF 2611
E VYM QP GY D P +VCKL ++LYGLKQAP+ WY KL LF
Sbjct: 868 EEVYMKQPPGYEDKVHPDYVCKLDKALYGLKQAPRAWYAKLSQKLQHLGFQGSKADTSLF 927
Query: 2610 FKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKVAD 2431
F N GG ++ VLVYVDDI++ V L+ L F+LK LG+++YFLG+E +K +
Sbjct: 928 FYNKGGLIIFVLVYVDDIIVASSRQDAVPALLKDLQKDFALKDLGDLHYFLGIEVNKASS 987
Query: 2430 GILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDGPLF--DNPSVYRCIIGALQY 2257
GI+LTQ KY++DLL + M +C P TP + K +LH+G L ++ S YR ++GALQY
Sbjct: 988 GIVLTQEKYVTDLLRRVGMTDCKPVSTPLSTSEKLTLHEGDLLGPNDASNYRSVVGALQY 1047
Query: 2256 LTLTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECFT 2077
LTLTRPDI + VNK+ QFLH+P+++HW A KR+LR+L+ LGL + M++ ++
Sbjct: 1048 LTLTRPDIYFPVNKVCQFLHAPTIVHWAAMKRILRYLKQCTKLGLKISK-SKSMLVSGYS 1106
Query: 2076 DADWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITS 1897
DADWA +I DRRST G+ V+LG NL++W +KKQ V RSSTESEY++LA AT++++WI +
Sbjct: 1107 DADWAGNIDDRRSTGGFAVFLGDNLVSWNAKKQATVPRSSTESEYKALANATAEIMWIQT 1166
Query: 1896 LFQNL-----------------VYLSNNPVFY 1852
L + L YLS+NPVF+
Sbjct: 1167 LLEELSVPSPPMARLWCDNLGAKYLSSNPVFH 1198
Score = 155 bits (391), Expect = 2e-34
Identities = 70/126 (55%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Frame = -3
Query: 3791 ERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDY 3612
ERKH+HIVE GL+LLA ASLP KFW +A+ +LINR+P+ L + SP + LF + PDY
Sbjct: 446 ERKHRHIVEVGLSLLAHASLPLKFWDEAYQSGVYLINRMPTKVLGYSSPLECLFKQTPDY 505
Query: 3611 TFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPS-GRLYIAKTVAFN 3435
L+ FGCAC+P LRPYN+ K+ FR+ +C FL YSP HKG++CL S GR+YI++ V F+
Sbjct: 506 QALRTFGCACWPDLRPYNSHKMHFRSKRCTFLGYSPLHKGFRCLDSSTGRIYISRDVVFD 565
Query: 3434 ETEFPY 3417
E+ FP+
Sbjct: 566 ESVFPF 571
Score = 119 bits (299), Expect = 1e-23
Identities = 87/380 (22%), Positives = 152/380 (40%), Gaps = 4/380 (1%)
Frame = -3
Query: 1322 TFTVRLDRSNFSFWRTQVLATVRAHGFEDFLLGTTPPPA--IFQDSSTSGNRVPNPEYTI 1149
T T +L + N+ W+ QVLA +R + +L G T P+ I + V NP
Sbjct: 17 TVTEKLSKGNYLIWKVQVLAVIRGARLDSYLTGATKKPSATIIIKKNEKEVEVSNPAVDE 76
Query: 1148 WMRKDQFLFSWLLSSISESMIGYISRCTTAADIWKKFDDLFRTQSKTXXXXXXXXXXXXX 969
W+ DQ + +LL+++S ++ ++ C++AA +W + +F + ++
Sbjct: 77 WIANDQQVLGYLLTTMSRDVLSQVATCSSAASLWSTIEGMFSSATRARSINTKIALTNTK 136
Query: 968 KGDLSVEDYILQMTGIANQMRTAGQXXXXXXXXXXXLNGLTPEFESVVVVLTSRIGNLSI 789
KGDL + +Y+ +M +A+++ T+G+ + GL +FE ++ L S+ ++S+
Sbjct: 137 KGDLGIAEYVSKMRVLADELATSGKPVDEEDLISYIIAGLDEDFEPIISSLVSKSEHVSL 196
Query: 788 SEMQFVLQSHELRLNQHHSSVTNTLQAFNLQTGPSTPSAHIADKKPFQNH-SXXXXXXXX 612
E L S E R+ N N G P +K+P Q
Sbjct: 197 GEAYSQLLSFEQRMKMRQEHSANLA---NRGRGRGNPGRGRNNKQPQQQQRGHGGNSRGR 253
Query: 611 XXXXXXXXXXXXXXXGARIICQICGKNNHIASKCFKRFDQTYSGLDSLHTSPGFSPQP*A 432
R CQ+C K H C+ R+D+ +
Sbjct: 254 GRGNNSNQRQGGNGVDYRPKCQLCYKRGHTVIDCWYRYDEDF------------------ 295
Query: 431 NYTTSAVPNPMPLIQDXXXXXXXXXXXXADNTAGLNASSST-GDWFMDSGSTHHVTSNLG 255
VP+ + AG AS +W++D+G+T HVT L
Sbjct: 296 ------VPD--------------------EKYAGTTASYGVDSNWYVDTGTTDHVTGELE 329
Query: 254 NLTLHSPYQGKAQLVVGNGS 195
LT+ Y+G+ Q+ NG+
Sbjct: 330 KLTIRDKYKGQDQVQTANGA 349
Score = 88.2 bits (217), Expect = 6e-14
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Frame = -1
Query: 1879 LSVKQPCV--LWCDNAGAITLASNPAFHARTKHIEIDVHFIREKVSNKQIEVRYVPSEDQ 1706
LSV P + LWCDN GA L+SNP FHARTKHIE+D HF+RE++ K +EV ++P+ DQ
Sbjct: 1171 LSVPSPPMARLWCDNLGAKYLSSNPVFHARTKHIEVDYHFVRERMQRKLLEVEFIPTGDQ 1230
Query: 1705 TADILTKSLSILRFQRLSNQL 1643
AD TK+LS + + L
Sbjct: 1231 VADGFTKALSARQLENFKYNL 1251
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 436 bits (1120), Expect = e-127
Identities = 219/452 (48%), Positives = 299/452 (66%), Gaps = 19/452 (4%)
Frame = -2
Query: 3150 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 2971
PT +AL +WK AMD EY AL+KN TW LVP N++ KW++++K K DG++DR
Sbjct: 938 PTNDLEALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDR 997
Query: 2970 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 2791
KARLVA+GF+Q GID+ DTF+P+VK TIRI+ +LAVS+GW + Q+DV NAFL G L+
Sbjct: 998 YKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLE 1057
Query: 2790 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGLKQAPKIWYDKLRAFXXXXXXXXXXXXXXLF 2611
E VYM QP G+ DPTKP HVCKL ++LYGLKQAP+ W+ +L LF
Sbjct: 1058 EEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLF 1117
Query: 2610 FKNSGGALLMVLVYVDDILITEDDVAVVSHLITLLDNKFSLKILGEVNYFLGLEAHKVAD 2431
F N G + VLVYVDDI++ + L+ L +F+LK LGE++YFLG+E KV +
Sbjct: 1118 FLNKGDITMFVLVYVDDIIVASSSERATAALLQDLKGEFALKDLGELHYFLGIEVSKVQN 1177
Query: 2430 GILLTQTKYISDLLVKASMENCSPAPTPCCPNSKFSLHDGPLF--DNPSVYRCIIGALQY 2257
GI+L Q KY +DLL K M +C PA TP + K SLH+G L ++ S YR ++GALQY
Sbjct: 1178 GIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQY 1237
Query: 2256 LTLTRPDISYIVNKLSQFLHSPSVLHWKACKRVLRFLQGTKHLGLLFRPLTGDMILECFT 2077
LTLTRPDI++ VNK+ QFLH+P+ +HW A KR+LR+L+ LGL +G ++ F+
Sbjct: 1238 LTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHK-SGSTLVSGFS 1296
Query: 2076 DADWASSIHDRRSTSGYCVYLGRNLIAWISKKQPVVARSSTESEYRSLALATSKLVWITS 1897
DADWA + DRRST G+ ++LG NL++W ++KQ V+RSS ESEY+++A AT++++W+ +
Sbjct: 1297 DADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSIESEYKAIANATAEIMWVQT 1356
Query: 1896 LFQNL-----------------VYLSNNPVFY 1852
L L YLS NPVF+
Sbjct: 1357 LLAELEIKSPKAAKIWCDNLGAKYLSANPVFH 1388
Score = 160 bits (406), Expect = 3e-36
Identities = 74/126 (58%), Positives = 98/126 (77%), Gaps = 1/126 (0%)
Frame = -3
Query: 3791 ERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSALHFQSPYQQLFNKAPDY 3612
ERKH+HIVE GL+LL+ AS+P KFW +AF AT+LINR+PS +H SP ++LF + PDY
Sbjct: 644 ERKHRHIVEIGLSLLSHASMPLKFWDEAFQAATYLINRVPSRVIHNISPLEKLFKQKPDY 703
Query: 3611 TFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCLHPS-GRLYIAKTVAFN 3435
+ L+IFGCAC+P LRPYN KLQFR+ +C+FL +S HKG+KCL S GR+YI++ V F+
Sbjct: 704 SSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRDVVFD 763
Query: 3434 ETEFPY 3417
E FP+
Sbjct: 764 ENIFPF 769
Score = 91.7 bits (226), Expect(2) = 1e-18
Identities = 87/405 (21%), Positives = 154/405 (38%), Gaps = 3/405 (0%)
Frame = -3
Query: 1310 RLDRSNFSFWRTQVLATVRAHGFEDFLLGTT--PPPAIFQDSSTSGNRVPNPEYTIWMRK 1137
+L ++N + W+ QV A VR + L G T PP I + + PN + W
Sbjct: 159 KLGKANHALWKVQVSAAVRGARLQGHLTGATKRPPAEIAVTKDGATKKEPNLAHEDWEAT 218
Query: 1136 DQFLFSWLLSSISESMIGYISRCTTAADIWKKFDDLFRTQSKTXXXXXXXXXXXXXKGDL 957
DQ + +LLSS++ M + T ++ KG++
Sbjct: 219 DQQVLGYLLSSLTREM--------------------YSTHTRARAINTRFALTNTKKGNM 258
Query: 956 SVEDYILQMTGIANQMRTAG-QXXXXXXXXXXXLNGLTPEFESVVVVLTSRIGNLSISEM 780
S +Y +M + ++M TAG + + GL + VV + +R+ +S+S++
Sbjct: 259 STPEYFAKMKSLGDEMATAGGRPIDEEELIQYIITGLGEGYSEVVSAVCARVEPISVSDL 318
Query: 779 QFVLQSHELRLNQHHSSVTNTLQAFNLQTGPSTPSAHIADKKPFQNHSXXXXXXXXXXXX 600
+ + E R + + T+ N + G S ++ +
Sbjct: 319 YSQVLNFEARQAIYRGAQEVTVNVAN-RGGFSHGGRGNSNGGQGGSRGGGGGHGRRNGGG 377
Query: 599 XXXXXXXXXXXGARIICQICGKNNHIASKCFKRFDQTYSGLDSLHTSPGFSPQP*ANYTT 420
R ICQ+C K H A+ C+ R+D+ Y D+ H +
Sbjct: 378 VRGRGRTPGGVDKRPICQVCFKRGHTAADCWYRYDEDYVP-DAKHVA------------- 423
Query: 419 SAVPNPMPLIQDXXXXXXXXXXXXADNTAGLNASSSTGDWFMDSGSTHHVTSNLGNLTLH 240
A +N+ +W++D+G+T HVT L LT+
Sbjct: 424 ---------------------------AAAVNSYGVDTNWYIDTGATDHVTGELDKLTMK 456
Query: 239 SPYQGKAQLVVGNGSSASISKVGSTQFPSLNPSKILTLKHVLFVP 105
Y G Q+ +G+ IS +G + N S+ + L++VL+VP
Sbjct: 457 EKYNGGEQIHTASGAGMDISHIGHAIVHNPN-SRNIHLRNVLYVP 500
Score = 32.7 bits (73), Expect(2) = 1e-18
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 90 DNHVFIEFHESYCLVKDQQTHQVLLRG 10
DN F+E H Y +KDQ T + LL+G
Sbjct: 515 DNSAFLELHRDYFFLKDQITRKTLLKG 541
Score = 62.8 bits (151), Expect = 4e-06
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = -1
Query: 1897 LISKLGLSVKQPCVLWCDNAGAITLASNPAFHARTKHIEIDVHFIREK 1754
L+++L + + +WCDN GA L++NP FHARTKHIE+D HF+RE+
Sbjct: 1357 LLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRER 1404