BLASTX nr result
ID: Rehmannia27_contig00025619
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00025619
(606 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012839814.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 65 2e-34
gb|EPS66084.1| hypothetical protein M569_08688 [Genlisea aurea] 70 1e-32
gb|EYU35387.1| hypothetical protein MIMGU_mgv1a001660mg [Erythra... 65 5e-32
ref|XP_012842389.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 66 3e-25
ref|XP_015968747.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 60 3e-24
ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 62 3e-24
ref|XP_015084906.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 62 6e-24
gb|KHN17840.1| DEAD-box ATP-dependent RNA helicase 3, chloroplas... 57 2e-23
ref|XP_003555166.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 57 2e-23
ref|XP_012569593.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 60 3e-23
ref|XP_011087584.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 70 5e-23
ref|XP_015939503.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 63 5e-23
ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 59 5e-23
emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera] 55 6e-23
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 55 6e-23
ref|XP_010094933.1| DEAD-box ATP-dependent RNA helicase 3 [Morus... 63 7e-23
ref|XP_014495890.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 58 7e-23
ref|XP_014495889.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 58 1e-22
ref|XP_010070121.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 60 2e-22
gb|KCW58706.1| hypothetical protein EUGRSUZ_H01352 [Eucalyptus g... 60 2e-22
>ref|XP_012839814.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Erythranthe guttata]
Length = 869
Score = 64.7 bits (156), Expect(5) = 2e-34
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
IIKGL D+EQ RRGRLPKVLVLAPTRELAKQVEKEF +
Sbjct: 285 IIKGLEDSEQTNGPPRRGRLPKVLVLAPTRELAKQVEKEFMD 326
Score = 59.7 bits (143), Expect(5) = 2e-34
Identities = 27/37 (72%), Positives = 35/37 (94%)
Frame = +1
Query: 304 VDELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
VDELD++KL LP+R+V+TLEKRG ++LFPIQRAVL+P
Sbjct: 224 VDELDMTKLKLPRRLVETLEKRGISQLFPIQRAVLVP 260
Score = 47.4 bits (111), Expect(5) = 2e-34
Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 8/49 (16%)
Frame = +3
Query: 69 PLWLHFSIARNPFKAFSSVAVHP--------NSSISFVPSAVATPDSSI 191
PL LHFS A PF+AFSS + +SISFVPSAVATP+SS+
Sbjct: 138 PLSLHFSTAHYPFRAFSSSSAAAAARLKNGAGASISFVPSAVATPNSSV 186
Score = 33.9 bits (76), Expect(5) = 2e-34
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPI 476
AKTGTGKTLAFGIPI
Sbjct: 271 AKTGTGKTLAFGIPI 285
Score = 27.7 bits (60), Expect(5) = 2e-34
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 5 FIHYQSFLYVPKHPISRPL*KTLMA 79
FIH S L +P PISR L KT A
Sbjct: 110 FIHCWSLLNIPDQPISRELQKTTAA 134
>gb|EPS66084.1| hypothetical protein M569_08688 [Genlisea aurea]
Length = 775
Score = 70.1 bits (170), Expect(4) = 1e-32
Identities = 34/42 (80%), Positives = 39/42 (92%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
I+KGL++A Q + S+RRGRLPKVLVLAPTRELAKQVEKEFKE
Sbjct: 163 ILKGLDEASQERGSLRRGRLPKVLVLAPTRELAKQVEKEFKE 204
Score = 63.9 bits (154), Expect(4) = 1e-32
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = +1
Query: 304 VDELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
VDELDI+KLGL QR+V+TLEKRG T+LFPIQRAVL+P
Sbjct: 102 VDELDITKLGLSQRLVETLEKRGITQLFPIQRAVLVP 138
Score = 39.7 bits (91), Expect(4) = 1e-32
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Frame = +3
Query: 3 SSSIIRVFSMYQNTPSP-DLCKKPLW---LHFSIARNPFKAFSS----VAVHPNSSISFV 158
SSS + V S+ P D K+ ++ LHFS A NP +AFSS + +SS SF
Sbjct: 4 SSSTVGVSSICPIAAHPNDYAKRTVYHLSLHFSAAHNPLRAFSSGVRLGSASGSSSNSFS 63
Query: 159 PSAVATPDSSI 191
SAV TP+SS+
Sbjct: 64 ASAVFTPNSSV 74
Score = 33.9 bits (76), Expect(4) = 1e-32
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPI 476
AKTGTGKTLAFGIPI
Sbjct: 149 AKTGTGKTLAFGIPI 163
>gb|EYU35387.1| hypothetical protein MIMGU_mgv1a001660mg [Erythranthe guttata]
Length = 777
Score = 64.7 bits (156), Expect(4) = 5e-32
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
IIKGL D+EQ RRGRLPKVLVLAPTRELAKQVEKEF +
Sbjct: 193 IIKGLEDSEQTNGPPRRGRLPKVLVLAPTRELAKQVEKEFMD 234
Score = 59.7 bits (143), Expect(4) = 5e-32
Identities = 27/37 (72%), Positives = 35/37 (94%)
Frame = +1
Query: 304 VDELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
VDELD++KL LP+R+V+TLEKRG ++LFPIQRAVL+P
Sbjct: 132 VDELDMTKLKLPRRLVETLEKRGISQLFPIQRAVLVP 168
Score = 47.4 bits (111), Expect(4) = 5e-32
Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 8/49 (16%)
Frame = +3
Query: 69 PLWLHFSIARNPFKAFSSVAVHP--------NSSISFVPSAVATPDSSI 191
PL LHFS A PF+AFSS + +SISFVPSAVATP+SS+
Sbjct: 46 PLSLHFSTAHYPFRAFSSSSAAAAARLKNGAGASISFVPSAVATPNSSV 94
Score = 33.9 bits (76), Expect(4) = 5e-32
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPI 476
AKTGTGKTLAFGIPI
Sbjct: 179 AKTGTGKTLAFGIPI 193
>ref|XP_012842389.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Erythranthe guttata] gi|604327447|gb|EYU33253.1|
hypothetical protein MIMGU_mgv1a001505mg [Erythranthe
guttata]
Length = 806
Score = 65.9 bits (159), Expect(3) = 3e-25
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = +1
Query: 304 VDELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
VDELD+SKLGLPQR+VDTL KRG T+LFPIQR+VL+P
Sbjct: 114 VDELDVSKLGLPQRLVDTLAKRGITQLFPIQRSVLVP 150
Score = 62.8 bits (151), Expect(3) = 3e-25
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
I+KGL DAE + S+RRGR PKVLVLAPTRELAKQVEKEF E
Sbjct: 175 ILKGL-DAENERGSLRRGRFPKVLVLAPTRELAKQVEKEFTE 215
Score = 34.3 bits (77), Expect(3) = 3e-25
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPIQLSKDS 494
AKTGTGKTLAFGIPI D+
Sbjct: 161 AKTGTGKTLAFGIPILKGLDA 181
>ref|XP_015968747.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Arachis duranensis]
Length = 773
Score = 60.1 bits (144), Expect(4) = 3e-24
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +1
Query: 307 DELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
+ELD+SKLGLP R+VDTL KRG + LFPIQRAVL+P
Sbjct: 120 EELDVSKLGLPSRLVDTLHKRGISHLFPIQRAVLVP 155
Score = 58.5 bits (140), Expect(4) = 3e-24
Identities = 30/42 (71%), Positives = 32/42 (76%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
IIKGL + E R GRLP+VLVLAPTRELAKQVEKE KE
Sbjct: 180 IIKGLTEDEHSSSLRRSGRLPRVLVLAPTRELAKQVEKEIKE 221
Score = 33.9 bits (76), Expect(4) = 3e-24
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPI 476
AKTGTGKTLAFGIPI
Sbjct: 166 AKTGTGKTLAFGIPI 180
Score = 26.2 bits (56), Expect(4) = 3e-24
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +3
Query: 144 SISFVPSAVATPDSSI 191
++SFV SA+ATP+SS+
Sbjct: 67 TVSFVTSAIATPNSSV 82
>ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Solanum lycopersicum]
Length = 746
Score = 61.6 bits (148), Expect(3) = 3e-24
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +1
Query: 307 DELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
DEL +SKLGLP R+VD LEKRG T+LFPIQRAVL+P
Sbjct: 103 DELSVSKLGLPHRLVDALEKRGITQLFPIQRAVLVP 138
Score = 57.0 bits (136), Expect(3) = 3e-24
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
++K L+ E+ +++ RRGRLPKVLVLAPTRELA QVEKE KE
Sbjct: 163 VLKKLSTDEEMRNTQRRGRLPKVLVLAPTRELANQVEKEMKE 204
Score = 40.4 bits (93), Expect(3) = 3e-24
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Frame = +3
Query: 3 SSSIIRVFSMYQNTPSPDLCKK-----PLWLHFSIARNPFKAFSSVAVHPNSSISFVPSA 167
SSSII V S+YQ PS +L ++ PL L FSI ++ F VH F+ SA
Sbjct: 4 SSSIIGVSSIYQTNPSLELSRRPTATPPLSLPFSIEKSNFH------VHVRLRRPFLASA 57
Query: 168 VATPDSSI 191
V TP SS+
Sbjct: 58 VVTPTSSV 65
>ref|XP_015084906.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Solanum pennellii]
Length = 746
Score = 61.6 bits (148), Expect(3) = 6e-24
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +1
Query: 307 DELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
DEL +SKLGLP R+VD LEKRG T+LFPIQRAVL+P
Sbjct: 103 DELSVSKLGLPHRLVDALEKRGITQLFPIQRAVLVP 138
Score = 55.5 bits (132), Expect(3) = 6e-24
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
++K L+ E+ + + RRGRLPKVLVLAPTRELA QVEKE KE
Sbjct: 163 VLKKLSTDEEMRYTQRRGRLPKVLVLAPTRELANQVEKEMKE 204
Score = 41.2 bits (95), Expect(3) = 6e-24
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +3
Query: 3 SSSIIRVFSMYQNTPSPDLCKK-----PLWLHFSIARNPFKAFSSVAVHPNSSISFVPSA 167
SSSII V S+YQ PS +L ++ PL L FSI ++ F VH F+ SA
Sbjct: 4 SSSIIGVSSIYQTNPSLELSRRPTATPPLSLPFSIEKSNFH------VHVRLRRPFLASA 57
Query: 168 VATPDSSI 191
V TP+SS+
Sbjct: 58 VVTPNSSV 65
>gb|KHN17840.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Glycine soja]
Length = 736
Score = 56.6 bits (135), Expect(4) = 2e-23
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
I+KGL D ++ R GRLPK LVLAPTRELAKQVEKE +E
Sbjct: 152 ILKGLTDDDEQSSHRRSGRLPKALVLAPTRELAKQVEKEIQE 193
Score = 53.5 bits (127), Expect(4) = 2e-23
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1
Query: 310 ELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
ELDISKLGLP +V +L++RG T LFPIQRAVL+P
Sbjct: 93 ELDISKLGLPSPLVHSLQQRGITSLFPIQRAVLVP 127
Score = 33.9 bits (76), Expect(4) = 2e-23
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPI 476
AKTGTGKTLAFGIPI
Sbjct: 138 AKTGTGKTLAFGIPI 152
Score = 32.0 bits (71), Expect(4) = 2e-23
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = +3
Query: 48 SPDLCKKPLWLHFSIARNPFKAFSSVAVHP-----NSSISFVPSAVATPDSSI 191
S +CK P F + R P +SV + N+++S +PSA+ATP SSI
Sbjct: 10 SISICKNP---SFQLLRRPTATTTSVFFNTLPRNRNATLSSLPSAIATPTSSI 59
>ref|XP_003555166.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Glycine max]
gi|947040689|gb|KRG90413.1| hypothetical protein
GLYMA_20G089600 [Glycine max]
Length = 736
Score = 56.6 bits (135), Expect(4) = 2e-23
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
I+KGL D ++ R GRLPK LVLAPTRELAKQVEKE +E
Sbjct: 152 ILKGLTDDDEQSSHRRSGRLPKALVLAPTRELAKQVEKEIQE 193
Score = 53.5 bits (127), Expect(4) = 2e-23
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1
Query: 310 ELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
ELDISKLGLP +V +L++RG T LFPIQRAVL+P
Sbjct: 93 ELDISKLGLPSPLVHSLQQRGITSLFPIQRAVLVP 127
Score = 33.9 bits (76), Expect(4) = 2e-23
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPI 476
AKTGTGKTLAFGIPI
Sbjct: 138 AKTGTGKTLAFGIPI 152
Score = 32.0 bits (71), Expect(4) = 2e-23
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = +3
Query: 48 SPDLCKKPLWLHFSIARNPFKAFSSVAVHP-----NSSISFVPSAVATPDSSI 191
S +CK P F + R P +SV + N+++S +PSA+ATP SSI
Sbjct: 10 SISICKNP---SFQLLRRPTATTTSVFFNTLPRNRNATLSSLPSAIATPTSSI 59
>ref|XP_012569593.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Cicer arietinum]
Length = 742
Score = 59.7 bits (143), Expect(4) = 3e-23
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +1
Query: 307 DELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
DELDISKL LP R+VD+L RG TELFPIQRAVL+P
Sbjct: 97 DELDISKLNLPSRLVDSLRNRGITELFPIQRAVLVP 132
Score = 49.7 bits (117), Expect(4) = 3e-23
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
II GLND DS RLP+ LVLAPTRELAKQVEKE KE
Sbjct: 157 IINGLND---DGDSGSYRRLPRALVLAPTRELAKQVEKEIKE 195
Score = 33.9 bits (76), Expect(4) = 3e-23
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPI 476
AKTGTGKTLAFGIPI
Sbjct: 143 AKTGTGKTLAFGIPI 157
Score = 32.0 bits (71), Expect(4) = 3e-23
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 117 SSVAVHPNSSISFVPSAVATPDSSIS 194
+++ H NSS F+PSAVATP+SS S
Sbjct: 45 NNLLTHNNSSDRFLPSAVATPNSSSS 70
>ref|XP_011087584.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Sesamum indicum]
Length = 770
Score = 70.5 bits (171), Expect(2) = 5e-23
Identities = 38/42 (90%), Positives = 39/42 (92%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
IIKGL DAEQ K S+RRGRLPKVLVLAPTRELAKQVEKEFKE
Sbjct: 174 IIKGL-DAEQEKGSLRRGRLPKVLVLAPTRELAKQVEKEFKE 214
Score = 64.7 bits (156), Expect(2) = 5e-23
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +1
Query: 307 DELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
DELD+SKLGLPQR+V TLEKRG T+LFPIQRAVL+P
Sbjct: 114 DELDVSKLGLPQRLVATLEKRGITQLFPIQRAVLVP 149
Score = 63.2 bits (152), Expect = 2e-08
Identities = 59/172 (34%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Frame = +3
Query: 3 SSSIIRVFSMYQNTPSPDLCKKP-----LWLHFSIARNPFKAFS---SVAVHPNSSISFV 158
SSSII V S+YQ PS D K+P L LHFS A NPF+AFS + +S SFV
Sbjct: 4 SSSIIGVSSIYQTNPSLDHSKRPTSAPPLALHFSAAHNPFRAFSFAGRLKAAAGASNSFV 63
Query: 159 PSAVATPDSSISVRTHXXXXXXXXXXXXXXXSPGMEILRVKWGRLKWG------CGRIGY 320
SAV TP+SS+ E ++G ++ G ++G
Sbjct: 64 ASAVVTPNSSVLSEEAFKGLGGFGRSASDVSGSEYEESEEEFGEIEAGSADELDVSKLGL 123
Query: 321 FQIRFASTCCGHA*EAWDY*AFSYSESCFDTXXXXXXAKTGTGKTLAFGIPI 476
Q R +T + + AKTGTGKTLAFGIPI
Sbjct: 124 PQ-RLVATLEKRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPI 174
>ref|XP_015939503.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Arachis duranensis]
Length = 762
Score = 62.8 bits (151), Expect(3) = 5e-23
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +1
Query: 307 DELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
DELDISKLGLP R+VD+L+KRG T LFPIQRAVL+P
Sbjct: 123 DELDISKLGLPSRLVDSLQKRGITSLFPIQRAVLVP 158
Score = 58.5 bits (140), Expect(3) = 5e-23
Identities = 35/43 (81%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRR-GRLPKVLVLAPTRELAKQVEKEFKE 604
IIKGL D EQG S RR G LPKVLVLAPTRELAKQVEKE KE
Sbjct: 183 IIKGLTDDEQG--SFRRSGCLPKVLVLAPTRELAKQVEKEIKE 223
Score = 33.9 bits (76), Expect(3) = 5e-23
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPI 476
AKTGTGKTLAFGIPI
Sbjct: 169 AKTGTGKTLAFGIPI 183
>ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Solanum tuberosum]
Length = 744
Score = 59.3 bits (142), Expect(3) = 5e-23
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +1
Query: 307 DELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
DEL +SKLGLP R+V+ LEKRG T+LFPIQRAVL+P
Sbjct: 103 DELAVSKLGLPHRLVEALEKRGITQLFPIQRAVLVP 138
Score = 56.6 bits (135), Expect(3) = 5e-23
Identities = 27/42 (64%), Positives = 35/42 (83%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
++K L+ E+ +++ RRGRLPK+LVLAPTRELA QVEKE KE
Sbjct: 163 VLKKLSTDEEMRNTQRRGRLPKILVLAPTRELANQVEKEMKE 204
Score = 39.3 bits (90), Expect(3) = 5e-23
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Frame = +3
Query: 3 SSSIIRVFSMYQNTPSPDLCKK-----PLWLHFSIARNPFKAFSSVAVHPNSSISFVPSA 167
SSSII V S+YQ PS +L ++ PL L FS ++ F VH F+ SA
Sbjct: 4 SSSIIGVSSIYQTNPSLELSRRPTATPPLSLPFSTEKSNFH------VHVRLRRPFLASA 57
Query: 168 VATPDSSI 191
V TP+SS+
Sbjct: 58 VVTPNSSV 65
>emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]
Length = 786
Score = 55.1 bits (131), Expect(4) = 6e-23
Identities = 30/43 (69%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRR-GRLPKVLVLAPTRELAKQVEKEFKE 604
IIK L++ ++ + S RR GRLP+VLVLAPTRELAKQVEKE KE
Sbjct: 174 IIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIKE 216
Score = 53.9 bits (128), Expect(4) = 6e-23
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +1
Query: 307 DELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
DEL +++LGLP R+V++LE+RG T LFPIQRAVL+P
Sbjct: 114 DELALAQLGLPPRLVESLEQRGITHLFPIQRAVLVP 149
Score = 35.0 bits (79), Expect(4) = 6e-23
Identities = 18/22 (81%), Positives = 20/22 (90%), Gaps = 2/22 (9%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPI--QLSKD 491
AKTGTGKTLAFGIPI +LS+D
Sbjct: 160 AKTGTGKTLAFGIPIIKRLSED 181
Score = 30.4 bits (67), Expect(4) = 6e-23
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Frame = +3
Query: 3 SSSIIRVFSMYQNTP---SPDLCKKPLWLHFSIARN--PFKAFSSVAVHPNS-------S 146
+SSII V S+YQ T S L L FS + FKA ++ + S
Sbjct: 2 ASSIIGVSSVYQTTALELSRRTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRSFKQG 61
Query: 147 ISFVPSAVATPDSSIS 194
ISFVPSA+ATP+S +S
Sbjct: 62 ISFVPSAIATPNSVLS 77
>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
protein product [Vitis vinifera]
Length = 764
Score = 55.1 bits (131), Expect(4) = 6e-23
Identities = 30/43 (69%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRR-GRLPKVLVLAPTRELAKQVEKEFKE 604
IIK L++ ++ + S RR GRLP+VLVLAPTRELAKQVEKE KE
Sbjct: 174 IIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIKE 216
Score = 53.9 bits (128), Expect(4) = 6e-23
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +1
Query: 307 DELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
DEL +++LGLP R+V++LE+RG T LFPIQRAVL+P
Sbjct: 114 DELALAQLGLPPRLVESLEQRGITHLFPIQRAVLVP 149
Score = 35.0 bits (79), Expect(4) = 6e-23
Identities = 18/22 (81%), Positives = 20/22 (90%), Gaps = 2/22 (9%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPI--QLSKD 491
AKTGTGKTLAFGIPI +LS+D
Sbjct: 160 AKTGTGKTLAFGIPIIKRLSED 181
Score = 30.4 bits (67), Expect(4) = 6e-23
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Frame = +3
Query: 3 SSSIIRVFSMYQNTP---SPDLCKKPLWLHFSIARN--PFKAFSSVAVHPNS-------S 146
+SSII V S+YQ T S L L FS + FKA ++ + S
Sbjct: 2 ASSIIGVSSVYQTTALELSRRTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRSFKQG 61
Query: 147 ISFVPSAVATPDSSIS 194
ISFVPSA+ATP+S +S
Sbjct: 62 ISFVPSAIATPNSVLS 77
>ref|XP_010094933.1| DEAD-box ATP-dependent RNA helicase 3 [Morus notabilis]
gi|587868209|gb|EXB57576.1| DEAD-box ATP-dependent RNA
helicase 3 [Morus notabilis]
Length = 810
Score = 62.8 bits (151), Expect(4) = 7e-23
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = +1
Query: 307 DELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
DEL ISKLGLPQR+VD+LEKRG T LFPIQRAVL+P
Sbjct: 108 DELAISKLGLPQRLVDSLEKRGITHLFPIQRAVLVP 143
Score = 50.8 bits (120), Expect(4) = 7e-23
Identities = 29/43 (67%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRG-RLPKVLVLAPTRELAKQVEKEFKE 604
IIK L + ++ + S RR RLPK LVLAPTRELAKQVEKE KE
Sbjct: 168 IIKRLTEDDEQRGSRRRSSRLPKGLVLAPTRELAKQVEKEIKE 210
Score = 33.9 bits (76), Expect(4) = 7e-23
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPI 476
AKTGTGKTLAFGIPI
Sbjct: 154 AKTGTGKTLAFGIPI 168
Score = 26.6 bits (57), Expect(4) = 7e-23
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = +3
Query: 6 SSIIRVFSMYQNTPSPDLCKKPLWLHFSIARNPF---KAFSSVAVHPN----SSISFVPS 164
+SII V S+YQ TPS + ++ S + PF F+SV N SS V S
Sbjct: 2 ASIIGVSSIYQ-TPSLEPYRRVAAATSSPSSLPFPDKSHFNSVLRAYNCKSGSSSRLVAS 60
Query: 165 AVATPDSSIS 194
A+ATP+S +S
Sbjct: 61 AIATPNSVLS 70
>ref|XP_014495890.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like isoform X2 [Vigna radiata var.
radiata]
Length = 776
Score = 57.8 bits (138), Expect(4) = 7e-23
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +1
Query: 307 DELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
DELDISKL LP R+VD+L+ RG T LFPIQRAVL+P
Sbjct: 113 DELDISKLDLPSRLVDSLKSRGITHLFPIQRAVLVP 148
Score = 57.8 bits (138), Expect(4) = 7e-23
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
+IKGL + E + S+R GRLP+VLVLAPTRELAKQVEKE KE
Sbjct: 173 VIKGLTEDED-EPSLRSGRLPRVLVLAPTRELAKQVEKEIKE 213
Score = 33.5 bits (75), Expect(4) = 7e-23
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPI 476
AKTGTGKTLAFGIP+
Sbjct: 159 AKTGTGKTLAFGIPV 173
Score = 25.0 bits (53), Expect(4) = 7e-23
Identities = 9/14 (64%), Positives = 14/14 (100%)
Frame = +3
Query: 150 SFVPSAVATPDSSI 191
+F+PSA+ATP+SS+
Sbjct: 65 TFLPSAIATPNSSL 78
>ref|XP_014495889.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like isoform X1 [Vigna radiata var.
radiata]
Length = 777
Score = 57.8 bits (138), Expect(4) = 1e-22
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +1
Query: 307 DELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
DELDISKL LP R+VD+L+ RG T LFPIQRAVL+P
Sbjct: 113 DELDISKLDLPSRLVDSLKSRGITHLFPIQRAVLVP 148
Score = 57.0 bits (136), Expect(4) = 1e-22
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
+IKGL + E R GRLP+VLVLAPTRELAKQVEKE KE
Sbjct: 173 VIKGLTEDEDEPSLRRSGRLPRVLVLAPTRELAKQVEKEIKE 214
Score = 33.5 bits (75), Expect(4) = 1e-22
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPI 476
AKTGTGKTLAFGIP+
Sbjct: 159 AKTGTGKTLAFGIPV 173
Score = 25.0 bits (53), Expect(4) = 1e-22
Identities = 9/14 (64%), Positives = 14/14 (100%)
Frame = +3
Query: 150 SFVPSAVATPDSSI 191
+F+PSA+ATP+SS+
Sbjct: 65 TFLPSAIATPNSSL 78
>ref|XP_010070121.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Eucalyptus grandis] gi|629092710|gb|KCW58705.1|
hypothetical protein EUGRSUZ_H01352 [Eucalyptus grandis]
Length = 784
Score = 59.7 bits (143), Expect(4) = 2e-22
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = +1
Query: 307 DELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
DEL +SKLGLPQR+V++LEKRG T+LFPIQRAVL P
Sbjct: 142 DELALSKLGLPQRLVESLEKRGITQLFPIQRAVLTP 177
Score = 55.1 bits (131), Expect(4) = 2e-22
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
I+K L D ++ + S RRGRLP+VL LAPTRELAKQVEKE KE
Sbjct: 202 ILKRLTDGDEHR-SPRRGRLPRVLALAPTRELAKQVEKEIKE 242
Score = 33.9 bits (76), Expect(4) = 2e-22
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPI 476
AKTGTGKTLAFGIPI
Sbjct: 188 AKTGTGKTLAFGIPI 202
Score = 24.3 bits (51), Expect(4) = 2e-22
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +3
Query: 96 RNPFKAFSSVAVHP----NSSISFVPSAVATPDSSIS 194
R PF S V S SFV SA+ATP+S +S
Sbjct: 67 RRPFGLLESGCVKRCGLRRSLSSFVTSAIATPNSVLS 103
>gb|KCW58706.1| hypothetical protein EUGRSUZ_H01352 [Eucalyptus grandis]
Length = 669
Score = 59.7 bits (143), Expect(4) = 2e-22
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = +1
Query: 307 DELDISKLGLPQRVVDTLEKRGTTELFPIQRAVLIP 414
DEL +SKLGLPQR+V++LEKRG T+LFPIQRAVL P
Sbjct: 142 DELALSKLGLPQRLVESLEKRGITQLFPIQRAVLTP 177
Score = 55.1 bits (131), Expect(4) = 2e-22
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +2
Query: 479 IIKGLNDAEQGKDSIRRGRLPKVLVLAPTRELAKQVEKEFKE 604
I+K L D ++ + S RRGRLP+VL LAPTRELAKQVEKE KE
Sbjct: 202 ILKRLTDGDEHR-SPRRGRLPRVLALAPTRELAKQVEKEIKE 242
Score = 33.9 bits (76), Expect(4) = 2e-22
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 432 AKTGTGKTLAFGIPI 476
AKTGTGKTLAFGIPI
Sbjct: 188 AKTGTGKTLAFGIPI 202
Score = 24.3 bits (51), Expect(4) = 2e-22
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +3
Query: 96 RNPFKAFSSVAVHP----NSSISFVPSAVATPDSSIS 194
R PF S V S SFV SA+ATP+S +S
Sbjct: 67 RRPFGLLESGCVKRCGLRRSLSSFVTSAIATPNSVLS 103