BLASTX nr result
ID: Rehmannia27_contig00025392
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00025392
(2878 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177... 271 8e-94
ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424... 289 8e-94
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo... 244 2e-86
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo... 244 2e-86
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo... 250 3e-76
ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178... 275 2e-75
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera] 244 3e-75
gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposo... 232 6e-75
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 233 7e-75
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 228 9e-75
gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposo... 225 1e-74
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo... 247 1e-74
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 253 3e-73
gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposo... 238 5e-72
gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposo... 238 5e-72
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 231 3e-71
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo... 219 6e-71
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo... 238 2e-70
gb|KYP50090.1| Retrovirus-related Pol polyprotein from transposo... 210 6e-70
gb|KYP59043.1| Retrovirus-related Pol polyprotein from transposo... 239 7e-67
>ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177515 [Citrus sinensis]
Length = 1143
Score = 271 bits (693), Expect(4) = 8e-94
Identities = 130/239 (54%), Positives = 167/239 (69%), Gaps = 2/239 (0%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
++LHTD+WGP+ ++S QGY+YYV FVDD TR+TWIFPL TK E L F F+ IE+ F
Sbjct: 597 EILHTDLWGPSPVISPQGYRYYVSFVDDCTRFTWIFPLKTKDETLPVFKIFKTQIEKQFS 656
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
I+ +QSDWG E++S V++L GI FRH CP+TH QNG VERKH HI E+GL LA
Sbjct: 657 RPIKCLQSDWGG--EFRSFVNYLLAEGIQFRHLCPYTHNQNGLVERKHRHITELGLTLLA 714
Query: 814 QASIPSLY*WDTFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLRP 635
QA++P + WD+FH A Y INR+P+P+LS SP++ LF PDY FL+ F C+CF +LR
Sbjct: 715 QAAMPLKFWWDSFHTATYIINRLPTPVLSIKSPYESLFQLSPDYKFLRVFGCSCFLFLRE 774
Query: 634 YYSHKLQFKSTKCI--GYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPFPLLCANKSSG 464
Y HK QF ++KC+ GYS HKGYKCL P+ R YI V F+E+ FP+ L SSG
Sbjct: 775 YNKHKFQFHTSKCVFLGYSPLHKGYKCLHPSGRTYIASHVLFDESSFPYSSLFHVSSSG 833
Score = 61.2 bits (147), Expect(4) = 8e-94
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 40/193 (20%)
Frame = -2
Query: 1638 TKNLVIISKFTKDNSVFIEFHDSLCLVKDKTSRKVLLKGAL**SLCQL------------ 1495
TKNL+ IS+ TKDN++ +EF D C VKDK V+L+G SL +L
Sbjct: 425 TKNLISISRLTKDNNIVVEFTDKFCFVKDKMKNVVILQGKAEKSLYRLLLVSSNKTFITP 484
Query: 1494 -------------DLSHLSSYINTSVSHEK-----NHSALQCNSSSIVSCKPVFPAAL-- 1375
L+HLS + + S + + SA+ C +S + VF L
Sbjct: 485 SGQSYSANVESTEPLTHLSMFSSVSSDFKNKTNCLHTSAVPCINSECLLSTSVFHQRLGH 544
Query: 1374 -TCNIANSDVVFVA**TWTSL*CCTYNYSQTINIYADNNKHFFS-DACKLGKQHNMSFLL 1201
+ ++ N + T ++ +TIN N+ F S DACK+GK H + F +
Sbjct: 545 PSSHVLNHVIK-------------TCSFVKTIN----GNRTFDSCDACKMGKMHRLHFSV 587
Query: 1200 ------FPQKLLH 1180
FP ++LH
Sbjct: 588 TETKTKFPLEILH 600
Score = 59.7 bits (143), Expect(4) = 8e-94
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Frame = -3
Query: 1841 SNWFMDSSATHHVTSHHQNIDIRADYKDKDKLVVGNGSNLSISHVGSTLIPISSKSP--- 1671
+NW++DS ATHH+T+ N+ + + KL+VGNG+ L I+H+GS ++ +
Sbjct: 351 ANWYLDSGATHHLTNDMNNMHVSESFTGISKLIVGNGAGLDITHLGSAVLKMHENEDNAL 410
Query: 1670 ---LLHNILCVPKIQRIL 1626
L++IL VP+I + L
Sbjct: 411 SILKLNDILLVPQITKNL 428
Score = 25.8 bits (55), Expect(4) = 8e-94
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -2
Query: 2010 TCQLCGKPNHLATKCYKRFD-INFAGY 1933
TCQ+C K H A C+K + IN Y
Sbjct: 303 TCQICLKTGHTANICWKLTEFINSGAY 329
Score = 72.4 bits (176), Expect = 3e-09
Identities = 33/78 (42%), Positives = 52/78 (66%)
Frame = -1
Query: 2473 SVLETMFQLQLRARVMNLSFQLQSTKKCALSIDEYMLKMRGFADGILAVGQTLTDDELII 2294
S +ET F Q ++R+++L + + ST+K L I++Y +KM+ AD + A G L +D+LI+
Sbjct: 85 SAIETQFGSQSKSRLLHLRYMMNSTRKDDLKINDYFIKMKSIADNMAAAGSALNNDDLIL 144
Query: 2293 YILGGLGVEYESVVVNLT 2240
+IL GLG EY SV +T
Sbjct: 145 HILSGLGPEYNSVATYIT 162
>ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424043 [Ziziphus jujuba]
Length = 1270
Score = 289 bits (739), Expect(3) = 8e-94
Identities = 134/241 (55%), Positives = 173/241 (71%), Gaps = 2/241 (0%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
+L+HTDVWGPA VS +GY+YY+HF+DD++R+TWI+P+ KSE L F F M+ER F
Sbjct: 692 ELVHTDVWGPAATVSKEGYRYYIHFIDDYSRFTWIYPMTVKSEALFIFKHFHVMVERLFD 751
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
K++ +QSDWG EY+ + +LQ+ GI FRH CP+ H QNG+ ERKH HIVE+GL+FLA
Sbjct: 752 TKLKVVQSDWGG--EYRCFLPYLQQVGIKFRHSCPYMHQQNGRAERKHRHIVEVGLSFLA 809
Query: 814 QASIPSLY*WDTFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLRP 635
QA +P LY W+ F A Y INR+P+ IL SPF+LLF PDY FLK F CFP+LRP
Sbjct: 810 QAHMPLLYWWEAFTSAVYVINRLPTAILDFHSPFELLFKKVPDYDFLKVFGSACFPFLRP 869
Query: 634 YYSHKLQFKSTKC--IGYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPFPLLCANKSSGF 461
+ +HK QF + KC IGYS DHKGYKC+S + ++YI R+V+FNE FPF S+GF
Sbjct: 870 FQNHKFQFHTEKCVFIGYSDDHKGYKCMSSSGKIYIARSVNFNEKEFPF-------STGF 922
Query: 460 L 458
L
Sbjct: 923 L 923
Score = 67.0 bits (162), Expect(3) = 8e-94
Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 17/115 (14%)
Frame = -2
Query: 375 SKSPVAHSNTPSINP-----------SSVPDSPLPYPEHTSVMPHVPYSSLSNAHPMTTR 229
S S V+ +N+P++ S +P PL S + P + + HPM TR
Sbjct: 963 SSSSVSLNNSPTLTSGNHNQFDIRLESELPMDPLETSTTLSNVNQNPSQIIISTHPMQTR 1022
Query: 228 SKSGIHKPKVFTLV------VQQEPSTAQLTLSDPKWKNAVDIEMQTLYKNNPWS 82
SKSG+ KPKVF L V EP + L++P+WK A+D E L KNN WS
Sbjct: 1023 SKSGVFKPKVFALTQQAADSVDVEPVSVTDALTNPRWKAAMDQEYGALVKNNTWS 1077
Score = 40.8 bits (94), Expect(3) = 8e-94
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -1
Query: 82 LVPFDDTLNLIEHKWVFRIKYNPDGSI 2
LVP+ +NLI HKW+FR+K N DG++
Sbjct: 1078 LVPYHSGMNLIGHKWIFRVKRNADGTV 1104
Score = 64.7 bits (156), Expect(2) = 7e-13
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Frame = -3
Query: 1847 GGSNWFMDSSATHHVTSHHQNIDIRADYKDKDKLVVGNGSNLSISHVGSTLIP---ISSK 1677
G NW++DS AT+HV + N+ + DY +KL+VGNG +L I+ VG+TLIP +
Sbjct: 409 GDPNWYLDSDATNHVVADGGNLIHQVDYSGNNKLLVGNGQSLDIASVGNTLIPSLICPNY 468
Query: 1676 SPLLHNILCVPKIQRIL 1626
LL N+L VP I + L
Sbjct: 469 VLLLQNVLVVPTIAKNL 485
Score = 39.7 bits (91), Expect(2) = 7e-13
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = -2
Query: 1635 KNLVIISKFTKDNSVFIEFHDSLCLVKDKTSRKVLLKGAL**SLCQLDLSH 1483
KNL+ +SK DN++ ++F+ C +KDK KV+L G L L +L + +
Sbjct: 483 KNLLSVSKLVCDNNITVKFNKHNCFIKDKQMGKVVLHGLLEDGLYKLQIPY 533
Score = 82.0 bits (201), Expect = 3e-12
Identities = 68/234 (29%), Positives = 102/234 (43%), Gaps = 8/234 (3%)
Frame = -1
Query: 2872 FISLISLSNMVSRANYSP*FFLDRSSVRFFNGSFILDWKFFSAGAQYYYNSS*SNEFLVL 2693
F SLIS N S SP SS+ N L WK +
Sbjct: 4 FTSLISEKNENSLVTVSP----FSSSIMKLNSENFLVWKS------------------QI 41
Query: 2692 ANLIRAHGFDSILLGE--------VSSPPQYTSDSFGSSSTNPDYLVWL*KDQFLFSWLL 2537
+++R H D +L + V S + S S VW+ +DQ L WL
Sbjct: 42 LSILRGHKLDKFVLTDEPEFMQVFVFSDAEVNDHSLSKFSVEQQ--VWILQDQLLLGWLT 99
Query: 2536 CSISESMLGHVSRCTTSVELWSVLETMFQLQLRARVMNLSFQLQSTKKCALSIDEYMLKM 2357
+I L + TS LW +E + ++ L +LQ+TKK ++ I +Y KM
Sbjct: 100 TTIEVEELADLVGLKTSRRLWITIEETYSCHSEVFMLQLRNELQTTKKGSMKILDYCKKM 159
Query: 2356 RGFADGILAVGQTLTDDELIIYILGGLGVEYESVVVNLTTRADPLNLLKLIASF 2195
+ AD + + G +++ EL++ IL GLG E+E+V VN T+R PL L+ + F
Sbjct: 160 KKIADKMCSGGFLVSEKELVMCILNGLGPEFETVRVNYTSR-PPLPSLQEVKHF 212
>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 244 bits (622), Expect(4) = 2e-86
Identities = 119/239 (49%), Positives = 163/239 (68%), Gaps = 4/239 (1%)
Frame = -1
Query: 1171 LLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FPF 992
L+++D+WGPA + S+ GY+YYV FVD TR+TWI+ L +K++ + F +F AM++ +
Sbjct: 559 LVYSDLWGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHH 618
Query: 991 KIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLAQ 812
I+A+Q+DWG EY+S ++L GI R CPHTH QNG ERKH HIVE+GL +AQ
Sbjct: 619 PIKALQTDWGG--EYRSFTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQ 676
Query: 811 ASIPSLY*WD-TFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLRP 635
A +P + WD +F A Y INR+PS + N P+ LF PPDY L+ F C+CFP+LRP
Sbjct: 677 AELPMQF-WDHSFLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRP 735
Query: 634 YYSHKLQFKSTKCI--GYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPF-PLLCANKSS 467
Y HKLQF+S +C+ GYS HKGYKCL+ RLYI++ V FNE FP+ L ++K+S
Sbjct: 736 YNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYISKDVVFNETKFPYKDLFSSSKAS 794
Score = 61.2 bits (147), Expect(4) = 2e-86
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Frame = -2
Query: 351 NTPSINPSSVPDSPLPYPE-HTSVMP-HVPYSSL-----------SNAHPMTTRSKSGIH 211
N P+ +PS + DS P HTS +P SS N HPMTTR+K GI
Sbjct: 822 NPPTTSPSLISDSYSPNTAAHTSPSTLSIPTSSNLEPSSSPIIHPHNVHPMTTRAKDGIV 881
Query: 210 KPKV--FTLVVQQEPSTAQLTLSDPKWKNAVDIEMQTLYKNNPWS 82
KP++ L+ Q EP T + LS+P W A+ E L NN WS
Sbjct: 882 KPRLQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWS 926
Score = 56.2 bits (134), Expect(4) = 2e-86
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
Frame = -2
Query: 1638 TKNLVIISKFTKDNSVFIEFHDSLCLVKDKTSRKVLLKGAL**SLCQLDLSHLSSYI-NT 1462
TKNL+ +S+F+KDNSV+ EFH +CLVK + + +VLL+G S+ L + + N
Sbjct: 417 TKNLISVSQFSKDNSVYFEFHPHICLVKSQDTNEVLLQG----SVGSDGLYKFPALLPNP 472
Query: 1461 SVSHEKNHSALQCNSSSIVSCKPVFPAALTCNIANSDVVFVA**TWTSL*CCTYNYSQTI 1282
S + + S + + PV A + + +V + + S+
Sbjct: 473 STQSVQQQQLARIFSVNTAATSPVSFATWHSRLGHPNVDVMK------------HVSRNY 520
Query: 1281 NIY-ADNNKHFFSDACKLGKQHNM 1213
NI NNK F C LGK H +
Sbjct: 521 NIQLVSNNKSNFCTPCCLGKSHRL 544
Score = 32.0 bits (71), Expect(4) = 2e-86
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 82 LVPFDDTLNLIEHKWVFRIKYNPDGSI 2
LVP I KWVFR+K NP+GS+
Sbjct: 927 LVPLPPHRTAIGCKWVFRVKENPNGSV 953
Score = 87.8 bits (216), Expect(2) = 4e-14
Identities = 47/123 (38%), Positives = 71/123 (57%)
Frame = -1
Query: 2584 YLVWL*KDQFLFSWLLCSISESMLGHVSRCTTSVELWSVLETMFQLQLRARVMNLSFQLQ 2405
YL W +DQ L SWL S+S+ ML V C +S +LW + T F + A+ L +L+
Sbjct: 93 YLAWEQQDQLLLSWLQSSMSKDMLTRVIGCKSSFQLWDKIHTYFHSHMNAKARQLRNELR 152
Query: 2404 STKKCALSIDEYMLKMRGFADGILAVGQTLTDDELIIYILGGLGVEYESVVVNLTTRADP 2225
ST LSI EY+L+++ D + A+G +++ E + IL GL EYES V +++R D
Sbjct: 153 STTLDNLSISEYVLRIQTLVDALTAIGDSVSPKEHLDIILEGLPEEYESTVSLISSRFDL 212
Query: 2224 LNL 2216
L +
Sbjct: 213 LTI 215
Score = 20.8 bits (42), Expect(2) = 4e-14
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 2736 NTITIRLDRTNFLFW 2692
+TI+ +LD N+L W
Sbjct: 38 HTISEKLDTKNYLLW 52
Score = 51.6 bits (122), Expect(2) = 5e-06
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Frame = -3
Query: 1841 SNWFMDSSATHHVTSHHQNIDIRADYKDKDKLVVGNGSNLSISHVGSTLI--PISSKSPL 1668
+NW+ DS A++HVT+ QNI ++ D++ VGNG L I+ G T PI+ K
Sbjct: 346 NNWYPDSGASNHVTNVSQNIHQFTPFEGPDQIHVGNGQGLHINSTGVTTFHSPINPKFQF 405
Query: 1667 -LHNILCVPKIQRILSLFLNSLKITLYSLSSMIPF 1566
L+N+L VP I + N + ++ +S + + F
Sbjct: 406 ALNNLLFVPSITK------NLISVSQFSKDNSVYF 434
Score = 29.6 bits (65), Expect(2) = 5e-06
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 2007 CQLCGKPNHLATKCYKRFD 1951
CQ+C + H+A+ CY RFD
Sbjct: 300 CQVCHRYGHVASACYYRFD 318
>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1073
Score = 244 bits (622), Expect(4) = 2e-86
Identities = 119/239 (49%), Positives = 163/239 (68%), Gaps = 4/239 (1%)
Frame = -1
Query: 1171 LLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FPF 992
L+++D+WGPA + S+ GY+YYV FVD TR+TWI+ L +K++ + F +F AM++ +
Sbjct: 224 LVYSDLWGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHH 283
Query: 991 KIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLAQ 812
I+A+Q+DWG EY+S ++L GI R CPHTH QNG ERKH HIVE+GL +AQ
Sbjct: 284 PIKALQTDWGG--EYRSFTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQ 341
Query: 811 ASIPSLY*WD-TFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLRP 635
A +P + WD +F A Y INR+PS + N P+ LF PPDY L+ F C+CFP+LRP
Sbjct: 342 AELPMQF-WDHSFLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRP 400
Query: 634 YYSHKLQFKSTKCI--GYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPF-PLLCANKSS 467
Y HKLQF+S +C+ GYS HKGYKCL+ RLYI++ V FNE FP+ L ++K+S
Sbjct: 401 YNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYISKDVVFNETKFPYKDLFSSSKAS 459
Score = 61.2 bits (147), Expect(4) = 2e-86
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Frame = -2
Query: 351 NTPSINPSSVPDSPLPYPE-HTSVMP-HVPYSSL-----------SNAHPMTTRSKSGIH 211
N P+ +PS + DS P HTS +P SS N HPMTTR+K GI
Sbjct: 487 NPPTTSPSLISDSYSPNTAAHTSPSTLSIPTSSNLEPSSSPIIHPHNVHPMTTRAKDGIV 546
Query: 210 KPKV--FTLVVQQEPSTAQLTLSDPKWKNAVDIEMQTLYKNNPWS 82
KP++ L+ Q EP T + LS+P W A+ E L NN WS
Sbjct: 547 KPRLQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWS 591
Score = 56.2 bits (134), Expect(4) = 2e-86
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
Frame = -2
Query: 1638 TKNLVIISKFTKDNSVFIEFHDSLCLVKDKTSRKVLLKGAL**SLCQLDLSHLSSYI-NT 1462
TKNL+ +S+F+KDNSV+ EFH +CLVK + + +VLL+G S+ L + + N
Sbjct: 82 TKNLISVSQFSKDNSVYFEFHPHICLVKSQDTNEVLLQG----SVGSDGLYKFPALLPNP 137
Query: 1461 SVSHEKNHSALQCNSSSIVSCKPVFPAALTCNIANSDVVFVA**TWTSL*CCTYNYSQTI 1282
S + + S + + PV A + + +V + + S+
Sbjct: 138 STQSVQQQQLARIFSVNTAATSPVSFATWHSRLGHPNVDVMK------------HVSRNY 185
Query: 1281 NIY-ADNNKHFFSDACKLGKQHNM 1213
NI NNK F C LGK H +
Sbjct: 186 NIQLVSNNKSNFCTPCCLGKSHRL 209
Score = 32.0 bits (71), Expect(4) = 2e-86
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 82 LVPFDDTLNLIEHKWVFRIKYNPDGSI 2
LVP I KWVFR+K NP+GS+
Sbjct: 592 LVPLPPHRTAIGCKWVFRVKENPNGSV 618
>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1165
Score = 250 bits (639), Expect(3) = 3e-76
Identities = 119/228 (52%), Positives = 158/228 (69%), Gaps = 2/228 (0%)
Frame = -1
Query: 1171 LLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FPF 992
L+H+DVWGPA I S G+KYYV F+DD++R+TWI+PL KS+V F++F+ ++E F
Sbjct: 425 LVHSDVWGPAPISSVSGFKYYVLFLDDWSRFTWIYPLKQKSDVFQAFIQFRNLVENQFNK 484
Query: 991 KIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLAQ 812
+I+ +Q D G E+KSL L + GI R CP+T QNG+ ERKH H+VE GL LAQ
Sbjct: 485 RIKTLQCDGGG--EFKSLSKVLIKTGIQLRESCPYTSAQNGRAERKHRHVVESGLTLLAQ 542
Query: 811 ASIPSLY*WDTFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLRPY 632
A +P Y W+ F A + INR+P+ ++ N SP+Q LF PDYT +KTF C C+P L+PY
Sbjct: 543 AKMPLHYWWEAFSTAVFLINRLPTQVIKNKSPYQQLFDKNPDYTAMKTFGCACYPCLKPY 602
Query: 631 YSHKLQFKSTKCI--GYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPF 494
HKLQF +TKC+ GYS HKGYKCL+ T R++I+R V FNE FPF
Sbjct: 603 NQHKLQFHTTKCVFLGYSGSHKGYKCLNSTGRIFISRHVVFNEHHFPF 650
Score = 50.8 bits (120), Expect(3) = 3e-76
Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 5/189 (2%)
Frame = -3
Query: 1838 NWFMDSSATHHVTSHHQNIDIRADYKDKDKLVVGNGSNLSISHVGSTLIPISSKSPLLHN 1659
+W+ DS A++HVT + + K L VGNG+NL I G + + KS L +
Sbjct: 232 DWYFDSGASNHVTYDQNKVQEVNENDGKSFLTVGNGANLKIIACGDSSLDTQQKSLNLKD 291
Query: 1658 ILCVPKI-QRILSL----FLNSLKITLYSLSSMIPFVLLRTRLPARCCLKVLCNKVFVNW 1494
IL VPKI + +LS+ F N + + + ++ + + +L R L+ K+
Sbjct: 292 ILYVPKITKNLLSISKLTFDNDIYVEFHDVACFV-----KDKLTGRILLE---GKIKDGL 343
Query: 1493 IFLTCHHISTLLFLMKRITLLFSVIPXXXXXXXXXXXXXXXXXXXXXXXXLWRNKLGHPC 1314
L ST KR + FS+ W KLGHP
Sbjct: 344 YQLPGGSTST----NKRPHVFFSI------------------------KETWHRKLGHPN 375
Query: 1313 NAVLTTILK 1287
+ VL ++K
Sbjct: 376 SKVLNEVMK 384
Score = 36.6 bits (83), Expect(3) = 3e-76
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 2007 CQLCGKPNHLATKCYKRFDINFAGYDN 1927
CQ+C KP H A+ CY RF+ N+ G ++
Sbjct: 177 CQVCCKPGHAASHCYHRFNKNYIGQNS 203
Score = 50.8 bits (120), Expect(2) = 2e-07
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Frame = -2
Query: 252 NAHPMTTRSKSGIHKPK------VFTLVVQQEPSTAQLTLSDPKWKNAVDIEMQTLYKNN 91
N H MTTRSK GI KPK V + +QEP T L +P+WK A+ E + L N
Sbjct: 735 NQHQMTTRSKMGIIKPKKPYVGAVEKTLEEQEPETTYEALENPEWKKAMIAEFKALMMNK 794
Query: 90 PWS 82
W+
Sbjct: 795 TWT 797
Score = 35.4 bits (80), Expect(2) = 2e-07
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -1
Query: 82 LVPFDDTLNLIEHKWVFRIKYNPDGSI 2
LVP+ N+I+ KWVF+ KY DG+I
Sbjct: 798 LVPYQGQKNIIDCKWVFKTKYKADGTI 824
>ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178344 [Citrus sinensis]
Length = 877
Score = 275 bits (702), Expect = 2e-75
Identities = 128/229 (55%), Positives = 165/229 (72%), Gaps = 2/229 (0%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
+LLH D+WGPA I SSQGY YY+ +DD+TRYTWIFPL TKS+ L F+ F+ MIE
Sbjct: 517 ELLHADLWGPAPITSSQGYSYYLSILDDYTRYTWIFPLTTKSKTLSAFIDFKNMIENCLN 576
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
+I+ +Q+DWG E++ VS+L GI FRH CP+ H QN K+ERKH HIVE GL LA
Sbjct: 577 LRIKCLQTDWGG--EFRPFVSYLSEQGIQFRHPCPYIHHQNRKIERKHRHIVETGLTLLA 634
Query: 814 QASIPSLY*WDTFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLRP 635
QA +P + W+ FH A Y INR+P+PIL+N SPF+ LF PDYT +K F C+C+PYLRP
Sbjct: 635 QAHLPLKFWWNAFHTATYLINRLPTPILNNKSPFEKLFHKLPDYTMMKVFGCSCYPYLRP 694
Query: 634 YYSHKLQFKSTKCI--GYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPF 494
Y HKLQF+S +C+ GYS HKGY+CL + R+YI+ V+F+E+ FPF
Sbjct: 695 YNHHKLQFRSERCVFLGYSSLHKGYQCLHLSGRVYISNHVTFDESFFPF 743
>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
Length = 2203
Score = 244 bits (624), Expect(2) = 3e-75
Identities = 113/210 (53%), Positives = 149/210 (70%), Gaps = 2/210 (0%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
+L+ +DVW PA S GYKYY+ FVD FT YTWI+P KS+ L+F A+++R FP
Sbjct: 503 ELVFSDVWEPAHTTSCDGYKYYIAFVDAFTNYTWIYPRQQKSQATSIVLQFIALVDRKFP 562
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
K++ +Q+DWG E+ L S LQ+ GI FRH CPH H QNGKVERKH IVE+GL LA
Sbjct: 563 TKLKCLQTDWGG--EFHPLQSLLQKKGILFRHPCPHVHQQNGKVERKHRSIVEIGLTLLA 620
Query: 814 QASIPSLY*WDTFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLRP 635
++ +P + W F A Y +NR+P+P+L +P++LLF S PD+ FLKTF C C+PYLRP
Sbjct: 621 KSQLPFTFWWHAFSTATYLLNRLPTPVLHCKTPYELLFKSSPDFLFLKTFGCACYPYLRP 680
Query: 634 YYSHKLQFKSTKC--IGYSLDHKGYKCLSP 551
Y +HKL+++ST+C IGYSL HKGY C+SP
Sbjct: 681 YKNHKLEYQSTQCTFIGYSLSHKGYLCVSP 710
Score = 68.6 bits (166), Expect(2) = 3e-75
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 24/220 (10%)
Frame = -3
Query: 1868 MLAVNFSGGSNWFMDSSATHHVTSHHQNIDIRADYKDKDKLVVGNGSNLSISHVGSTLIP 1689
++A + + ++WF+DS ATHH+T+ +D+ Y +VVGNG L IS VG T P
Sbjct: 253 IVAPDLNSNTSWFVDSGATHHMTTDSNTLDVFDHYSGTGNVVVGNGQTLDISSVGHTSFP 312
Query: 1688 I--SSKSPLLHNILCVPKIQRILSLFLNSLKIT-----LYSLSSMIPFVL---------- 1560
SSKS L N+L VP+I + L ++ K T + S FV
Sbjct: 313 SRKSSKSLHLANVLHVPQITKNL---ISVAKFTQDNDVILEFDSHCCFVKDKKSREILLQ 369
Query: 1559 --LRTRLPARCCLKVLCNKVFVNW-----IFLTCHHISTLLFLMKRITLLFSVIPXXXXX 1401
L+ L KV N+ FV + +FL H++T + + ++ SV
Sbjct: 370 GNLKEGLYQLDISKVSSNRQFVGFSEDTNVFLP--HLATTPSTVNKQSVAPSV--GYSLQ 425
Query: 1400 XXXXXXXXXXXXXXXXXXXLWRNKLGHPCNAVLTTILKQL 1281
LW +LGHPCN +++ +L +L
Sbjct: 426 VNKIESTRCVEDNNTGVGHLWHQRLGHPCNKIVSLVLDRL 465
Score = 113 bits (282), Expect = 1e-21
Identities = 54/101 (53%), Positives = 76/101 (75%)
Frame = -1
Query: 2518 MLGHVSRCTTSVELWSVLETMFQLQLRARVMNLSFQLQSTKKCALSIDEYMLKMRGFADG 2339
M GHV C TS E+WSVLE +F +AR + L F LQS KK ALSI++Y+LKMR AD
Sbjct: 1 MYGHVVNCQTSAEVWSVLEKLFVSNSKARTLQLRFMLQSLKKGALSINDYVLKMRNIADM 60
Query: 2338 ILAVGQTLTDDELIIYILGGLGVEYESVVVNLTTRADPLNL 2216
+ A G+ + D++LI+YILGGLG E+E++VVN+T+R++ ++L
Sbjct: 61 LSASGKPVPDEDLILYILGGLGPEFETIVVNITSRSEAISL 101
Score = 110 bits (274), Expect = 9e-21
Identities = 71/223 (31%), Positives = 106/223 (47%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
+LLH D++GP+ S G Y VDDF+RYTW+ L KSE + F KF ++
Sbjct: 1096 ELLHMDLFGPSRTPSLGGKSYAYVIVDDFSRYTWVLFLSQKSEAFYEFSKFCNKVQNEKG 1155
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
F I I+SD GR E + + GI+ P T QNG VERK+ + EM L
Sbjct: 1156 FSITCIRSDHGREFENFDFEEYCNKHGINHNFSAPRTPQQNGVVERKNRTLQEMARTMLN 1215
Query: 814 QASIPSLY*WDTFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLRP 635
+ ++P + + + + Y +NRI + +P++L P+ ++ K F C CF
Sbjct: 1216 ENNLPKYFWAEAVNTSCYVLNRILLRPILKKTPYELWKNKKPNISYFKVFGCKCFILNTK 1275
Query: 634 YYSHKLQFKSTKCIGYSLDHKGYKCLSPTCRLYITRTVSFNEA 506
K KS +G L GY S R++ RT+ E+
Sbjct: 1276 DNLGKFDAKSD--VGIFL---GYSTSSKAFRVFNKRTMVVEES 1313
>gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 623
Score = 232 bits (592), Expect(4) = 6e-75
Identities = 117/239 (48%), Positives = 154/239 (64%), Gaps = 3/239 (1%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
+LL D+WGP ++SS GY YY+ FVD ++R+TWI+ L KSE L F +FQAM + F
Sbjct: 162 ELLFCDLWGPTPMLSSMGYHYYMSFVDAYSRFTWIYFLKNKSEALTIFKQFQAMAKLQFN 221
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
KI++ QSDWG E++ L GI R CPHTH QNG VERKH HI+EMGL L+
Sbjct: 222 HKIKSFQSDWGG--EFRPFTQILTSLGITHRLICPHTHHQNGVVERKHRHIIEMGLTLLS 279
Query: 814 QASIPSLY*WD-TFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLR 638
QA +P Y WD FH Y INR+PS + + P+Q+L+ DYTF+K F C C+P L
Sbjct: 280 QAFLPMKY-WDHVFHTTVYLINRLPSLSHNKIVPYQVLYSKDLDYTFIKVFGCACYPLLT 338
Query: 637 PYYSHKLQFKSTKCI--GYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPFPLLCANKSS 467
PY ++KL F+ST+C+ GYS HKGYKCL L+I++ V FNE FP+ L + +S
Sbjct: 339 PYNTNKLHFRSTECVFLGYSSSHKGYKCLDTNGLLFISKDVIFNEQRFPYQHLIPSTTS 397
Score = 61.2 bits (147), Expect(4) = 6e-75
Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = -2
Query: 375 SKSPVAHSNTPSINPSSVPDSPLPYPEHTSVMPHVPYSSLSNAHPMTTRSKSGIHKPKVF 196
S + VA ++T + + SS P S P TS N HPM TRSKSGI +PK+
Sbjct: 411 SSNDVASTSTSNSSSSSSPLSAHTLPPSTS-----------NVHPMQTRSKSGIVRPKLH 459
Query: 195 --TLVVQQEPSTAQLTLSDPKWKNAVDIEMQTLYKNNPW 85
L+ EP++ + LS P WK + +E L KN W
Sbjct: 460 PTLLLTTTEPTSLKQALSSPSWKTVMSLEYDALIKNQTW 498
Score = 31.6 bits (70), Expect(4) = 6e-75
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 1340 WRNKLGHPCNAVLTTILK 1287
W N+LGHPC +VL +LK
Sbjct: 105 WHNRLGHPCFSVLQNVLK 122
Score = 29.3 bits (64), Expect(4) = 6e-75
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 85 ELVPFDDTLNLIEHKWVFRIKYNPDGSI 2
+LVP LI KWV+ IK N DG+I
Sbjct: 499 KLVPLPSNRTLIGCKWVYCIKENHDGTI 526
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 233 bits (594), Expect(4) = 7e-75
Identities = 117/236 (49%), Positives = 159/236 (67%), Gaps = 3/236 (1%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
+L+++DVWGPA+ S G +YYV F+ D++++TW++ + KSEV+ F +FQA++ER F
Sbjct: 516 ELIYSDVWGPAL-TSVGGKQYYVSFIGDYSKFTWLYLIKHKSEVIQKFHEFQALVERLFN 574
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
KI A+QSDWG EY+ L S + GI CPHTH QNG ERKH HIVE+GL LA
Sbjct: 575 RKIIAMQSDWGG--EYEKLHSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLTLLA 632
Query: 814 QASIPSLY*WDTFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLRP 635
+S+P + + F A Y INR P+ +L L+P + LF PDY+ L+ F C C+P+LRP
Sbjct: 633 YSSMPLKFWDEAFQAAVYLINRTPTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRP 692
Query: 634 YYSHKLQFKSTKC--IGYSLDHKGYKCLSP-TCRLYITRTVSFNEAGFPFPLLCAN 476
Y +HKLQF+S +C +GYS HKG+KCL P T R+YI+R V F+E FPF L N
Sbjct: 693 YNTHKLQFRSKQCTFLGYSTLHKGFKCLDPSTGRVYISRDVIFDETNFPFAKLHTN 748
Score = 58.2 bits (139), Expect(4) = 7e-75
Identities = 26/79 (32%), Positives = 46/79 (58%)
Frame = -3
Query: 1862 AVNFSGGSNWFMDSSATHHVTSHHQNIDIRADYKDKDKLVVGNGSNLSISHVGSTLIPIS 1683
A ++ +NW++D+SAT HVT + +R YK +D++ +G+ + ISH+G + +
Sbjct: 310 ATSYGIDTNWYVDTSATDHVTGELDKLTVRDRYKGQDQVHTASGAGMEISHIGHSTVRTP 369
Query: 1682 SKSPLLHNILCVPKIQRIL 1626
++ L NIL VP + L
Sbjct: 370 NRDIHLRNILYVPNANKNL 388
Score = 35.0 bits (79), Expect(4) = 7e-75
Identities = 38/161 (23%), Positives = 58/161 (36%), Gaps = 8/161 (4%)
Frame = -2
Query: 1635 KNLVIISKFTKDNSVFIEFHDSLCLVKDKTSRKVLLKGAL**SLCQLDLSH--------L 1480
KNLV ++ DNS ++E + +KD ++K+L +G L L S
Sbjct: 386 KNLVSANRLVSDNSAYMELYSKYFNLKDLATKKLLFRGPCRGRLYALPSSSPHERPRPLK 445
Query: 1479 SSYINTSVSHEKNHSALQCNSSSIVSCKPVFPAALTCNIANSDVVFVA**TWTSL*CCTY 1300
++ S E+ HS L +S IV K + L C
Sbjct: 446 EAFGAIKPSFERWHSRLGHPASPIVE-KVISKNNLPC----------------------- 481
Query: 1299 NYSQTINIYADNNKHFFSDACKLGKQHNMSFLLFPQKLLHP 1177
A++NK DAC+ GK H + + HP
Sbjct: 482 --------LAESNKQSVCDACQQGKSHQLPYSRSSSMSSHP 514
Score = 27.7 bits (60), Expect(4) = 7e-75
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 2007 CQLCGKPNHLATKCYKRFDINF 1942
CQLC K H C+ R+D +F
Sbjct: 279 CQLCYKRGHTVINCWYRYDEDF 300
Score = 92.0 bits (227), Expect = 3e-15
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 6/150 (4%)
Frame = -1
Query: 2683 IRAHGFDSILLGEVSSPPQYTSDSFGSSST------NPDYLVWL*KDQFLFSWLLCSISE 2522
+R + L G +P + + G NP++ W+ DQ + +LL +++
Sbjct: 38 VRGARLEGHLTGATKTPNALITTTAGDKGEKEVTVRNPEFDDWVATDQQVLGFLLSTLAR 97
Query: 2521 SMLGHVSRCTTSVELWSVLETMFQLQLRARVMNLSFQLQSTKKCALSIDEYMLKMRGFAD 2342
+L V+ C T+ W +LE M+ RAR +N L +TKK LSI+EY+ KM+ AD
Sbjct: 98 DVLAQVATCGTAAAAWQMLEEMYSSVTRARFINTRIALSNTKKGTLSINEYVSKMKALAD 157
Query: 2341 GILAVGQTLTDDELIIYILGGLGVEYESVV 2252
+ A G+ + DD+LI YI+ GL YE V+
Sbjct: 158 EMTAAGKIVDDDDLISYIIAGLDDTYEPVI 187
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 228 bits (580), Expect(5) = 9e-75
Identities = 110/230 (47%), Positives = 153/230 (66%), Gaps = 3/230 (1%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
+L++TD+WGPA + S+ G KY++ FVDD++RYTW++ L +K + L F F+ +E F
Sbjct: 542 ELVYTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKXFKLQVENQFE 601
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
KI+ +Q D G E++S +S LQ GI R CP+ QNG+VERKH H+VE GLA LA
Sbjct: 602 AKIKCLQXD--NGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLA 659
Query: 814 QASIPSLY*WDTFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLRP 635
A +P + F A + INR+PS +L N SP+ LF PDY FL+ F C C+P++RP
Sbjct: 660 HAGLPLKFWSYAFQTATFLINRMPSKVLXNASPYFALFKRNPDYKFLRVFGCLCYPFIRP 719
Query: 634 YYSHKLQFKSTKCI--GYSLDHKGYKCL-SPTCRLYITRTVSFNEAGFPF 494
Y +HKLQ++S KC+ GYSL HKGY CL + T R+Y++ V F+E FPF
Sbjct: 720 YNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPF 769
Score = 50.4 bits (119), Expect(5) = 9e-75
Identities = 25/73 (34%), Positives = 39/73 (53%)
Frame = -3
Query: 1856 NFSGGSNWFMDSSATHHVTSHHQNIDIRADYKDKDKLVVGNGSNLSISHVGSTLIPISSK 1677
N NW++DS A+HH+T + N+ Y DK+ +GNG +L+IS+ T + +
Sbjct: 335 NNXADDNWYLDSGASHHLTQNVANLTNATPYTGADKVTIGNGKHLTISNTXFTRLFSNPH 394
Query: 1676 SPLLHNILCVPKI 1638
S L + VP I
Sbjct: 395 SFQLKKVFHVPFI 407
Score = 38.1 bits (87), Expect(5) = 9e-75
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = -2
Query: 1632 NLVIISKFTKDNSVFIEFHDSLCLVKDKTSRKVLLKGAL**SLCQLDL--SHLSSYINTS 1459
NL+ ++KF DN+ IEFH + +KD +++VL +G L L + + + ++Y+ +
Sbjct: 410 NLISVAKFCSDNNALIEFHSNGFFLKDLHTKRVLAQGKLENGLYKFPVISNKKTAYVGIT 469
Query: 1458 VSHEKNHSALQCNS 1417
N S QC++
Sbjct: 470 -----NDSTFQCSN 478
Score = 36.6 bits (83), Expect(5) = 9e-75
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -2
Query: 2007 CQLCGKPNHLATKCYKRFDINFAGYDN 1927
CQLCGK H CY RFDI F N
Sbjct: 287 CQLCGKFGHTVQVCYHRFDITFQSTQN 313
Score = 21.2 bits (43), Expect(5) = 9e-75
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 1340 WRNKLGHPCNAVLTTIL 1290
W ++LGH ++T I+
Sbjct: 486 WHHRLGHAATDIVTRIM 502
Score = 96.3 bits (238), Expect(2) = 3e-18
Identities = 48/158 (30%), Positives = 91/158 (57%)
Frame = -1
Query: 2689 NLIRAHGFDSILLGEVSSPPQYTSDSFGSSSTNPDYLVWL*KDQFLFSWLLCSISESMLG 2510
N+I A+GF+ + G P + NP ++ +D+ + SW+ S++ ++
Sbjct: 51 NVIFANGFEDFIDGTSVCPEK----ELRPGEINPAFVAXRRQDRTILSWIYSSLTPGIMA 106
Query: 2509 HVSRCTTSVELWSVLETMFQLQLRARVMNLSFQLQSTKKCALSIDEYMLKMRGFADGILA 2330
+ +S W+ LE +F RAR+M L + QSTKK ++S+ +Y++K++G AD + A
Sbjct: 107 QIIGHNSSHSAWNALEKIFSSCSRARIMQLXLEFQSTKKGSMSMIDYIMKVKGAADSLAA 166
Query: 2329 VGQTLTDDELIIYILGGLGVEYESVVVNLTTRADPLNL 2216
+G+ +++ + I+ +LGGLG +Y +VV + R D ++L
Sbjct: 167 IGEPVSEQDQIMNLLGGLGSDYNAVVTAINIREDKISL 204
Score = 26.6 bits (57), Expect(2) = 3e-18
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 2787 SSMAVLSSTG--NFSPPVLNTITIRLDRTNFLFWRT 2686
SSMA + S N+S PV +LDRTN++ WR+
Sbjct: 18 SSMASIPSYQMLNYSLPV------KLDRTNYILWRS 47
>gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 600
Score = 225 bits (573), Expect(4) = 1e-74
Identities = 117/238 (49%), Positives = 157/238 (65%), Gaps = 3/238 (1%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
+L+ DVWGPA + SS GY Y++ VD TRY WI+ L KS+V FL F+ + E+ F
Sbjct: 189 ELVFLDVWGPASLESSWGYMYFLTCVDACTRYMWIYLLHRKSDVFSHFLNFKTLAEKQFQ 248
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
++++Q+D G E++ L S LQ+ GI R CPHTH QNG VER+H H+VE+GLA L
Sbjct: 249 TLLKSVQTDGGG--EFRPLTSFLQQHGIIHRLTCPHTHHQNGIVERRHIHVVELGLAMLH 306
Query: 814 QASIPSLY*WD-TFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLR 638
AS+P + WD F A Y INR+PS + + SP+ L+ PDY FLK F C+CFP LR
Sbjct: 307 HASLPLKF-WDHGFLTATYLINRLPSSSIGHQSPYHLIHHKEPDYQFLKIFGCSCFPLLR 365
Query: 637 PYYSHKLQFKSTKC--IGYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPFPLLCANKS 470
PY HK+Q +S +C +GYS HKGYKCLS + R+YI++ V FNE+ FP+ L +KS
Sbjct: 366 PYNQHKIQPRSEECLFLGYSPTHKGYKCLSKSGRIYISKDVVFNESRFPYQDLFVSKS 423
Score = 51.2 bits (121), Expect(4) = 1e-74
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Frame = -2
Query: 351 NTPSINPSSVPD----SPLPYPEHTSVMPHVPYSSLS-----------NAHPMTTRSKSG 217
N+P + S PD P P S P S + N HPMTTRSK+G
Sbjct: 446 NSPESSTHSDPDFLHSQPAPADSQLSSFNSSPNISAASGSISETARPLNLHPMTTRSKNG 505
Query: 216 IHKPKV--FTLVVQQEPSTAQLTLSDPKWKNAVDIEMQTLYKNNPWS 82
I +P++ L+ P T + L+DP W A+ E+ L+ N+ W+
Sbjct: 506 IVQPRLNPTLLLSHVVPKTVKTALADPHWLAAMQTEITALHNNHTWT 552
Score = 45.8 bits (107), Expect(4) = 1e-74
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Frame = -2
Query: 1638 TKNLVIISKFTKDNSVFIEFHDSLCLVKDKTSRKVLLKGAL-**SLCQLDLSHLSSYINT 1462
+KNL+ +SKF KDN+V+ F+ C VK + + LL+G L L + S + + IN
Sbjct: 39 SKNLMSVSKFAKDNNVYFVFNPHSCFVKSQDLNETLLEGKLGEDGLYRFHPSLMKNEINK 98
Query: 1461 SVSHEKNHSALQCNSSSIVS--CKPVFPAA-----LTCNIANSDVVFVA**TWTSL*CCT 1303
V H+KN ++ + +S C P+ L N+D + A L C
Sbjct: 99 DV-HKKNSISVLTEPCTFLSATCTNTVPSVYRQWHLRLGHQNNDAITKA------LKICN 151
Query: 1302 YNYSQTINIYADNNKHFFSDACKLGKQHNM 1213
+ T+N +D F D+C + K H +
Sbjct: 152 I-HIPTVNKISD-----FCDSCCIAKSHRL 175
Score = 31.6 bits (70), Expect(4) = 1e-74
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 43 KWVFRIKYNPDGSI 2
KWVFR+K NPDGSI
Sbjct: 566 KWVFRVKENPDGSI 579
>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 839
Score = 247 bits (630), Expect(3) = 1e-74
Identities = 121/233 (51%), Positives = 161/233 (69%), Gaps = 3/233 (1%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
+L+++D+WGPA ++S GY+YYV FVD TR+TWIF L +K+ L F +F AM+ F
Sbjct: 209 ELIYSDLWGPAPVLSDNGYQYYVTFVDAHTRFTWIFMLKSKAHTLDVFKQFHAMVRNQFQ 268
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
I+AIQ+DWG E++S S+L + GIH R CPHTH QNG VERKH HIVE+GL LA
Sbjct: 269 LPIKAIQTDWGG--EFRSFTSYLAQHGIHHRIICPHTHHQNGVVERKHRHIVELGLTLLA 326
Query: 814 QASIPSLY*WD-TFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLR 638
QA +P ++ WD F + Y INR+PS + PF+ LF PDY FL+ F C+CFP+LR
Sbjct: 327 QAHLP-MHFWDYAFLTSVYLINRLPSSSIQQDVPFRKLFHHLPDYNFLRVFGCSCFPHLR 385
Query: 637 PYYSHKLQFKSTKCI--GYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPFPLL 485
PY KLQF+S +C+ GYS HKGYKCL+P+ R++I++ V F E FP+P L
Sbjct: 386 PYNKTKLQFRSQECVFLGYSTSHKGYKCLAPSGRVFISKDVIFCENRFPYPTL 438
Score = 52.0 bits (123), Expect(3) = 1e-74
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = -2
Query: 369 SPVAHSNTPSINPSSVPDSPLPYPEHTSVMPHVPYSSLSNAHPMTTRSKSGIHKPKV--F 196
SP+ ++PS PS SP P P ++ +P + N HPMTTR+K+GI KP++
Sbjct: 474 SPIFTDSSPS-QPSHT--SPTPNPSASTSLPTHVEAPPINLHPMTTRAKAGIVKPRLQPT 530
Query: 195 TLVVQQEPSTAQLTLSDPKWKNAVDIEMQTLYKNNPWS 82
L+ EP + L+ W A+ E L N W+
Sbjct: 531 LLLTHFEPKNTKQALASDTWLAAMKQEYNALMANGTWT 568
Score = 33.5 bits (75), Expect(3) = 1e-74
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -1
Query: 82 LVPFDDTLNLIEHKWVFRIKYNPDGSI 2
LVP I KWVFRIK NPDG++
Sbjct: 569 LVPLPSHRTAIGCKWVFRIKENPDGTV 595
Score = 53.1 bits (126), Expect(2) = 7e-13
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -2
Query: 1638 TKNLVIISKFTKDNSVFIEFHDSLCLVKDKTSRKVLLKGAL 1516
TKNL+ +S+F KDNSVF EFH + CLVK + + + LL G L
Sbjct: 80 TKNLISVSQFCKDNSVFFEFHSTFCLVKSQANSETLLHGVL 120
Score = 51.2 bits (121), Expect(2) = 7e-13
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Frame = -3
Query: 1850 SGGSNWFMDSSATHHVTSHHQNIDIRADYKDKDKLVVGNGSNL-----SISHVGSTLIPI 1686
SG + W+ DS A++HVT+ NI ++ D++V+GNG + ++H S L P
Sbjct: 6 SGANIWYPDSGASNHVTNVSHNIQQYTPFEGPDQIVIGNGQGIPINSSGVTHFSSPLNPH 65
Query: 1685 SSKSPLLHNILCVPKIQRIL 1626
S + LHN+L VP I + L
Sbjct: 66 ISLT--LHNLLYVPTITKNL 83
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 253 bits (646), Expect(3) = 3e-73
Identities = 121/236 (51%), Positives = 159/236 (67%), Gaps = 2/236 (0%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
+L+HTD+WGPA SS G++YY+HF+D ++R+TWI+ L KSE FL F++ +E
Sbjct: 564 ELIHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLG 623
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
KI+A+QSDWG EY+S +L GI R CP+TH QNG ERKH HIVE G+A LA
Sbjct: 624 HKIKAVQSDWGG--EYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLA 681
Query: 814 QASIPSLY*WDTFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLRP 635
QAS+P Y + F + Y INR+P+P+L N SP ++LF P Y+ LK F C C+P LRP
Sbjct: 682 QASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLFHQKPSYSXLKVFGCMCYPNLRP 741
Query: 634 YYSHKLQFKSTKC--IGYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPFPLLCANK 473
+ HKLQF+S C +GYSL+HKGYKCLSP + I+R V F+E FPF L + K
Sbjct: 742 FNHHKLQFRSIPCTFLGYSLNHKGYKCLSPNGNILISRDVIFDEXAFPFAQLQSQK 797
Score = 44.3 bits (103), Expect(3) = 3e-73
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = -2
Query: 363 VAHSNTPSINPSSVPDSPLPYPEHTSVMPHVPYSSLSN--AHPMTTRSKSGIHKPKVFTL 190
V S+T S S P + +V P SS +H M TRSK GI KPK +
Sbjct: 820 VLPSSTSCSTSSPTNPSIFPATSNHNVASQXPPSSAPPFPSHHMITRSKXGIFKPKAY-- 877
Query: 189 VVQQEPSTAQLTLSDPKWKNAVDIEMQTLYKNNPW 85
++ P++ L WK A+ E L +NN W
Sbjct: 878 LISTTPTSVPEALQLSHWKQAMTDEYLALLRNNTW 912
Score = 30.4 bits (67), Expect(3) = 3e-73
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 85 ELVPFDDTLNLIEHKWVFRIKYNPDGSI 2
+LVP LI KWVF++K N DG+I
Sbjct: 913 DLVPPPTDRKLIGCKWVFKVKENXDGTI 940
Score = 57.4 bits (137), Expect(3) = 1e-19
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = -3
Query: 1841 SNWFMDSSATHHVTSHHQNIDIRADYKDKDKLVVGNGSNLSISHVGSTLIP---ISSKSP 1671
+NW+ DS ATHH+T + N+ ++ + D++ VGNG L I H+G T I SK+
Sbjct: 351 NNWYPDSGATHHLTPNLNNLLTKSQFPSSDEVFVGNGKGLPIHHIGHTSFSSSFIPSKTL 410
Query: 1670 LLHNILCVPKIQRIL 1626
L +L VP+I + L
Sbjct: 411 ALKQLLHVPEITKNL 425
Score = 53.5 bits (127), Expect(3) = 1e-19
Identities = 33/89 (37%), Positives = 48/89 (53%)
Frame = -2
Query: 1638 TKNLVIISKFTKDNSVFIEFHDSLCLVKDKTSRKVLLKGAL**SLCQLDLSHLSSYINTS 1459
TKNL+ +SKF DN VF EFH + C VKD ++R VL+ G L L D + L +
Sbjct: 422 TKNLLSVSKFAADNHVFFEFHPTSCFVKDPSTRTVLMHGQLKGGLYVFDNTQLKLPL--- 478
Query: 1458 VSHEKNHSALQCNSSSIVSCKPVFPAALT 1372
H++ S+++ S +P PA+ T
Sbjct: 479 ------HNSSCFASTALPSKEPTVPASPT 501
Score = 36.6 bits (83), Expect(3) = 1e-19
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -2
Query: 2007 CQLCGKPNHLATKCYKRFDINFAGYDNIPVIPQAHQVVASIPDLNCDVGSQFF 1849
CQLCG+ H+ +CY RFD +F G P Q ++ ++ L+ + FF
Sbjct: 286 CQLCGRIGHVVMQCYYRFDQSFTG----PSQLQGNRPQGNMAHLHQQLSEXFF 334
Score = 94.0 bits (232), Expect = 7e-16
Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Frame = -1
Query: 2713 SNEFLV----LANLIRAHGFDSILLGEVSSPPQY-TSDSFGSSSTNPDYLVWL*KDQFLF 2549
++ FLV + +R H L P ++ +SD + NP + W + Q +
Sbjct: 25 NHNFLVXRKQILTTLRGHKLQHFLSETSVLPSEFLSSDDETQNHVNPKFQDWEQQXQLIM 84
Query: 2548 SWLLCSISESMLGHVSRCTTSVELWSVLETMFQLQLRARVMNLSFQLQSTKKCALSIDEY 2369
S LL SI++++L + C TS ++W LE F Q+RA+V QL +TKK LSI +Y
Sbjct: 85 SXLLASITDALLTRMVNCDTSAQVWKTLELYFATQVRAKVTQFKTQLHNTKKGDLSISDY 144
Query: 2368 MLKMRGFADGILAVGQTLTDDELIIYILGGLGVEYESVVVNLTTRADPLNLLKLIA 2201
+LK+R D + VG ++ + I I GL +YE+ ++++ +R DP + ++ A
Sbjct: 145 LLKIRNVVDLLALVGHKISVKDHIBAIFEGLPQDYETFIISVNSRLDPYTVEEIEA 200
>gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 682
Score = 238 bits (606), Expect(4) = 5e-72
Identities = 118/231 (51%), Positives = 157/231 (67%), Gaps = 3/231 (1%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
+L+++D+WGPA ++S GY+YYV VD TR+TWIF L +K+ L F +F AM++ F
Sbjct: 195 ELIYSDLWGPAPVLSDNGYQYYVTLVDAHTRFTWIFLLKSKAHTLDVFKQFHAMVQNQFQ 254
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
I+AIQ+DWG E++S S+L + GIH R CPHTH QNG VE KH HIVE+GL LA
Sbjct: 255 LPIKAIQTDWGG--EFRSFTSYLAQHGIHHRIICPHTHHQNGVVECKHRHIVELGLTLLA 312
Query: 814 QASIPSLY*WD-TFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLR 638
QA + S+ WD F + Y INR+PS + PFQ LF PDY FL+ F C+CFP+L
Sbjct: 313 QAQL-SMSFWDYAFLTSVYLINRLPSSSIQQDVPFQKLFHQLPDYNFLRVFGCSCFPHLW 371
Query: 637 PYYSHKLQFKSTKCI--GYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPFP 491
PY KLQF+S +C+ GYS HKGYKCL+P+ R++I++ V F E FP+P
Sbjct: 372 PYNKTKLQFRSQECVFLGYSTSHKGYKCLAPSGRIFISKDVIFCENHFPYP 422
Score = 51.2 bits (121), Expect(4) = 5e-72
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = -2
Query: 369 SPVAHSNTPSINPSSVPDSPLPYPEHTSVMPHVPYSSLSNAHPMTTRSKSGIHKPKV--F 196
SP +++ S PS SP P P ++ +P + N HPMTTR+K+GI KP++
Sbjct: 459 SPPISTDSSSSRPSHT--SPRPSPSSSNSLPTRVEAPPVNLHPMTTRAKAGIAKPRLQPT 516
Query: 195 TLVVQQEPSTAQLTLSDPKWKNAVDIEMQTLYKNNPWS 82
L+ EP + + L+ W A+ + L N W+
Sbjct: 517 LLLTHFEPKSTKQALASDTWLAAMKQKYDALMANGTWT 554
Score = 30.4 bits (67), Expect(4) = 5e-72
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 43 KWVFRIKYNPDGSI 2
KWVFRIK NPDG++
Sbjct: 568 KWVFRIKENPDGTV 581
Score = 25.0 bits (53), Expect(4) = 5e-72
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 1340 WRNKLGHPCNAVLTTILKQLTFMLI 1266
W ++LGH N V+ ++ K F +I
Sbjct: 138 WHSRLGHAHNDVIKSVFKLCNFPII 162
Score = 52.8 bits (125), Expect(2) = 4e-07
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -2
Query: 1638 TKNLVIISKFTKDNSVFIEFHDSLCLVKDKTSRKVLLKGAL 1516
TKNL+ +S+F KDNSVF EFH + CLVK + S + LL G +
Sbjct: 61 TKNLISVSQFCKDNSVFFEFHSTFCLVKSQDSNETLLLGVV 101
Score = 32.0 bits (71), Expect(2) = 4e-07
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = -3
Query: 1850 SGGSN-WFMDSSATHHVTSHHQNIDIRADYKDKDKLVVGNGSNLSISHVGSTLIPISSK- 1677
S G+N W+ DS A++H+ V+GNG L I+ G T K
Sbjct: 5 SPGTNIWYPDSGASNHI-------------------VIGNGQGLPINSSGVTHFSSPLKP 45
Query: 1676 --SPLLHNILCVPKIQRIL 1626
S LHN+L VP I + L
Sbjct: 46 HVSLTLHNLLYVPTITKNL 64
>gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 661
Score = 238 bits (606), Expect(4) = 5e-72
Identities = 118/231 (51%), Positives = 157/231 (67%), Gaps = 3/231 (1%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
+L+++D+WGPA ++S GY+YYV VD TR+TWIF L +K+ L F +F AM++ F
Sbjct: 174 ELIYSDLWGPAPVLSDNGYQYYVTLVDAHTRFTWIFLLKSKAHTLDVFKQFHAMVQNQFQ 233
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
I+AIQ+DWG E++S S+L + GIH R CPHTH QNG VE KH HIVE+GL LA
Sbjct: 234 LPIKAIQTDWGG--EFRSFTSYLAQHGIHHRIICPHTHHQNGVVECKHRHIVELGLTLLA 291
Query: 814 QASIPSLY*WD-TFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLR 638
QA + S+ WD F + Y INR+PS + PFQ LF PDY FL+ F C+CFP+L
Sbjct: 292 QAQL-SMSFWDYAFLTSVYLINRLPSSSIQQDVPFQKLFHQLPDYNFLRVFGCSCFPHLW 350
Query: 637 PYYSHKLQFKSTKCI--GYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPFP 491
PY KLQF+S +C+ GYS HKGYKCL+P+ R++I++ V F E FP+P
Sbjct: 351 PYNKTKLQFRSQECVFLGYSTSHKGYKCLAPSGRIFISKDVIFCENHFPYP 401
Score = 51.2 bits (121), Expect(4) = 5e-72
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = -2
Query: 369 SPVAHSNTPSINPSSVPDSPLPYPEHTSVMPHVPYSSLSNAHPMTTRSKSGIHKPKV--F 196
SP +++ S PS SP P P ++ +P + N HPMTTR+K+GI KP++
Sbjct: 438 SPPISTDSSSSRPSHT--SPRPSPSSSNSLPTRVEAPPVNLHPMTTRAKAGIAKPRLQPT 495
Query: 195 TLVVQQEPSTAQLTLSDPKWKNAVDIEMQTLYKNNPWS 82
L+ EP + + L+ W A+ + L N W+
Sbjct: 496 LLLTHFEPKSTKQALASDTWLAAMKQKYDALMANGTWT 533
Score = 30.4 bits (67), Expect(4) = 5e-72
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 43 KWVFRIKYNPDGSI 2
KWVFRIK NPDG++
Sbjct: 547 KWVFRIKENPDGTV 560
Score = 25.0 bits (53), Expect(4) = 5e-72
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 1340 WRNKLGHPCNAVLTTILKQLTFMLI 1266
W ++LGH N V+ ++ K F +I
Sbjct: 117 WHSRLGHAHNDVIKSVFKLCNFPII 141
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 231 bits (589), Expect(3) = 3e-71
Identities = 121/236 (51%), Positives = 155/236 (65%), Gaps = 3/236 (1%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
+L+ +DVWGPA S KYYV F+DD++++TWI+ L KSEV F +FQ+++ER F
Sbjct: 514 ELVFSDVWGPAP-QSVGNNKYYVSFIDDYSKFTWIYLLKYKSEVFDKFHEFQSLVERLFN 572
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
KI A+Q+DWG EY+ L S + GI CPHTH QNG ERKH HIVE+GLA LA
Sbjct: 573 RKIVAMQTDWGG--EYQKLHSFFNKVGITHHVSCPHTHQQNGSAERKHRHIVEVGLALLA 630
Query: 814 QASIPSLY*WDTFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLRP 635
+S+P + + F A Y INR PS +L ++SP + L G PDY L+ F C C+P LRP
Sbjct: 631 YSSMPLKFWGEAFLSAVYLINRTPSRVLHDVSPLERLLGHKPDYNALRVFGCACWPNLRP 690
Query: 634 YYSHKLQFKSTKC--IGYSLDHKGYKCLSP-TCRLYITRTVSFNEAGFPFPLLCAN 476
Y HKLQF+ST C +GYS HKG+KCL P T R+YI+R V F+E FPF L N
Sbjct: 691 YNKHKLQFRSTTCTFLGYSTLHKGFKCLDPSTGRVYISRDVVFDETQFPFTKLHPN 746
Score = 60.8 bits (146), Expect(3) = 3e-71
Identities = 42/202 (20%), Positives = 82/202 (40%)
Frame = -3
Query: 1862 AVNFSGGSNWFMDSSATHHVTSHHQNIDIRADYKDKDKLVVGNGSNLSISHVGSTLIPIS 1683
AV++ +NW++D+ AT HVT + +R Y D++ +G+ + ISH+G++++
Sbjct: 310 AVSYGVDTNWYLDTGATDHVTGELDKLTVRDKYHGNDQVHTASGAGMEISHIGNSVVKTP 369
Query: 1682 SKSPLLHNILCVPKIQRILSLFLNSLKITLYSLSSMIPFVLLRTRLPARCCLKVLCNKVF 1503
S++ L ++L VPK + L L + F ++ R L+ C+K
Sbjct: 370 SRNLHLKDVLYVPKANKNLVSAYKLTSDNLAFIELYRKFFFIKDLAMRRTLLRGRCHKGL 429
Query: 1502 VNWIFLTCHHISTLLFLMKRITLLFSVIPXXXXXXXXXXXXXXXXXXXXXXXXLWRNKLG 1323
+ HH ++ ++ V W ++LG
Sbjct: 430 YALPSPSSHH--------HQVKQVYGV--------------------TKPSFERWHSRLG 461
Query: 1322 HPCNAVLTTILKQLTFMLIIIS 1257
HP V+ ++K + +S
Sbjct: 462 HPSYTVVEKVIKSQNLPCLDVS 483
Score = 29.3 bits (64), Expect(3) = 3e-71
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 2007 CQLCGKPNHLATKCYKRFDINF 1942
CQLC K H C+ R+D NF
Sbjct: 279 CQLCYKRGHTVCDCWYRYDENF 300
Score = 99.0 bits (245), Expect = 2e-17
Identities = 48/127 (37%), Positives = 78/127 (61%)
Frame = -1
Query: 2596 TNPDYLVWL*KDQFLFSWLLCSISESMLGHVSRCTTSVELWSVLETMFQLQLRARVMNLS 2417
+NP+Y W+ DQ + ++LL S+++ +L V+ C T+ WS+++ MF RAR +N
Sbjct: 70 SNPEYEEWVATDQQVLAYLLSSMTKDLLVQVATCRTAASAWSMIQGMFGSMTRARTINTR 129
Query: 2416 FQLQSTKKCALSIDEYMLKMRGFADGILAVGQTLTDDELIIYILGGLGVEYESVVVNLTT 2237
L + +K ++I Y+ KMR AD ++AVG+ + DDELI YI GL E+E V+ +
Sbjct: 130 LSLSTLQKGDMNITTYVGKMRALADDLMAVGKPVDDDELIGYIFAGLDDEFEPVISTIVG 189
Query: 2236 RADPLNL 2216
R DP+ +
Sbjct: 190 RPDPVTI 196
Score = 52.8 bits (125), Expect(2) = 2e-06
Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 29/124 (23%)
Frame = -2
Query: 369 SPVAHSNTPSINPSSVPDSPLPYPEHTSVMPHVPYSSLSNA----------HPMTT---- 232
SP S++ + +P+S P + P+P+ + P S S HP TT
Sbjct: 829 SPFGESDSATASPASAPVNSAPHPDAAASGSSAPRGSTSQGGTPSVAIDDPHPATTVTGQ 888
Query: 231 -------RSKSGIHKPKVFT--------LVVQQEPSTAQLTLSDPKWKNAVDIEMQTLYK 97
R +SGI K KV+T L EP Q L + WK A+D E L K
Sbjct: 889 EAQRPRTRLQSGIRKEKVYTDGTVKWGMLTSTGEPENLQDALQNNNWKCAMDAEYMALIK 948
Query: 96 NNPW 85
NN W
Sbjct: 949 NNTW 952
Score = 30.0 bits (66), Expect(2) = 2e-06
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 82 LVPFDDTLNLIEHKWVFRIKYNPDGSI 2
LVP N+I+ KWV++IK DGS+
Sbjct: 954 LVPPQQGRNVIDCKWVYKIKRKQDGSL 980
>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 219 bits (557), Expect(4) = 6e-71
Identities = 112/230 (48%), Positives = 154/230 (66%), Gaps = 3/230 (1%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
+L+ DVWGPA + SS GY Y++ VD T+Y WI+ L KS+V F F+A+ E+ F
Sbjct: 560 ELVFLDVWGPASLESSCGYLYFLTCVDACTKYVWIYLLRRKSDVFSNFQNFKALAEKQFQ 619
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
++++Q+D G E+++L+S Q+ GI R CP+TH QNG VER+H HIVE+GLA L
Sbjct: 620 LPLKSVQTDGGG--EFRALISFFQQEGILHRLTCPYTHHQNGTVERRHRHIVELGLAMLH 677
Query: 814 QASIPSLY*WD-TFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLR 638
+++P + WD F A Y INR+PS + SP++L+ PDYTFLK F C+CFP LR
Sbjct: 678 HSTLPLNF-WDHAFLTATYLINRLPSSSVGFQSPYKLIHHKDPDYTFLKVFGCSCFPLLR 736
Query: 637 PYYSHKLQFKSTKCI--GYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPF 494
PY HKLQ +S +C+ GYS HKGYKCLS + R+YI++ V FNE FP+
Sbjct: 737 PYNQHKLQPRSEECVFLGYSPLHKGYKCLSKSGRIYISKDVIFNEGRFPY 786
Score = 55.8 bits (133), Expect(4) = 6e-71
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Frame = -2
Query: 375 SKSPVAHSNTPSINPSSVPDSPLPYPEHTSVMPHVPYSSLS--------NAHPMTTRSKS 220
S S + P+ + SS + LP S P SS S N HPM TRSK+
Sbjct: 816 SSSTLVSPTVPTNSGSSESNFSLPSMPDNSSTNSPPASSSSPSLSAPPLNIHPMITRSKN 875
Query: 219 GIHKPKV--FTLVVQQEPSTAQLTLSDPKWKNAVDIEMQTLYKNNPWS 82
GI +P++ L+ EP T + L+DP W +A+ E+ L+ N+ W+
Sbjct: 876 GILQPRLNPTLLLSNVEPKTVKSALTDPHWLSAMQAELTALHDNHTWT 923
Score = 35.0 bits (79), Expect(4) = 6e-71
Identities = 44/199 (22%), Positives = 77/199 (38%), Gaps = 10/199 (5%)
Frame = -3
Query: 1835 WFMDSSATHHVTSHHQNIDIRADYKDKDKLVVGNGSNLSISHVGSTLIPISSKSPLLHN- 1659
W DS A+HH T Q + A + + + + NG SI+ VGS + +SP+ +
Sbjct: 341 WIPDSGASHHATPDPQYLLQSAQFTGAEHIAMANGQGTSITSVGSNMF----RSPMHPST 396
Query: 1658 ILCVPKIQRILSLFLNSLKITLYSLSSMIPFVLLRTRLPARCCLK-------VLCNKVFV 1500
IL + + + SL N + ++ ++ + + FV P C +K +L +
Sbjct: 397 ILSLKDLLLVPSLTKNLISVSKFAKDNNVYFVFH----PHSCFVKSQDLNETLLEGHLGE 452
Query: 1499 NWIFLTCHHISTLLFLMKRI--TLLFSVIPXXXXXXXXXXXXXXXXXXXXXXXXLWRNKL 1326
+ ++ H++T I L+FS W +L
Sbjct: 453 DGLYHFHPHLATKTSSNTNIEQNLIFS------KPDPCIFLSEKCNSVVPNTYKQWHLRL 506
Query: 1325 GHPCNAVLTTILKQLTFML 1269
GHP + LT L+ L
Sbjct: 507 GHPHHDSLTRALQTCNIRL 525
Score = 31.2 bits (69), Expect(4) = 6e-71
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 43 KWVFRIKYNPDGSI 2
KWVFR+K NPDGSI
Sbjct: 937 KWVFRLKENPDGSI 950
Score = 82.4 bits (202), Expect = 2e-12
Identities = 43/149 (28%), Positives = 77/149 (51%)
Frame = -1
Query: 2686 LIRAHGFDSILLGEVSSPPQYTSDSFGSSSTNPDYLVWL*KDQFLFSWLLCSISESMLGH 2507
+IRAH + ++ T + ++ NP+Y W KD L SWLL ++SES+
Sbjct: 10 VIRAHDLERFVVNPKIPLKFLTPEDRDANLVNPEYTAWDRKDSLLVSWLLATLSESIQAR 69
Query: 2506 VSRCTTSVELWSVLETMFQLQLRARVMNLSFQLQSTKKCALSIDEYMLKMRGFADGILAV 2327
V C S ++W ++ FQ + + L +L++ KK S +Y+L++ + + ++
Sbjct: 70 VVSCRHSYQIWDLVFQHFQSLTKIKATQLRLELRTIKKGTRSCSDYLLRISTIVETLASI 129
Query: 2326 GQTLTDDELIIYILGGLGVEYESVVVNLT 2240
G ++ E ILGGL EY+S++ +T
Sbjct: 130 GSPISPREHAECILGGLPPEYDSLISTVT 158
>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 537
Score = 238 bits (607), Expect(4) = 2e-70
Identities = 119/233 (51%), Positives = 157/233 (67%), Gaps = 3/233 (1%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
+L+++D+W PA I S GY+YYV FVD TR+ WIF +K+ L F +F AMI+ F
Sbjct: 98 ELIYSDLWRPAPITSDNGYQYYVTFVDAHTRFIWIFLFKSKAHTLDVFKQFHAMIQNQFQ 157
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
I+AIQ+DWG E++S S+L + GI R CPHTH QNG VERKH HIVE+GL LA
Sbjct: 158 LPIKAIQTDWGG--EFRSFTSYLAQNGIQHRLICPHTHHQNGIVERKHRHIVELGLTMLA 215
Query: 814 QASIPSLY*WD-TFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLR 638
QA +P + WD F + Y INR+PS + + PF+ LF PDY FL+ F C+CFP+LR
Sbjct: 216 QAHLPMQF-WDHAFLTSVYLINRLPSSSIQHDVPFRKLFHQLPDYNFLRIFGCSCFPHLR 274
Query: 637 PYYSHKLQFKSTKCI--GYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPFPLL 485
PY +KLQ +S +C+ GYS HKGYKCL+PT R++I++ V F E FP+P L
Sbjct: 275 PYNKNKLQLRSQECVFLGYSTSHKGYKCLAPTGRIFISKDVIFCETRFPYPSL 327
Score = 46.6 bits (109), Expect(4) = 2e-70
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Frame = -2
Query: 369 SPVAHSNT---PSINPSSVPDSPLPYPEHTSVMPHVPYSSLSNAHPMTTRSKSGIHKP-- 205
SP ++T S SSV S L TS+ H + ++N H MTTR+K+GI KP
Sbjct: 366 SPTTSNSTLSSSSATTSSVSASTLLPTSSTSLSTH-DTTPITNIHSMTTRAKAGIVKPCL 424
Query: 204 KVFTLVVQQEPSTAQLTLSDPKWKNAVDIEMQTLYKNNPWS 82
+ L+ EP + + L++ W A+ E L N W+
Sbjct: 425 QPTLLLTHTEPKSTKQALANDTWLAAMKQEYNALLNNGTWT 465
Score = 27.7 bits (60), Expect(4) = 2e-70
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 82 LVPFDDTLNLIEHKWVFRIKYNPDGSI 2
LV I KWVFRIK N DG++
Sbjct: 466 LVSLPPNKTAIGCKWVFRIKENSDGTV 492
Score = 26.6 bits (57), Expect(4) = 2e-70
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -3
Query: 1340 WRNKLGHPCNAVLTTILKQLTFMLI--IISTFLVMHAN*ENNTTCLSFCSHKNFYTLS 1173
W ++LGHP N V+ ++ + F +I +S F T C SHK TLS
Sbjct: 41 WHSRLGHPHNDVMKSMFRLCNFPIINKTVSDFC---------TPCRLGKSHKLPSTLS 89
>gb|KYP50090.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 889
Score = 210 bits (534), Expect(4) = 6e-70
Identities = 112/229 (48%), Positives = 141/229 (61%), Gaps = 3/229 (1%)
Frame = -1
Query: 1171 LLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FPF 992
L+ TD+WGP+ I S GY YY +D F++YTWI+ FQ F
Sbjct: 237 LIFTDLWGPSHITSFSGYIYYDALIDAFSKYTWIY--------------FQQ-----FNT 277
Query: 991 KIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLAQ 812
KI+++QS+WG EYK L GI R CPHTH QNG VERKH +IVE+G L
Sbjct: 278 KIKSVQSNWGG--EYKDFTLFLATNGIEHRLICPHTHHQNGVVERKHRNIVEIGFTLLHH 335
Query: 811 ASIPSLY*WD-TFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLRP 635
AS+P + WD +F A Y INR+PS L+ PF +LF PDY FL+TF C CFP+LRP
Sbjct: 336 ASLPLQF-WDFSFTTAVYLINRLPSAALNFDVPFTVLFNKSPDYKFLRTFGCACFPFLRP 394
Query: 634 YYSHKLQFKSTKCI--GYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPF 494
Y SHKL F+S +C+ GYS HKGYKCLS + R+YI++ V FNE FP+
Sbjct: 395 YASHKLHFRSQECVFLGYSNSHKGYKCLSSSSRIYISKDVIFNEHRFPY 443
Score = 52.4 bits (124), Expect(4) = 6e-70
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Frame = -2
Query: 1638 TKNLVIISKFTKDNSVFIEFHDSLCLVKDKTSRKVLLKGAL**SLCQLDLSHLSSYINTS 1459
TKNL+ + KF KDN VF EFH + CLVK + + +VLL+G + + L S+ N
Sbjct: 83 TKNLLSVGKFAKDNCVFFEFHANHCLVKSQETNEVLLQGI-------VGANGLYSFPNLK 135
Query: 1458 VSHEKNHSALQCNSSSIVSCKPVFPAALTCN---IANSDV 1348
+ ++ SAL +S+ I S V +A+ N I +SDV
Sbjct: 136 L---QSPSALVSSSAKIPSQSAVSTSAVLDNFNLIKSSDV 172
Score = 50.1 bits (118), Expect(4) = 6e-70
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = -3
Query: 1850 SGGSNWFMDSSATHHVTSHHQNIDIRADYKDKDKLVVGNGSNLSISHVGSTLI--PISSK 1677
S S+W DS A+ HVT QNI + D++ +GNG L I+ GS+ PI+S+
Sbjct: 9 SSNSSWIPDSGASFHVTGEPQNIHQLEHFDGPDQIFIGNGQGLQINGFGSSFFVSPINSQ 68
Query: 1676 SPL-LHNILCVPKIQRIL 1626
L+N+L VP I + L
Sbjct: 69 FKFQLNNLLHVPLITKNL 86
Score = 25.0 bits (53), Expect(4) = 6e-70
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = -3
Query: 1340 WRNKLGHPCNAVLTTILKQLTFMLIIISTFLVMHAN*ENNTTCLSFCS 1197
W +LGHP + VL +L Q + +NT FCS
Sbjct: 179 WHTRLGHPNSHVLKLVLTQCNLL--------------PSNTYVTEFCS 212
Score = 55.1 bits (131), Expect(2) = 7e-07
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = -2
Query: 354 SNTPSINPSSVPDSPLPYPEHTSVMPHVPYSSLSNAHPMTTRSKSGIHKPKVF--TLVVQ 181
S++ +++PSS S HTS N HPM TRSK G H P++ +
Sbjct: 499 SSSQNVSPSSHESSSHNVSSHTSSTDTESIPRTINNHPMQTRSKFGFHNPRLHPSLFLAH 558
Query: 180 QEPSTAQLTLSDPKWKNAVDIEMQTLYKNNPW 85
EP + L+DP W +A+ E L N+ W
Sbjct: 559 SEPKNVKQALADPNWFSAMQQEYNALMLNHTW 590
Score = 28.9 bits (63), Expect(2) = 7e-07
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 85 ELVPFDDTLNLIEHKWVFRIKYNPDGSI 2
+LV + KWVFR+K N DGSI
Sbjct: 591 DLVSLPSDRKAVGCKWVFRVKENVDGSI 618
>gb|KYP59043.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 426
Score = 239 bits (611), Expect = 7e-67
Identities = 115/229 (50%), Positives = 152/229 (66%), Gaps = 2/229 (0%)
Frame = -1
Query: 1174 QLLHTDVWGPAIIVSSQGYKYYVHFVDDFTRYTWIFPL*TKSEVLHFFLKFQAMIER*FP 995
QL+ +D+WGP+ + SS G +YY+ F+D F++Y+WIF L TKS+ F KF+ +E
Sbjct: 21 QLVFSDIWGPSPVASSSGARYYIIFIDAFSKYSWIFLLHTKSQAFDAFNKFKTNVELQLG 80
Query: 994 FKIQAIQSDWGRGVEYKSLVSHLQRFGIHFRHHCPHTHPQNGKVERKHEHIVEMGLAFLA 815
++++AIQ+D + EY +L GI R CPHTH QNG+ ERKH HI E L LA
Sbjct: 81 YRLKAIQTDNAK--EYLKFTKYLTENGIQHRLSCPHTHEQNGRPERKHRHITETSLTLLA 138
Query: 814 QASIPSLY*WDTFHKAAYTINRIPSPILSNLSPFQLLFGSPPDYTFLKTFRCTCFPYLRP 635
AS+P + + F A IN +P+P L N+SP+Q+LF PPDY FLKTF C C+P LRP
Sbjct: 139 NASLPLHFWGEAFLTATTLINLLPTPSLQNISPYQILFHKPPDYNFLKTFGCGCYPLLRP 198
Query: 634 YYSHKLQFKSTKC--IGYSLDHKGYKCLSPTCRLYITRTVSFNEAGFPF 494
Y HKL FKS +C +GYS HKGYKCLSPT + YI+R V FNE+ FP+
Sbjct: 199 YNQHKLDFKSHQCLFLGYSNQHKGYKCLSPTGKCYISRHVKFNESFFPY 247