BLASTX nr result

ID: Rehmannia27_contig00023818 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00023818
         (519 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011101312.1| PREDICTED: U3 small nucleolar ribonucleoprot...    89   2e-17

>ref|XP_011101312.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein MPP10
           [Sesamum indicum]
          Length = 565

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 60/152 (39%), Positives = 68/152 (44%), Gaps = 6/152 (3%)
 Frame = +1

Query: 82  NGVEDKFLKIKELEEYLAEDEAREYGLXXXXXXXXXXXXTAXXXXXXXXXXXXXXXXXXX 261
           NGVED+FLKIKELE+YL EDEAREYGL            TA                   
Sbjct: 180 NGVEDEFLKIKELEKYLVEDEAREYGLKKEKKNQRKRGETADEDEEGEDEDGGEDEEDED 239

Query: 262 XXXXXXXXXXXXXXXXXXXXXXK------ARYEDFFVRKKGVQKKKPRHFRGXXXXXXXX 423
                                        ARYEDFF  K+   KKKP+HF G        
Sbjct: 240 GEEEDDELGLMGLDDDEDDDDEDGKKMETARYEDFFGGKRTGPKKKPKHFGGSDDSDMDE 299

Query: 424 XXXXXXXKNKQSLSTNEKELAKLRSQIEEMEK 519
                  + KQSLST+EKEL +LRS+IEEMEK
Sbjct: 300 PNDDNANQKKQSLSTHEKELERLRSEIEEMEK 331


Top