BLASTX nr result
ID: Rehmannia27_contig00023694
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00023694
(381 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU29187.1| hypothetical protein MIMGU_mgv1a006311mg [Erythra... 214 5e-66
ref|XP_011078791.1| PREDICTED: pentatricopeptide repeat-containi... 215 5e-65
ref|XP_012847272.1| PREDICTED: pentatricopeptide repeat-containi... 214 7e-65
emb|CDP14455.1| unnamed protein product [Coffea canephora] 179 2e-51
ref|XP_015067948.1| PREDICTED: pentatricopeptide repeat-containi... 166 2e-46
ref|XP_015161729.1| PREDICTED: pentatricopeptide repeat-containi... 166 2e-46
ref|XP_010318578.1| PREDICTED: pentatricopeptide repeat-containi... 164 1e-45
ref|XP_009611688.1| PREDICTED: pentatricopeptide repeat-containi... 163 3e-45
ref|XP_009792148.1| PREDICTED: pentatricopeptide repeat-containi... 160 9e-45
emb|CBI23347.3| unnamed protein product [Vitis vinifera] 159 9e-45
ref|XP_006371854.1| pentatricopeptide repeat-containing family p... 160 3e-44
ref|XP_006371810.1| hypothetical protein POPTR_0018s03860g, part... 157 3e-44
ref|XP_009792145.1| PREDICTED: pentatricopeptide repeat-containi... 160 3e-44
ref|XP_010646451.1| PREDICTED: pentatricopeptide repeat-containi... 159 4e-44
ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi... 159 7e-44
ref|XP_008347695.1| PREDICTED: pentatricopeptide repeat-containi... 159 1e-43
ref|XP_009377358.1| PREDICTED: pentatricopeptide repeat-containi... 158 2e-43
ref|XP_011045032.1| PREDICTED: pentatricopeptide repeat-containi... 158 3e-43
gb|KDP33430.1| hypothetical protein JCGZ_07001 [Jatropha curcas] 155 9e-43
ref|XP_012076311.1| PREDICTED: pentatricopeptide repeat-containi... 155 2e-42
>gb|EYU29187.1| hypothetical protein MIMGU_mgv1a006311mg [Erythranthe guttata]
Length = 449
Score = 214 bits (546), Expect = 5e-66
Identities = 101/126 (80%), Positives = 113/126 (89%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HGYCL+G I+LVYKSL EMFKSG LPDIFTFNT+ISKLCKSGRI EACY+FSVMSRM V
Sbjct: 178 HGYCLNGDINLVYKSLCEMFKSGHLPDIFTFNTIISKLCKSGRIHEACYVFSVMSRMDVF 237
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PDHITYKMIIQGLCI+GDV+ A FLSHMLENSF+PKPL+WNV+I+AYGK G ++ ALFV
Sbjct: 238 PDHITYKMIIQGLCINGDVVGAENFLSHMLENSFVPKPLIWNVVIDAYGKFGHIEKALFV 297
Query: 362 KNQMFE 379
KNQM E
Sbjct: 298 KNQMIE 303
Score = 70.1 bits (170), Expect = 1e-11
Identities = 37/123 (30%), Positives = 64/123 (52%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPP 184
G C++G + LS M ++ F+P +N +I K G I++A ++ + M GV P
Sbjct: 249 GLCINGDVVGAENFLSHMLENSFVPKPLIWNVVIDAYGKFGHIEKALFVKNQMIEYGVGP 308
Query: 185 DHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVK 364
+ TY +I +G + AH ML N F P + +N++I A G+V +AL ++
Sbjct: 309 NVHTYNALIHAEIRNGSIEEAHYLRKEMLMNGFFPDLVTYNLLIGAVCNLGEVSSALQLR 368
Query: 365 NQM 373
++M
Sbjct: 369 DEM 371
Score = 57.4 bits (137), Expect = 3e-07
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Frame = +2
Query: 20 GKISLVYKSL---SEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
GK + K+L ++M + G P++ T+N LI ++G I+EA Y+ M G PD
Sbjct: 286 GKFGHIEKALFVKNQMIEYGVGPNVHTYNALIHAEIRNGSIEEAHYLRKEMLMNGFFPDL 345
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA--LFVK 364
+TY ++I +C G+V A ML P + + ++ Y K +++ A LF K
Sbjct: 346 VTYNLLIGAVCNLGEVSSALQLRDEMLRRGCTPDVITYTELLRCYCKQSKMKEAEELFFK 405
Query: 365 NQ 370
Q
Sbjct: 406 VQ 407
Score = 55.8 bits (133), Expect = 1e-06
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Frame = +2
Query: 11 CLSGKISL---VYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
CL GK+ +++S+ + ++ PD+ T N LI+ LCKSG + A ++ + M G
Sbjct: 6 CLEGKLGTSLWLWRSVVQQLRT---PDVLTHNYLINALCKSGDLWRAEWLVNEMLNQGPS 62
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
P TY ++ G C++ V +A S M + P + N++++A + G + +A
Sbjct: 63 PTCATYNTLMNGYCLANKVDKALDLFSTMTKRGISPNRVSCNILVHALCQKGLLGDA 119
Score = 54.7 bits (130), Expect = 3e-06
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
C SG + ++EM G P T+NTL++ C + ++D+A +FS M++ G+ P+
Sbjct: 41 CKSGDLWRAEWLVNEMLNQGPSPTCATYNTLMNGYCLANKVDKALDLFSTMTKRGISPNR 100
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHML----ENSFIPKPLLWNVIINAYGKCGQVQNALF 358
++ +++ LC G + A L +L E + ++++ Y K G AL
Sbjct: 101 VSCNILVHALCQKGLLGDAKKLLEKILDDGSEGDNASSLITSTILMDGYFKNGNTDEALA 160
Query: 359 VKNQMFE 379
N + +
Sbjct: 161 CWNGVLQ 167
>ref|XP_011078791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830
isoform X1 [Sesamum indicum]
Length = 567
Score = 215 bits (547), Expect = 5e-65
Identities = 101/126 (80%), Positives = 113/126 (89%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CL+G I+LVYKSL EMFKSG LPDIFT+NTLIS LCKSGR +EACY+FSVMSRMGVP
Sbjct: 299 HGFCLTGDINLVYKSLCEMFKSGHLPDIFTYNTLISNLCKSGRTNEACYVFSVMSRMGVP 358
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PDHITYKMIIQGLCI+GD LRA+ FLSHMLE+S IPKPL+WNVII+AYGKCG V+ A V
Sbjct: 359 PDHITYKMIIQGLCINGDALRANHFLSHMLEDSLIPKPLIWNVIIDAYGKCGDVEKAFSV 418
Query: 362 KNQMFE 379
KNQM E
Sbjct: 419 KNQMTE 424
Score = 61.2 bits (147), Expect = 1e-08
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
+G C SG + + EM G P T+NTL+S C ++D+A +FS M+ G+
Sbjct: 156 NGLCKSGDLGRAEWLVKEMLHHGPSPTCATYNTLMSGYCLVNKVDKALDLFSTMADHGIR 215
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKP---LLWNVIINAYGKCGQVQNA 352
P+ ++ +++ LC G + A L +LE+ K + ++++ Y K G + A
Sbjct: 216 PNRVSCNILVHTLCQKGLLEDARKLLEKILEDGSDGKTSDLITSTILMDGYFKTGNMAEA 275
Query: 353 LFVKNQMFE 379
L N +F+
Sbjct: 276 LTCWNDVFQ 284
Score = 59.7 bits (143), Expect = 5e-08
Identities = 32/123 (26%), Positives = 60/123 (48%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPP 184
G C++G LS M + +P +N +I K G +++A + + M+ GV P
Sbjct: 370 GLCINGDALRANHFLSHMLEDSLIPKPLIWNVIIDAYGKCGDVEKAFSVKNQMTEFGVLP 429
Query: 185 DHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVK 364
+ TY +I +G++ +AH M+ N P + +N++I A G + +AL +
Sbjct: 430 NIYTYNALIHTQIRNGNIDKAHYLKKEMILNGIFPDLVTYNLLIGAACNFGHINSALQLH 489
Query: 365 NQM 373
++M
Sbjct: 490 DEM 492
Score = 57.8 bits (138), Expect = 2e-07
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
+G C G + + ++M + G LP+I+T+N LI ++G ID+A Y+ M G+
Sbjct: 406 YGKC--GDVEKAFSVKNQMTEFGVLPNIYTYNALIHTQIRNGNIDKAHYLKKEMILNGIF 463
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA--L 355
PD +TY ++I C G + A ML P + + ++ Y +++ A L
Sbjct: 464 PDLVTYNLLIGAACNFGHINSALQLHDEMLRRGCNPDIVTYTELLKCYCMRNKMEEAQEL 523
Query: 356 FVKNQ 370
F K Q
Sbjct: 524 FFKVQ 528
Score = 56.2 bits (134), Expect = 8e-07
Identities = 32/123 (26%), Positives = 59/123 (47%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
CL GK+ M + +PD+ T N L++ LCKSG + A ++ M G P
Sbjct: 124 CLEGKLGTALWLWRTMVQQLRIPDVLTHNYLLNGLCKSGDLGRAEWLVKEMLHHGPSPTC 183
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQ 370
TY ++ G C+ V +A S M ++ P + N++++ + G +++A + +
Sbjct: 184 ATYNTLMSGYCLVNKVDKALDLFSTMADHGIRPNRVSCNILVHTLCQKGLLEDARKLLEK 243
Query: 371 MFE 379
+ E
Sbjct: 244 ILE 246
Score = 54.3 bits (129), Expect = 4e-06
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGF---LPDIFTFNTLISKLCKSGRIDEACYIFSVMSRM 172
H C G + K L ++ + G D+ T L+ K+G + EA ++ + +
Sbjct: 226 HTLCQKGLLEDARKLLEKILEDGSDGKTSDLITSTILMDGYFKTGNMAEALTCWNDVFQR 285
Query: 173 GVPPDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
G+ D + Y ++I G C++GD+ + L M ++ +P +N +I+ K G+ A
Sbjct: 286 GIEVDVVAYNVMIHGFCLTGDINLVYKSLCEMFKSGHLPDIFTYNTLISNLCKSGRTNEA 345
Query: 353 LFVKNQM 373
+V + M
Sbjct: 346 CYVFSVM 352
>ref|XP_012847272.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830
[Erythranthe guttata]
Length = 568
Score = 214 bits (546), Expect = 7e-65
Identities = 101/126 (80%), Positives = 113/126 (89%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HGYCL+G I+LVYKSL EMFKSG LPDIFTFNT+ISKLCKSGRI EACY+FSVMSRM V
Sbjct: 297 HGYCLNGDINLVYKSLCEMFKSGHLPDIFTFNTIISKLCKSGRIHEACYVFSVMSRMDVF 356
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PDHITYKMIIQGLCI+GDV+ A FLSHMLENSF+PKPL+WNV+I+AYGK G ++ ALFV
Sbjct: 357 PDHITYKMIIQGLCINGDVVGAENFLSHMLENSFVPKPLIWNVVIDAYGKFGHIEKALFV 416
Query: 362 KNQMFE 379
KNQM E
Sbjct: 417 KNQMIE 422
Score = 70.1 bits (170), Expect = 1e-11
Identities = 37/123 (30%), Positives = 64/123 (52%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPP 184
G C++G + LS M ++ F+P +N +I K G I++A ++ + M GV P
Sbjct: 368 GLCINGDVVGAENFLSHMLENSFVPKPLIWNVVIDAYGKFGHIEKALFVKNQMIEYGVGP 427
Query: 185 DHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVK 364
+ TY +I +G + AH ML N F P + +N++I A G+V +AL ++
Sbjct: 428 NVHTYNALIHAEIRNGSIEEAHYLRKEMLMNGFFPDLVTYNLLIGAVCNLGEVSSALQLR 487
Query: 365 NQM 373
++M
Sbjct: 488 DEM 490
Score = 57.4 bits (137), Expect = 3e-07
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Frame = +2
Query: 20 GKISLVYKSL---SEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
GK + K+L ++M + G P++ T+N LI ++G I+EA Y+ M G PD
Sbjct: 405 GKFGHIEKALFVKNQMIEYGVGPNVHTYNALIHAEIRNGSIEEAHYLRKEMLMNGFFPDL 464
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA--LFVK 364
+TY ++I +C G+V A ML P + + ++ Y K +++ A LF K
Sbjct: 465 VTYNLLIGAVCNLGEVSSALQLRDEMLRRGCTPDVITYTELLRCYCKQSKMKEAEELFFK 524
Query: 365 NQ 370
Q
Sbjct: 525 VQ 526
Score = 55.8 bits (133), Expect = 1e-06
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Frame = +2
Query: 11 CLSGKISL---VYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
CL GK+ +++S+ + ++ PD+ T N LI+ LCKSG + A ++ + M G
Sbjct: 125 CLEGKLGTSLWLWRSVVQQLRT---PDVLTHNYLINALCKSGDLWRAEWLVNEMLNQGPS 181
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
P TY ++ G C++ V +A S M + P + N++++A + G + +A
Sbjct: 182 PTCATYNTLMNGYCLANKVDKALDLFSTMTKRGISPNRVSCNILVHALCQKGLLGDA 238
Score = 54.7 bits (130), Expect = 3e-06
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
C SG + ++EM G P T+NTL++ C + ++D+A +FS M++ G+ P+
Sbjct: 160 CKSGDLWRAEWLVNEMLNQGPSPTCATYNTLMNGYCLANKVDKALDLFSTMTKRGISPNR 219
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHML----ENSFIPKPLLWNVIINAYGKCGQVQNALF 358
++ +++ LC G + A L +L E + ++++ Y K G AL
Sbjct: 220 VSCNILVHALCQKGLLGDAKKLLEKILDDGSEGDNASSLITSTILMDGYFKNGNTDEALA 279
Query: 359 VKNQMFE 379
N + +
Sbjct: 280 CWNGVLQ 286
>emb|CDP14455.1| unnamed protein product [Coffea canephora]
Length = 584
Score = 179 bits (455), Expect = 2e-51
Identities = 81/124 (65%), Positives = 100/124 (80%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CL G IS YK + EMFK GFLPDIF++NTLI LCK GR EACYI++VMSRMGV
Sbjct: 316 HGFCLIGDISTAYKYVCEMFKRGFLPDIFSYNTLIGALCKEGRTTEACYIYNVMSRMGVS 375
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PD ITYKMIIQGLC GDV++A+LFL ML++S +P+PL+WNVII+ YG+CG +Q AL +
Sbjct: 376 PDQITYKMIIQGLCFHGDVIKANLFLHAMLDDSVVPQPLIWNVIIDGYGRCGNMQKALSI 435
Query: 362 KNQM 373
+ QM
Sbjct: 436 REQM 439
Score = 73.9 bits (180), Expect = 5e-13
Identities = 38/114 (33%), Positives = 61/114 (53%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
CL GK+ + M + +PDI T N LI+ CK+G +D+A ++ M G PP+
Sbjct: 141 CLEGKLGVALSLWYMMIQKSVIPDIITHNYLINGFCKTGNLDKAEWLVKEMLFRGPPPNC 200
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
TY +I+G C+ D+ RA S M + P + N+I++A K G +++A
Sbjct: 201 ATYNTLIKGYCLQKDIERALNLFSTMANSGIGPNRVTCNIIVHALCKKGLLEDA 254
Score = 58.5 bits (140), Expect = 1e-07
Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 38/161 (23%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFS--------- 157
GYCL I S M SG P+ T N ++ LCK G +++A + +
Sbjct: 209 GYCLQKDIERALNLFSTMANSGIGPNRVTCNIIVHALCKKGLLEDARKLLTEILGDTYPK 268
Query: 158 -----VMSRM------------------------GVPPDHITYKMIIQGLCISGDVLRAH 250
+ S + G+P D + Y + I G C+ GD+ A+
Sbjct: 269 DTSNLITSTILMDGSFKNGDINLALTYLDGIFCGGIPLDTVFYNVAIHGFCLIGDISTAY 328
Query: 251 LFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQM 373
++ M + F+P +N +I A K G+ A ++ N M
Sbjct: 329 KYVCEMFKRGFLPDIFSYNTLIGALCKEGRTTEACYIYNVM 369
Score = 55.5 bits (132), Expect = 1e-06
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
+G+C +G + + EM G P+ T+NTLI C I+ A +FS M+ G+
Sbjct: 173 NGFCKTGNLDKAEWLVKEMLFRGPPPNCATYNTLIKGYCLQKDIERALNLFSTMANSGIG 232
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKP----LLWNVIINAYGKCGQVQN 349
P+ +T +I+ LC G + A L+ +L +++ PK + ++++ K G +
Sbjct: 233 PNRVTCNIIVHALCKKGLLEDARKLLTEILGDTY-PKDTSNLITSTILMDGSFKNGDINL 291
Query: 350 ALFVKNQMF 376
AL + +F
Sbjct: 292 ALTYLDGIF 300
>ref|XP_015067948.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830
[Solanum pennellii] gi|970013937|ref|XP_015067949.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g24830 [Solanum pennellii]
gi|970013939|ref|XP_015067950.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g24830
[Solanum pennellii]
Length = 579
Score = 166 bits (421), Expect = 2e-46
Identities = 71/124 (57%), Positives = 97/124 (78%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CLS + YK EM K GF+PD++++NTLI LC+ G+I +ACYI+ VM+ MGV
Sbjct: 310 HGFCLSHDLGTAYKYCCEMLKLGFVPDVYSYNTLIGALCRQGKISDACYIYDVMTGMGVI 369
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PDHITY+MIIQGLCI+ ++ RA+ FL +MLENS IP+PL+WNVIIN YG+CG +Q A ++
Sbjct: 370 PDHITYRMIIQGLCINREIDRANCFLDYMLENSLIPEPLVWNVIINGYGRCGDIQKASYI 429
Query: 362 KNQM 373
+ +M
Sbjct: 430 REKM 433
Score = 64.3 bits (155), Expect = 1e-09
Identities = 33/114 (28%), Positives = 58/114 (50%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
CL G++ M ++ +PD+ T N LI+ LCK+G +++A +I M G P
Sbjct: 135 CLDGQLGAALSLWWNMIQNSIVPDVITHNYLINALCKNGELEKAEWIVRGMLYRGPSPTC 194
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
+ +I+G C+ DV A S M + +P + N++++A K G ++ A
Sbjct: 195 AAFNSLIRGYCLVNDVDNALNTFSTMANHGIVPNRVTCNILVHALCKKGLLEEA 248
Score = 58.2 bits (139), Expect = 2e-07
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 38/161 (23%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIF-SVMSRMG-- 175
GYCL + + S M G +P+ T N L+ LCK G ++EA +F ++S++
Sbjct: 203 GYCLVNDVDNALNTFSTMANHGIVPNRVTCNILVHALCKKGLLEEAKNLFHKLLSKVHNG 262
Query: 176 -----------------------------------VPPDHITYKMIIQGLCISGDVLRAH 250
+ D ++Y +++ G C+S D+ A+
Sbjct: 263 GSSNLITSTIMMDGCFKNGDTDQALAFWERMLLDRIQVDKVSYNVVVHGFCLSHDLGTAY 322
Query: 251 LFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQM 373
+ ML+ F+P +N +I A + G++ +A ++ + M
Sbjct: 323 KYCCEMLKLGFVPDVYSYNTLIGALCRQGKISDACYIYDVM 363
>ref|XP_015161729.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830
[Solanum tuberosum]
Length = 579
Score = 166 bits (420), Expect = 2e-46
Identities = 71/124 (57%), Positives = 97/124 (78%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CLS + YK EMFK GF+PD++++NTLI LC+ G+I +ACYI+ VM+ MGV
Sbjct: 310 HGFCLSHDLGTAYKYCCEMFKLGFVPDVYSYNTLIGALCRQGKISDACYIYDVMTGMGVV 369
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PD ITY+MIIQGLCI+ ++ RA+ FL +MLENS IP+PL+WNVIIN YG+CG +Q A ++
Sbjct: 370 PDQITYRMIIQGLCINREIDRANCFLDYMLENSIIPEPLVWNVIINGYGRCGDIQKASYI 429
Query: 362 KNQM 373
+ +M
Sbjct: 430 REKM 433
Score = 64.7 bits (156), Expect = 9e-10
Identities = 33/114 (28%), Positives = 58/114 (50%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
CL G++ M ++ +PD+ T N LI+ LCK+G +++A +I M G P
Sbjct: 135 CLDGQLGAALSLWWNMIQNSIVPDVITHNYLINALCKNGELEKAEWIVRGMLYRGPSPTC 194
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
+ +I+G C+ DV A S M + +P + N++++A K G ++ A
Sbjct: 195 AAFNSLIRGYCVVNDVDNALNTFSTMANHGIVPNRVTCNILVHALCKKGLLEEA 248
Score = 55.5 bits (132), Expect = 1e-06
Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 38/161 (23%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVM---SRMG 175
GYC+ + + S M G +P+ T N L+ LCK G ++EA +F + S G
Sbjct: 203 GYCVVNDVDNALNTFSTMANHGIVPNRVTCNILVHALCKKGLLEEAKNLFHKLLSKSHKG 262
Query: 176 -----------------------------------VPPDHITYKMIIQGLCISGDVLRAH 250
+ D ++Y +++ G C+S D+ A+
Sbjct: 263 GSSNLITSTIMMDGCFKNGDTDQALAFWERMLLERIQVDKVSYNVVVHGFCLSHDLGTAY 322
Query: 251 LFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQM 373
+ M + F+P +N +I A + G++ +A ++ + M
Sbjct: 323 KYCCEMFKLGFVPDVYSYNTLIGALCRQGKISDACYIYDVM 363
Score = 54.7 bits (130), Expect = 3e-06
Identities = 29/108 (26%), Positives = 48/108 (44%)
Frame = +2
Query: 17 SGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDHIT 196
SG +S E+F G PD T+N LI C G I A + M R G PD IT
Sbjct: 455 SGNLSAAQSLEKELFLYGLTPDSITYNLLIGAACNLGLIHSALQLHDKMLRKGCQPDVIT 514
Query: 197 YKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQ 340
Y +++ C+ G + A ++ + + + +++ Y + G+
Sbjct: 515 YTELLKVFCVQGMMREADKLFGKLMASGLAVDHVPFLILMKRYCRMGE 562
>ref|XP_010318578.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830
[Solanum lycopersicum] gi|723685431|ref|XP_010318579.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g24830 [Solanum lycopersicum]
Length = 579
Score = 164 bits (415), Expect = 1e-45
Identities = 70/124 (56%), Positives = 96/124 (77%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CLS + YK EM K GF+PD++++NTLI LC+ G+I +ACYI+ VM+ MGV
Sbjct: 310 HGFCLSHDLGTAYKYCCEMLKLGFVPDVYSYNTLIGALCRQGKISDACYIYDVMTGMGVK 369
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PDHITY+MIIQGLCI+ ++ RA+ FL +MLE S IP+PL+WNVIIN YG+CG +Q A ++
Sbjct: 370 PDHITYRMIIQGLCINREIDRANCFLDYMLEYSLIPEPLVWNVIINGYGRCGDIQKASYI 429
Query: 362 KNQM 373
+ +M
Sbjct: 430 REKM 433
Score = 64.3 bits (155), Expect = 1e-09
Identities = 33/114 (28%), Positives = 58/114 (50%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
CL G++ M ++ +PD+ T N LI+ LCK+G +++A +I M G P
Sbjct: 135 CLDGQLGAALSLWWNMIQNSIVPDVITHNYLINALCKNGELEKAEWIVRGMLYRGPSPTC 194
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
+ +I+G C+ DV A S M + +P + N++++A K G ++ A
Sbjct: 195 AAFNSLIRGYCLVNDVDNALNTFSTMANHGIVPNRVTCNILVHALCKKGLLEEA 248
Score = 57.4 bits (137), Expect = 3e-07
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 38/161 (23%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIF-SVMSRMG-- 175
GYCL + + S M G +P+ T N L+ LCK G ++EA +F ++S++
Sbjct: 203 GYCLVNDVDNALNTFSTMANHGIVPNRVTCNILVHALCKKGLLEEANNLFHKLLSKVHNG 262
Query: 176 -----------------------------------VPPDHITYKMIIQGLCISGDVLRAH 250
D ++Y ++I G C+S D+ A+
Sbjct: 263 GSSNLITSTIMMDGCFKNGDTDQALAFWERMLLERTQVDKVSYNVVIHGFCLSHDLGTAY 322
Query: 251 LFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQM 373
+ ML+ F+P +N +I A + G++ +A ++ + M
Sbjct: 323 KYCCEMLKLGFVPDVYSYNTLIGALCRQGKISDACYIYDVM 363
>ref|XP_009611688.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830
[Nicotiana tomentosiformis]
Length = 579
Score = 163 bits (412), Expect = 3e-45
Identities = 70/124 (56%), Positives = 97/124 (78%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CLS + + YK EM K GF+PD++++NTL+ LCK G+ +ACYI+ VM+RMGV
Sbjct: 310 HGFCLSHDVGIAYKYCCEMLKLGFVPDVYSYNTLVGALCKKGKTSDACYIYDVMTRMGVI 369
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PD ITYKMIIQGLCI+ ++ RA+ FL +MLENS IP+PL+WNVII+ YGK G +Q A ++
Sbjct: 370 PDQITYKMIIQGLCINREIDRANCFLDYMLENSIIPEPLVWNVIIDGYGKFGDIQKASYI 429
Query: 362 KNQM 373
+++M
Sbjct: 430 RDKM 433
Score = 66.2 bits (160), Expect = 2e-10
Identities = 35/114 (30%), Positives = 59/114 (51%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
CL GK+ M ++ +PD+ T N LI+ LCK+ +++A +I M G P
Sbjct: 135 CLDGKMGAALSLWFNMIQNSIVPDVITHNYLINGLCKNCELEKAEWIVRGMLYRGPSPTC 194
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
TY +I+G C+ DV +A S M + +P + N++++A K G ++ A
Sbjct: 195 ATYNSLIRGYCLMNDVDKALNTFSTMANHGILPNRVTCNILVHALCKKGLLEEA 248
Score = 63.9 bits (154), Expect = 2e-09
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 38/161 (23%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSV-------- 160
GYCL + + S M G LP+ T N L+ LCK G ++EA +F
Sbjct: 203 GYCLMNDVDKALNTFSTMANHGILPNRVTCNILVHALCKKGLLEEAKKLFHKLLSKNHNG 262
Query: 161 ------------------------------MSRMGVPPDHITYKMIIQGLCISGDVLRAH 250
M + GV D ++Y +++ G C+S DV A+
Sbjct: 263 GSSDLITSTIMMDGCFKNGDTDQALAFWERMLKEGVQVDKVSYNVVVHGFCLSHDVGIAY 322
Query: 251 LFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQM 373
+ ML+ F+P +N ++ A K G+ +A ++ + M
Sbjct: 323 KYCCEMLKLGFVPDVYSYNTLVGALCKKGKTSDACYIYDVM 363
>ref|XP_009792148.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830
isoform X2 [Nicotiana sylvestris]
Length = 487
Score = 160 bits (405), Expect = 9e-45
Identities = 67/124 (54%), Positives = 95/124 (76%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+C+S + YK EM K GFLPD++++NTL+ LCK G+ +ACYI+ VM+RMGV
Sbjct: 218 HGFCMSHDVGTAYKYCCEMLKLGFLPDVYSYNTLVGALCKKGKTSDACYIYDVMTRMGVT 277
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PD ITYKMIIQGLCI+ ++ RA FL +ML+ S IP+PL+WNVII+ YG+CG ++ A ++
Sbjct: 278 PDQITYKMIIQGLCINREIDRAGCFLEYMLQKSIIPEPLVWNVIIDGYGRCGDIEKASYI 337
Query: 362 KNQM 373
+++M
Sbjct: 338 RDKM 341
Score = 66.2 bits (160), Expect = 2e-10
Identities = 37/114 (32%), Positives = 56/114 (49%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
CL GK+ M + +PD T N LI+ LCK G +++A +I M G P
Sbjct: 43 CLDGKLGAALSLWCNMIQHSIIPDGITHNYLINGLCKKGELEKAEWIVRGMLYRGPSPTC 102
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
TY +I+G C+ V +A S M + IP + N++++A K G V+ A
Sbjct: 103 ATYNSLIRGYCLMNGVDKALNTFSTMANHGIIPSRVTCNILVHALCKKGLVEEA 156
Score = 62.4 bits (150), Expect = 5e-09
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 38/161 (23%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSV-------- 160
GYCL + + S M G +P T N L+ LCK G ++EA +F
Sbjct: 111 GYCLMNGVDKALNTFSTMANHGIIPSRVTCNILVHALCKKGLVEEAKKLFHKLLSKNHDG 170
Query: 161 ------------------------------MSRMGVPPDHITYKMIIQGLCISGDVLRAH 250
M + G+ D ++Y +++ G C+S DV A+
Sbjct: 171 GSSDLITSTIMMDGCFKNGDTDQALAFWERMLKEGIKVDKVSYNVVVHGFCMSHDVGTAY 230
Query: 251 LFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQM 373
+ ML+ F+P +N ++ A K G+ +A ++ + M
Sbjct: 231 KYCCEMLKLGFLPDVYSYNTLVGALCKKGKTSDACYIYDVM 271
>emb|CBI23347.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 159 bits (403), Expect = 9e-45
Identities = 73/124 (58%), Positives = 94/124 (75%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CL ++ Y+ EMFK G LPDIFT+NTLIS CK G +DEACYI VMS+MG
Sbjct: 210 HGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAA 269
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PD I+YKMIIQGLCI GDV+RA+ FL MLEN +P+PL+WNV+I+ +G+ G + NAL +
Sbjct: 270 PDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSI 329
Query: 362 KNQM 373
++QM
Sbjct: 330 RDQM 333
Score = 69.7 bits (169), Expect = 1e-11
Identities = 34/114 (29%), Positives = 64/114 (56%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
CL GK+ ++M + G +PD+ T N L++ LCK+G +++A + M +G P+
Sbjct: 35 CLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNC 94
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
T+ I+G C++ +V +A S M + P + +N++I+A K G +++A
Sbjct: 95 ATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDA 148
Score = 63.9 bits (154), Expect = 2e-09
Identities = 30/92 (32%), Positives = 50/92 (54%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
+G C +G + + EM + G P+ TFNT I C + +D+A Y+FS M+ G+
Sbjct: 67 NGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIG 126
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLEN 277
P+ +TY ++I LC G + A L +L++
Sbjct: 127 PNKVTYNILIHALCKKGLLKDARKLLEKILDD 158
>ref|XP_006371854.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550318031|gb|ERP49651.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 532
Score = 160 bits (404), Expect = 3e-44
Identities = 69/124 (55%), Positives = 96/124 (77%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CL+ + L Y +M K G LPD+FT+NTL+S LCKSG++DEACYI VM RMGV
Sbjct: 247 HGFCLARDMKLAYSYSCQMLKMGLLPDVFTYNTLVSSLCKSGKLDEACYIHDVMLRMGVA 306
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PD ++YK+IIQGLC+ GDV +A+ +L+ MLE S IP+PL+WN+II+ YG+CG + NA +
Sbjct: 307 PDEVSYKLIIQGLCVCGDVDKANGYLNCMLEKSMIPEPLVWNLIIDGYGRCGDICNAFAI 366
Query: 362 KNQM 373
+++M
Sbjct: 367 RDRM 370
Score = 65.1 bits (157), Expect = 6e-10
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 37/160 (23%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCK--------------------- 121
GYCL K+ S M SG P+ TFNTL+ LCK
Sbjct: 141 GYCLLDKVDKALHLFSSMANSGTKPNRVTFNTLLHALCKKDLLTEGKKLLGEILDDDEKA 200
Query: 122 ----------------SGRIDEACYIFSVMSRMGVPPDHITYKMIIQGLCISGDVLRAHL 253
SG I +A I+ M G P D I+Y ++I G C++ D+ A+
Sbjct: 201 TSNVITSTILMDCSIKSGDIVQALGIWDSMVEEGTPMDVISYNVLIHGFCLARDMKLAYS 260
Query: 254 FLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQM 373
+ ML+ +P +N ++++ K G++ A ++ + M
Sbjct: 261 YSCQMLKMGLLPDVFTYNTLVSSLCKSGKLDEACYIHDVM 300
Score = 61.2 bits (147), Expect = 1e-08
Identities = 32/107 (29%), Positives = 55/107 (51%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
CL GK+ S+M + GF+PD+ T N +++ LCK +++A ++ M G P+
Sbjct: 73 CLGGKLGPALWLRSKMIQKGFVPDVLTHNYMVNGLCKMIELEKADWLIREMLDKGPSPNC 132
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGK 331
TY I+G C+ V +A S M + P + +N +++A K
Sbjct: 133 ATYNTFIKGYCLLDKVDKALHLFSSMANSGTKPNRVTFNTLLHALCK 179
Score = 60.1 bits (144), Expect = 3e-08
Identities = 33/117 (28%), Positives = 53/117 (45%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
H G I Y +M G PD+ T+N LI +G I A ++ M R G
Sbjct: 387 HAQVKIGNILYAYFLKKDMLLKGLFPDVVTYNLLIGAAAHAGHIHYALQLYDEMLRGGCN 446
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
PD ITY +I+G C+ + A L+ +L++ + + + ++I Y K + A
Sbjct: 447 PDMITYTELIRGYCVKYNTKEAEELLAKLLKSGLLIDHVPFQILIKQYCKMKEPDRA 503
>ref|XP_006371810.1| hypothetical protein POPTR_0018s03860g, partial [Populus
trichocarpa] gi|550317983|gb|ERP49607.1| hypothetical
protein POPTR_0018s03860g, partial [Populus trichocarpa]
Length = 418
Score = 157 bits (398), Expect = 3e-44
Identities = 67/124 (54%), Positives = 96/124 (77%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CL+ ++ L Y +M K G LPD+FT+NTL+S LCKSG++DEACY+ VM RMGV
Sbjct: 160 HGFCLAREMKLAYSYSCQMLKMGLLPDVFTYNTLVSSLCKSGKLDEACYMHDVMLRMGVA 219
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PD ++YK+IIQGLC+ GDV +A+ +L+ LE S IP+PL+WN+II+ YG+CG + NA +
Sbjct: 220 PDEVSYKLIIQGLCVCGDVDKANGYLNCTLEKSMIPEPLVWNLIIDGYGRCGDIGNAFAI 279
Query: 362 KNQM 373
+++M
Sbjct: 280 RDRM 283
Score = 62.8 bits (151), Expect = 4e-09
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 37/160 (23%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCK--------------------- 121
GYCL K+ S M SG P+ TFNTL+ LCK
Sbjct: 54 GYCLLDKVDKALHLFSSMANSGTKPNRVTFNTLLHALCKKDLLTEGKKLLGEILDDGEKA 113
Query: 122 ----------------SGRIDEACYIFSVMSRMGVPPDHITYKMIIQGLCISGDVLRAHL 253
SG I +A I+ M G P D I+Y ++I G C++ ++ A+
Sbjct: 114 TSNVITSTILMDGSIKSGDIVQALGIWDSMLEEGTPMDVISYNVLIHGFCLAREMKLAYS 173
Query: 254 FLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQM 373
+ ML+ +P +N ++++ K G++ A ++ + M
Sbjct: 174 YSCQMLKMGLLPDVFTYNTLVSSLCKSGKLDEACYMHDVM 213
Score = 61.2 bits (147), Expect = 1e-08
Identities = 33/117 (28%), Positives = 53/117 (45%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
H G I Y +M G PD+ T+N LI +G I A ++ M R G
Sbjct: 300 HAQVKIGNILYAYFLKKDMLLKGLFPDVVTYNLLIGAAANAGHIHYALQLYDEMLRGGCN 359
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
PD ITY +I+G C+ + A L+ +L++ + + + ++I Y K + A
Sbjct: 360 PDMITYTELIRGYCVKYNTKEAEELLAKLLKSGLLTDHVPFQILIKQYCKMKEPDRA 416
>ref|XP_009792145.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830
isoform X1 [Nicotiana sylvestris]
gi|698491459|ref|XP_009792146.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g24830
isoform X1 [Nicotiana sylvestris]
gi|698491462|ref|XP_009792147.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g24830
isoform X1 [Nicotiana sylvestris]
Length = 579
Score = 160 bits (405), Expect = 3e-44
Identities = 67/124 (54%), Positives = 95/124 (76%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+C+S + YK EM K GFLPD++++NTL+ LCK G+ +ACYI+ VM+RMGV
Sbjct: 310 HGFCMSHDVGTAYKYCCEMLKLGFLPDVYSYNTLVGALCKKGKTSDACYIYDVMTRMGVT 369
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PD ITYKMIIQGLCI+ ++ RA FL +ML+ S IP+PL+WNVII+ YG+CG ++ A ++
Sbjct: 370 PDQITYKMIIQGLCINREIDRAGCFLEYMLQKSIIPEPLVWNVIIDGYGRCGDIEKASYI 429
Query: 362 KNQM 373
+++M
Sbjct: 430 RDKM 433
Score = 66.2 bits (160), Expect = 2e-10
Identities = 37/114 (32%), Positives = 56/114 (49%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
CL GK+ M + +PD T N LI+ LCK G +++A +I M G P
Sbjct: 135 CLDGKLGAALSLWCNMIQHSIIPDGITHNYLINGLCKKGELEKAEWIVRGMLYRGPSPTC 194
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
TY +I+G C+ V +A S M + IP + N++++A K G V+ A
Sbjct: 195 ATYNSLIRGYCLMNGVDKALNTFSTMANHGIIPSRVTCNILVHALCKKGLVEEA 248
Score = 62.4 bits (150), Expect = 5e-09
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 38/161 (23%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSV-------- 160
GYCL + + S M G +P T N L+ LCK G ++EA +F
Sbjct: 203 GYCLMNGVDKALNTFSTMANHGIIPSRVTCNILVHALCKKGLVEEAKKLFHKLLSKNHDG 262
Query: 161 ------------------------------MSRMGVPPDHITYKMIIQGLCISGDVLRAH 250
M + G+ D ++Y +++ G C+S DV A+
Sbjct: 263 GSSDLITSTIMMDGCFKNGDTDQALAFWERMLKEGIKVDKVSYNVVVHGFCMSHDVGTAY 322
Query: 251 LFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQM 373
+ ML+ F+P +N ++ A K G+ +A ++ + M
Sbjct: 323 KYCCEMLKLGFLPDVYSYNTLVGALCKKGKTSDACYIYDVM 363
>ref|XP_010646451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830
isoform X2 [Vitis vinifera]
Length = 546
Score = 159 bits (403), Expect = 4e-44
Identities = 73/124 (58%), Positives = 94/124 (75%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CL ++ Y+ EMFK G LPDIFT+NTLIS CK G +DEACYI VMS+MG
Sbjct: 283 HGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAA 342
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PD I+YKMIIQGLCI GDV+RA+ FL MLEN +P+PL+WNV+I+ +G+ G + NAL +
Sbjct: 343 PDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSI 402
Query: 362 KNQM 373
++QM
Sbjct: 403 RDQM 406
Score = 64.7 bits (156), Expect = 8e-10
Identities = 35/108 (32%), Positives = 50/108 (46%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
H G I + EM +G PD+ T+N LI C GRI A ++ M R G
Sbjct: 423 HAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYE 482
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAY 325
PD ITY +I+G CI G V+ A L+ + + + ++I Y
Sbjct: 483 PDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQILIQKY 530
Score = 59.3 bits (142), Expect = 7e-08
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +2
Query: 11 CL-SGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPD 187
CL +G + + EM + G P+ TFNT I C + +D+A Y+FS M+ G+ P+
Sbjct: 142 CLEAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPN 201
Query: 188 HITYKMIIQGLCISGDVLRAHLFLSHMLEN 277
+TY ++I LC G + A L +L++
Sbjct: 202 KVTYNILIHALCKKGLLKDARKLLEKILDD 231
Score = 55.1 bits (131), Expect = 2e-06
Identities = 32/123 (26%), Positives = 58/123 (47%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPP 184
G C+ G + + L M ++ +P+ +N +I + G + A I M G+PP
Sbjct: 354 GLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPP 413
Query: 185 DHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVK 364
+ TY +I G+++ AH ML N P + +N++I A G++ AL +
Sbjct: 414 NVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLY 473
Query: 365 NQM 373
++M
Sbjct: 474 DEM 476
>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830
isoform X1 [Vitis vinifera]
gi|731437296|ref|XP_010646448.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g24830
isoform X1 [Vitis vinifera]
gi|731437298|ref|XP_010646449.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g24830
isoform X1 [Vitis vinifera]
Length = 580
Score = 159 bits (403), Expect = 7e-44
Identities = 73/124 (58%), Positives = 94/124 (75%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CL ++ Y+ EMFK G LPDIFT+NTLIS CK G +DEACYI VMS+MG
Sbjct: 317 HGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAA 376
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PD I+YKMIIQGLCI GDV+RA+ FL MLEN +P+PL+WNV+I+ +G+ G + NAL +
Sbjct: 377 PDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSI 436
Query: 362 KNQM 373
++QM
Sbjct: 437 RDQM 440
Score = 69.7 bits (169), Expect = 2e-11
Identities = 34/114 (29%), Positives = 64/114 (56%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
CL GK+ ++M + G +PD+ T N L++ LCK+G +++A + M +G P+
Sbjct: 142 CLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNC 201
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
T+ I+G C++ +V +A S M + P + +N++I+A K G +++A
Sbjct: 202 ATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDA 255
Score = 64.7 bits (156), Expect = 9e-10
Identities = 35/108 (32%), Positives = 50/108 (46%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
H G I + EM +G PD+ T+N LI C GRI A ++ M R G
Sbjct: 457 HAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYE 516
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAY 325
PD ITY +I+G CI G V+ A L+ + + + ++I Y
Sbjct: 517 PDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQILIQKY 564
Score = 63.9 bits (154), Expect = 2e-09
Identities = 30/92 (32%), Positives = 50/92 (54%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
+G C +G + + EM + G P+ TFNT I C + +D+A Y+FS M+ G+
Sbjct: 174 NGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIG 233
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLEN 277
P+ +TY ++I LC G + A L +L++
Sbjct: 234 PNKVTYNILIHALCKKGLLKDARKLLEKILDD 265
Score = 55.1 bits (131), Expect = 2e-06
Identities = 32/123 (26%), Positives = 58/123 (47%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPP 184
G C+ G + + L M ++ +P+ +N +I + G + A I M G+PP
Sbjct: 388 GLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPP 447
Query: 185 DHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVK 364
+ TY +I G+++ AH ML N P + +N++I A G++ AL +
Sbjct: 448 NVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLY 507
Query: 365 NQM 373
++M
Sbjct: 508 DEM 510
>ref|XP_008347695.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like [Malus domestica]
Length = 564
Score = 159 bits (401), Expect = 1e-43
Identities = 74/125 (59%), Positives = 93/125 (74%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CLS ++L Y SL EM K G LP++ TFNTLIS LCK G+++EACY+ MS+MGV
Sbjct: 318 HGFCLSRDMNLAYGSLCEMIKRGLLPNVITFNTLISGLCKEGKLEEACYVHESMSKMGVT 377
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PD I+YK+IIQGLCI GDV RA+ FL MLE S +P+PL WN II+ YG+ G + AL V
Sbjct: 378 PDQISYKIIIQGLCIKGDVFRANKFLLCMLEKSMVPEPLPWNCIIDCYGRYGNLSTALSV 437
Query: 362 KNQMF 376
K+ MF
Sbjct: 438 KDHMF 442
Score = 79.3 bits (194), Expect = 6e-15
Identities = 38/123 (30%), Positives = 69/123 (56%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
C+ GK+ + +M K GF+PD+ T N L++ LCK+G +++A ++ M +G P+
Sbjct: 143 CMDGKLGTAFWLRRKMIKKGFVPDVLTHNYLLNGLCKTGDLEKADWLLREMLEIGPSPNC 202
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQ 370
TY I+G C+ DV +A S M + P + N++++A K G ++NA + N+
Sbjct: 203 ATYNTFIKGYCLLDDVDKALYLFSTMSNSGISPNRVTCNILVHALCKKGLMENAKKLLNK 262
Query: 371 MFE 379
+ +
Sbjct: 263 ILD 265
Score = 63.2 bits (152), Expect = 3e-09
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
+G C +G + L EM + G P+ T+NT I C +D+A Y+FS MS G+
Sbjct: 175 NGLCKTGDLEKADWLLREMLEIGPSPNCATYNTFIKGYCLLDDVDKALYLFSTMSNSGIS 234
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLE---NSFIPKPLLWNVIINAYGKCGQVQNA 352
P+ +T +++ LC G + A L+ +L+ + ++ ++++ Y K G A
Sbjct: 235 PNRVTCNILVHALCKKGLMENAKKLLNKILDVDNDKTASDLIISTILMDGYLKNGNTVQA 294
Query: 353 LFVKNQMFE 379
L + ++M +
Sbjct: 295 LHIWDEMVQ 303
Score = 60.1 bits (144), Expect = 4e-08
Identities = 32/92 (34%), Positives = 44/92 (47%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
H G I EM SG PD+ T+N LI CK G I A ++ M R+G
Sbjct: 458 HAQVKGGNIDRALVLKKEMLMSGLCPDVVTYNLLIGAACKLGHIYFAFRLYDEMLRIGFD 517
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLEN 277
PD TY +I+G C+ G++ A + M E+
Sbjct: 518 PDIFTYAALIRGHCMRGNMKEAEELFTKMRES 549
Score = 59.7 bits (143), Expect = 5e-08
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Frame = +2
Query: 20 GKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDHITY 199
G +S MF SG P+++T+N LI K G ID A + M G+ PD +TY
Sbjct: 429 GNLSTALSVKDHMFASGVQPNVYTYNALIHAQVKGGNIDRALVLKKEMLMSGLCPDVVTY 488
Query: 200 KMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA--LFVK 364
++I C G + A ML F P + +I + G ++ A LF K
Sbjct: 489 NLLIGAACKLGHIYFAFRLYDEMLRIGFDPDIFTYAALIRGHCMRGNMKEAEELFTK 545
Score = 56.6 bits (135), Expect = 6e-07
Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 38/161 (23%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRID---------------- 136
GYCL + S M SG P+ T N L+ LCK G ++
Sbjct: 211 GYCLLDDVDKALYLFSTMSNSGISPNRVTCNILVHALCKKGLMENAKKLLNKILDVDNDK 270
Query: 137 ----------------------EACYIFSVMSRMGVPPDHITYKMIIQGLCISGDVLRAH 250
+A +I+ M +M D + Y ++I G C+S D+ A+
Sbjct: 271 TASDLIISTILMDGYLKNGNTVQALHIWDEMVQMNTQIDVVAYNVLIHGFCLSRDMNLAY 330
Query: 251 LFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQM 373
L M++ +P + +N +I+ K G+++ A +V M
Sbjct: 331 GSLCEMIKRGLLPNVITFNTLISGLCKEGKLEEACYVHESM 371
Score = 53.9 bits (128), Expect = 5e-06
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
C G I ++ EM + GF PDIFT+ LI C G + EA +F+ M G+P DH
Sbjct: 496 CKLGHIYFAFRLYDEMLRIGFDPDIFTYAALIRGHCMRGNMKEAEELFTKMRESGLPIDH 555
Query: 191 ITYKMIIQ 214
+ Y+++ +
Sbjct: 556 VPYQILFK 563
>ref|XP_009377358.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830
[Pyrus x bretschneideri]
Length = 564
Score = 158 bits (399), Expect = 2e-43
Identities = 73/124 (58%), Positives = 93/124 (75%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CLS ++L Y S EM K G LP++ TFNTLIS LCK G+++EACY+ MS+MGV
Sbjct: 318 HGFCLSRDMNLAYGSFCEMIKRGLLPNVITFNTLISGLCKEGKLEEACYVHETMSKMGVI 377
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PD I+YK+IIQGLCI GDV RA+ FL MLE S +P+PLLWN II+ YG+ G + AL V
Sbjct: 378 PDQISYKIIIQGLCIKGDVFRANKFLLCMLEKSMVPEPLLWNCIIDCYGRYGDLSTALSV 437
Query: 362 KNQM 373
K++M
Sbjct: 438 KDRM 441
Score = 80.9 bits (198), Expect = 2e-15
Identities = 38/121 (31%), Positives = 70/121 (57%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
C+ GK+ + +M K GF+PD+ T N L+++LCK+G +++A ++ M +G P+
Sbjct: 143 CMDGKLGTAFWLRRKMIKKGFVPDVSTHNYLLNRLCKTGDLEKADWLIREMLEIGPSPNC 202
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQ 370
TY I+G C+ DV +A S M+ + P + N++++A K G ++NA + N+
Sbjct: 203 ATYNTFIKGYCLIDDVDKALYLFSTMINSGISPNRVTCNILVHALCKKGLMENAKKLLNK 262
Query: 371 M 373
+
Sbjct: 263 I 263
Score = 57.4 bits (137), Expect = 3e-07
Identities = 32/92 (34%), Positives = 43/92 (46%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
H G I EM SG PD+ T+N LI CK G I A + M R+G
Sbjct: 458 HAQVKGGNIDRGLVLKKEMLMSGLCPDVVTYNLLIGAACKLGHIYFAFRLHDEMLRIGFD 517
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLEN 277
PD TY +I+G C+ G++ A + M E+
Sbjct: 518 PDIFTYAALIRGHCMRGNMKEAEELFTKMRES 549
Score = 54.7 bits (130), Expect = 3e-06
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Frame = +2
Query: 20 GKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDHITY 199
G +S M SG P+++T+N LI K G ID + M G+ PD +TY
Sbjct: 429 GDLSTALSVKDRMLASGVQPNVYTYNALIHAQVKGGNIDRGLVLKKEMLMSGLCPDVVTY 488
Query: 200 KMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA--LFVK 364
++I C G + A ML F P + +I + G ++ A LF K
Sbjct: 489 NLLIGAACKLGHIYFAFRLHDEMLRIGFDPDIFTYAALIRGHCMRGNMKEAEELFTK 545
Score = 54.7 bits (130), Expect = 3e-06
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
C G I ++ EM + GF PDIFT+ LI C G + EA +F+ M G+P DH
Sbjct: 496 CKLGHIYFAFRLHDEMLRIGFDPDIFTYAALIRGHCMRGNMKEAEELFTKMRESGLPIDH 555
Query: 191 ITYKMIIQ 214
+ Y+M+ +
Sbjct: 556 VPYQMLFK 563
Score = 53.5 bits (127), Expect = 7e-06
Identities = 37/161 (22%), Positives = 62/161 (38%), Gaps = 38/161 (23%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRID---------------- 136
GYCL + S M SG P+ T N L+ LCK G ++
Sbjct: 211 GYCLIDDVDKALYLFSTMINSGISPNRVTCNILVHALCKKGLMENAKKLLNKILGVVNDK 270
Query: 137 ----------------------EACYIFSVMSRMGVPPDHITYKMIIQGLCISGDVLRAH 250
+A I+ M +M D + Y ++I G C+S D+ A+
Sbjct: 271 TALDLITSTTLMDGYLKNGNTVQALRIWDDMVQMNTQIDVVAYNVLIHGFCLSRDMNLAY 330
Query: 251 LFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQM 373
M++ +P + +N +I+ K G+++ A +V M
Sbjct: 331 GSFCEMIKRGLLPNVITFNTLISGLCKEGKLEEACYVHETM 371
>ref|XP_011045032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830
[Populus euphratica] gi|743903371|ref|XP_011045033.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g24830 [Populus euphratica]
gi|743903373|ref|XP_011045034.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g24830
[Populus euphratica]
Length = 592
Score = 158 bits (399), Expect = 3e-43
Identities = 67/124 (54%), Positives = 95/124 (76%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CL+ + L Y +M K G LPD+FT+NTL+S LCKSG++DEACYI VM RMGV
Sbjct: 308 HGFCLARDMKLAYSYSCQMLKMGLLPDVFTYNTLVSSLCKSGKLDEACYIHDVMLRMGVA 367
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PD ++YK+IIQGLC+ GD+ +A+ +L+ LE S IP+PL+WN+II+ YG+CG + NA +
Sbjct: 368 PDEVSYKLIIQGLCVCGDIDKANGYLNCTLEKSMIPEPLVWNLIIDGYGRCGDIYNAFAI 427
Query: 362 KNQM 373
+++M
Sbjct: 428 RDRM 431
Score = 65.1 bits (157), Expect = 6e-10
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 37/160 (23%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCK--------------------- 121
GYCL K+ S M SG P+ TFNTL+ LCK
Sbjct: 202 GYCLLDKVDKALHLFSSMANSGTKPNRVTFNTLLHALCKKDLLTEGKKLLGEILDDGEKA 261
Query: 122 ----------------SGRIDEACYIFSVMSRMGVPPDHITYKMIIQGLCISGDVLRAHL 253
SG I +A I+ M G P D I+Y ++I G C++ D+ A+
Sbjct: 262 TSNVITSTILMDGSIKSGDIVQALGIWDSMLEEGTPMDVISYNVLIHGFCLARDMKLAYS 321
Query: 254 FLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQM 373
+ ML+ +P +N ++++ K G++ A ++ + M
Sbjct: 322 YSCQMLKMGLLPDVFTYNTLVSSLCKSGKLDEACYIHDVM 361
Score = 62.8 bits (151), Expect = 4e-09
Identities = 32/107 (29%), Positives = 55/107 (51%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
CL GK+ S+M + GF+PD+ T N +++ LCK +++A ++ M G P+
Sbjct: 134 CLGGKLGPALWLRSKMIQKGFVPDVLTHNYMVNGLCKMSELEKADWLIREMLDKGPSPNC 193
Query: 191 ITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGK 331
TY I+G C+ V +A S M + P + +N +++A K
Sbjct: 194 ATYNTFIKGYCLLDKVDKALHLFSSMANSGTKPNRVTFNTLLHALCK 240
Score = 60.1 bits (144), Expect = 4e-08
Identities = 33/117 (28%), Positives = 53/117 (45%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
H G I Y +M G PD+ T+N LI +G I A ++ M R G
Sbjct: 448 HAQVKIGNILYAYFLKKDMLLKGLFPDVVTYNLLIGAAANAGHIHYALQLYDEMLRGGCN 507
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
PD ITY +I+G C+ + A L+ +L++ + + + ++I Y K + A
Sbjct: 508 PDMITYTELIRGYCVKYNTKEAEDLLAKLLKSGLLIDHVPFQILIKQYCKMKEPDRA 564
Score = 53.1 bits (126), Expect = 9e-06
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Frame = +2
Query: 2 HGYCLSG--KISLVYKS---LSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMS 166
H Y ++G K+S + K+ + EM G P+ T+NT I C ++D+A ++FS M+
Sbjct: 161 HNYMVNGLCKMSELEKADWLIREMLDKGPSPNCATYNTFIKGYCLLDKVDKALHLFSSMA 220
Query: 167 RMGVPPDHITYKMIIQGLCISGDVLRAHLFLSHMLEN--SFIPKPLLWNVIINAYGKCGQ 340
G P+ +T+ ++ LC + L +L++ + ++++ K G
Sbjct: 221 NSGTKPNRVTFNTLLHALCKKDLLTEGKKLLGEILDDGEKATSNVITSTILMDGSIKSGD 280
Query: 341 VQNALFVKNQMFE 379
+ AL + + M E
Sbjct: 281 IVQALGIWDSMLE 293
>gb|KDP33430.1| hypothetical protein JCGZ_07001 [Jatropha curcas]
Length = 524
Score = 155 bits (393), Expect = 9e-43
Identities = 68/124 (54%), Positives = 91/124 (73%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CL + L Y EM K G LPD+FT+NTLIS LC++G+I EACYI VM RMGV
Sbjct: 252 HGFCLIQDLKLAYSYSCEMLKRGLLPDVFTYNTLISGLCQAGKIYEACYIHDVMLRMGVA 311
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PDHI+YKM+I GLC GDV +A+ +L+ ML+ S +P+P +WN+II +YG+CG NA +
Sbjct: 312 PDHISYKMVIHGLCTKGDVFKANEYLNFMLKKSMVPEPFVWNLIIGSYGRCGDPDNAFSI 371
Query: 362 KNQM 373
++QM
Sbjct: 372 RDQM 375
Score = 75.9 bits (185), Expect = 1e-13
Identities = 37/115 (32%), Positives = 63/115 (54%)
Frame = +2
Query: 8 YCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPD 187
+CL GK+ +M + GF+PD+ T N L++ LCK+G +++A +I M +G P+
Sbjct: 79 FCLVGKLGTALWLRRKMVQIGFVPDVLTHNYLVNGLCKTGELEKADWIIREMLEIGPSPN 138
Query: 188 HITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
TY I+G C+ DV +A S M + P + N++++A K G + +A
Sbjct: 139 CATYNTFIKGYCLRNDVDKALFLFSTMTNSGIRPNRVTLNILVHALCKSGLLDDA 193
Score = 59.3 bits (142), Expect = 6e-08
Identities = 33/108 (30%), Positives = 50/108 (46%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
H G + Y EM G D+ T+N LIS C +G+I A ++ M + G
Sbjct: 392 HAQVKVGNVVAAYYLKKEMDCHGLFLDVVTYNLLISAACNAGQISVATRFYNEMLKTGCE 451
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAY 325
PD ITY +I G C SG++ A LS + + + + ++I Y
Sbjct: 452 PDLITYTELIGGFCKSGNMKEAEELLSKLQNSGLTVDHVPFQILIKKY 499
Score = 57.0 bits (136), Expect = 4e-07
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 37/160 (23%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEA-------------- 142
GYCL + S M SG P+ T N L+ LCKSG +D+A
Sbjct: 148 GYCLRNDVDKALFLFSTMTNSGIRPNRVTLNILVHALCKSGLLDDAKKLLREIIDDNETA 207
Query: 143 -------------CY----------IFSVMSRMGVPPDHITYKMIIQGLCISGDVLRAHL 253
C I+ +S+ V D I+Y +II G C+ D+ A+
Sbjct: 208 RIDIITSTILMDGCIKNGDMTQALGIWDALSQKNV--DAISYNVIIHGFCLIQDLKLAYS 265
Query: 254 FLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQM 373
+ ML+ +P +N +I+ + G++ A ++ + M
Sbjct: 266 YSCEMLKRGLLPDVFTYNTLISGLCQAGKIYEACYIHDVM 305
Score = 57.0 bits (136), Expect = 4e-07
Identities = 25/71 (35%), Positives = 43/71 (60%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
C +G+IS+ + +EM K+G PD+ T+ LI CKSG + EA + S + G+ DH
Sbjct: 430 CNAGQISVATRFYNEMLKTGCEPDLITYTELIGGFCKSGNMKEAEELLSKLQNSGLTVDH 489
Query: 191 ITYKMIIQGLC 223
+ ++++I+ C
Sbjct: 490 VPFQILIKKYC 500
Score = 56.6 bits (135), Expect = 6e-07
Identities = 26/93 (27%), Positives = 51/93 (54%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
+G C +G++ + EM + G P+ T+NT I C +D+A ++FS M+ G+
Sbjct: 112 NGLCKTGELEKADWIIREMLEIGPSPNCATYNTFIKGYCLRNDVDKALFLFSTMTNSGIR 171
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENS 280
P+ +T +++ LC SG + A L +++++
Sbjct: 172 PNRVTLNILVHALCKSGLLDDAKKLLREIIDDN 204
Score = 55.5 bits (132), Expect = 1e-06
Identities = 29/100 (29%), Positives = 50/100 (50%)
Frame = +2
Query: 53 EMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDHITYKMIIQGLCISG 232
+M G +P++FT+N LI K G + A Y+ M G+ D +TY ++I C +G
Sbjct: 374 QMLSFGVVPNVFTYNALIHAQVKVGNVVAAYYLKKEMDCHGLFLDVVTYNLLISAACNAG 433
Query: 233 DVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
+ A F + ML+ P + + +I + K G ++ A
Sbjct: 434 QISVATRFYNEMLKTGCEPDLITYTELIGGFCKSGNMKEA 473
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/126 (26%), Positives = 56/126 (44%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG C G + + L+ M K +P+ F +N +I + G D A I M GV
Sbjct: 322 HGLCTKGDVFKANEYLNFMLKKSMVPEPFVWNLIIGSYGRCGDPDNAFSIRDQMLSFGVV 381
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
P+ TY +I G+V+ A+ M + + +N++I+A GQ+ A
Sbjct: 382 PNVFTYNALIHAQVKVGNVVAAYYLKKEMDCHGLFLDVVTYNLLISAACNAGQISVATRF 441
Query: 362 KNQMFE 379
N+M +
Sbjct: 442 YNEMLK 447
>ref|XP_012076311.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830
[Jatropha curcas]
Length = 586
Score = 155 bits (393), Expect = 2e-42
Identities = 68/124 (54%), Positives = 91/124 (73%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG+CL + L Y EM K G LPD+FT+NTLIS LC++G+I EACYI VM RMGV
Sbjct: 314 HGFCLIQDLKLAYSYSCEMLKRGLLPDVFTYNTLISGLCQAGKIYEACYIHDVMLRMGVA 373
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
PDHI+YKM+I GLC GDV +A+ +L+ ML+ S +P+P +WN+II +YG+CG NA +
Sbjct: 374 PDHISYKMVIHGLCTKGDVFKANEYLNFMLKKSMVPEPFVWNLIIGSYGRCGDPDNAFSI 433
Query: 362 KNQM 373
++QM
Sbjct: 434 RDQM 437
Score = 75.9 bits (185), Expect = 1e-13
Identities = 37/115 (32%), Positives = 63/115 (54%)
Frame = +2
Query: 8 YCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPD 187
+CL GK+ +M + GF+PD+ T N L++ LCK+G +++A +I M +G P+
Sbjct: 141 FCLVGKLGTALWLRRKMVQIGFVPDVLTHNYLVNGLCKTGELEKADWIIREMLEIGPSPN 200
Query: 188 HITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
TY I+G C+ DV +A S M + P + N++++A K G + +A
Sbjct: 201 CATYNTFIKGYCLRNDVDKALFLFSTMTNSGIRPNRVTLNILVHALCKSGLLDDA 255
Score = 59.3 bits (142), Expect = 7e-08
Identities = 33/108 (30%), Positives = 50/108 (46%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
H G + Y EM G D+ T+N LIS C +G+I A ++ M + G
Sbjct: 454 HAQVKVGNVVAAYYLKKEMDCHGLFLDVVTYNLLISAACNAGQISVATRFYNEMLKTGCE 513
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAY 325
PD ITY +I G C SG++ A LS + + + + ++I Y
Sbjct: 514 PDLITYTELIGGFCKSGNMKEAEELLSKLQNSGLTVDHVPFQILIKKY 561
Score = 57.0 bits (136), Expect = 4e-07
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 37/160 (23%)
Frame = +2
Query: 5 GYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEA-------------- 142
GYCL + S M SG P+ T N L+ LCKSG +D+A
Sbjct: 210 GYCLRNDVDKALFLFSTMTNSGIRPNRVTLNILVHALCKSGLLDDAKKLLREIIDDNETA 269
Query: 143 -------------CY----------IFSVMSRMGVPPDHITYKMIIQGLCISGDVLRAHL 253
C I+ +S+ V D I+Y +II G C+ D+ A+
Sbjct: 270 RIDIITSTILMDGCIKNGDMTQALGIWDALSQKNV--DAISYNVIIHGFCLIQDLKLAYS 327
Query: 254 FLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFVKNQM 373
+ ML+ +P +N +I+ + G++ A ++ + M
Sbjct: 328 YSCEMLKRGLLPDVFTYNTLISGLCQAGKIYEACYIHDVM 367
Score = 57.0 bits (136), Expect = 4e-07
Identities = 25/71 (35%), Positives = 43/71 (60%)
Frame = +2
Query: 11 CLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDH 190
C +G+IS+ + +EM K+G PD+ T+ LI CKSG + EA + S + G+ DH
Sbjct: 492 CNAGQISVATRFYNEMLKTGCEPDLITYTELIGGFCKSGNMKEAEELLSKLQNSGLTVDH 551
Query: 191 ITYKMIIQGLC 223
+ ++++I+ C
Sbjct: 552 VPFQILIKKYC 562
Score = 56.6 bits (135), Expect = 6e-07
Identities = 26/93 (27%), Positives = 51/93 (54%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
+G C +G++ + EM + G P+ T+NT I C +D+A ++FS M+ G+
Sbjct: 174 NGLCKTGELEKADWIIREMLEIGPSPNCATYNTFIKGYCLRNDVDKALFLFSTMTNSGIR 233
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENS 280
P+ +T +++ LC SG + A L +++++
Sbjct: 234 PNRVTLNILVHALCKSGLLDDAKKLLREIIDDN 266
Score = 55.5 bits (132), Expect = 1e-06
Identities = 29/100 (29%), Positives = 50/100 (50%)
Frame = +2
Query: 53 EMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVPPDHITYKMIIQGLCISG 232
+M G +P++FT+N LI K G + A Y+ M G+ D +TY ++I C +G
Sbjct: 436 QMLSFGVVPNVFTYNALIHAQVKVGNVVAAYYLKKEMDCHGLFLDVVTYNLLISAACNAG 495
Query: 233 DVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNA 352
+ A F + ML+ P + + +I + K G ++ A
Sbjct: 496 QISVATRFYNEMLKTGCEPDLITYTELIGGFCKSGNMKEA 535
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/126 (26%), Positives = 56/126 (44%)
Frame = +2
Query: 2 HGYCLSGKISLVYKSLSEMFKSGFLPDIFTFNTLISKLCKSGRIDEACYIFSVMSRMGVP 181
HG C G + + L+ M K +P+ F +N +I + G D A I M GV
Sbjct: 384 HGLCTKGDVFKANEYLNFMLKKSMVPEPFVWNLIIGSYGRCGDPDNAFSIRDQMLSFGVV 443
Query: 182 PDHITYKMIIQGLCISGDVLRAHLFLSHMLENSFIPKPLLWNVIINAYGKCGQVQNALFV 361
P+ TY +I G+V+ A+ M + + +N++I+A GQ+ A
Sbjct: 444 PNVFTYNALIHAQVKVGNVVAAYYLKKEMDCHGLFLDVVTYNLLISAACNAGQISVATRF 503
Query: 362 KNQMFE 379
N+M +
Sbjct: 504 YNEMLK 509