BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00023647
         (2859 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   443   e-133
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo...   428   e-129
ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177...   419   e-126
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   415   e-125
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo...   406   e-125
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   419   e-124
ref|XP_015900354.1| PREDICTED: uncharacterized mitochondrial pro...   390   e-123
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   416   e-123
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   401   e-122
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]   404   e-121
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]   396   e-121
gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposo...   410   e-121
gb|KYP68420.1| Retrovirus-related Pol polyprotein from transposo...   392   e-121
gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposo...   402   e-120
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo...   405   e-120
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]   399   e-119
gb|KYP34165.1| Copia protein [Cajanus cajan]                          382   e-119
gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposo...   381   e-118
gb|KYP68414.1| Retrovirus-related Pol polyprotein from transposo...   382   e-118
gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposo...   378   e-117

>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  443 bits (1140), Expect = e-133
 Identities = 229/495 (46%), Positives = 293/495 (59%), Gaps = 10/495 (2%)
 Frame = +1

Query: 1    FKRFDVSFVGL-----DAPPSPVAQAHLSEMSQHSPSAPQVMAATTYPTTDNSWYIDSGA 165
            + RFD SF G      + P   +A  H        P  P V   T     DN+WY DSGA
Sbjct: 300  YYRFDQSFTGPSQLQGNRPQGNMAHLHQQLSEXFFPGTPSVKPTTAEIIQDNNWYPDSGA 359

Query: 166  SAHVTSELGNLSLKSPYHGHDKLTVGNGSQLLISHTGXXXXXXXXXXXXXXXXXXXC-VP 342
            + H+T  L NL  KS +   D++ VGNG  L I H G                     VP
Sbjct: 360  THHLTPNLNNLLTKSQFPSSDEVFVGNGKGLPIHHIGHTSFSSSFIPSKTLALKQLLHVP 419

Query: 343  DITKNLLSISQFTKDNDVLIEFHDTFCLVKDKSTNQILLKGALKGGLYQLDLSHLSAPVK 522
            +ITKNLLS+S+F  DN V  EFH T C VKD ST  +L+ G LKGGLY  D + L  P+ 
Sbjct: 420  EITKNLLSVSKFAADNHVFFEFHPTSCFVKDPSTRTVLMHGQLKGGLYVFDNTQLKLPLH 479

Query: 523  XXXXXXXXXXXXKQCNVVS--TSSLDVWHQRLGHPCINTFASVMKHLHIPFSCNKLS--F 690
                        K+  V +  TS   +WH RLGHP  +  + V+   ++P   NK+    
Sbjct: 480  NSSCFASTALPSKEPTVPASPTSPFTLWHNRLGHPSSHIVSLVLNKCNLPH-LNKIPSLI 538

Query: 691  CEACKVGKLHSISFPSIQSKSVAPFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWI 870
            C  C +GK+H  SF    S    P +LI++D+WGPA+TPS  G++YY+HF+D ++RFTWI
Sbjct: 539  CSXCCMGKIHKSSFLHSTSSYTKPLELIHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWI 598

Query: 871  FPLVSKSDVYTTVLNFISMIERQFSTKIKAFQCDWGGEYRKLSSQFQSSGINFRHPCPHT 1050
            + L  KS+ +   L+F S +E Q   KIKA Q DWGGEYR  +    S+GI  R  CP+T
Sbjct: 599  YMLKHKSEAFQVFLHFKSQVELQLGHKIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYT 658

Query: 1051 HSQNGMPERKHQHIVDLGLTLLSQAQLPFKFWWDAFSTATYLINILPTPVLHNISPFQKL 1230
            H QNG+ ERKH+HIV+ G+ LL+QA LPFK+W +AF T+ YLIN LPTPVL N SP + L
Sbjct: 659  HEQNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVL 718

Query: 1231 LHRIPDYSFLKTFGCACFPYLRPYNNHKLQFRSSKCIFLGYSPQHKGYKCLHPSGRVYIA 1410
             H+ P YS LK FGC C+P LRP+N+HKLQFRS  C FLGYS  HKGYKCL P+G + I+
Sbjct: 719  FHQKPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLGYSLNHKGYKCLSPNGNILIS 778

Query: 1411 RTVAFNETDFPFSQL 1455
            R V F+E  FPF+QL
Sbjct: 779  RDVIFDEXAFPFAQL 793



 Score =  389 bits (1000), Expect = e-113
 Identities = 198/387 (51%), Positives = 264/387 (68%), Gaps = 2/387 (0%)
 Frame = +2

Query: 1703 MVTRSKNGIYKPKAFXXXXXXXXXXXXVCQALSDPGWKEAMELEFNALLKNHTWDLVPQS 1882
            M+TRSK GI+KPKA+            V +AL    WK+AM  E+ ALL+N+TWDLVP  
Sbjct: 863  MITRSKXGIFKPKAYLISTTPTS----VPEALQLSHWKQAMTDEYLALLRNNTWDLVPPP 918

Query: 1883 ADMNLISNKWVFKVKHKADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTIRIVFS 2062
             D  LI  KWVFKVK   DG++ + KARLVA+GF QI G D+ ETFSPVVKP TIRIV +
Sbjct: 919  TDRKLIGCKWVFKVKENXDGTINKYKARLVAKGFHQIAGFDFNETFSPVVKPTTIRIVLT 978

Query: 2063 LAVSRGWSIQQVDINNAFLNGSLSQDVYMVQPEGFINPEKPTHVCKLAKALYGLKQAPRA 2242
            +A++  W ++Q+D+NNAFLNG L +D++M QP+GFI+P  P +VCKL K+LYGLKQAPRA
Sbjct: 979  IALNLQWKVRQLDVNNAFLNGDLHEDIFMHQPQGFIDPVNPNYVCKLNKSLYGLKQAPRA 1038

Query: 2243 WFEKLRDFLLSLQFCVSASDNSLFYLKSEGKLTLVLVYVDDILLTGDDSESVLELIQKLH 2422
            WFEKL   L  L F  + SD SLF   +    T +LVYVDDIL+TG++ + V  +I +L+
Sbjct: 1039 WFEKLHQALGILGFSSTKSDQSLFINITPTHSTYILVYVDDILITGNNDQFVQHVITQLN 1098

Query: 2423 STFSLKHMGEVNYFLGLEAHKLPGGYLLNQSKYISDLLVKTNMVDCKPSPSPYCSGHKLS 2602
            + F+LK +G+++YFLG++      G  L+Q+KYIS+LL KT M+  K  P+P  S   LS
Sbjct: 1099 NQFALKDLGDIDYFLGIQVKHTSAGMHLSQAKYISNLLQKTKMLHVKSVPTPMVSNQSLS 1158

Query: 2603 LNDSPAFSLPSLYRSTIGSLQYLTMTRPDIAYSVHKLSQFLHAPTEHHWSACKKVLRYLK 2782
             + S  FS   LYRST+G+LQY T+TRPDI YSV+++ QF+  P   HW A K++LRYL 
Sbjct: 1159 NSGSAPFSNTQLYRSTVGALQYATITRPDITYSVNRVCQFMQDPLTAHWKAVKRILRYLA 1218

Query: 2783 GTQLLGITFQ--ASPRMNLEAFADADW 2857
            GT   G+  Q  ++  +N+  F DADW
Sbjct: 1219 GTLHHGLHLQHNSNSHLNITGFCDADW 1245


>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1165

 Score =  428 bits (1100), Expect = e-129
 Identities = 218/483 (45%), Positives = 291/483 (60%), Gaps = 1/483 (0%)
 Frame = +1

Query: 1    FKRFDVSFVGLDAPPSPVAQAHLSEMSQHSPSAPQVMAATTYPTTDNSWYIDSGASAHVT 180
            + RF+ +++G ++          SE  +          A+     D  WY DSGAS HVT
Sbjct: 191  YHRFNKNYIGQNSDEQK------SEKDKEQNYNFNAYVASPSTVEDLDWYFDSGASNHVT 244

Query: 181  SELGNLSLKSPYHGHDKLTVGNGSQLLISHTGXXXXXXXXXXXXXXXXXXXCVPDITKNL 360
             +   +   +   G   LTVGNG+ L I   G                    VP ITKNL
Sbjct: 245  YDQNKVQEVNENDGKSFLTVGNGANLKIIACGDSSLDTQQKSLNLKDILY--VPKITKNL 302

Query: 361  LSISQFTKDNDVLIEFHDTFCLVKDKSTNQILLKGALKGGLYQLDLSHLSAPVKXXXXXX 540
            LSIS+ T DND+ +EFHD  C VKDK T +ILL+G +K GLYQL     S   +      
Sbjct: 303  LSISKLTFDNDIYVEFHDVACFVKDKLTGRILLEGKIKDGLYQLPGGSTSTNKRPH---- 358

Query: 541  XXXXXXKQCNVVSTSSLDVWHQRLGHPCINTFASVMKHLHIPFS-CNKLSFCEACKVGKL 717
                       V  S  + WH++LGHP       VMK  +I  S C    FCEAC+ GK 
Sbjct: 359  -----------VFFSIKETWHRKLGHPNSKVLNEVMKLCNIEASPCENFEFCEACQFGKA 407

Query: 718  HSISFPSIQSKSVAPFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKSDV 897
            H++ F +  S +  P DL++SDVWGPA   S  G+KYYV FLD+++RFTWI+PL  KSDV
Sbjct: 408  HNLPFQNSVSCAKEPLDLVHSDVWGPAPISSVSGFKYYVLFLDDWSRFTWIYPLKQKSDV 467

Query: 898  YTTVLNFISMIERQFSTKIKAFQCDWGGEYRKLSSQFQSSGINFRHPCPHTHSQNGMPER 1077
            +   + F +++E QF+ +IK  QCD GGE++ LS     +GI  R  CP+T +QNG  ER
Sbjct: 468  FQAFIQFRNLVENQFNKRIKTLQCDGGGEFKSLSKVLIKTGIQLRESCPYTSAQNGRAER 527

Query: 1078 KHQHIVDLGLTLLSQAQLPFKFWWDAFSTATYLINILPTPVLHNISPFQKLLHRIPDYSF 1257
            KH+H+V+ GLTLL+QA++P  +WW+AFSTA +LIN LPT V+ N SP+Q+L  + PDY+ 
Sbjct: 528  KHRHVVESGLTLLAQAKMPLHYWWEAFSTAVFLINRLPTQVIKNKSPYQQLFDKNPDYTA 587

Query: 1258 LKTFGCACFPYLRPYNNHKLQFRSSKCIFLGYSPQHKGYKCLHPSGRVYIARTVAFNETD 1437
            +KTFGCAC+P L+PYN HKLQF ++KC+FLGYS  HKGYKCL+ +GR++I+R V FNE  
Sbjct: 588  MKTFGCACYPCLKPYNQHKLQFHTTKCVFLGYSGSHKGYKCLNSTGRIFISRHVVFNEHH 647

Query: 1438 FPF 1446
            FPF
Sbjct: 648  FPF 650



 Score =  386 bits (992), Expect = e-114
 Identities = 195/389 (50%), Positives = 261/389 (67%), Gaps = 4/389 (1%)
 Frame = +2

Query: 1703 MVTRSKNGIYKPK----AFXXXXXXXXXXXXVCQALSDPGWKEAMELEFNALLKNHTWDL 1870
            M TRSK GI KPK                    +AL +P WK+AM  EF AL+ N TW L
Sbjct: 739  MTTRSKMGIIKPKKPYVGAVEKTLEEQEPETTYEALENPEWKKAMIAEFKALMMNKTWTL 798

Query: 1871 VPQSADMNLISNKWVFKVKHKADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTIR 2050
            VP     N+I  KWVFK K+KADG++ER KARLVA+GFQQ  GLDY ETFSPV+K +T+R
Sbjct: 799  VPYQGQKNIIDCKWVFKTKYKADGTIERRKARLVAKGFQQTLGLDYDETFSPVIKAITVR 858

Query: 2051 IVFSLAVSRGWSIQQVDINNAFLNGSLSQDVYMVQPEGFINPEKPTHVCKLAKALYGLKQ 2230
            I+ S+AV   W I+Q+DINNAFLNG L + V+M QPEGF++  +P H+CKL KA+YGLKQ
Sbjct: 859  IILSIAVHFNWEIRQMDINNAFLNGELKETVFMRQPEGFLDKSRPQHICKLTKAIYGLKQ 918

Query: 2231 APRAWFEKLRDFLLSLQFCVSASDNSLFYLKSEGKLTLVLVYVDDILLTGDDSESVLELI 2410
            APR+W+++LR+ LL   F  + SD+SLF L S+  +T +L+YVDDI++TG  S  +   I
Sbjct: 919  APRSWYDRLRNALLKWGFKNTRSDSSLFVLMSKAHITFLLIYVDDIIITGSSSSFLSSFI 978

Query: 2411 QKLHSTFSLKHMGEVNYFLGLEAHKLPGGYLLNQSKYISDLLVKTNMVDCKPSPSPYCSG 2590
            ++L+  F+LK +G ++YFLG+EA +   G  L Q+KY+ DLL K N+      P+P  +G
Sbjct: 979  KQLNIMFALKDLGSLHYFLGVEACRDASGLYLKQTKYVLDLLKKFNLEHVSSCPTPMVTG 1038

Query: 2591 HKLSLNDSPAFSLPSLYRSTIGSLQYLTMTRPDIAYSVHKLSQFLHAPTEHHWSACKKVL 2770
              LS  ++     P+LYR  IG LQYLT TRPDIAYSV++LSQ++ APT  HW + K+V 
Sbjct: 1039 RSLS-EEAELMKNPTLYRRAIGVLQYLTNTRPDIAYSVNRLSQYMQAPTTIHWQSVKRVF 1097

Query: 2771 RYLKGTQLLGITFQASPRMNLEAFADADW 2857
            RYLKGT    +  + S  +++  F+DADW
Sbjct: 1098 RYLKGTMNHCLHIKPSVDLDITGFSDADW 1126


>ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177515 [Citrus sinensis]
          Length = 1143

 Score =  419 bits (1078), Expect = e-126
 Identities = 213/484 (44%), Positives = 287/484 (59%), Gaps = 43/484 (8%)
 Frame = +1

Query: 133  TDNSWYIDSGASAHVTSELGNLSLKSPYHGHDKLTVGNGSQLLISHTGXXXXXXXXXXXX 312
            +D +WY+DSGA+ H+T+++ N+ +   + G  KL VGNG+ L I+H G            
Sbjct: 349  SDANWYLDSGATHHLTNDMNNMHVSESFTGISKLIVGNGAGLDITHLGSAVLKMHENEDN 408

Query: 313  XXXXXXX----CVPDITKNLLSISQFTKDNDVLIEFHDTFCLVKDKSTNQILLKGALKGG 480
                        VP ITKNL+SIS+ TKDN++++EF D FC VKDK  N ++L+G  +  
Sbjct: 409  ALSILKLNDILLVPQITKNLISISRLTKDNNIVVEFTDKFCFVKDKMKNVVILQGKAEKS 468

Query: 481  LYQL-------------------------DLSHLSAPVKXXXXXXXXXXXXKQCNVVSTS 585
            LY+L                          L+HLS                 + N + TS
Sbjct: 469  LYRLLLVSSNKTFITPSGQSYSANVESTEPLTHLSM------FSSVSSDFKNKTNCLHTS 522

Query: 586  -----------SLDVWHQRLGHPCINTFASVMKHLHIPFSCN---KLSFCEACKVGKLHS 723
                       S  V+HQRLGHP  +    V+K      + N       C+ACK+GK+H 
Sbjct: 523  AVPCINSECLLSTSVFHQRLGHPSSHVLNHVIKTCSFVKTINGNRTFDSCDACKMGKMHR 582

Query: 724  ISFPSIQSKSVAPFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKSDVYT 903
            + F   ++K+  P +++++D+WGP+   S  GY+YYV F+D+ TRFTWIFPL +K +   
Sbjct: 583  LHFSVTETKTKFPLEILHTDLWGPSPVISPQGYRYYVSFVDDCTRFTWIFPLKTKDETLP 642

Query: 904  TVLNFISMIERQFSTKIKAFQCDWGGEYRKLSSQFQSSGINFRHPCPHTHSQNGMPERKH 1083
                F + IE+QFS  IK  Q DWGGE+R   +   + GI FRH CP+TH+QNG+ ERKH
Sbjct: 643  VFKIFKTQIEKQFSRPIKCLQSDWGGEFRSFVNYLLAEGIQFRHLCPYTHNQNGLVERKH 702

Query: 1084 QHIVDLGLTLLSQAQLPFKFWWDAFSTATYLINILPTPVLHNISPFQKLLHRIPDYSFLK 1263
            +HI +LGLTLL+QA +P KFWWD+F TATY+IN LPTPVL   SP++ L    PDY FL+
Sbjct: 703  RHITELGLTLLAQAAMPLKFWWDSFHTATYIINRLPTPVLSIKSPYESLFQLSPDYKFLR 762

Query: 1264 TFGCACFPYLRPYNNHKLQFRSSKCIFLGYSPQHKGYKCLHPSGRVYIARTVAFNETDFP 1443
             FGC+CF +LR YN HK QF +SKC+FLGYSP HKGYKCLHPSGR YIA  V F+E+ FP
Sbjct: 763  VFGCSCFLFLREYNKHKFQFHTSKCVFLGYSPLHKGYKCLHPSGRTYIASHVLFDESSFP 822

Query: 1444 FSQL 1455
            +S L
Sbjct: 823  YSSL 826


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1073

 Score =  415 bits (1067), Expect = e-125
 Identities = 210/454 (46%), Positives = 280/454 (61%), Gaps = 5/454 (1%)
 Frame = +1

Query: 109  MAATTYPTTDNSWYIDSGASAHVTSELGNLSLKSPYHGHDKLTVGNGSQLLISHTGXXXX 288
            M A++  +++N+WY DSGAS HVT+   N+   +P+ G D++ VGNG  L I+ TG    
Sbjct: 1    MIASSSSSSNNNWYPDSGASNHVTNVSQNIHQFTPFEGPDQIHVGNGQGLHINSTGVTTF 60

Query: 289  XXXXXXXXXXXXXXXC-VPDITKNLLSISQFTKDNDVLIEFHDTFCLVKDKSTNQILLKG 465
                             VP ITKNL+S+SQF+KDN V  EFH   CLVK + TN++LL+G
Sbjct: 61   HSPINPKFQFALNNLLFVPSITKNLISVSQFSKDNSVYFEFHPHICLVKSQDTNEVLLQG 120

Query: 466  AL-KGGLYQLDLSHLSAPVKXXXXXXXXXXXXKQCNVVSTSSLDVWHQRLGHPCINTFAS 642
            ++   GLY+      +   +                  S  S   WH RLGHP ++    
Sbjct: 121  SVGSDGLYKFPALLPNPSTQSVQQQQLARIFSVNTAATSPVSFATWHSRLGHPNVDVMKH 180

Query: 643  VMKHLHIPF-SCNKLSFCEACKVGKLHSISFPSIQSKSV--APFDLIYSDVWGPAATPSC 813
            V ++ +I   S NK +FC  C +GK H +  PS  S+++   PFDL+YSD+WGPA   S 
Sbjct: 181  VSRNYNIQLVSNNKSNFCTPCCLGKSHRL--PSNLSRTIYNTPFDLVYSDLWGPAPVTST 238

Query: 814  DGYKYYVHFLDEFTRFTWIFPLVSKSDVYTTVLNFISMIERQFSTKIKAFQCDWGGEYRK 993
             GY+YYV F+D  TRFTWI+ L SK+  +     F +M++ Q+   IKA Q DWGGEYR 
Sbjct: 239  CGYQYYVTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRS 298

Query: 994  LSSQFQSSGINFRHPCPHTHSQNGMPERKHQHIVDLGLTLLSQAQLPFKFWWDAFSTATY 1173
             ++     GI  R  CPHTH QNG+ ERKH+HIV+LGLTL++QA+LP +FW  +F TA Y
Sbjct: 299  FTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVY 358

Query: 1174 LINILPTPVLHNISPFQKLLHRIPDYSFLKTFGCACFPYLRPYNNHKLQFRSSKCIFLGY 1353
            LIN LP+  + N  P+ KL H+ PDY  L+ FGC+CFP+LRPYN HKLQFRS +C+FLGY
Sbjct: 359  LINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGY 418

Query: 1354 SPQHKGYKCLHPSGRVYIARTVAFNETDFPFSQL 1455
            S  HKGYKCL   GR+YI++ V FNET FP+  L
Sbjct: 419  STSHKGYKCLAADGRLYISKDVVFNETKFPYKDL 452



 Score =  385 bits (988), Expect = e-114
 Identities = 197/389 (50%), Positives = 262/389 (67%), Gaps = 4/389 (1%)
 Frame = +2

Query: 1703 MVTRSKNGIYKPKAFXXXXXXXXXXXXVCQALSDPGWKEAMELEFNALLKNHTWDLVPQS 1882
            M TR+K+GI KP+                QALS+P W  AM+ E+NALL N+TW LVP  
Sbjct: 537  MTTRAKDGIVKPRLQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSLVPLP 596

Query: 1883 ADMNLISNKWVFKVKHKADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTIRIVFS 2062
                 I  KWVF+VK   +GSV++ KARLVA+GF Q  G DY ETFSPV+KP+T+R++ +
Sbjct: 597  PHRTAIGCKWVFRVKENPNGSVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVTVRLILT 656

Query: 2063 LAVSRGWSIQQVDINNAFLNGSLSQDVYMVQPEGFINPEKPTHVCKLAKALYGLKQAPRA 2242
            LA++  W IQQ+D+NNAFLNG+L ++VYM QP GF   +K   VCKL KA+YGLKQAPRA
Sbjct: 657  LALTHRWPIQQLDVNNAFLNGTLEEEVYMQQPPGFEASDK-NLVCKLHKAIYGLKQAPRA 715

Query: 2243 WFEKLRDFLLSLQFCVSASDNSLFYLKSEGKLTLVLVYVDDILLTGDDSESVLELIQKLH 2422
            WF+KL+  LL L F  S  D SLF       +  +LVYVDDI++TG++S  +  L+ +LH
Sbjct: 716  WFDKLKSTLLQLNFYASKCDPSLFIYSQGNNVIYILVYVDDIIITGNNSSILHTLVSQLH 775

Query: 2423 STFSLKHMGEVNYFLGLEAHKLP-GGYLLNQSKYISDLLVKTNMVDCKPSPSPYCSGHKL 2599
            S FSLK +G++++FLG+E    P G  +L QSKYI DLL +T+M   KP  SP  SG KL
Sbjct: 776  SIFSLKDLGDLDFFLGIEVKSQPDGSLILTQSKYIRDLLNRTDMEGSKPISSPMISGSKL 835

Query: 2600 SLNDSPAFSLPSLYRSTIGSLQYLTMTRPDIAYSVHKLSQFLHAPTEHHWSACKKVLRYL 2779
            S   S  F   SLYRS +G+LQY T+TRP+I++SV+K+ QF+  P  HHW+A K++LRYL
Sbjct: 836  SKVGSEDFLDASLYRSVVGALQYATITRPEISFSVNKVCQFMSHPLTHHWAAVKRILRYL 895

Query: 2780 KGTQLLGITFQ---ASPRMNLEAFADADW 2857
            KGT   G+  Q   +S  +++ A+ DADW
Sbjct: 896  KGTTSWGLRLQPASSSSSLSIHAYCDADW 924


>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 785

 Score =  406 bits (1044), Expect = e-125
 Identities = 220/474 (46%), Positives = 282/474 (59%), Gaps = 7/474 (1%)
 Frame = +1

Query: 55   AQAHLSEMSQHSPSAPQVMAATTYPTTDNSWYIDSGASAHVTSELGNLSLKSPYHGHDKL 234
            +QA+L     H   A   MA T    + + WY DSGAS HVT+   N+   +P+ G D++
Sbjct: 230  SQAYLVSNGAHQAQASP-MALTALSPSSHLWYPDSGASNHVTNMSHNIQQLTPFEGPDQI 288

Query: 235  TVGNGSQLLISHTGXXXXXXXXXXXXXXXXXXXC-VPDITKNLLSISQFTKDNDVLIEFH 411
             +GNG  L I+ +G                     VP+ITKNL+S+SQF KDN V  EFH
Sbjct: 289  IIGNGHGLPINSSGVTAFPSPLKPHISLTLNNLLYVPNITKNLISVSQFCKDNSVFFEFH 348

Query: 412  DTFCLVKDKSTNQILLKGAL-KGGLYQLDLSHLSAPVKXXXXXXXXXXXXKQCNVVSTSS 588
             T CLVK + T   LL G +   GLYQ     L  P +               N  S  S
Sbjct: 349  STCCLVKSQDTKDTLLMGVVGPDGLYQFP--SLLQPRQQPAITP-------SANTASCHS 399

Query: 589  LD--VWHQRLGHPCINTFASVMKHLHIPFSCNKLS-FCEACKVGKLHSISFPSIQSKSV- 756
            +    WH RLGHP  +   SV +  + P      S FC  C +GK H +  PS  SK+V 
Sbjct: 400  VPYVTWHSRLGHPHNDVIKSVFRLCNFPIINKTASDFCTPCCLGKSHKL--PSNSSKTVY 457

Query: 757  -APFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKSDVYTTVLNFISMIE 933
              PF+LIYSD+WGPA   S +GY+YYV F+D  TRFTWIF L  K+        F +MI+
Sbjct: 458  HTPFELIYSDLWGPAPITSDNGYQYYVTFVDAHTRFTWIFLLKRKAHTLDVFKQFHAMIQ 517

Query: 934  RQFSTKIKAFQCDWGGEYRKLSSQFQSSGINFRHPCPHTHSQNGMPERKHQHIVDLGLTL 1113
             QF   IKA Q DWGGE+R  +S    +GI  R  CPHTH QNG+ ERKH+HIV+LGLT+
Sbjct: 518  NQFQLPIKAIQTDWGGEFRSFTSYLAQNGIQHRLICPHTHHQNGVVERKHRHIVELGLTM 577

Query: 1114 LSQAQLPFKFWWDAFSTATYLINILPTPVLHNISPFQKLLHRIPDYSFLKTFGCACFPYL 1293
            L+QA LP +FW  AF T+ YLIN LP+  + N  PF+KL H++PDY+FL+ FGC+CFP+L
Sbjct: 578  LAQAHLPMQFWDHAFLTSVYLINRLPSSSIQNDVPFRKLFHQLPDYNFLRIFGCSCFPHL 637

Query: 1294 RPYNNHKLQFRSSKCIFLGYSPQHKGYKCLHPSGRVYIARTVAFNETDFPFSQL 1455
            RPYN +KLQFRS +C+FLGYS  HKGYKCL P+GR++I++ V F ET FP+  L
Sbjct: 638  RPYNKNKLQFRSQECVFLGYSTSHKGYKCLAPTGRIFISKDVVFCETRFPYPSL 691


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  419 bits (1077), Expect = e-124
 Identities = 218/492 (44%), Positives = 292/492 (59%), Gaps = 8/492 (1%)
 Frame = +1

Query: 1    FKRFDVSFVGLDAPPSPVAQAHLSEMSQHSPSAPQV--MAATTYPTTDNSWYIDSGASAH 174
            + RFD +F      P  ++  + S  + +S S PQV  +  T+   +D++WY DSGAS H
Sbjct: 324  YYRFDHTF----QVPQNLSSRNSSPRAYYSFS-PQVNGVIPTSEVFSDDNWYPDSGASNH 378

Query: 175  VTSELGNLSLKSPYHGHDKLTVGNGSQLLISHTGXXXXXXXXXXXXXXXXXXXCVPDITK 354
            VT    NL   + + G +++ VGNG+ L I H G                    VP ITK
Sbjct: 379  VTPNPENLMKSAEFAGQNQVHVGNGTGLSIKHIGQSEFLSPFSSKPLLLNHLLHVPSITK 438

Query: 355  NLLSISQFTKDNDVLIEFHDTFCLVKDKSTNQILLKGALKGGLYQLDLSHLSA----PVK 522
            NLLS+S+F KDN V  EFH   C VKD+ T  +L+ G ++ GLY  D SHL+      + 
Sbjct: 439  NLLSVSKFAKDNKVFFEFHSDSCFVKDQVTQAVLMVGKVRDGLYAFDSSHLALRPTQSLS 498

Query: 523  XXXXXXXXXXXXKQCNVVSTSSLDVWHQRLGHPCINTFASVMKHLHIPFSCNKL--SFCE 696
                        K C    +S+ D+WH+RLGHP   T  +V+   ++    NK+  +FC 
Sbjct: 499  KSPSVVASSFSSKVCTTSLSSTFDLWHKRLGHPSAATIKNVLSKCNVAH-INKMDSNFCS 557

Query: 697  ACKVGKLHSISFPSIQSKSVAPFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFP 876
            +C +GK+H   F    +    P +LI+ D+WGP    S  GY+YY+HF+D F+RF+WIF 
Sbjct: 558  SCCLGKIHRFPFSLSHTTYTKPLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFL 617

Query: 877  LVSKSDVYTTVLNFISMIERQFSTKIKAFQCDWGGEYRKLSSQFQSSGINFRHPCPHTHS 1056
            L +KS+   T +NF + +E QF  KIK+ Q DWGGE+R   S    +GI  R  CPHT  
Sbjct: 618  LRNKSEAIKTFVNFKTQVELQFDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQ 677

Query: 1057 QNGMPERKHQHIVDLGLTLLSQAQLPFKFWWDAFSTATYLINILPTPVLHNISPFQKLLH 1236
            QNG+ ERKH+ IV+ GLTLL  A LP KFW ++F T  YL N LPT +LH+  P + L  
Sbjct: 678  QNGVAERKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFK 737

Query: 1237 RIPDYSFLKTFGCACFPYLRPYNNHKLQFRSSKCIFLGYSPQHKGYKCLHPSGRVYIART 1416
             IPDYSFLK FGC+CFP LRPYN HKLQ+RS +C FLGYS +HKGYKC+  +GRVYI+  
Sbjct: 738  SIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHD 797

Query: 1417 VAFNETDFPFSQ 1452
            V FNET FP+S+
Sbjct: 798  VIFNETSFPYSK 809



 Score =  394 bits (1013), Expect = e-115
 Identities = 197/385 (51%), Positives = 264/385 (68%)
 Frame = +2

Query: 1703 MVTRSKNGIYKPKAFXXXXXXXXXXXXVCQALSDPGWKEAMELEFNALLKNHTWDLVPQS 1882
            M+TR+K+GI KPK F            V  AL    WK+AM  E++AL +N+TW LVP  
Sbjct: 916  MITRAKSGIVKPKIFIAAIREPSS---VSAALQQDEWKKAMVAEYDALQRNNTWSLVPLP 972

Query: 1883 ADMNLISNKWVFKVKHKADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTIRIVFS 2062
            A    I  KWV+K K   DG+V++ KARLVA+GF Q  G D+ ETFSPVVKP T+R+VF+
Sbjct: 973  AGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFDFTETFSPVVKPSTVRVVFT 1032

Query: 2063 LAVSRGWSIQQVDINNAFLNGSLSQDVYMVQPEGFINPEKPTHVCKLAKALYGLKQAPRA 2242
            +A+SR W+I+Q+D+NNAFLNG L ++V+M QP+GFI+ + P  VC+L KALYGLKQAPRA
Sbjct: 1033 IALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRA 1092

Query: 2243 WFEKLRDFLLSLQFCVSASDNSLFYLKSEGKLTLVLVYVDDILLTGDDSESVLELIQKLH 2422
            WFEKL   LLS  F  + SD SLF   +   +T VLVYVDDIL+ G D+ ++  LI +L+
Sbjct: 1093 WFEKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYVDDILVIGSDTAAITSLIAQLN 1152

Query: 2423 STFSLKHMGEVNYFLGLEAHKLPGGYLLNQSKYISDLLVKTNMVDCKPSPSPYCSGHKLS 2602
            S FSLK +GEV+YFLG++      G  L+Q+KYI DLL KT MV CKP+ +P  +G KL 
Sbjct: 1153 SEFSLKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLR 1212

Query: 2603 LNDSPAFSLPSLYRSTIGSLQYLTMTRPDIAYSVHKLSQFLHAPTEHHWSACKKVLRYLK 2782
            + D         YRST+G+LQY+T+TRP++++SV+K+ QF+  PTE HW   K++LRYL+
Sbjct: 1213 VGDGDPVEDLHGYRSTVGALQYVTITRPELSFSVNKVCQFMQNPTEEHWKVVKRILRYLQ 1272

Query: 2783 GTQLLGITFQASPRMNLEAFADADW 2857
            GT   G+  + S  ++L  F DADW
Sbjct: 1273 GTLQHGLHLKKSSNLDLIGFCDADW 1297


>ref|XP_015900354.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
            [Ziziphus jujuba]
          Length = 441

 Score =  390 bits (1001), Expect = e-123
 Identities = 195/389 (50%), Positives = 260/389 (66%), Gaps = 4/389 (1%)
 Frame = +2

Query: 1703 MVTRSKNGIYKPKA----FXXXXXXXXXXXXVCQALSDPGWKEAMELEFNALLKNHTWDL 1870
            M TRS N I+KPK     +              QAL+ P W++AM  E++ALLKN+TW L
Sbjct: 1    MHTRSLNQIFKPKLLPDFYVASISNSNEPKTAKQALAIPAWRDAMHNEYHALLKNNTWTL 60

Query: 1871 VPQSADMNLISNKWVFKVKHKADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTIR 2050
            VP ++  NLI  KWVF  K   DGS+++ KARLVA+GF Q PG++YF TFSPVVKP T+R
Sbjct: 61   VPPASTQNLIGCKWVFCTKSNPDGSLQQYKARLVAKGFHQRPGINYFNTFSPVVKPTTVR 120

Query: 2051 IVFSLAVSRGWSIQQVDINNAFLNGSLSQDVYMVQPEGFINPEKPTHVCKLAKALYGLKQ 2230
             V  LA+   W IQQ+D+NN FLNG L ++V+MVQP GFI+P K  HVC+L KA+YGLKQ
Sbjct: 121  TVICLALFNNWPIQQLDVNNTFLNGVLQEEVFMVQPTGFIDPTKLNHVCRLNKAIYGLKQ 180

Query: 2231 APRAWFEKLRDFLLSLQFCVSASDNSLFYLKSEGKLTLVLVYVDDILLTGDDSESVLELI 2410
            APR W+   ++FL+   F  S +D SLF    +G    +LVYVDDI+LTG++S  + + I
Sbjct: 181  APRVWYTGFKEFLIKFGFKNSYADTSLFIYSKQGLTLYLLVYVDDIILTGNNSTLLSDFI 240

Query: 2411 QKLHSTFSLKHMGEVNYFLGLEAHKLPGGYLLNQSKYISDLLVKTNMVDCKPSPSPYCSG 2590
            + L + FSLK +G ++YFLG++      G LL+Q KYI+DLL   NM+D KP  +P  + 
Sbjct: 241  KALSNKFSLKDLGSLHYFLGIQVLPTATGVLLSQQKYITDLLDSMNMLDSKPYSTPMAAN 300

Query: 2591 HKLSLNDSPAFSLPSLYRSTIGSLQYLTMTRPDIAYSVHKLSQFLHAPTEHHWSACKKVL 2770
              LS+ND      P+ YR  IGSLQYL +TRPDIAY V+KLSQF+H PT+ HW++ K +L
Sbjct: 301  TSLSVNDGKPLDSPTEYRRLIGSLQYLLITRPDIAYYVNKLSQFMHCPTQVHWASAKCLL 360

Query: 2771 RYLKGTQLLGITFQASPRMNLEAFADADW 2857
            RYL GTQ  G+    +  +NL AF++A+W
Sbjct: 361  RYLNGTQSHGLALHKNSPLNLHAFSNANW 389


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  416 bits (1069), Expect = e-123
 Identities = 218/490 (44%), Positives = 290/490 (59%), Gaps = 5/490 (1%)
 Frame = +1

Query: 1    FKRFDVSFVGLDAPPSPVAQAHLSEMSQHSPSAPQVMAATTYPTTDNSWYIDSGASAHVT 180
            + RFD ++V    P SP+           +P+ P     T     +N+WY DSGAS HVT
Sbjct: 314  YYRFDETYV----PSSPL----------EAPAYPSNNQHTNPGACNNNWYPDSGASNHVT 359

Query: 181  SELGNLSLKSPYHGHDKLTVGNGSQLLISHTGXXXXXXXXXXXXXXXXXXXC-VPDITKN 357
            +   N+   +P+ G D++ VGNG  L I+ TG                     VP ITKN
Sbjct: 360  NVSQNIHQFTPFEGPDQIHVGNGQGLHINSTGVTTFHSPINPKFQFALNNLLFVPSITKN 419

Query: 358  LLSISQFTKDNDVLIEFHDTFCLVKDKSTNQILLKGAL-KGGLYQLDLSHLSAPVKXXXX 534
            L+S+SQF+KDN V  EFH   CLVK + TN++LL+G++   GLY+      +   +    
Sbjct: 420  LISVSQFSKDNSVYFEFHPHICLVKSQDTNEVLLQGSVGSDGLYKFPALLPNPSTQSVQQ 479

Query: 535  XXXXXXXXKQCNVVSTSSLDVWHQRLGHPCINTFASVMKHLHIPF-SCNKLSFCEACKVG 711
                          S  S   WH RLGHP ++    V ++ +I   S NK +FC  C +G
Sbjct: 480  QQLARIFSVNTAATSPVSFATWHSRLGHPNVDVMKHVSRNYNIQLVSNNKSNFCTPCCLG 539

Query: 712  KLHSISFPSIQSKSV--APFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVS 885
            K H +  PS  S+++   PFDL+YSD+WGPA   S  GY+YYV F+D  TRFTWI+ L S
Sbjct: 540  KSHRL--PSNLSRTIYNTPFDLVYSDLWGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKS 597

Query: 886  KSDVYTTVLNFISMIERQFSTKIKAFQCDWGGEYRKLSSQFQSSGINFRHPCPHTHSQNG 1065
            K+  +     F +M++ Q+   IKA Q DWGGEYR  ++     GI  R  CPHTH QNG
Sbjct: 598  KAQTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSFTTYLNEVGIQHRLICPHTHHQNG 657

Query: 1066 MPERKHQHIVDLGLTLLSQAQLPFKFWWDAFSTATYLINILPTPVLHNISPFQKLLHRIP 1245
            + ERKH+HIV+LGLTL++QA+LP +FW  +F TA YLIN LP+  + N  P+ KL H+ P
Sbjct: 658  VAERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHKLFHQPP 717

Query: 1246 DYSFLKTFGCACFPYLRPYNNHKLQFRSSKCIFLGYSPQHKGYKCLHPSGRVYIARTVAF 1425
            DY  L+ FGC+CFP+LRPYN HKLQFRS +C+FLGYS  HKGYKCL   GR+YI++ V F
Sbjct: 718  DYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYISKDVVF 777

Query: 1426 NETDFPFSQL 1455
            NET FP+  L
Sbjct: 778  NETKFPYKDL 787



 Score =  385 bits (988), Expect = e-112
 Identities = 197/389 (50%), Positives = 262/389 (67%), Gaps = 4/389 (1%)
 Frame = +2

Query: 1703 MVTRSKNGIYKPKAFXXXXXXXXXXXXVCQALSDPGWKEAMELEFNALLKNHTWDLVPQS 1882
            M TR+K+GI KP+                QALS+P W  AM+ E+NALL N+TW LVP  
Sbjct: 872  MTTRAKDGIVKPRLQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSLVPLP 931

Query: 1883 ADMNLISNKWVFKVKHKADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTIRIVFS 2062
                 I  KWVF+VK   +GSV++ KARLVA+GF Q  G DY ETFSPV+KP+T+R++ +
Sbjct: 932  PHRTAIGCKWVFRVKENPNGSVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVTVRLILT 991

Query: 2063 LAVSRGWSIQQVDINNAFLNGSLSQDVYMVQPEGFINPEKPTHVCKLAKALYGLKQAPRA 2242
            LA++  W IQQ+D+NNAFLNG+L ++VYM QP GF   +K   VCKL KA+YGLKQAPRA
Sbjct: 992  LALTHRWPIQQLDVNNAFLNGTLEEEVYMQQPPGFEASDK-NLVCKLHKAIYGLKQAPRA 1050

Query: 2243 WFEKLRDFLLSLQFCVSASDNSLFYLKSEGKLTLVLVYVDDILLTGDDSESVLELIQKLH 2422
            WF+KL+  LL L F  S  D SLF       +  +LVYVDDI++TG++S  +  L+ +LH
Sbjct: 1051 WFDKLKSTLLQLNFYASKCDPSLFIYSQGNNVIYILVYVDDIIITGNNSSILHTLVSQLH 1110

Query: 2423 STFSLKHMGEVNYFLGLEAHKLP-GGYLLNQSKYISDLLVKTNMVDCKPSPSPYCSGHKL 2599
            S FSLK +G++++FLG+E    P G  +L QSKYI DLL +T+M   KP  SP  SG KL
Sbjct: 1111 SIFSLKDLGDLDFFLGIEVKSQPDGSLILTQSKYIRDLLNRTDMEGSKPISSPMISGSKL 1170

Query: 2600 SLNDSPAFSLPSLYRSTIGSLQYLTMTRPDIAYSVHKLSQFLHAPTEHHWSACKKVLRYL 2779
            S   S  F   SLYRS +G+LQY T+TRP+I++SV+K+ QF+  P  HHW+A K++LRYL
Sbjct: 1171 SKVGSEDFLDASLYRSVVGALQYATITRPEISFSVNKVCQFMSHPLTHHWAAVKRILRYL 1230

Query: 2780 KGTQLLGITFQ---ASPRMNLEAFADADW 2857
            KGT   G+  Q   +S  +++ A+ DADW
Sbjct: 1231 KGTTSWGLRLQPASSSSSLSIHAYCDADW 1259


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 839

 Score =  401 bits (1031), Expect = e-122
 Identities = 215/446 (48%), Positives = 272/446 (60%), Gaps = 7/446 (1%)
 Frame = +1

Query: 139  NSWYIDSGASAHVTSELGNLSLKSPYHGHDKLTVGNGSQLLISHTGXXXXXXXXXXXXXX 318
            N WY DSGAS HVT+   N+   +P+ G D++ +GNG  + I+ +G              
Sbjct: 9    NIWYPDSGASNHVTNVSHNIQQYTPFEGPDQIVIGNGQGIPINSSGVTHFSSPLNPHISL 68

Query: 319  XXXXXC-VPDITKNLLSISQFTKDNDVLIEFHDTFCLVKDKSTNQILLKGAL-KGGLYQL 492
                   VP ITKNL+S+SQF KDN V  EFH TFCLVK ++ ++ LL G L   GLYQ 
Sbjct: 69   TLHNLLYVPTITKNLISVSQFCKDNSVFFEFHSTFCLVKSQANSETLLHGVLGPDGLYQF 128

Query: 493  DLSHLSAPVKXXXXXXXXXXXXKQCNVVSTSSLD--VWHQRLGHPCINTFASVMKHLHIP 666
                L  P +               + VS+ S+    WH RLGHP  +   SV K  + P
Sbjct: 129  P--SLLPPRQP------------SAHTVSSQSVSYATWHSRLGHPHNDVLKSVFKLCNFP 174

Query: 667  FSCNKLS-FCEACKVGKLHSISFPSIQSKSV--APFDLIYSDVWGPAATPSCDGYKYYVH 837
                 +S FC +C +GK H +  PS  SK+V   PF+LIYSD+WGPA   S +GY+YYV 
Sbjct: 175  NINKSVSDFCTSCCLGKSHKL--PSQLSKTVYHTPFELIYSDLWGPAPVLSDNGYQYYVT 232

Query: 838  FLDEFTRFTWIFPLVSKSDVYTTVLNFISMIERQFSTKIKAFQCDWGGEYRKLSSQFQSS 1017
            F+D  TRFTWIF L SK+        F +M+  QF   IKA Q DWGGE+R  +S     
Sbjct: 233  FVDAHTRFTWIFMLKSKAHTLDVFKQFHAMVRNQFQLPIKAIQTDWGGEFRSFTSYLAQH 292

Query: 1018 GINFRHPCPHTHSQNGMPERKHQHIVDLGLTLLSQAQLPFKFWWDAFSTATYLINILPTP 1197
            GI+ R  CPHTH QNG+ ERKH+HIV+LGLTLL+QA LP  FW  AF T+ YLIN LP+ 
Sbjct: 293  GIHHRIICPHTHHQNGVVERKHRHIVELGLTLLAQAHLPMHFWDYAFLTSVYLINRLPSS 352

Query: 1198 VLHNISPFQKLLHRIPDYSFLKTFGCACFPYLRPYNNHKLQFRSSKCIFLGYSPQHKGYK 1377
             +    PF+KL H +PDY+FL+ FGC+CFP+LRPYN  KLQFRS +C+FLGYS  HKGYK
Sbjct: 353  SIQQDVPFRKLFHHLPDYNFLRVFGCSCFPHLRPYNKTKLQFRSQECVFLGYSTSHKGYK 412

Query: 1378 CLHPSGRVYIARTVAFNETDFPFSQL 1455
            CL PSGRV+I++ V F E  FP+  L
Sbjct: 413  CLAPSGRVFISKDVIFCENRFPYPTL 438



 Score =  307 bits (787), Expect = 2e-87
 Identities = 162/327 (49%), Positives = 217/327 (66%), Gaps = 1/327 (0%)
 Frame = +2

Query: 1703 MVTRSKNGIYKPKAFXXXXXXXXXXXXVCQALSDPGWKEAMELEFNALLKNHTWDLVPQS 1882
            M TR+K GI KP+                QAL+   W  AM+ E+NAL+ N TW LVP  
Sbjct: 514  MTTRAKAGIVKPRLQPTLLLTHFEPKNTKQALASDTWLAAMKQEYNALMANGTWTLVPLP 573

Query: 1883 ADMNLISNKWVFKVKHKADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTIRIVFS 2062
            +    I  KWVF++K   DG+V + KARLVA+GF Q  G DY ETFSPVVKP+TIR++ +
Sbjct: 574  SHRTAIGCKWVFRIKENPDGTVHKHKARLVAKGFHQQFGFDYTETFSPVVKPVTIRLILT 633

Query: 2063 LAVSRGWSIQQVDINNAFLNGSLSQDVYMVQPEGFINPEKPTHVCKLAKALYGLKQAPRA 2242
            LA++  WSIQQ+D+NNAFLNG+L ++VYM QP GF + +K + VCKL KA+YGLKQAPRA
Sbjct: 634  LALTHHWSIQQLDVNNAFLNGNLEEEVYMSQPPGFESSDK-SLVCKLHKAIYGLKQAPRA 692

Query: 2243 WFEKLRDFLLSLQFCVSASDNSLFYLKSEGKLTLVLVYVDDILLTGDDSESVLELIQKLH 2422
            WF+KL+  L  L F +S  D SLF       +  +LVYVDDI++TG+++  +  ++ +L+
Sbjct: 693  WFDKLKATLFHLNFQISKCDPSLFVYSHANNVIYILVYVDDIIITGNNTTFLRNIVSQLN 752

Query: 2423 STFSLKHMGEVNYFLGLEAH-KLPGGYLLNQSKYISDLLVKTNMVDCKPSPSPYCSGHKL 2599
            S FSLK +G+++YFLG+E +    G  +L QSKYI DLL +TNM +     SP  SG KL
Sbjct: 753  SAFSLKDLGKLDYFLGIEVNSNSDGSLILTQSKYIRDLLNRTNMENSNSITSPMVSGCKL 812

Query: 2600 SLNDSPAFSLPSLYRSTIGSLQYLTMT 2680
            S + S  F   SLYRS +G+LQY T+T
Sbjct: 813  SKSGSDKFLDVSLYRSVVGALQYATIT 839


>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score =  404 bits (1037), Expect = e-121
 Identities = 203/393 (51%), Positives = 264/393 (67%), Gaps = 8/393 (2%)
 Frame = +2

Query: 1703 MVTRSKNGIYKPKAFXXXXXXXXXXXX--------VCQALSDPGWKEAMELEFNALLKNH 1858
            M TRSK G  KPK                      V QAL +P W   M  E+ AL++N+
Sbjct: 460  MTTRSKVGTIKPKLLPDHITYLSTSVSPSDQLPTTVSQALKNPNWHTTMVEEYQALVRNN 519

Query: 1859 TWDLVPQSADMNLISNKWVFKVKHKADGSVERLKARLVARGFQQIPGLDYFETFSPVVKP 2038
            TW LVP    MN+I +KW+F+VK+ +DG+++R KARLVA+GFQQ  G+++ +TFSPV+K 
Sbjct: 520  TWTLVPFHPSMNVIDSKWIFRVKYNSDGTIQRYKARLVAKGFQQYAGVEFTDTFSPVIKA 579

Query: 2039 LTIRIVFSLAVSRGWSIQQVDINNAFLNGSLSQDVYMVQPEGFINPEKPTHVCKLAKALY 2218
             TIR+VF+LA++  W I+Q+D NNAFLNG +++ VY+ QP GF++   P HVCKL KALY
Sbjct: 580  STIRVVFTLAITYNWEIRQIDFNNAFLNGEITETVYLSQPAGFVSTSHPQHVCKLQKALY 639

Query: 2219 GLKQAPRAWFEKLRDFLLSLQFCVSASDNSLFYLKSEGKLTLVLVYVDDILLTGDDSESV 2398
            GLKQAPR WF KLR+ L +  F  S SD SLF  K  G   L+LVYVDD+L+TG++   V
Sbjct: 640  GLKQAPRVWFHKLREALHTWGFISSTSDTSLFIYKHNGNFLLLLVYVDDLLITGNNVPLV 699

Query: 2399 LELIQKLHSTFSLKHMGEVNYFLGLEAHKLPGGYLLNQSKYISDLLVKTNMVDCKPSPSP 2578
              LIQ L + F+LK +G V  FLG EA +   G  L QSKY +DLL+KT M   KP P+P
Sbjct: 700  QTLIQDLQNRFALKDLGLVKDFLGFEALRTTTGLHLTQSKYTTDLLIKTKMHSAKPVPTP 759

Query: 2579 YCSGHKLSLNDSPAFSLPSLYRSTIGSLQYLTMTRPDIAYSVHKLSQFLHAPTEHHWSAC 2758
              +  KL     PAFS P+LYRSTIG+LQYLT TRPDIA++V+KLSQ+L  PTE HW+AC
Sbjct: 760  MSAALKLHAASGPAFSDPTLYRSTIGALQYLTYTRPDIAFAVNKLSQYLQQPTELHWTAC 819

Query: 2759 KKVLRYLKGTQLLGITFQASPRMNLEAFADADW 2857
            K+VLRYLKG    G+ F  +  ++L+ + DADW
Sbjct: 820  KRVLRYLKGIVHRGLHFTPASSLHLQVYTDADW 852


>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
          Length = 773

 Score =  396 bits (1018), Expect = e-121
 Identities = 192/385 (49%), Positives = 270/385 (70%)
 Frame = +2

Query: 1703 MVTRSKNGIYKPKAFXXXXXXXXXXXXVCQALSDPGWKEAMELEFNALLKNHTWDLVPQS 1882
            MVTR+K+GI+K ++F              QA  +  W +AM  E+ ALL+N+TW LVP  
Sbjct: 184  MVTRAKSGIHKKRSFIVQHTTEPRTYS--QAFKNDSWVQAMNSEYQALLRNNTWSLVPPP 241

Query: 1883 ADMNLISNKWVFKVKHKADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTIRIVFS 2062
            +  +++  +W++K+K++ DGS++R KARLVA+GF Q PG+DYF+TFSPVVKP TIR++ +
Sbjct: 242  SSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILA 301

Query: 2063 LAVSRGWSIQQVDINNAFLNGSLSQDVYMVQPEGFINPEKPTHVCKLAKALYGLKQAPRA 2242
            LAVS  WS++Q+D+ N FLNG L ++V+M QP+GF+NP  PT+VCKL KALYGLKQAPRA
Sbjct: 302  LAVSFQWSVRQLDVENGFLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRA 361

Query: 2243 WFEKLRDFLLSLQFCVSASDNSLFYLKSEGKLTLVLVYVDDILLTGDDSESVLELIQKLH 2422
            WF+KLR  LL   F  S +D SLF   +   + ++LVYVDDIL+TG +   V   I  L 
Sbjct: 362  WFQKLRIALLDYGFQSSRADTSLFIFHTATDILILLVYVDDILVTGSNPTLVSHFISYLR 421

Query: 2423 STFSLKHMGEVNYFLGLEAHKLPGGYLLNQSKYISDLLVKTNMVDCKPSPSPYCSGHKLS 2602
            + F+L+ +G ++YFLG++A +L     LNQ KYI+DLL +T M   KP+P+P   G  LS
Sbjct: 422  TKFALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLS 481

Query: 2603 LNDSPAFSLPSLYRSTIGSLQYLTMTRPDIAYSVHKLSQFLHAPTEHHWSACKKVLRYLK 2782
             +D  + S PS YR T+G+LQY+T+TRPDIA++V+K  QF+  P++ HW A K++LRYLK
Sbjct: 482  QSDGVSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYLK 541

Query: 2783 GTQLLGITFQASPRMNLEAFADADW 2857
            GT  LG+ FQ +  M  + ++DADW
Sbjct: 542  GTIHLGLHFQPAASMEXQGYSDADW 566



 Score =  140 bits (353), Expect = 1e-30
 Identities = 63/112 (56%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1114 LSQAQLPFKFWWDAFSTATYLINILPTPVLHNISPFQKLLHRIPDYSFLKTFGCACFPYL 1293
            ++Q+ LP K+W  AF TA YLIN+LP  +LH  SP Q L H++P+Y  L+ FGC CFP L
Sbjct: 1    MAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSL 60

Query: 1294 RPYNNHKLQFRSSKCIFLGYSPQHKGYKCLHPS-GRVYIARTVAFNETDFPF 1446
            RPY  HKL +RS+ C+FLGY+P HKGY CL  S  R+YI+R V F+E+ FPF
Sbjct: 61   RPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPF 112


>gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1403

 Score =  410 bits (1054), Expect = e-121
 Identities = 200/439 (45%), Positives = 275/439 (62%), Gaps = 3/439 (0%)
 Frame = +1

Query: 136  DNSWYIDSGASAHVTSELGNLSLKSPYHGHDKLTVGNGSQLLISHTGXXXXXXXXXXXXX 315
            D+ WY DSGA+ H+TS+L NL  K+ Y G DK+ +GNG  + I+HTG             
Sbjct: 327  DDQWYPDSGATNHLTSDLNNLGSKTDYTGQDKIHMGNGQAIGINHTGTSFFHTPMSSKIF 386

Query: 316  XXXXXXCVPDITKNLLSISQFTKDNDVLIEFHDTFCLVKDKSTNQILLKGALKGGLYQLD 495
                   VP ITKNLLS+S+F KDN+V +EFH  +CLVK + + + LL+G LK GLY  D
Sbjct: 387  TLKELLHVPHITKNLLSVSKFCKDNNVYVEFHTNYCLVKSQDSKETLLRGNLKNGLYVFD 446

Query: 496  LSHLSAPVKXXXXXXXXXXXXKQCNVVST-SSLDVWHQRLGHPCINTFASVMKHLHIPFS 672
               +  P                  V  T  S DVWH RL H       +VMK  ++P  
Sbjct: 447  EVQILKPDVYEHTVDSVPTNRTTLYVQRTRKSYDVWHNRLAHASRKIVQAVMKTCNVPMP 506

Query: 673  CNKLS--FCEACKVGKLHSISFPSIQSKSVAPFDLIYSDVWGPAATPSCDGYKYYVHFLD 846
             N      C++C +GK H++ F    +   +P +L+YSDVWGP+   S +G++YYVHF D
Sbjct: 507  INHQDSIVCKSCCIGKSHTLPFSDSYTVYNSPLELVYSDVWGPSHYASREGFRYYVHFTD 566

Query: 847  EFTRFTWIFPLVSKSDVYTTVLNFISMIERQFSTKIKAFQCDWGGEYRKLSSQFQSSGIN 1026
             F+++TWI+ + +KS+     ++F SM+E QF  KIK FQ D G E+  L+  F  +GI 
Sbjct: 567  AFSKYTWIYFMHNKSETAHHFIHFKSMVENQFGHKIKMFQSDGGKEFTCLTKLFNENGIT 626

Query: 1027 FRHPCPHTHSQNGMPERKHQHIVDLGLTLLSQAQLPFKFWWDAFSTATYLINILPTPVLH 1206
             R  CPH+H QNG  ERKH+HI ++GLTLLS + LP  FW DAFSTA ++IN LPTP+L 
Sbjct: 627  HRLSCPHSHQQNGTAERKHRHITEVGLTLLSSSGLPHIFWSDAFSTAIHVINRLPTPILG 686

Query: 1207 NISPFQKLLHRIPDYSFLKTFGCACFPYLRPYNNHKLQFRSSKCIFLGYSPQHKGYKCLH 1386
            + SP++ L ++IPDY  L+ FGCAC+P+LRP+N+HK+ FRSS+C+F+GYS QHKGYKC  
Sbjct: 687  HKSPYEVLFNKIPDYLLLRPFGCACYPHLRPFNSHKMDFRSSQCVFIGYSMQHKGYKCFT 746

Query: 1387 PSGRVYIARTVAFNETDFP 1443
             +G++ I+R V F+E  FP
Sbjct: 747  TNGKIIISRNVVFDEDTFP 765



 Score =  394 bits (1013), Expect = e-115
 Identities = 203/386 (52%), Positives = 266/386 (68%), Gaps = 1/386 (0%)
 Frame = +2

Query: 1703 MVTRSKNGIYKPKAFXXXXXXXXXXXXVCQALSDPGWKEAMELEFNALLKNHTWDLVPQS 1882
            M+TR+K G++KPKAF            V QAL +  WK+AM+ E+NALLKNHTWDLV   
Sbjct: 864  MITRAKIGVFKPKAFLATSEPIS----VAQALDNKHWKQAMQDEYNALLKNHTWDLVSLP 919

Query: 1883 ADMNLISNKWVFKVKHKADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTIRIVFS 2062
                 I+ KW+FK K+K DGS+ R KARLVARGF Q  GLDY +TFSPVVKP++IRIV +
Sbjct: 920  PGRTAITCKWIFKNKYKQDGSILRHKARLVARGFSQQQGLDYTDTFSPVVKPVSIRIVLA 979

Query: 2063 LAVSRGWSIQQVDINNAFLNGSLSQDVYMVQPEGFINPEKPTHVCKLAKALYGLKQAPRA 2242
            LAVS+GW I Q+D++NAFLNG L +D+YM+QP+GF N   P  VCKL KALYGLKQAPRA
Sbjct: 980  LAVSKGWPIHQIDVDNAFLNGDLKEDIYMLQPQGFHN-GAPNTVCKLRKALYGLKQAPRA 1038

Query: 2243 WFEKLRDFLLSLQFCVSASDNSLFYLKSEGKLTLVLVYVDDILLTGDDSESVLELIQKLH 2422
            WF+KL   LL L F  + SD+SLF   S+     +L+YVDDI++T +   ++  LI  LH
Sbjct: 1039 WFQKLTLILLQLGFKQARSDSSLFTFTSKVTSIYILIYVDDIIITSNSPAAIQTLISTLH 1098

Query: 2423 STFSLKHMGEVNYFLGLEAHK-LPGGYLLNQSKYISDLLVKTNMVDCKPSPSPYCSGHKL 2599
              F LK +G ++YFLG+E +    GG  L+Q+KY+ D+L K NM + KP  +P     KL
Sbjct: 1099 RFFPLKDLGSLHYFLGIEVNSDGAGGIHLSQTKYLKDILDKLNMSNAKPVKTPMAPSLKL 1158

Query: 2600 SLNDSPAFSLPSLYRSTIGSLQYLTMTRPDIAYSVHKLSQFLHAPTEHHWSACKKVLRYL 2779
            + + +     PSLYRS IG+LQYLT+TRPDIAY+V+KL QF+H P E HW A K++LRYL
Sbjct: 1159 TNDGTAVCPDPSLYRSVIGALQYLTITRPDIAYTVNKLCQFMHHPLESHWKAVKRLLRYL 1218

Query: 2780 KGTQLLGITFQASPRMNLEAFADADW 2857
            +GT   G+ ++ S    + A+ D+DW
Sbjct: 1219 QGTLQHGLHYKKSTDTGIHAYCDSDW 1244


>gb|KYP68420.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 653

 Score =  392 bits (1006), Expect = e-121
 Identities = 211/486 (43%), Positives = 282/486 (58%), Gaps = 5/486 (1%)
 Frame = +1

Query: 1    FKRFDVSFVGLDAPPSPVAQAHLSEMSQHSPSAPQVMAATTYPTTDNSWYIDSGASAHVT 180
            + RFD ++V    P SP+        +QH+ ++            +N+WY DSGAS HVT
Sbjct: 186  YYRFDETYV----PSSPLEAPAYHSTNQHANTS----------VCNNNWYPDSGASNHVT 231

Query: 181  SELGNLSLKSPYHGHDKLTVGNGSQLLISHTGXXXXXXXXXXXXXXXXXXXC-VPDITKN 357
            +   N+   +P+ G D++ VGNG  L I+ TG                     VP ITKN
Sbjct: 232  NVSQNIQQFTPFEGPDQIHVGNGQGLHINSTGVTTFHSPINPKFQFALNNLLFVPSITKN 291

Query: 358  LLSISQFTKDNDVLIEFHDTFCLVKDKSTNQILLKGAL-KGGLYQLDLSHLSAPVKXXXX 534
            L+S+SQF+KDN V  EFH   CLVK + T ++LL+G++   GLYQ      +   +    
Sbjct: 292  LISVSQFSKDNSVYFEFHPYICLVKSQDTKEVLLQGSVGPDGLYQFPALLPTPSTQSVQQ 351

Query: 535  XXXXXXXXKQCNVVSTSSLDVWHQRLGHPCINTFASVMKHLHIPF-SCNKLSFCEACKVG 711
                          S  S   WH RLGHP ++    V ++ +I   + NK  FC  C +G
Sbjct: 352  VQPARSFSVNTTAKSYVSFATWHSRLGHPNVDVMKHVSRNFNIQLVTNNKSDFCTPCCLG 411

Query: 712  KLHSISFPSIQSKSV--APFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVS 885
            K H +  PS  SK+V   PFDL+YSD+ GPA   S  GY+YYV F+D  TRFT++  L S
Sbjct: 412  KSHRL--PSNLSKTVYNTPFDLVYSDLCGPAPVTSTCGYQYYVTFVDAHTRFTYL--LKS 467

Query: 886  KSDVYTTVLNFISMIERQFSTKIKAFQCDWGGEYRKLSSQFQSSGINFRHPCPHTHSQNG 1065
            K+  +     F +M++ Q+   IKA Q DWGGEYR  ++     GI  R  CPHTH +NG
Sbjct: 468  KAQTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSFTNYLNEVGIQHRLICPHTHHRNG 527

Query: 1066 MPERKHQHIVDLGLTLLSQAQLPFKFWWDAFSTATYLINILPTPVLHNISPFQKLLHRIP 1245
            + ERKH+HI++LGLTLL+QA+LP +FW  AF T  YLIN LP+  + N  P+ KL H+ P
Sbjct: 528  VVERKHRHIIELGLTLLAQAELPMQFWDHAFLTGVYLINRLPSSSIQNAIPYHKLFHQPP 587

Query: 1246 DYSFLKTFGCACFPYLRPYNNHKLQFRSSKCIFLGYSPQHKGYKCLHPSGRVYIARTVAF 1425
            DY  L+ FGC+CFP+LRPYN HKLQFRS +C+F+GYS  HKGYKCL    R+YI+  V F
Sbjct: 588  DYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFVGYSTSHKGYKCLAADERLYISNDVVF 647

Query: 1426 NETDFP 1443
            NET FP
Sbjct: 648  NETKFP 653


>gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1085

 Score =  402 bits (1033), Expect = e-120
 Identities = 214/490 (43%), Positives = 284/490 (57%), Gaps = 5/490 (1%)
 Frame = +1

Query: 1    FKRFDVSFVGLDAPPSPVAQAHLSEMSQHSPSAPQVMAATTYPTTDNSWYIDSGASAHVT 180
            + RFD ++V    P SP+        +QH+ ++            +N+WY DSGAS HVT
Sbjct: 186  YYRFDETYV----PSSPLEAPAYHSTNQHANTS----------VCNNNWYPDSGASNHVT 231

Query: 181  SELGNLSLKSPYHGHDKLTVGNGSQLLISHTGXXXXXXXXXXXXXXXXXXXC-VPDITKN 357
            +   N+   +P+ G D++ VGNG  L I+ TG                     V  ITKN
Sbjct: 232  NVSQNIQQFTPFEGPDQIHVGNGQGLHINSTGVTTFHSPINPKFQFALNNLLFVLSITKN 291

Query: 358  LLSISQFTKDNDVLIEFHDTFCLVKDKSTNQILLKGAL-KGGLYQLDLSHLSAPVKXXXX 534
            L+S+SQF+KDN V  EFH   CLVK + T ++LL+G++   GLYQ      +   +    
Sbjct: 292  LISVSQFSKDNSVYFEFHPYICLVKSQDTKEVLLQGSVGPDGLYQFPALLPTPSTQSVQQ 351

Query: 535  XXXXXXXXKQCNVVSTSSLDVWHQRLGHPCINTFASVMKHLHIPF-SCNKLSFCEACKVG 711
                          S  S   WH RLGHP ++    V ++ +I   + NK  FC  C +G
Sbjct: 352  VQPARSFSVNTAAKSYVSFATWHSRLGHPNVDVMKHVSRNFNIQLVTNNKSDFCTPCCLG 411

Query: 712  KLHSISFPSIQSKSV--APFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVS 885
            K H +  PS  SK V   PFDL+Y+D+WGPA   S  GY+YYV F+D  TRFTWI+ L +
Sbjct: 412  KSHRL--PSNLSKIVYNTPFDLVYNDLWGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKN 469

Query: 886  KSDVYTTVLNFISMIERQFSTKIKAFQCDWGGEYRKLSSQFQSSGINFRHPCPHTHSQNG 1065
            K+  +     F +M+  Q+   IKA Q DWGGEYR  ++     GI  R  C HTH QNG
Sbjct: 470  KAQTFNVFKQFHAMVNNQYHHPIKALQTDWGGEYRSFTNYLNEVGIQHRLICRHTHHQNG 529

Query: 1066 MPERKHQHIVDLGLTLLSQAQLPFKFWWDAFSTATYLINILPTPVLHNISPFQKLLHRIP 1245
            + ERKH+HIV+LGLTLL+QA+LP +FW  AF T  YLIN LP+  + N+ P+ KL H+ P
Sbjct: 530  VVERKHRHIVELGLTLLAQAELPMQFWDHAFLTGVYLINRLPSSSIQNVVPYHKLFHQPP 589

Query: 1246 DYSFLKTFGCACFPYLRPYNNHKLQFRSSKCIFLGYSPQHKGYKCLHPSGRVYIARTVAF 1425
            DY  L+ FGC+CFP+LRPYN HKLQFRS +C+FLGYS  HKGYKCL    R+YI+  V F
Sbjct: 590  DYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADERLYISNDVVF 649

Query: 1426 NETDFPFSQL 1455
            NET FP+ +L
Sbjct: 650  NETKFPYKEL 659



 Score =  194 bits (492), Expect = 3e-47
 Identities = 98/185 (52%), Positives = 124/185 (67%)
 Frame = +2

Query: 1799 SDPGWKEAMELEFNALLKNHTWDLVPQSADMNLISNKWVFKVKHKADGSVERLKARLVAR 1978
            SD     A   E+NALL N TW LVP       I  KWVF+VK   +G+V++ KARLVA+
Sbjct: 704  SDSYTPGAAATEYNALLHNDTWSLVPLPPHRTAIGCKWVFRVKENPNGTVQKYKARLVAK 763

Query: 1979 GFQQIPGLDYFETFSPVVKPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLSQDVYMVQP 2158
            GF Q  G DY ETFSPV+KP+T+R++ +LA++  W IQQ+D+NNAFLNG+L ++VYM QP
Sbjct: 764  GFNQQFGFDYHETFSPVIKPVTVRLILTLALTHRWPIQQLDVNNAFLNGTLEEEVYMTQP 823

Query: 2159 EGFINPEKPTHVCKLAKALYGLKQAPRAWFEKLRDFLLSLQFCVSASDNSLFYLKSEGKL 2338
             GF   +K   VCKL KA+YGLKQAPRAWF+KL+  LL L F  S  D SLF       +
Sbjct: 824  PGFEASDK-NLVCKLHKAIYGLKQAPRAWFDKLKSTLLQLNFYASKCDPSLFVYSHANNV 882

Query: 2339 TLVLV 2353
              +LV
Sbjct: 883  IYILV 887



 Score = 62.4 bits (150), Expect = 3e-06
 Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
 Frame = +2

Query: 2597 LSLNDSPAFSLPSLY-RSTIGSLQYLTMTRPDIAYSVHKLSQFLHAPTEHHWSACKKVLR 2773
            L LN   +   PSL+  S   ++ Y+ +  P+I++SV+K+ QF+  P  HHW+A K++LR
Sbjct: 860  LQLNFYASKCDPSLFVYSHANNVIYILV--PEISFSVNKVCQFMSHPLTHHWAAVKRILR 917

Query: 2774 YLKGTQLLGITF--QASP-RMNLEAFADADW 2857
            YLKGT   G+     +SP  +++ A+ DADW
Sbjct: 918  YLKGTTSWGLRLLPASSPSSLSIHAYCDADW 948


>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1268

 Score =  405 bits (1041), Expect = e-120
 Identities = 217/459 (47%), Positives = 271/459 (59%), Gaps = 7/459 (1%)
 Frame = +1

Query: 100  PQVMAATT--YPTTDNSWYIDSGASAHVTSELGNLSLKSPYHGHDKLTVGNGSQLLISHT 273
            P  M A T      +++W  DSGAS HVT E  N+     + G D++ +GNG  L I+ +
Sbjct: 250  PSAMLANTPSQGAVNSTWIPDSGASFHVTGEPQNVHQLGHFDGPDQIFIGNGQGLHINGS 309

Query: 274  GXXXXXXXXXXXXXXXXXXXC-VPDITKNLLSISQFTKDNDVLIEFHDTFCLVKDKSTNQ 450
            G                     VP ITKNLLS+S+F KDN V  EFH   C VK + TN+
Sbjct: 310  GFSSFLSPIKSNFCFKLNDLLHVPSITKNLLSVSKFAKDNSVYFEFHSHCCFVKSQVTNE 369

Query: 451  ILLKGAL-KGGLYQLDLSHLSAPVKXXXXXXXXXXXXKQCNVVSTSSLDVWHQRLGHPCI 627
            ILL+G +   GLY      L  P                      SS   WH RL HP  
Sbjct: 370  ILLQGVVGSDGLYSFSNLELQGPSVLVSSSMASSVDPAVSAFAIPSSHTSWHTRLSHPNS 429

Query: 628  NTFASVMKHLHI-PFSCNKLSFCEACKVGKLHSISFPSIQSKSV--APFDLIYSDVWGPA 798
            +    V+ H +I P + N   FC +C VGK H +  PS+ S+SV  AP DLI++D+WGP+
Sbjct: 430  HVLKLVLNHCNIAPSNRNVSEFCSSCCVGKSHRL--PSLVSESVYSAPLDLIFTDLWGPS 487

Query: 799  ATPSCDGYKYYVHFLDEFTRFTWIFPLVSKSDVYTTVLNFISMIERQFSTKIKAFQCDWG 978
               S  GY YYV F+D F++FTWI+PL SKSD  +    F +M+E Q +TKIK+ Q DWG
Sbjct: 488  HVVSHSGYVYYVSFIDAFSKFTWIYPLKSKSDTLSVFQQFKAMVELQLNTKIKSIQSDWG 547

Query: 979  GEYRKLSSQFQSSGINFRHPCPHTHSQNGMPERKHQHIVDLGLTLLSQAQLPFKFWWDAF 1158
            GEYR  ++   + GI  R  CPHTH QNG+ ERKH+HIVD+G+TLL  A LP  FW  AF
Sbjct: 548  GEYRSFTAFLATHGITHRLICPHTHHQNGVVERKHRHIVDIGITLLHHASLPLTFWDYAF 607

Query: 1159 STATYLINILPTPVLHNISPFQKLLHRIPDYSFLKTFGCACFPYLRPYNNHKLQFRSSKC 1338
            STA YLIN LPT  L+   PF  L  + PDY FLKTFGCACFP+LRPY  HKL FRS +C
Sbjct: 608  STAVYLINRLPTASLNFDIPFTVLFKQTPDYKFLKTFGCACFPFLRPYTTHKLDFRSQEC 667

Query: 1339 IFLGYSPQHKGYKCLHPSGRVYIARTVAFNETDFPFSQL 1455
            +FLGYS  HKGYKCL  SG++YI++ V FNET FP+  L
Sbjct: 668  VFLGYSNSHKGYKCLSASGKIYISKDVIFNETRFPYLDL 706



 Score =  352 bits (904), Expect = e-101
 Identities = 178/341 (52%), Positives = 239/341 (70%), Gaps = 1/341 (0%)
 Frame = +2

Query: 1700 SMVTRSKNGIYKPKAFXXXXXXXXXXXXVCQALSDPGWKEAMELEFNALLKNHTWDLVPQ 1879
            SM TRSK+GIYKPK              V QALSDP W  AM+ E++ALL+NHTWDLVP 
Sbjct: 790  SMQTRSKSGIYKPKMPPSLFLAHSEPKNVKQALSDPDWFSAMKQEYSALLQNHTWDLVPL 849

Query: 1880 SADMNLISNKWVFKVKHKADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTIRIVF 2059
             ++   +  KWVF+VK  ADGS+ + KARLVA+GF Q+ G D+ ETFSPV+KP+TIRI+ 
Sbjct: 850  PSNRQAVGCKWVFRVKENADGSINKFKARLVAKGFHQVHGFDFHETFSPVIKPITIRIII 909

Query: 2060 SLAVSRGWSIQQVDINNAFLNGSLSQDVYMVQPEGFINPEKPTHVCKLAKALYGLKQAPR 2239
            +LA++  W + Q+D+NNAFLNG L + VYMVQP GF   E  + VCKL KALYG+KQAPR
Sbjct: 910  TLALTYNWHLFQLDVNNAFLNGILEETVYMVQPPGF-EVEDKSLVCKLNKALYGVKQAPR 968

Query: 2240 AWFEKLRDFLLSLQFCVSASDNSLFYLKSEGKLTLVLVYVDDILLTGDDSESVLELIQKL 2419
             WF++L+  LL   F  S  D SLF  K + ++  +LVYVDDI++TG  S+ + ++  +L
Sbjct: 969  QWFDRLKFTLLQFGFQASKCDPSLFMYKHQDQIIFLLVYVDDIIITGSSSQFIQQITDQL 1028

Query: 2420 HSTFSLKHMGEVNYFLGLEAHKLPG-GYLLNQSKYISDLLVKTNMVDCKPSPSPYCSGHK 2596
            +STFSLK +G+++YFLG+E   LP    L+ QSKYI DLL KT+M +  P  SP  SG K
Sbjct: 1029 NSTFSLKQLGQLDYFLGIEIKHLPDKSLLMTQSKYIRDLLHKTSMAEAHPISSPMLSGCK 1088

Query: 2597 LSLNDSPAFSLPSLYRSTIGSLQYLTMTRPDIAYSVHKLSQ 2719
            LS + +  F  P+LYRS +G+LQY T+TRP+I+++V+K+ Q
Sbjct: 1089 LSKSGADLFHDPTLYRSVVGALQYATLTRPEISFAVNKVCQ 1129


>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score =  399 bits (1025), Expect = e-119
 Identities = 197/389 (50%), Positives = 265/389 (68%), Gaps = 4/389 (1%)
 Frame = +2

Query: 1703 MVTRSKNGIYKP----KAFXXXXXXXXXXXXVCQALSDPGWKEAMELEFNALLKNHTWDL 1870
            +VTRSK+ I+KP                   V QAL DP W++AM  EF+ALL+N TWDL
Sbjct: 590  IVTRSKHNIHKPIQKXNLTAXLQQPTLEPTTVTQALKDPKWRQAMSAEFDALLRNGTWDL 649

Query: 1871 VPQSADMNLISNKWVFKVKHKADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTIR 2050
            VP     NL   KW+F+ K+  +GS++R KARLVA+GF Q PG  Y ETFSPV+KP T+R
Sbjct: 650  VPSHPXQNLXGCKWIFRTKYLPNGSIDRYKARLVAKGFHQXPGXXYSETFSPVIKPTTVR 709

Query: 2051 IVFSLAVSRGWSIQQVDINNAFLNGSLSQDVYMVQPEGFINPEKPTHVCKLAKALYGLKQ 2230
            +V SLAV +GWS++Q+D NN FL G+L++D +M QP GFI+ + P HVCKL KA+YGLKQ
Sbjct: 710  LVLSLAVXQGWSLRQLDXNNXFLQGTLTEDXFMSQPPGFIDRDHPHHVCKLRKAIYGLKQ 769

Query: 2231 APRAWFEKLRDFLLSLQFCVSASDNSLFYLKSEGKLTLVLVYVDDILLTGDDSESVLELI 2410
            APRAW+ +LR FLL   F  S  D SLF   + G +  +LV+VDDI++TG++ E+    I
Sbjct: 770  APRAWYHELRQFLLQFGFINSIVDTSLFIFNNHGTILYLLVHVDDIIITGNNVEAAQTFI 829

Query: 2411 QKLHSTFSLKHMGEVNYFLGLEAHKLPGGYLLNQSKYISDLLVKTNMVDCKPSPSPYCSG 2590
            Q+L   FSLK +G + YFLG+E      G  L+Q KYI+DLL +T+M + KP+P+P  + 
Sbjct: 830  QQLSQRFSLKDLGPLTYFLGVEVTSHTNGLFLSQHKYIADLLNRTHMTEAKPAPTPLATS 889

Query: 2591 HKLSLNDSPAFSLPSLYRSTIGSLQYLTMTRPDIAYSVHKLSQFLHAPTEHHWSACKKVL 2770
              L+L      S P+ YR+ +GSLQYL++TRPDIAY+V+KLSQF+H PT  HW+A K++L
Sbjct: 890  PILTLQSGTPLSNPTEYRTMVGSLQYLSLTRPDIAYTVNKLSQFMHQPTSDHWNAVKRLL 949

Query: 2771 RYLKGTQLLGITFQASPRMNLEAFADADW 2857
            RYL GT   GIT + +  + L  F+D+DW
Sbjct: 950  RYLCGTLDHGITLRRTSPLALHVFSDSDW 978



 Score =  182 bits (461), Expect = 2e-43
 Identities = 89/194 (45%), Positives = 125/194 (64%), Gaps = 1/194 (0%)
 Frame = +1

Query: 868  IFPLVSKSDVYTTVLNFISMIERQFSTKIKAFQCDWGGEYRKLSSQFQSSGINFRHPCPH 1047
            ++P   KSD +   ++F +++E+ F+  I     D GGEY+ LSS    +G++     PH
Sbjct: 315  LYPFKRKSDTHDVFVHFKALVEKFFNRPIITLYSDNGGEYQALSSFLTINGVSHLTSPPH 374

Query: 1048 THSQNGMPERKHQHIVDLGLTLLSQAQLPFKFWWDAFSTATYLINILPTPVLHNISPFQK 1227
            T   NG  ER+H+HIV+ GL+LL+ A +P  +W  AFST  YLIN LPTP L+++S + K
Sbjct: 375  TPEHNGYSERRHRHIVETGLSLLTHASMPLSYWPFAFSTTVYLINRLPTPTLNHLSSYFK 434

Query: 1228 LLHRIPDYSFLKTFGCACFPYLRPYNNHKLQFRSSKCIFLGYSPQHKGYKCLHPS-GRVY 1404
            L    P+YS L++FGC C+P+LRPY + KL+ RSS CIF+GYSP    Y CL  S  R+Y
Sbjct: 435  LFGTFPNYSKLRSFGCLCYPWLRPYTSPKLESRSSPCIFVGYSPTQSAYLCLDTSTARLY 494

Query: 1405 IARTVAFNETDFPF 1446
             +R V F E+ FPF
Sbjct: 495  TSRHVHFVESIFPF 508



 Score =  114 bits (286), Expect = 2e-22
 Identities = 75/198 (37%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
 Frame = +1

Query: 79  SQHSPSAP---QVMAATTYPTTDNSWYIDSGASAHVTSELGNLSLKSPYHGHDKLTVGNG 249
           SQ  P AP   Q    TT P  + +W +DSGAS HVT+ L NL+L SP+ G D++ +G+G
Sbjct: 132 SQSRPPAPWQAQANVTTTIPP-NTTWLLDSGASHHVTTNLHNLALHSPFDGTDEIMIGDG 190

Query: 250 SQLLISHTGXXXXXXXXXXXXXXXXXXXCVPDITKNLLSISQFTKDNDVLIEFHDTFCLV 429
             L ISHTG                   CVP + +NL+SISQF K N+  IEF  +   V
Sbjct: 191 FGLPISHTG--STSLTTPSHSFTLSNVLCVPTMKRNLISISQFCKSNNTSIEFLPSSFHV 248

Query: 430 KDKSTNQILLKGALKGGLYQLDLSHL-SAPVKXXXXXXXXXXXXKQCNVVSTSSLDVWHQ 606
           KD  T  ILL+G  K G+Y+  LS   S P+                     ++L  WH 
Sbjct: 249 KDLHTGAILLQGRTKDGVYEWPLSTTQSXPLIAFSSV--------------KTTLSEWHH 294

Query: 607 RLGHPCINTFASVMKHLH 660
           RLGHP ++ F ++M   H
Sbjct: 295 RLGHPSLSIFKNIMSSFH 312


>gb|KYP34165.1| Copia protein [Cajanus cajan]
          Length = 542

 Score =  382 bits (981), Expect = e-119
 Identities = 192/386 (49%), Positives = 264/386 (68%), Gaps = 1/386 (0%)
 Frame = +2

Query: 1703 MVTRSKNGIYKPKAFXXXXXXXXXXXXVCQALSDPGWKEAMELEFNALLKNHTWDLVPQS 1882
            MVTR+K GI+KPK +            V QAL    WK+AM+ E++ALLKN TWDLV   
Sbjct: 1    MVTRAKAGIFKPKVYLATTEPTN----VAQALEHKQWKQAMQAEYDALLKNCTWDLVSLP 56

Query: 1883 ADMNLISNKWVFKVKHKADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTIRIVFS 2062
             D   I+ KW+FK K+  DGS+ R KARLVARGF Q PGLDY +TFSPVV+P++IR+V +
Sbjct: 57   PDRKAITCKWIFKNKYSQDGSILRHKARLVARGFNQQPGLDYTDTFSPVVRPVSIRVVLA 116

Query: 2063 LAVSRGWSIQQVDINNAFLNGSLSQDVYMVQPEGFINPEKPTHVCKLAKALYGLKQAPRA 2242
            +AVS+GW I Q+D++NAFLNG L +++YM+QP+GF +   P  VCKL KA+YGLKQAPRA
Sbjct: 117  IAVSKGWPIHQIDVDNAFLNGDLKEEIYMLQPQGF-HQGSPNTVCKLRKAIYGLKQAPRA 175

Query: 2243 WFEKLRDFLLSLQFCVSASDNSLFYLKSEGKLTLVLVYVDDILLTGDDSESVLELIQKLH 2422
            WF+KL   L  L F  + SDNSLF   S      +LVYVDD+++T + + ++  LIQ LH
Sbjct: 176  WFQKLTLTLFRLGFIQAKSDNSLFISTSRTTSIYILVYVDDVIITSNSATAIRGLIQALH 235

Query: 2423 STFSLKHMGEVNYFLGLEAHK-LPGGYLLNQSKYISDLLVKTNMVDCKPSPSPYCSGHKL 2599
              F LK +G +++FLG+E H    GG  L+Q++Y++D+L + NM + +P  +P     KL
Sbjct: 236  QYFPLKDLGRLHHFLGIEVHSDNAGGVHLSQTRYVTDILDRLNMSNARPVKTPMAPASKL 295

Query: 2600 SLNDSPAFSLPSLYRSTIGSLQYLTMTRPDIAYSVHKLSQFLHAPTEHHWSACKKVLRYL 2779
            + + + A   PS YRS +G+LQYLT+TRPDIAY+V+KL QF+H P + HW A K++LRYL
Sbjct: 296  TNDGTEACQDPSQYRSIVGALQYLTITRPDIAYTVNKLCQFMHNPLDVHWKATKRLLRYL 355

Query: 2780 KGTQLLGITFQASPRMNLEAFADADW 2857
            KGT   G+ ++      + A+ D+DW
Sbjct: 356  KGTLHHGLHYKKFTDTEIYAYCDSDW 381


>gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 539

 Score =  381 bits (978), Expect = e-118
 Identities = 198/389 (50%), Positives = 263/389 (67%), Gaps = 4/389 (1%)
 Frame = +2

Query: 1703 MVTRSKNGIYKPKAFXXXXXXXXXXXXVCQALSDPGWKEAMELEFNALLKNHTWDLVPQS 1882
            M TRSK+GI+KPK +            V QAL DP W EAM+ E++ALLKN+TW LV   
Sbjct: 1    MQTRSKSGIHKPK-YPSVLLAQSEPKNVKQALKDPKWLEAMKQEYSALLKNNTWTLVQLP 59

Query: 1883 ADMNLISNKWVFKVKHKADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTIRIVFS 2062
             D N I  KWVF++K  +DGSV R KARLVA+GF Q PG D+ ETFSP++KP+TIR++ +
Sbjct: 60   PDRNAIGCKWVFRIKENSDGSVNRYKARLVAKGFLQQPGFDFNETFSPIIKPVTIRLILT 119

Query: 2063 LAVSRGWSIQQVDINNAFLNGSLSQDVYMVQPEGFINPEKPTHVCKLAKALYGLKQAPRA 2242
            LA+S  W I Q+D+NNAFLNGSL++ VYM QP GF  P+  T VCKL KALYGLKQAPR 
Sbjct: 120  LAISNHWDIHQLDVNNAFLNGSLNETVYMQQPPGFEVPDS-TLVCKLNKALYGLKQAPRQ 178

Query: 2243 WFEKLRDFLLSLQFCVSASDNSLFYLKSEGKLTLVLVYVDDILLTGDDSESVLELIQKLH 2422
            WFE+L+  LL   F  S  D SLF    +  +  +LVYVDDI++TG+  +   +LI +L+
Sbjct: 179  WFERLQYTLLQFGFKASKCDPSLFTYHMQSNIVYLLVYVDDIIITGNSFQFTQQLIDQLN 238

Query: 2423 STFSLKHMGEVNYFLGLEA-HKLPGGYLLNQSKYISDLLVKTNMVDCKPSPSPYCSGHKL 2599
            S FSLK +G+++YFLG+E  H   G  LL QSKYI DLL +TNM++     SP  S  KL
Sbjct: 239  SIFSLKQLGKLDYFLGIEVRHLQNGSVLLTQSKYIRDLLQRTNMLEANAISSPMVSSCKL 298

Query: 2600 SLNDSPAFSLPSLYRSTIGSLQYLTMTRPDIAYSVHKLSQFLHAPTEHHWSACKKVLRYL 2779
            S + S   +  + YRS +G+LQY T+TRP+++++V+K+ QF+  P E HW+A K++LRYL
Sbjct: 299  SKHGSDTLADSTFYRSVVGALQYATITRPELSFAVNKVCQFMAHPLESHWNAVKRILRYL 358

Query: 2780 KGTQLLGITFQAS---PRMNLEAFADADW 2857
            KGT   G+  Q +      +L A+ DADW
Sbjct: 359  KGTMFYGLHLQPARVHQPFSLYAYCDADW 387


>gb|KYP68414.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 603

 Score =  382 bits (980), Expect = e-118
 Identities = 198/436 (45%), Positives = 261/436 (59%), Gaps = 5/436 (1%)
 Frame = +1

Query: 109  MAATTYPTTDNSWYIDSGASAHVTSELGNLSLKSPYHGHDKLTVGNGSQLLISHTGXXXX 288
            M A++  +++N+WY DSGAS HVT+   N+   +P+ G D++ VGNG  L I+ TG    
Sbjct: 1    MIASSSSSSNNNWYPDSGASNHVTNVSQNIQQFTPFEGPDQIHVGNGQGLHINSTGVTTF 60

Query: 289  XXXXXXXXXXXXXXXC-VPDITKNLLSISQFTKDNDVLIEFHDTFCLVKDKSTNQILLKG 465
                             V  ITKNL+S+SQF+KDN V  EFH   CLVK + T ++LL+G
Sbjct: 61   HSPINPKFQFALNNLLFVLSITKNLISVSQFSKDNSVYFEFHPYICLVKSQDTKEVLLQG 120

Query: 466  AL-KGGLYQLDLSHLSAPVKXXXXXXXXXXXXKQCNVVSTSSLDVWHQRLGHPCINTFAS 642
            ++   GLYQ      +   +                  S  S   WH RLGHP ++    
Sbjct: 121  SVGPDGLYQFPALLPTPSTQSVQQVQPARSFSVNTAAKSYVSFATWHSRLGHPNVDVMKH 180

Query: 643  VMKHLHIPF-SCNKLSFCEACKVGKLHSISFPSIQSKSV--APFDLIYSDVWGPAATPSC 813
            V ++ +I   + NK  FC  C +GK H +  PS  SK V   PFDL+Y+D+WGPA   S 
Sbjct: 181  VSRNFNIQLVTNNKSDFCTPCCLGKSHRL--PSNLSKIVYNTPFDLVYNDLWGPAPVTST 238

Query: 814  DGYKYYVHFLDEFTRFTWIFPLVSKSDVYTTVLNFISMIERQFSTKIKAFQCDWGGEYRK 993
             GY+YYV F+D  TRFTWI+ L +K+  +     F +M+  Q+   IKA Q DWGGEYR 
Sbjct: 239  CGYQYYVTFVDAHTRFTWIYLLKNKAQTFNVFKQFHAMVNNQYHHPIKALQTDWGGEYRS 298

Query: 994  LSSQFQSSGINFRHPCPHTHSQNGMPERKHQHIVDLGLTLLSQAQLPFKFWWDAFSTATY 1173
             ++     GI  R  C HTH QNG+ ERKH+HIV+LGLTLL+QA+LP +FW  AF T  Y
Sbjct: 299  FTNYLNEVGIQHRLICRHTHHQNGVVERKHRHIVELGLTLLAQAELPMQFWDHAFLTGVY 358

Query: 1174 LINILPTPVLHNISPFQKLLHRIPDYSFLKTFGCACFPYLRPYNNHKLQFRSSKCIFLGY 1353
            LIN LP+  + N+ P+ KL H+ PDY  L+ FGC+CFP+LRPYN HKLQFRS +C+FLGY
Sbjct: 359  LINRLPSSSIQNVVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGY 418

Query: 1354 SPQHKGYKCLHPSGRV 1401
            S  HKGYKCL   GR+
Sbjct: 419  STSHKGYKCLAADGRL 434


>gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 538

 Score =  378 bits (970), Expect = e-117
 Identities = 196/389 (50%), Positives = 262/389 (67%), Gaps = 4/389 (1%)
 Frame = +2

Query: 1703 MVTRSKNGIYKPKAFXXXXXXXXXXXXVCQALSDPGWKEAMELEFNALLKNHTWDLVPQS 1882
            M TR+K GI KP+                QAL+   W  AM+ E+NALL N TW LV   
Sbjct: 1    MTTRAKAGIVKPRLQPTLLLTHIEPKNTKQALASDTWLAAMKQEYNALLNNGTWTLVSLP 60

Query: 1883 ADMNLISNKWVFKVKHKADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTIRIVFS 2062
             +   I  KWVF++K  +DG+V + KARLVA+GF Q  G DY ETFSPVVKP+TIR++ +
Sbjct: 61   PNKTAIGCKWVFRIKENSDGTVNKYKARLVAKGFHQQFGSDYNETFSPVVKPVTIRLILT 120

Query: 2063 LAVSRGWSIQQVDINNAFLNGSLSQDVYMVQPEGFINPEKPTHVCKLAKALYGLKQAPRA 2242
            LA++  WSIQQ+D+NNAFLNG+L ++VYM QP GF + +K T VCKL KA+YGLKQAPRA
Sbjct: 121  LALTHHWSIQQLDVNNAFLNGNLQEEVYMSQPPGFESSDK-TLVCKLHKAIYGLKQAPRA 179

Query: 2243 WFEKLRDFLLSLQFCVSASDNSLFYLKSEGKLTLVLVYVDDILLTGDDSESVLELIQKLH 2422
            WF+KL+  L  L F +S  D SLF    +  +  +LVYVDDI++TG++S ++  +I +L+
Sbjct: 180  WFDKLKTTLFQLNFQISKCDPSLFVYSHDNNVIYILVYVDDIIITGNNSSTLQNIIAQLN 239

Query: 2423 STFSLKHMGEVNYFLGLEAHKLPGGYL-LNQSKYISDLLVKTNMVDCKPSPSPYCSGHKL 2599
            S FSLK +G +++FLG+E      G L L QSKYI DLL +TNM +  P  SP  SG KL
Sbjct: 240  SAFSLKDLGRLDFFLGIEVKSNTDGSLTLTQSKYIRDLLNRTNMENSNPISSPMVSGCKL 299

Query: 2600 SLNDSPAFSLPSLYRSTIGSLQYLTMTRPDIAYSVHKLSQFLHAPTEHHWSACKKVLRYL 2779
            S   S  F   +LYRS +G+LQY T+TRP+I++SV+K+ QF+  P E HWSA K++LRYL
Sbjct: 300  SRTGSEKFLDVTLYRSVVGALQYATITRPEISFSVNKVCQFMSNPLEQHWSAVKRILRYL 359

Query: 2780 KGTQLLGITFQASPR---MNLEAFADADW 2857
            KGT  LG+  Q +P    +++ A+ DADW
Sbjct: 360  KGTMFLGLHLQPAPSNSPLSIRAYCDADW 388