BLASTX nr result

ID: Rehmannia27_contig00023505 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00023505
         (713 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011079561.1| PREDICTED: pentatricopeptide repeat-containi...   154   7e-40
ref|XP_012858814.1| PREDICTED: pentatricopeptide repeat-containi...   120   6e-28
ref|XP_012840511.1| PREDICTED: pentatricopeptide repeat-containi...   111   6e-25
ref|XP_012836536.1| PREDICTED: pentatricopeptide repeat-containi...   101   6e-22
ref|XP_012857709.1| PREDICTED: pentatricopeptide repeat-containi...   103   9e-22
ref|XP_012840513.1| PREDICTED: pentatricopeptide repeat-containi...    99   8e-21
gb|EYU46233.1| hypothetical protein MIMGU_mgv1a019022mg [Erythra...    88   1e-16
gb|EYU20478.1| hypothetical protein MIMGU_mgv1a021602mg, partial...    42   2e-07
ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
emb|CDO98040.1| unnamed protein product [Coffea canephora]             58   2e-06
ref|XP_008453445.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06

>ref|XP_011079561.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Sesamum indicum]
          Length = 618

 Score =  154 bits (388), Expect = 7e-40
 Identities = 83/160 (51%), Positives = 96/160 (60%)
 Frame = -1

Query: 482 MAFHLRNSRNLPLTKSTHHSXXXXXXXXXXXXXAELYSPNHGQTAALRGRRIQRKQIDGS 303
           MAFHLR SR L L++S   S             AEL+SP++ Q  ALRG  IQ KQ+DGS
Sbjct: 1   MAFHLRYSRKLTLSRSVLLSNLLAGNGGLFLGAAELHSPDYEQITALRGGGIQGKQVDGS 60

Query: 302 SLPVHFLFNSFAHSSFHRTHCQIPFILPHASSFPPLQKGLPLVRQQHFILCLNPDSLLCC 123
           SLP+ FLF++F  SS HRTHCQIPFILPH SS  PLQ+ LPL R+Q FILCL P + L C
Sbjct: 61  SLPLCFLFDAFTRSSLHRTHCQIPFILPHPSSLSPLQESLPLARRQDFILCLKPKTSLYC 120

Query: 122 LNKFRPFCKXXXXXXXXXXXXXXXXXXXXXXXSAKFETDQ 3
            NKFRPFCK                        A+FETDQ
Sbjct: 121 FNKFRPFCKDVDSARSDSDVETDGENESFVVDDAEFETDQ 160


>ref|XP_012858814.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Erythranthe guttata]
          Length = 611

 Score =  120 bits (302), Expect = 6e-28
 Identities = 70/129 (54%), Positives = 80/129 (62%), Gaps = 1/129 (0%)
 Frame = -1

Query: 482 MAFHLRNSRNLPLTKSTH-HSXXXXXXXXXXXXXAELYSPNHGQTAALRGRRIQRKQIDG 306
           MAFHLRNS+  PL+ ST  H+             A L+SP HGQ   LRGR +Q +QIDG
Sbjct: 1   MAFHLRNSKKSPLSASTQVHNFLAGDGGRPSLVAAGLHSPFHGQDTPLRGRGVQGEQIDG 60

Query: 305 SSLPVHFLFNSFAHSSFHRTHCQIPFILPHASSFPPLQKGLPLVRQQHFILCLNPDSLLC 126
           SSLPV+FL NSF  SS +RT CQIPF+LP+ SS  PLQK LP V     I   NP     
Sbjct: 61  SSLPVYFLLNSFTRSSINRTRCQIPFVLPYPSSLSPLQKCLPSV-----IPHQNPP---L 112

Query: 125 CLNKFRPFC 99
           CLNK RPFC
Sbjct: 113 CLNKIRPFC 121


>ref|XP_012840511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Erythranthe guttata]
          Length = 449

 Score =  111 bits (277), Expect = 6e-25
 Identities = 66/129 (51%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
 Frame = -1

Query: 482 MAFHLRNSRNLPLTKSTH-HSXXXXXXXXXXXXXAELYSPNHGQTAALRGRRIQRKQIDG 306
           MAFHLRNSR  PL+ ST  H              A L+SP HGQ   LRGR +QR++ DG
Sbjct: 1   MAFHLRNSRKSPLSASTQVHKFLAGDGGRPSLFAAGLHSPVHGQDTPLRGRGVQREKFDG 60

Query: 305 SSLPVHFLFNSFAHSSFHRTHCQIPFILPHASSFPPLQKGLPLVRQQHFILCLNPDSLLC 126
           SSLP++FL NSF  SS +RT CQIPF+LP+ SS   L+K LP +     I   NP     
Sbjct: 61  SSLPMYFLLNSFTRSSINRTRCQIPFVLPYPSSL-SLKKCLPAI-----IPHQNPP---L 111

Query: 125 CLNKFRPFC 99
           CLNK RPFC
Sbjct: 112 CLNKIRPFC 120


>ref|XP_012836536.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Erythranthe guttata]
          Length = 341

 Score =  101 bits (252), Expect = 6e-22
 Identities = 63/129 (48%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
 Frame = -1

Query: 482 MAFHLRNSRNLPLTKSTH-HSXXXXXXXXXXXXXAELYSPNHGQTAALRGRRIQRKQIDG 306
           MAFHLRNSR  PL+ ST  H              AEL+S  HGQ   LR R +QR+Q+D 
Sbjct: 1   MAFHLRNSRKSPLSASTQVHKFLAGDGGRLSLFAAELHSLVHGQDTPLRWRGVQREQVDV 60

Query: 305 SSLPVHFLFNSFAHSSFHRTHCQIPFILPHASSFPPLQKGLPLVRQQHFILCLNPDSLLC 126
           SSL ++FL N F  SS +RT CQIPF+LP+ SS  PL+K LP +     I   NP     
Sbjct: 61  SSLAMYFLLNYFTRSSINRTRCQIPFVLPYPSSL-PLKKCLPAI-----IPHQNPP---L 111

Query: 125 CLNKFRPFC 99
           CL K RPFC
Sbjct: 112 CLKKIRPFC 120


>ref|XP_012857709.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Erythranthe guttata]
          Length = 611

 Score =  103 bits (256), Expect = 9e-22
 Identities = 62/129 (48%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
 Frame = -1

Query: 482 MAFHLRNSRNLPLTKSTH-HSXXXXXXXXXXXXXAELYSPNHGQTAALRGRRIQRKQIDG 306
           MAFHLRNSR  PL+ ST  H+             A L SP H +   LRGR +Q +Q+DG
Sbjct: 1   MAFHLRNSRKSPLSASTQIHNFLAGDGGRPSLIAAGLRSPVHRKDTPLRGRGVQGEQVDG 60

Query: 305 SSLPVHFLFNSFAHSSFHRTHCQIPFILPHASSFPPLQKGLPLVRQQHFILCLNPDSLLC 126
           SSLPV+FL NSF  S+ +RT CQIP +LP+ SS  P+QK LPLV            S L 
Sbjct: 61  SSLPVYFLLNSFTCSNINRTRCQIPSVLPYPSSLSPIQKSLPLV------------SSLY 108

Query: 125 CLNKFRPFC 99
             NK R FC
Sbjct: 109 RSNKSRHFC 117


>ref|XP_012840513.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Erythranthe guttata]
          Length = 341

 Score = 98.6 bits (244), Expect = 8e-21
 Identities = 62/129 (48%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
 Frame = -1

Query: 482 MAFHLRNSRNLPLTKSTH-HSXXXXXXXXXXXXXAELYSPNHGQTAALRGRRIQRKQIDG 306
           MAFHLRNSR  PL+ ST  H              AEL+S  HGQ   LR R +QR+Q+D 
Sbjct: 1   MAFHLRNSRKSPLSASTQVHKFLAGDGGRPSLFAAELHSLVHGQDTPLRWRGVQREQVDV 60

Query: 305 SSLPVHFLFNSFAHSSFHRTHCQIPFILPHASSFPPLQKGLPLVRQQHFILCLNPDSLLC 126
           SSL ++FL N F  SS +RT CQIPF+LP+ SS   L+K LP +     I   NP     
Sbjct: 61  SSLAMYFLLNYFTRSSINRTRCQIPFVLPYPSSL-SLKKCLPAI-----IPHQNPP---L 111

Query: 125 CLNKFRPFC 99
           CL K RPFC
Sbjct: 112 CLKKIRPFC 120


>gb|EYU46233.1| hypothetical protein MIMGU_mgv1a019022mg [Erythranthe guttata]
          Length = 567

 Score = 88.2 bits (217), Expect = 1e-16
 Identities = 45/75 (60%), Positives = 48/75 (64%)
 Frame = -2

Query: 403 ADSSSAPPSYTLPITDKPRRYEGDEFKESKLTVAXXXXXXXXXXXXXXXXXXXXVKFRLF 224
           AD  S+PP YTLP TDK RRYE +EFKESKLTVA                    VKFRL+
Sbjct: 3   ADRHSSPPGYTLPSTDKTRRYEDEEFKESKLTVALCPCIFCLILLLVVASIVLVVKFRLY 62

Query: 223 CHTPLHSLLFKKACR 179
           CHTPLHSLLFK ACR
Sbjct: 63  CHTPLHSLLFKNACR 77


>gb|EYU20478.1| hypothetical protein MIMGU_mgv1a021602mg, partial [Erythranthe
           guttata]
          Length = 348

 Score = 41.6 bits (96), Expect(2) = 2e-07
 Identities = 25/54 (46%), Positives = 31/54 (57%)
 Frame = -1

Query: 260 SFHRTHCQIPFILPHASSFPPLQKGLPLVRQQHFILCLNPDSLLCCLNKFRPFC 99
           + +RT CQIPF+LP+  S   L+K LP +     I   NP     CLNK RPFC
Sbjct: 32  NINRTRCQIPFVLPYPCSL-SLKKCLPAI-----IPNQNPP---LCLNKIRPFC 76



 Score = 41.2 bits (95), Expect(2) = 2e-07
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = -2

Query: 400 DSSSAPPSYTLPITDKPRRYEGDEFKESKL 311
           D  S+P  YTLP TDK RRYEG+E KE  +
Sbjct: 4   DCHSSPQDYTLPSTDKTRRYEGEESKERNI 33


>ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Cucumis sativus]
           gi|700205883|gb|KGN61002.1| hypothetical protein
           Csa_2G034550 [Cucumis sativus]
          Length = 621

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
 Frame = -1

Query: 356 QTAALRGRRIQRK-QIDG-SSLPVHFLFNSFAHSSFHRTHCQIPFILPHASSFPPLQKGL 183
           +T   +GRR + K ++ G SSLP+  +F+S +H SFH +HCQIPFILP+ASSF   Q+ L
Sbjct: 30  RTMGRQGRRFRWKMRVPGCSSLPLFSMFDSPSHRSFHYSHCQIPFILPYASSFSVPQEKL 89

Query: 182 PLVRQQHFILCLNP 141
            +V     I   NP
Sbjct: 90  LIVSTLRTIDFRNP 103


>emb|CDO98040.1| unnamed protein product [Coffea canephora]
          Length = 651

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/54 (51%), Positives = 37/54 (68%)
 Frame = -1

Query: 338 GRRIQRKQIDGSSLPVHFLFNSFAHSSFHRTHCQIPFILPHASSFPPLQKGLPL 177
           GRR Q + ++GS LP+  L +S    S  RT+CQ+PFILPH +SF PLQ+ L L
Sbjct: 55  GRREQNQLLNGSPLPLSRLLHSPGDCSLRRTYCQVPFILPHPTSFFPLQENLSL 108


>ref|XP_008453445.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Cucumis melo]
          Length = 624

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
 Frame = -1

Query: 356 QTAALRGRRIQRK-QIDG-SSLPVHFLFNSFAHSSFHRTHCQIPFILPHASSFPPLQKGL 183
           +T   +GRR + K ++ G SS+P+  +F+S +H SFH +HCQIPFILP+ASSF   Q+ L
Sbjct: 30  RTMGRQGRRFRWKMRLPGCSSVPLFSMFDSRSHRSFHSSHCQIPFILPYASSFSVPQEKL 89

Query: 182 PLVRQQHFILCLNP 141
             V     I   NP
Sbjct: 90  LTVPPSRTIDFRNP 103


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