BLASTX nr result

ID: Rehmannia27_contig00023397 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00023397
         (953 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10805.1| hypothetical protein Ccrd_010789 [Cynara carduncu...    60   9e-08
ref|XP_010666994.1| PREDICTED: uncharacterized protein LOC104884...    62   3e-07
gb|KMS95688.1| hypothetical protein BVRB_005910 [Beta vulgaris s...    62   3e-07
gb|KVH88035.1| hypothetical protein Ccrd_024581 [Cynara carduncu...    57   8e-07
gb|KVI00976.1| hypothetical protein Ccrd_020767, partial [Cynara...    55   4e-06
gb|KVI07953.1| hypothetical protein Ccrd_013686 [Cynara carduncu...    58   7e-06

>gb|KVI10805.1| hypothetical protein Ccrd_010789 [Cynara cardunculus var. scolymus]
          Length = 135

 Score = 60.1 bits (144), Expect = 9e-08
 Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
 Frame = +1

Query: 178 RLPMPWRDSVNKINCGTFAIRHMKTYEGEGVRGWGCGL-QKGDAS--KISNLRSKYCHAI 348
           RL M W+   N  +CG FA+RHMKTY G+ VR W  GL Q+G     +I++LR KY   +
Sbjct: 35  RLRMDWQTQNNFDDCGVFAMRHMKTYIGD-VRTWKTGLAQEGKTQEIQIASLRMKYVAKL 93

Query: 349 AVDEYNEQRRKNLDKAKRFLTGEKVI 426
            V  YN+++   +++ ++F + +K I
Sbjct: 94  LVSNYNKKKEYVVNEVEKFQSMDKAI 119


>ref|XP_010666994.1| PREDICTED: uncharacterized protein LOC104884099 [Beta vulgaris
           subsp. vulgaris]
          Length = 381

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 26/75 (34%), Positives = 44/75 (58%)
 Frame = +1

Query: 181 LPMPWRDSVNKINCGTFAIRHMKTYEGEGVRGWGCGLQKGDASKISNLRSKYCHAIAVDE 360
           + MPWR ++N ++CG +A+RHM+TY  +    W CGL   +   +  LR +YC  +  D 
Sbjct: 302 IEMPWRSNMNTVDCGVYAMRHMETYHAQ--NNWDCGLYSDNFEGLKKLRIQYCIDLLTDN 359

Query: 361 YNEQRRKNLDKAKRF 405
            N++R +    A++F
Sbjct: 360 ANDKRVELQVLARKF 374


>gb|KMS95688.1| hypothetical protein BVRB_005910 [Beta vulgaris subsp. vulgaris]
          Length = 555

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 26/75 (34%), Positives = 44/75 (58%)
 Frame = +1

Query: 181 LPMPWRDSVNKINCGTFAIRHMKTYEGEGVRGWGCGLQKGDASKISNLRSKYCHAIAVDE 360
           + MPWR ++N ++CG +A+RHM+TY  +    W CGL   +   +  LR +YC  +  D 
Sbjct: 476 IEMPWRSNMNTVDCGVYAMRHMETYHAQ--NNWDCGLYSDNFEGLKKLRIQYCIDLLTDN 533

Query: 361 YNEQRRKNLDKAKRF 405
            N++R +    A++F
Sbjct: 534 ANDKRVELQVLARKF 548


>gb|KVH88035.1| hypothetical protein Ccrd_024581 [Cynara cardunculus var. scolymus]
          Length = 137

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
 Frame = +1

Query: 178 RLPMPWRDSVNKINCGTFAIRHMKTYEGEGVRGWGCGLQKGDAS---KISNLRSKYCHAI 348
           RL M W+   N  +CG FA+RHM+TY G+ VR W  GL K   +   +I++LR KY   +
Sbjct: 35  RLRMDWQTRNNFDDCGVFAVRHMETYMGD-VRTWNTGLSKEGKTQEIQIASLRMKYVAKL 93

Query: 349 AVDEYNEQRRKNLDKAKRF 405
            V  YN+++   + + ++F
Sbjct: 94  LVSNYNKKKEYVVKEVEKF 112


>gb|KVI00976.1| hypothetical protein Ccrd_020767, partial [Cynara cardunculus var.
           scolymus]
          Length = 133

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
 Frame = +1

Query: 178 RLPMPWRDSVNKINCGTFAIRHMKTYEGEGVRGWGCGL-QKGDAS--KISNLRSKYCHAI 348
           +L M W+   N  +CG FA+RHM+TY G+ VR W  GL Q+G     +I++LR KY   +
Sbjct: 35  KLRMDWQTQNNFDDCGVFAMRHMETYMGD-VRTWKTGLAQEGKTQEIQIASLRMKYVAXL 93

Query: 349 AVDEYNEQRRKNLDKAKRFLTGEKVI 426
            V  YN+++   + + ++F + ++ I
Sbjct: 94  LVSNYNKKKEYVVKEVEKFQSMDEAI 119


>gb|KVI07953.1| hypothetical protein Ccrd_013686 [Cynara cardunculus var. scolymus]
          Length = 661

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
 Frame = +1

Query: 178 RLPMPWRDSVNKINCGTFAIRHMKTYEGEGVRGWGCGL-QKGDAS--KISNLRSKYCHAI 348
           RL M W+   N  +CG FA+RHM+TY G+ VR W  GL Q+G     +I++LR KY   +
Sbjct: 559 RLRMDWQTQNNFDDCGVFAMRHMETYMGD-VRTWKTGLAQEGKTQEIQIASLRMKYVAKL 617

Query: 349 AVDEYNEQRRKNLDKAKRFLTGEKVI 426
            V  YN+++   + K ++F + ++ I
Sbjct: 618 LVSNYNKKKEYVVKKVEKFQSMDEAI 643


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