BLASTX nr result
ID: Rehmannia27_contig00022473
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia27_contig00022473 (1059 letters) Database: ./nr 84,704,028 sequences; 31,038,470,784 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|KYP48154.1| Retrovirus-related Pol polyprotein from transposo... 132 4e-40 gb|KYP50827.1| Retrovirus-related Pol polyprotein from transposo... 135 4e-35 gb|KYP36589.1| Retrovirus-related Pol polyprotein from transposo... 145 4e-35 gb|KYP64289.1| Retrovirus-related Pol polyprotein from transposo... 145 5e-35 gb|KYP64290.1| Retrovirus-related Pol polyprotein from transposo... 145 5e-35 gb|KYP54652.1| Retrovirus-related Pol polyprotein from transposo... 144 2e-34 emb|CAN82814.1| hypothetical protein VITISV_007061 [Vitis vinifera] 118 2e-34 gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 142 1e-33 emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 109 1e-33 gb|KYP65229.1| Retrovirus-related Pol polyprotein from transposo... 133 8e-33 gb|KYP66080.1| Retrovirus-related Pol polyprotein from transposo... 133 1e-32 emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera] 134 3e-31 gb|KYP59837.1| Retrovirus-related Pol polyprotein from transposo... 126 1e-30 emb|CAN62922.1| hypothetical protein VITISV_013519 [Vitis vinifera] 126 4e-29 gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ... 79 4e-29 gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s... 86 7e-29 emb|CAN73119.1| hypothetical protein VITISV_020442 [Vitis vinifera] 126 1e-28 emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group] 85 1e-28 gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja... 84 1e-28 ref|XP_002450473.1| hypothetical protein SORBIDRAFT_05g005866, p... 92 2e-28 >gb|KYP48154.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 223 Score = 132 bits (331), Expect(3) = 4e-40 Identities = 77/141 (54%), Positives = 94/141 (66%), Gaps = 9/141 (6%) Frame = -1 Query: 576 SVYVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAETNTFNVYTL* 397 S YVFTLG GAI + +QSII STME EF E+ S EAEWL+NFLA T Sbjct: 81 SGYVFTLGGGAIASRSVRQSIIARSTMESEFVALEMTSTEAEWLRNFLANIPLGMKPT-- 138 Query: 396 LPSSNYNC---------KE*NFNGKNKHVCLRYDVM*HLLKDGVISIDYVKSEENLANHL 244 PS + +C K ++NGKN+H+ LR++++ LLKDG ISI+YVKSE NLA+ L Sbjct: 139 -PSVSIHCDNQSAIAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVKSEGNLADPL 197 Query: 243 TKLLGRKLITETSRGMRLKPI 181 TK LGRK+I ETSRGM LKPI Sbjct: 198 TKPLGRKMIYETSRGMGLKPI 218 Score = 55.8 bits (133), Expect(3) = 4e-40 Identities = 27/44 (61%), Positives = 34/44 (77%) Frame = -2 Query: 758 VYRLSIYTYNPNRGNCTVLVRLMKYLRGTMNYGILYSGFHSVLE 627 V RL+ YT+ PN+ + L RLM+YLRGTM+YGI YSGF +VLE Sbjct: 20 VSRLNRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLE 63 Score = 26.9 bits (58), Expect(3) = 4e-40 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -3 Query: 811 IIGSLLHLMNFSR 773 IIGSLLHLM FSR Sbjct: 1 IIGSLLHLMKFSR 13 >gb|KYP50827.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 188 Score = 135 bits (341), Expect = 4e-35 Identities = 77/141 (54%), Positives = 94/141 (66%), Gaps = 9/141 (6%) Frame = -1 Query: 576 SVYVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAETNTFNVYTL* 397 S YVFTLG GAI W+ +QSII STME EF E+ S E EWL+NFLA T Sbjct: 40 SGYVFTLGGGAISWRSVRQSIIARSTMESEFVALEMTSTETEWLRNFLANIPLGMKPT-- 97 Query: 396 LPSSNYNC---------KE*NFNGKNKHVCLRYDVM*HLLKDGVISIDYVKSEENLANHL 244 PS + +C K ++NGKN+H+ LR++++ LLKDG ISI+YVKSE NLA+ L Sbjct: 98 -PSMSIHCDNHSAIAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVKSEGNLADPL 156 Query: 243 TKLLGRKLITETSRGMRLKPI 181 TK LGRK+I ETSRGM LKPI Sbjct: 157 TKPLGRKMIYETSRGMGLKPI 177 >gb|KYP36589.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 655 Score = 145 bits (365), Expect = 4e-35 Identities = 107/270 (39%), Positives = 144/270 (53%), Gaps = 23/270 (8%) Frame = -1 Query: 921 VKKSGHFNVKPVSISYDVNTQLKENLVDHVAHLSMHRLLGVCCI**IFHV------DITC 760 +KK +++ K V+ YDVN+QLK+N D +A +++G + H+ DI Sbjct: 393 LKKFDYYDCKYVTTPYDVNSQLKQNKGDSLAQSQYAQIIGS-----LLHLMNFSRPDIAY 447 Query: 759 CVSIEHIYI*SQSW*LYCLSQTN-EILERYHE-----LWYSIQWISL--CVRVXXXXXXX 604 VS Y +C +Q + E L R + Y I++ + Sbjct: 448 AVSRLSRYT-------HCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWI 500 Query: 603 XXXXXXXSASVYVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAET 424 S S YVFTLG GAI W+ +QSII STME EF E+ S EAEWL+NFLA Sbjct: 501 SDSDETKSTSYYVFTLGGGAISWRSVRQSIIARSTMESEFVALEMTSTEAEWLRNFLANI 560 Query: 423 NTFNVYTL*LPSSNYNC---------KE*NFNGKNKHVCLRYDVM*HLLKDGVISIDYVK 271 T PS + +C K ++NGKN+H+ LR++++ LLKDG ISI+YVK Sbjct: 561 PLGMKPT---PSVSIHCDNQSAIAIAKNKSYNGKNRHIQLRHNIVKKLLKDGTISINYVK 617 Query: 270 SEENLANHLTKLLGRKLITETSRGMRLKPI 181 SE NLA+ LTK LGRK+I ETSRGM LKPI Sbjct: 618 SEGNLADPLTKPLGRKMIYETSRGMGLKPI 647 >gb|KYP64289.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 1012 Score = 145 bits (367), Expect = 5e-35 Identities = 106/270 (39%), Positives = 144/270 (53%), Gaps = 23/270 (8%) Frame = -1 Query: 921 VKKSGHFNVKPVSISYDVNTQLKENLVDHVAHLSMHRLLGVCCI**IFHV------DITC 760 +KK +++ K V+ YDVN+QLK+N D +A +++G + H+ DI Sbjct: 747 LKKFDYYDCKSVTTPYDVNSQLKQNKGDSLAQSQYAQIIGS-----LLHLMNFSRPDIAY 801 Query: 759 CVSIEHIYI*SQSW*LYCLSQTN-EILERYHE-----LWYSIQWISLCVRVXXXXXXXXX 598 VS Y +C +Q + E L R + Y I++ + Sbjct: 802 AVSRLSRYT-------HCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWI 854 Query: 597 XXXXXSASV--YVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAET 424 + S YVFTLG GAI W+ +QSII STME EF E+ S EAEWL+NFLA Sbjct: 855 SDSDETKSTSGYVFTLGGGAIAWRSVRQSIIARSTMESEFVALEMTSTEAEWLRNFLANI 914 Query: 423 NTFNVYTL*LPSSNYNC---------KE*NFNGKNKHVCLRYDVM*HLLKDGVISIDYVK 271 T PS + +C K ++NGKN+H+ LR++++ LLKDG ISI+YVK Sbjct: 915 PLGMKPT---PSVSIHCDNQSAIAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVK 971 Query: 270 SEENLANHLTKLLGRKLITETSRGMRLKPI 181 SE NLA+ LTK LGRK+I ETSRGM LKPI Sbjct: 972 SEGNLADPLTKPLGRKMIYETSRGMGLKPI 1001 Score = 70.1 bits (170), Expect = 1e-09 Identities = 43/92 (46%), Positives = 56/92 (60%) Frame = -3 Query: 1048 VGEASVILSVKIIRNDDIIMLTQEHYVEKLLKKFGHFYDKTLS*EIWTFQCQTCEYFL*C 869 +GEASVIL VK++R D I+L+Q HYVE+LLKKF ++ K++ T Y + Sbjct: 717 MGEASVILGVKVVRKGDSILLSQGHYVERLLKKFDYYDCKSV----------TTPYDVNS 766 Query: 868 QYSIXXXXXXXXXSFEYAQIIGSLLHLMNFSR 773 Q + +YAQIIGSLLHLMNFSR Sbjct: 767 Q--LKQNKGDSLAQSQYAQIIGSLLHLMNFSR 796 >gb|KYP64290.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1215 Score = 145 bits (367), Expect = 5e-35 Identities = 106/270 (39%), Positives = 144/270 (53%), Gaps = 23/270 (8%) Frame = -1 Query: 921 VKKSGHFNVKPVSISYDVNTQLKENLVDHVAHLSMHRLLGVCCI**IFHV------DITC 760 +KK +++ K V+ YDVN+QLK+N D +A +++G + H+ DI Sbjct: 950 LKKFDYYDCKSVTTPYDVNSQLKQNKGDSLAQSQYAQIIGS-----LLHLMNFSRPDIAY 1004 Query: 759 CVSIEHIYI*SQSW*LYCLSQTN-EILERYHE-----LWYSIQWISLCVRVXXXXXXXXX 598 VS Y +C +Q + E L R + Y I++ + Sbjct: 1005 AVSRLSRYT-------HCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWI 1057 Query: 597 XXXXXSASV--YVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAET 424 + S YVFTLG GAI W+ +QSII STME EF E+ S EAEWL+NFLA Sbjct: 1058 SDSDETKSTSGYVFTLGGGAIAWRSVRQSIIARSTMESEFVALEMTSTEAEWLRNFLANI 1117 Query: 423 NTFNVYTL*LPSSNYNC---------KE*NFNGKNKHVCLRYDVM*HLLKDGVISIDYVK 271 T PS + +C K ++NGKN+H+ LR++++ LLKDG ISI+YVK Sbjct: 1118 PLGMKPT---PSVSIHCDNQSAIAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVK 1174 Query: 270 SEENLANHLTKLLGRKLITETSRGMRLKPI 181 SE NLA+ LTK LGRK+I ETSRGM LKPI Sbjct: 1175 SEGNLADPLTKPLGRKMIYETSRGMGLKPI 1204 >gb|KYP54652.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 900 Score = 144 bits (362), Expect = 2e-34 Identities = 105/270 (38%), Positives = 143/270 (52%), Gaps = 23/270 (8%) Frame = -1 Query: 921 VKKSGHFNVKPVSISYDVNTQLKENLVDHVAHLSMHRLLGVCCI**IFHV------DITC 760 +KK +++ K V+ YDVN+QLK+N D +A +++G + H+ DI Sbjct: 635 LKKFDYYDCKSVTTPYDVNSQLKQNKGDSLAQSQYAQIIGS-----LLHLMNFSRPDIAY 689 Query: 759 CVSIEHIYI*SQSW*LYCLSQTN-EILERYHE-----LWYSIQWISLCVRVXXXXXXXXX 598 VS Y +C +Q + E L R + Y I++ + Sbjct: 690 AVSRLSRYT-------HCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWI 742 Query: 597 XXXXXSASV--YVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAET 424 + S YVFTLG GAI W+ +QSII STME EF E+ S EAEWL+NFL Sbjct: 743 SDSDETKSTSGYVFTLGGGAIAWRSVRQSIIARSTMESEFVALEMTSTEAEWLRNFLENI 802 Query: 423 NTFNVYTL*LPSSNYNC---------KE*NFNGKNKHVCLRYDVM*HLLKDGVISIDYVK 271 T PS + +C K ++NGKN+H+ LR++++ LLKDG ISI+YVK Sbjct: 803 PLGMKPT---PSVSIHCDNQSAIAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVK 859 Query: 270 SEENLANHLTKLLGRKLITETSRGMRLKPI 181 SE NLA+ LTK LGRK+I ETSRGM LKPI Sbjct: 860 SEGNLADPLTKPLGRKMIYETSRGMGLKPI 889 Score = 70.1 bits (170), Expect = 1e-09 Identities = 43/92 (46%), Positives = 56/92 (60%) Frame = -3 Query: 1048 VGEASVILSVKIIRNDDIIMLTQEHYVEKLLKKFGHFYDKTLS*EIWTFQCQTCEYFL*C 869 +GEASVIL VK++R D I+L+Q HYVE+LLKKF ++ K++ T Y + Sbjct: 605 MGEASVILGVKVVRKGDSILLSQGHYVERLLKKFDYYDCKSV----------TTPYDVNS 654 Query: 868 QYSIXXXXXXXXXSFEYAQIIGSLLHLMNFSR 773 Q + +YAQIIGSLLHLMNFSR Sbjct: 655 Q--LKQNKGDSLAQSQYAQIIGSLLHLMNFSR 684 >emb|CAN82814.1| hypothetical protein VITISV_007061 [Vitis vinifera] Length = 653 Score = 118 bits (296), Expect(2) = 2e-34 Identities = 64/132 (48%), Positives = 87/132 (65%), Gaps = 6/132 (4%) Frame = -1 Query: 576 SVYVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAETNTFNVYTL* 397 S YVF LG A+ WK KQ+ IT S ME EF E S+EA+WL+N LA+ + T+ Sbjct: 296 SGYVFILGGSAVFWKSVKQTCITQSAMEAEFIALEKTSSEAKWLRNLLADIPLWTRPTMS 355 Query: 396 L------PSSNYNCKE*NFNGKNKHVCLRYDVM*HLLKDGVISIDYVKSEENLANHLTKL 235 + ++ K FNGKNKH+CLR++++ HLL+ GVIS+++V S+ NLAN LTKL Sbjct: 356 VFMCCDSQAAIAKVKSKIFNGKNKHICLRHNIVLHLLETGVISLEFVMSKLNLANPLTKL 415 Query: 234 LGRKLITETSRG 199 L +KL+ ETSRG Sbjct: 416 LNKKLLEETSRG 427 Score = 56.2 bits (134), Expect(2) = 2e-34 Identities = 25/42 (59%), Positives = 35/42 (83%) Frame = -2 Query: 752 RLSIYTYNPNRGNCTVLVRLMKYLRGTMNYGILYSGFHSVLE 627 RLS YT +PN+ + T++ R++KYLRGT+NYG+ +SGF SVLE Sbjct: 237 RLSRYTQSPNQDHRTIVRRVLKYLRGTINYGLCFSGFPSVLE 278 >gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] Length = 1290 Score = 142 bits (357), Expect = 1e-33 Identities = 100/264 (37%), Positives = 145/264 (54%), Gaps = 17/264 (6%) Frame = -1 Query: 921 VKKSGHFNVKPVSISYDVNTQLKENLVDHVAHLSMHRLLGVCCI**IFHVDITCCVSIEH 742 +KK G+++ K VS YD N++LK+N + ++ +++G + H+ I + Sbjct: 1025 LKKFGYYDFKSVSTPYDANSKLKKNRGESISQTQYAQIIGS-----LLHLMSFSRPDIAY 1079 Query: 741 IYI*SQSW*LYCLSQTN-EILERYHE-----LWYSIQWISLCVRVXXXXXXXXXXXXXXS 580 + S C SQ + E L R + + Y+I++ + + Sbjct: 1080 A-VGRLSRCTQCPSQDHWEALARLMKYLRGTMDYAIEYSGFPAVLEGYSDANWISDSDET 1138 Query: 579 ASV--YVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAETNTFNVY 406 S YVFTLG GA+ W+ A+Q+II STME EF E+A +EAEWLKNFLA Sbjct: 1139 KSTSGYVFTLGGGAVTWRSARQTIIARSTMESEFVALEMAGSEAEWLKNFLANIPLGMKP 1198 Query: 405 TL*LPSSNYNC---------KE*NFNGKNKHVCLRYDVM*HLLKDGVISIDYVKSEENLA 253 T PS + +C K ++NGKN+H+ LR++++ LLK G ISIDYVKSE +LA Sbjct: 1199 T---PSVSMHCDCQSAIAIAKNKSYNGKNRHIQLRHNLVKQLLKSGTISIDYVKSERDLA 1255 Query: 252 NHLTKLLGRKLITETSRGMRLKPI 181 + LTK LGRK+I ETSRGM LKP+ Sbjct: 1256 DPLTKPLGRKMILETSRGMGLKPL 1279 Score = 69.3 bits (168), Expect = 3e-09 Identities = 43/92 (46%), Positives = 55/92 (59%) Frame = -3 Query: 1048 VGEASVILSVKIIRNDDIIMLTQEHYVEKLLKKFGHFYDKTLS*EIWTFQCQTCEYFL*C 869 +GEASVIL VKIIR D I+L+QE Y EKLLKKFG++ K++S + + Sbjct: 995 MGEASVILGVKIIRKGDSILLSQEKYTEKLLKKFGYYDFKSVS---TPYDANS------- 1044 Query: 868 QYSIXXXXXXXXXSFEYAQIIGSLLHLMNFSR 773 + +YAQIIGSLLHLM+FSR Sbjct: 1045 --KLKKNRGESISQTQYAQIIGSLLHLMSFSR 1074 >emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] Length = 1277 Score = 109 bits (273), Expect(3) = 1e-33 Identities = 61/143 (42%), Positives = 89/143 (62%), Gaps = 9/143 (6%) Frame = -1 Query: 576 SVYVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAETNTFNVYTL* 397 S YVFTLG A+ WK +KQ +I STME EF + EAEWL++FL + ++ Sbjct: 1138 SGYVFTLGGAAVSWKSSKQXVIARSTMESEFIALDKCGEEAEWLRHFLEDIPRWSKP--- 1194 Query: 396 LPSSNYNCKE*N---------FNGKNKHVCLRYDVM*HLLKDGVISIDYVKSEENLANHL 244 +P +C + +NGK++H+ R++ + LL GVIS+DYVKS++N+A+ L Sbjct: 1195 VPPICIHCDSQSAIGRAQSNMYNGKSRHIXRRHNTIRQLLSTGVISVDYVKSKDNIADPL 1254 Query: 243 TKLLGRKLITETSRGMRLKPI*E 175 TK L R+L+ ++SRGM LKPI E Sbjct: 1255 TKGLNRELVEKSSRGMXLKPIKE 1277 Score = 42.7 bits (99), Expect(3) = 1e-33 Identities = 32/92 (34%), Positives = 47/92 (51%) Frame = -3 Query: 1048 VGEASVILSVKIIRNDDIIMLTQEHYVEKLLKKFGHFYDKTLS*EIWTFQCQTCEYFL*C 869 +G A VIL +KI R + ++L+Q HYV+K+L KF DK S T T Sbjct: 991 MGLADVILGIKIKRTSBELILSQSHYVDKILGKF----DKDNSGVARTPVDVTLH----- 1041 Query: 868 QYSIXXXXXXXXXSFEYAQIIGSLLHLMNFSR 773 + EY++IIGSL++LM+ +R Sbjct: 1042 ---LSKNKGESVSQVEYSRIIGSLMYLMSCTR 1070 Score = 40.4 bits (93), Expect(3) = 1e-33 Identities = 19/44 (43%), Positives = 30/44 (68%) Frame = -2 Query: 758 VYRLSIYTYNPNRGNCTVLVRLMKYLRGTMNYGILYSGFHSVLE 627 V +LS YT NP + ++R++KYLR T +YG+ Y+ + +VLE Sbjct: 1077 VSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLE 1120 >gb|KYP65229.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 322 Score = 133 bits (335), Expect = 8e-33 Identities = 99/268 (36%), Positives = 140/268 (52%), Gaps = 21/268 (7%) Frame = -1 Query: 921 VKKSGHFNVKPVSISYDVNTQLKENLVDHVAHLSMHRLLGVCCI**IFHV------DITC 760 +KK +++ K V+ YDVN+ LK+N + +A +++G + H+ DI Sbjct: 57 LKKFDYYDCKSVTTPYDVNSPLKQNKGESLAQSQYAQIIGS-----LLHLMNFSRPDIAY 111 Query: 759 CVSIEHIYI*SQSW*LYCLSQTN-EILERYHE-----LWYSIQWISLCVRVXXXXXXXXX 598 VS Y +C +Q + E L R + Y I++ + Sbjct: 112 AVSRLSRYT-------HCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWI 164 Query: 597 XXXXXSASV--YVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAET 424 + S YVFTLG GAI W+ +QSII STME EF E+ S EAEWL+NFLA Sbjct: 165 SNSDETKSTSGYVFTLGGGAIAWRSVRQSIIARSTMESEFVALEMTSTEAEWLRNFLANI 224 Query: 423 NTFNVYTL*LPSSNYN-------CKE*NFNGKNKHVCLRYDVM*HLLKDGVISIDYVKSE 265 + S +Y+ K ++NGKN+H+ LR+++ +LKDG ISI+YVKS+ Sbjct: 225 -PLGMKPTPSVSIHYDNQSAIAISKNKSYNGKNRHIQLRHNIAKQMLKDGTISINYVKSK 283 Query: 264 ENLANHLTKLLGRKLITETSRGMRLKPI 181 NL + LTK LGRK+I ETSRGM LKPI Sbjct: 284 GNLEDPLTKPLGRKMIYETSRGMGLKPI 311 Score = 67.4 bits (163), Expect = 4e-09 Identities = 41/92 (44%), Positives = 54/92 (58%) Frame = -3 Query: 1048 VGEASVILSVKIIRNDDIIMLTQEHYVEKLLKKFGHFYDKTLS*EIWTFQCQTCEYFL*C 869 +GEASVIL VK++R D I+L+Q HYVE+ LKKF ++ K++ T Y + Sbjct: 27 MGEASVILGVKVVRKGDSILLSQGHYVERFLKKFDYYDCKSV----------TTPYDV-- 74 Query: 868 QYSIXXXXXXXXXSFEYAQIIGSLLHLMNFSR 773 + +YAQIIGSLLHLMNFSR Sbjct: 75 NSPLKQNKGESLAQSQYAQIIGSLLHLMNFSR 106 >gb|KYP66080.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 316 Score = 133 bits (334), Expect = 1e-32 Identities = 75/139 (53%), Positives = 94/139 (67%), Gaps = 7/139 (5%) Frame = -1 Query: 576 SVYVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAETNTFNVYTL* 397 S YVFTLG GAI W+ +QSII STME EF E+ S EAEWL+NF+A + Sbjct: 168 SGYVFTLGGGAIAWRSVRQSIIARSTMESEFVALEMTSTEAEWLRNFVANI-PLEMKPTP 226 Query: 396 LPSSNYN-------CKE*NFNGKNKHVCLRYDVM*HLLKDGVISIDYVKSEENLANHLTK 238 S +Y+ K ++NGKN+H+ LR++++ LLKDG ISI+YVKSE NLA+ LTK Sbjct: 227 SVSIHYDNQSAIAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVKSEGNLADPLTK 286 Query: 237 LLGRKLITETSRGMRLKPI 181 LGRK+I ETSRGM LKPI Sbjct: 287 PLGRKMIYETSRGMGLKPI 305 >emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera] Length = 1096 Score = 134 bits (338), Expect = 3e-31 Identities = 97/269 (36%), Positives = 137/269 (50%), Gaps = 12/269 (4%) Frame = -1 Query: 921 VKKSGHFNVKPVSISYDVNTQLKENLVDHVAHLSMHRLLGVCCI**------IFHVDITC 760 ++K HF+ KPVS YD N+QLK+N VA + +++G I + D Sbjct: 844 LRKFEHFDCKPVSTPYDPNSQLKKNREHSVAQIEYAQIIGSLMYLMNYTRPDIAYADHWT 903 Query: 759 CVSIEHIYI*SQSW*LYCLSQTNEILERYHELWYSIQWISLCVRVXXXXXXXXXXXXXXS 580 V Y+ C S +LE + + WI S Sbjct: 904 VVRRVLKYLRGTINYGLCFSGFPSVLEGFSDA----NWI-------------LDSDEMKS 946 Query: 579 ASVYVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAETNTFNVYTL 400 S YVF LG A+ WK AKQ+ IT S ME +F E AS+E EWL+N L + + L Sbjct: 947 TSGYVFILGGSAVSWKSAKQTCITQSIMEAKFIALENASSEVEWLRNLLTDIPLWTRPAL 1006 Query: 399 *LP------SSNYNCKE*NFNGKNKHVCLRYDVM*HLLKDGVISIDYVKSEENLANHLTK 238 + ++ K FNGKN+H+CLR++++ LL+ GVIS+++V+S+ NLA+ LTK Sbjct: 1007 SMSICCDSQAAIAKAKSKIFNGKNRHICLRHNIVWQLLETGVISLEFVRSKLNLADSLTK 1066 Query: 237 LLGRKLITETSRGMRLKPI*EINSDGNLT 151 L +KL+ ETSRGM L PI E+ S GN T Sbjct: 1067 PLNKKLVEETSRGMGLMPITEVKSCGNPT 1095 Score = 62.0 bits (149), Expect = 6e-07 Identities = 39/92 (42%), Positives = 55/92 (59%) Frame = -3 Query: 1048 VGEASVILSVKIIRNDDIIMLTQEHYVEKLLKKFGHFYDKTLS*EIWTFQCQTCEYFL*C 869 +GEA VIL +KI R + + L+QEHYVEK+L+KF HF K +S T + Sbjct: 814 LGEAEVILGIKITRTPNGLKLSQEHYVEKILRKFEHFDCKPVS----TPYDPNSQLKKNR 869 Query: 868 QYSIXXXXXXXXXSFEYAQIIGSLLHLMNFSR 773 ++S+ EYAQIIGSL++LMN++R Sbjct: 870 EHSVAQ--------IEYAQIIGSLMYLMNYTR 893 >gb|KYP59837.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 258 Score = 126 bits (316), Expect = 1e-30 Identities = 100/261 (38%), Positives = 132/261 (50%), Gaps = 23/261 (8%) Frame = -1 Query: 894 KPVSISYDVNTQLKENLVDHVAHLSMHRLLGVCCI**IFHV------DITCCVSIEHIYI 733 K V+ YDVN+QLK+N D +A ++ G + H+ DI VS Y Sbjct: 2 KSVTTPYDVNSQLKQNKGDSLAQPQYAQITGS-----LLHLMNFSRPDIAYAVSRLSRYT 56 Query: 732 *SQSW*LYCLSQTN-EILERYHE-----LWYSIQWISL--CVRVXXXXXXXXXXXXXXSA 577 +C +Q + E L R + Y I++ + Sbjct: 57 -------HCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWISDSDETKYT 109 Query: 576 SVYVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAETNTFNVYTL* 397 S YVFTLG GAI + +QSII STME EF E+ S E EWL+NFLA T Sbjct: 110 SGYVFTLGGGAIARRSVRQSIIARSTMESEFVALEMTSTEVEWLRNFLANIPLGMKPT-- 167 Query: 396 LPSSNYNC---------KE*NFNGKNKHVCLRYDVM*HLLKDGVISIDYVKSEENLANHL 244 PS + +C K ++NGKN+H+ LR++++ LLKDG ISI+YVKSE NLA+ Sbjct: 168 -PSVSIHCDNQSAIAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVKSEGNLADPP 226 Query: 243 TKLLGRKLITETSRGMRLKPI 181 TK L RK+I ETSRGM LKPI Sbjct: 227 TKPLVRKMIYETSRGMGLKPI 247 >emb|CAN62922.1| hypothetical protein VITISV_013519 [Vitis vinifera] Length = 453 Score = 126 bits (316), Expect = 4e-29 Identities = 73/141 (51%), Positives = 94/141 (66%), Gaps = 6/141 (4%) Frame = -1 Query: 570 YVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAE----TNTFNVYT 403 YVF LG + WK AKQ+ IT STME EF E AS+EAEWL N LA+ T + + Sbjct: 207 YVFILGGSVVSWKSAKQTRITRSTMEAEFIALENASSEAEWLGNLLADIPLWTRPASFVS 266 Query: 402 L*LPSSNYNCKE*N--FNGKNKHVCLRYDVM*HLLKDGVISIDYVKSEENLANHLTKLLG 229 + S K + FNGKNKH+ LR+++M LLK GVIS+++V+SE NLA+HLTK L Sbjct: 267 MRCDSQAAIAKAKSKIFNGKNKHIRLRHNIMRQLLKIGVISLEFVRSELNLADHLTKPLN 326 Query: 228 RKLITETSRGMRLKPI*EINS 166 +KL+ ETSRGMRL PI ++ S Sbjct: 327 KKLVEETSRGMRLMPITKVKS 347 >gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays] Length = 1309 Score = 79.0 bits (193), Expect(3) = 4e-29 Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 10/141 (7%) Frame = -1 Query: 576 SVYVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAETNTFNVYTL* 397 S YVFTL GA+ W+ +KQS+ T ST E E + A+ EAEWL++ L++ + Sbjct: 1171 SGYVFTLAGGAVSWRSSKQSVSTRSTKEAELVALDSAALEAEWLRDLLSD---LPMLAKP 1227 Query: 396 LPSSNYNCKE*NF----------NGKNKHVCLRYDVM*HLLKDGVISIDYVKSEENLANH 247 +P+ C + ++H+ R D H + GVI++DY+KSE NLA+ Sbjct: 1228 IPAVLVYCDNTSVLLKVNSRKDNQKSSRHIRRRLDSCRHARETGVITVDYIKSERNLADP 1287 Query: 246 LTKLLGRKLITETSRGMRLKP 184 TK L +K I GM L P Sbjct: 1288 FTKGLAQKPIQAACMGMGLVP 1308 Score = 54.3 bits (129), Expect(3) = 4e-29 Identities = 31/92 (33%), Positives = 49/92 (53%) Frame = -3 Query: 1048 VGEASVILSVKIIRNDDIIMLTQEHYVEKLLKKFGHFYDKTLS*EIWTFQCQTCEYFL*C 869 +GEA VIL++K+I+ +D I L+Q HYVEK++ +FGH C+ Sbjct: 1024 LGEADVILNIKLIKGEDGITLSQSHYVEKVMTRFGH------------MDCKPVTTPYDP 1071 Query: 868 QYSIXXXXXXXXXSFEYAQIIGSLLHLMNFSR 773 Y++ Y+QIIGSL++L + +R Sbjct: 1072 SYTLSKYEGEPVNQLLYSQIIGSLMYLSSATR 1103 Score = 44.3 bits (103), Expect(3) = 4e-29 Identities = 21/44 (47%), Positives = 30/44 (68%) Frame = -2 Query: 758 VYRLSIYTYNPNRGNCTVLVRLMKYLRGTMNYGILYSGFHSVLE 627 V RL+ Y+ +P + L R+++YL+G MN GI Y+GF SVLE Sbjct: 1110 VCRLARYSASPGDRHWVALYRVLRYLKGAMNLGIKYTGFPSVLE 1153 >gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica Group] Length = 1911 Score = 85.5 bits (210), Expect(3) = 7e-29 Identities = 55/142 (38%), Positives = 78/142 (54%), Gaps = 10/142 (7%) Frame = -1 Query: 576 SVYVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAETNTFNVYTL* 397 S YVFTLG GA+ W+ KQ+I+T STME E T + A+ EAEWL++ L + V Sbjct: 1164 SGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMD---LPVVEKP 1220 Query: 396 LPSSNYNCKE*NF-----NGK-----NKHVCLRYDVM*HLLKDGVISIDYVKSEENLANH 247 +P+ NC N K ++HV R + L GVI++DY+++ NLA+ Sbjct: 1221 VPAILMNCDNQTVIVKVNNSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADP 1280 Query: 246 LTKLLGRKLITETSRGMRLKPI 181 TK L R +I S+ M L+PI Sbjct: 1281 FTKGLSRNVIDNASKEMGLRPI 1302 Score = 49.7 bits (117), Expect(3) = 7e-29 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 8/100 (8%) Frame = -3 Query: 1048 VGEASVILSVKIIRNDDIIMLTQEHYVEKLLKKFGHF--------YDKTLS*EIWTFQCQ 893 +G A VIL++K+IR ++ I L Q HYVEK+L +FG+ YD +LS Sbjct: 1017 LGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLS--------- 1067 Query: 892 TCEYFL*CQYSIXXXXXXXXXSFEYAQIIGSLLHLMNFSR 773 + EY+QIIGSL++L + +R Sbjct: 1068 -----------LRKNKRIARNQLEYSQIIGSLMYLASATR 1096 Score = 41.6 bits (96), Expect(3) = 7e-29 Identities = 19/44 (43%), Positives = 30/44 (68%) Frame = -2 Query: 758 VYRLSIYTYNPNRGNCTVLVRLMKYLRGTMNYGILYSGFHSVLE 627 V +LS +T NP + L R+M+YL+GT+ G+ Y+G+ +VLE Sbjct: 1103 VSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 1146 >emb|CAN73119.1| hypothetical protein VITISV_020442 [Vitis vinifera] Length = 588 Score = 126 bits (316), Expect = 1e-28 Identities = 99/288 (34%), Positives = 139/288 (48%), Gaps = 32/288 (11%) Frame = -1 Query: 918 KKSGHFNVKPVSISYDVNTQLKENLVDHVAHLSMHRLLGVCCI**IFHVDIT---CCVSI 748 KK HF+ KP+S YD N+QLK+N+ A + +++G ++ ++ T +I Sbjct: 324 KKFEHFDCKPMSTPYDPNSQLKKNMEHSXAQIEYAQIIGSL----MYLMNCTKPDIAYAI 379 Query: 747 EHIYI*SQS-----W*LY---------------CLSQTNEILERYHELWYSIQWISLCVR 628 + +QS W + C S +LE + + WIS Sbjct: 380 GRLSRNTQSPNQDHWTVVRRVLKYLRGTINYGLCFSGFPSVLEGFSDA----NWIS---- 431 Query: 627 VXXXXXXXXXXXXXXSASVYVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEW 448 S S YVF LG + WK AKQ+ I STME EF E S+EAEW Sbjct: 432 ---------DSDEMESTSGYVFILGGSLVSWKSAKQTYIARSTMEAEFIALEKISSEAEW 482 Query: 447 LKNFLAETNTFNVYTL*LPSSNYNC---------KE*NFNGKNKHVCLRYDVM*HLLKDG 295 L+N LA+ ++T PS + C K FNGKNKH+ L ++++ LL+ Sbjct: 483 LRNLLAD---IPLWTRLAPSMSMRCDSQATIAKAKSKIFNGKNKHIRLSHNIVWQLLESR 539 Query: 294 VISIDYVKSEENLANHLTKLLGRKLITETSRGMRLKPI*EINSDGNLT 151 VIS+++VKSE NL N TK L +KL+ ETSR M L PI E+ S N T Sbjct: 540 VISLEFVKSELNLVNPFTKPLNKKLVEETSREMGLMPIIEVKSGSNPT 587 >emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group] Length = 1319 Score = 85.1 bits (209), Expect(3) = 1e-28 Identities = 54/142 (38%), Positives = 77/142 (54%), Gaps = 10/142 (7%) Frame = -1 Query: 576 SVYVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAETNTFNVYTL* 397 S YVFTLG GA+ W+ KQ+I+T STME E T + A+ EAEWL++ L + V Sbjct: 1164 SGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMD---LPVVEKP 1220 Query: 396 LPSSNYNCKE*NFNGK----------NKHVCLRYDVM*HLLKDGVISIDYVKSEENLANH 247 +P+ NC K ++HV R + L GVI++DY+++ NLA+ Sbjct: 1221 VPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADP 1280 Query: 246 LTKLLGRKLITETSRGMRLKPI 181 TK L R +I S+ M L+PI Sbjct: 1281 FTKGLSRNVIDNASKEMGLRPI 1302 Score = 47.4 bits (111), Expect(3) = 1e-28 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 8/100 (8%) Frame = -3 Query: 1048 VGEASVILSVKIIRNDDIIMLTQEHYVEKLLKKFGHF--------YDKTLS*EIWTFQCQ 893 +G A VIL++K+IR ++ I L Q HYVEK+L +FG+ YD +L Sbjct: 1017 LGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL---------- 1066 Query: 892 TCEYFL*CQYSIXXXXXXXXXSFEYAQIIGSLLHLMNFSR 773 + EY+QIIGSL++L + +R Sbjct: 1067 ----------LLRKNKRIARNQLEYSQIIGSLMYLASATR 1096 Score = 43.1 bits (100), Expect(3) = 1e-28 Identities = 20/44 (45%), Positives = 31/44 (70%) Frame = -2 Query: 758 VYRLSIYTYNPNRGNCTVLVRLMKYLRGTMNYGILYSGFHSVLE 627 V +LS +T NP + VL R+M+YL+GT+ G+ Y+G+ +VLE Sbjct: 1103 VSKLSRFTSNPGDDHWRVLERVMRYLKGTVELGLHYTGYPAVLE 1146 >gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group] Length = 1302 Score = 84.3 bits (207), Expect(3) = 1e-28 Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 10/142 (7%) Frame = -1 Query: 576 SVYVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAETNTFNVYTL* 397 S YVFTLG GA+ W+ KQ+I+T STME E T + A+ EAEWL++ L + V Sbjct: 1164 SGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMD---LPVVEKP 1220 Query: 396 LPSSNYNCKE*NF-----NGK-----NKHVCLRYDVM*HLLKDGVISIDYVKSEENLANH 247 +P+ NC N K ++HV R + L GVI++DY+++ NLA+ Sbjct: 1221 VPAILMNCDNQTVIVKVNNSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADP 1280 Query: 246 LTKLLGRKLITETSRGMRLKPI 181 TK L R +I S+ M L+P+ Sbjct: 1281 FTKGLSRNVIDNASKEMGLRPM 1302 Score = 49.7 bits (117), Expect(3) = 1e-28 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 8/100 (8%) Frame = -3 Query: 1048 VGEASVILSVKIIRNDDIIMLTQEHYVEKLLKKFGHF--------YDKTLS*EIWTFQCQ 893 +G A VIL++K+IR ++ I L Q HYVEK+L +FG+ YD +LS Sbjct: 1017 LGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLS--------- 1067 Query: 892 TCEYFL*CQYSIXXXXXXXXXSFEYAQIIGSLLHLMNFSR 773 + EY+QIIGSL++L + +R Sbjct: 1068 -----------LRKNKRIARNQLEYSQIIGSLMYLASATR 1096 Score = 41.6 bits (96), Expect(3) = 1e-28 Identities = 19/44 (43%), Positives = 30/44 (68%) Frame = -2 Query: 758 VYRLSIYTYNPNRGNCTVLVRLMKYLRGTMNYGILYSGFHSVLE 627 V +LS +T NP + L R+M+YL+GT+ G+ Y+G+ +VLE Sbjct: 1103 VSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLE 1146 >ref|XP_002450473.1| hypothetical protein SORBIDRAFT_05g005866, partial [Sorghum bicolor] Length = 356 Score = 92.4 bits (228), Expect(3) = 2e-28 Identities = 56/141 (39%), Positives = 82/141 (58%), Gaps = 9/141 (6%) Frame = -1 Query: 576 SVYVFTLGEGAIIWKLAKQSIITNSTMEFEFTHFELASNEAEWLKNFLAETNTFNVYTL* 397 S Y+FTLG GA+ W+ KQ+I+T STME E T + AS EAEWL++ L + + Sbjct: 202 SGYIFTLGGGAVSWRSCKQTILTKSTMEAELTALDTASTEAEWLRDILMD---LPLVEKP 258 Query: 396 LPSSN-------YNCKE*NFNGK--NKHVCLRYDVM*HLLKDGVISIDYVKSEENLANHL 244 +P+SN K NGK +KH+ R + L + GVI++DY+++ +NLA+ Sbjct: 259 IPASNCDNQTVIIKVKNSQDNGKKSSKHIKRRLKSVRKLRRSGVIAVDYIQTAKNLADPF 318 Query: 243 TKLLGRKLITETSRGMRLKPI 181 TK L R +I S+ M L+PI Sbjct: 319 TKGLSRTVIDNASKEMGLRPI 339 Score = 43.5 bits (101), Expect(3) = 2e-28 Identities = 28/92 (30%), Positives = 44/92 (47%) Frame = -3 Query: 1048 VGEASVILSVKIIRNDDIIMLTQEHYVEKLLKKFGHFYDKTLS*EIWTFQCQTCEYFL*C 869 +GEA+VIL++K+ + ++ I L Q HYVEK+L FG C+ Sbjct: 55 LGEANVILNIKLNKGENGITLLQSHYVEKVLNHFGDM------------DCKPSPTSYDP 102 Query: 868 QYSIXXXXXXXXXSFEYAQIIGSLLHLMNFSR 773 + Y+QIIGSL++L + +R Sbjct: 103 SLILQKNKRLGKDHLRYSQIIGSLMYLASATR 134 Score = 39.7 bits (91), Expect(3) = 2e-28 Identities = 18/44 (40%), Positives = 30/44 (68%) Frame = -2 Query: 758 VYRLSIYTYNPNRGNCTVLVRLMKYLRGTMNYGILYSGFHSVLE 627 V +LS ++ NP +C + ++M+YL+GTM+Y I +S + VLE Sbjct: 141 VSKLSRFSSNPGSDHCHGIDQVMRYLKGTMSYAIHHSRYPGVLE 184