BLASTX nr result
ID: Rehmannia27_contig00022468
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00022468
(381 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83343.1| hypothetical protein VITISV_042274 [Vitis vinifera] 101 4e-24
gb|KYP36589.1| Retrovirus-related Pol polyprotein from transposo... 104 8e-24
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 102 1e-23
gb|KYP65229.1| Retrovirus-related Pol polyprotein from transposo... 101 1e-23
gb|KYP54650.1| Retrovirus-related Pol polyprotein from transposo... 100 2e-23
gb|KYP54652.1| Retrovirus-related Pol polyprotein from transposo... 103 2e-23
gb|KYP64289.1| Retrovirus-related Pol polyprotein from transposo... 103 2e-23
gb|KYP64290.1| Retrovirus-related Pol polyprotein from transposo... 103 2e-23
gb|KYP48154.1| Retrovirus-related Pol polyprotein from transposo... 99 2e-23
emb|CAN82056.1| hypothetical protein VITISV_010872 [Vitis vinifera] 97 2e-22
emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera] 100 4e-22
gb|KYP59837.1| Retrovirus-related Pol polyprotein from transposo... 96 8e-22
emb|CAN80986.1| hypothetical protein VITISV_030770 [Vitis vinifera] 96 9e-22
emb|CAN71009.1| hypothetical protein VITISV_002379 [Vitis vinifera] 92 2e-20
emb|CAH67291.1| OSIGBa0103O01.9 [Oryza sativa Indica Group] 95 3e-20
gb|ABA94723.1| retrotransposon protein, putative, Ty1-copia subc... 91 3e-20
emb|CAN73119.1| hypothetical protein VITISV_020442 [Vitis vinifera] 94 5e-20
gb|KYP46750.1| Retrovirus-related Pol polyprotein from transposo... 90 6e-20
gb|KYP73716.1| Retrovirus-related Pol polyprotein from transposo... 92 7e-20
emb|CAN72674.1| hypothetical protein VITISV_020404 [Vitis vinifera] 92 7e-20
>emb|CAN83343.1| hypothetical protein VITISV_042274 [Vitis vinifera]
Length = 229
Score = 101 bits (251), Expect = 4e-24
Identities = 46/73 (63%), Positives = 54/73 (73%)
Frame = +2
Query: 77 SNCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSEEFRGAKWISDLDEIKSTSVYIFTLGG 256
SN DHWT R++KYLRDT NYG+ Y GF SV E F A WISDLDE+KSTS Y+F L G
Sbjct: 137 SNQDHWTVVRRVLKYLRDTINYGLYYSGFPSVLEGFSDANWISDLDEMKSTSGYVFILSG 196
Query: 257 GEITWKSAKQTII 295
++WKSAKQT +
Sbjct: 197 SVVSWKSAKQTCV 209
>gb|KYP36589.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 655
Score = 104 bits (260), Expect = 8e-24
Identities = 56/99 (56%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 SLLHLMNFSS*HNLCCVSIEHIYI*S-NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSE 178
SLLHLMNFS VS Y N DHW A RLM+YLR T +YGI Y GF +V E
Sbjct: 433 SLLHLMNFSRPDIAYAVSRLSRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLE 492
Query: 179 EFRGAKWISDLDEIKSTSVYIFTLGGGEITWKSAKQTII 295
+ A WISD DE KSTS Y+FTLGGG I+W+S +Q+II
Sbjct: 493 GYSDANWISDSDETKSTSYYVFTLGGGAISWRSVRQSII 531
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 102 bits (253), Expect(2) = 1e-23
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 3/101 (2%)
Frame = +2
Query: 2 SLLHLMNFSS*HNLCCVSIEHIYI*SNC---DHWTAFVRLMKYLRDTTNYGILYGGFSSV 172
SLLHLM+FS ++ + + C DHW A RLMKYLR T +Y I Y GF +V
Sbjct: 1065 SLLHLMSFSRPD--IAYAVGRLSRCTQCPSQDHWEALARLMKYLRGTMDYAIEYSGFPAV 1122
Query: 173 SEEFRGAKWISDLDEIKSTSVYIFTLGGGEITWKSAKQTII 295
E + A WISD DE KSTS Y+FTLGGG +TW+SA+QTII
Sbjct: 1123 LEGYSDANWISDSDETKSTSGYVFTLGGGAVTWRSARQTII 1163
Score = 34.7 bits (78), Expect(2) = 1e-23
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +1
Query: 304 SMKTNFVVLGLADNEAKWLKYFLANI 381
+M++ FV L +A +EA+WLK FLANI
Sbjct: 1167 TMESEFVALEMAGSEAEWLKNFLANI 1192
>gb|KYP65229.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 322
Score = 101 bits (252), Expect = 1e-23
Identities = 55/99 (55%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 SLLHLMNFSS*HNLCCVSIEHIYI*S-NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSE 178
SLLHLMNFS VS Y N DHW A RLM+YLR T +YGI Y GF +V E
Sbjct: 97 SLLHLMNFSRPDIAYAVSRLSRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLE 156
Query: 179 EFRGAKWISDLDEIKSTSVYIFTLGGGEITWKSAKQTII 295
+ A WIS+ DE KSTS Y+FTLGGG I W+S +Q+II
Sbjct: 157 GYSDANWISNSDETKSTSGYVFTLGGGAIAWRSVRQSII 195
>gb|KYP54650.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 236
Score = 99.8 bits (247), Expect = 2e-23
Identities = 55/99 (55%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 SLLHLMNFSS*HNLCCVSIEHIYI*S-NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSE 178
SLLHLMNFS H VS Y S N +HW A RLM+YLR T +YGI Y GF V E
Sbjct: 74 SLLHLMNFSRPHIGYVVSRLSRYTHSPNQNHWEALARLMRYLRGTMDYGIEYSGFLVVLE 133
Query: 179 EFRGAKWISDLDEIKSTSVYIFTLGGGEITWKSAKQTII 295
A WIS+LDE KS+S Y+FTLGGG I W+S +++II
Sbjct: 134 GHSDANWISNLDETKSSSGYVFTLGGGAIAWRSVRKSII 172
>gb|KYP54652.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 900
Score = 103 bits (257), Expect = 2e-23
Identities = 56/99 (56%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 SLLHLMNFSS*HNLCCVSIEHIYI*S-NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSE 178
SLLHLMNFS VS Y N DHW A RLM+YLR T +YGI Y GF +V E
Sbjct: 675 SLLHLMNFSRPDIAYAVSRLSRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLE 734
Query: 179 EFRGAKWISDLDEIKSTSVYIFTLGGGEITWKSAKQTII 295
+ A WISD DE KSTS Y+FTLGGG I W+S +Q+II
Sbjct: 735 GYSDANWISDSDETKSTSGYVFTLGGGAIAWRSVRQSII 773
>gb|KYP64289.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1012
Score = 103 bits (257), Expect = 2e-23
Identities = 56/99 (56%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 SLLHLMNFSS*HNLCCVSIEHIYI*S-NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSE 178
SLLHLMNFS VS Y N DHW A RLM+YLR T +YGI Y GF +V E
Sbjct: 787 SLLHLMNFSRPDIAYAVSRLSRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLE 846
Query: 179 EFRGAKWISDLDEIKSTSVYIFTLGGGEITWKSAKQTII 295
+ A WISD DE KSTS Y+FTLGGG I W+S +Q+II
Sbjct: 847 GYSDANWISDSDETKSTSGYVFTLGGGAIAWRSVRQSII 885
>gb|KYP64290.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1215
Score = 103 bits (257), Expect = 2e-23
Identities = 56/99 (56%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 SLLHLMNFSS*HNLCCVSIEHIYI*S-NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSE 178
SLLHLMNFS VS Y N DHW A RLM+YLR T +YGI Y GF +V E
Sbjct: 990 SLLHLMNFSRPDIAYAVSRLSRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLE 1049
Query: 179 EFRGAKWISDLDEIKSTSVYIFTLGGGEITWKSAKQTII 295
+ A WISD DE KSTS Y+FTLGGG I W+S +Q+II
Sbjct: 1050 GYSDANWISDSDETKSTSGYVFTLGGGAIAWRSVRQSII 1088
>gb|KYP48154.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 223
Score = 99.0 bits (245), Expect = 2e-23
Identities = 55/99 (55%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 SLLHLMNFSS*HNLCCVSIEHIYI*S-NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSE 178
SLLHLM FS VS + Y N DHW A RLM+YLR T +YGI Y GF +V E
Sbjct: 4 SLLHLMKFSRPDIAYAVSRLNRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLE 63
Query: 179 EFRGAKWISDLDEIKSTSVYIFTLGGGEITWKSAKQTII 295
+ A WISDLDE KSTS Y+FTLGGG I +S +Q+II
Sbjct: 64 GYSDANWISDLDETKSTSGYVFTLGGGAIASRSVRQSII 102
>emb|CAN82056.1| hypothetical protein VITISV_010872 [Vitis vinifera]
Length = 257
Score = 97.4 bits (241), Expect = 2e-22
Identities = 47/82 (57%), Positives = 56/82 (68%)
Frame = +2
Query: 80 NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSEEFRGAKWISDLDEIKSTSVYIFTLGGG 259
N DHW + R++KYL+ T NYG+ Y GF SV E F A WISD DE+KSTS Y F LGG
Sbjct: 175 NQDHWASVRRVLKYLKGTINYGLCYNGFPSVLERFSDASWISDSDEMKSTSGYDFILGGS 234
Query: 260 EITWKSAKQTIIVTFL*RPTLL 325
++WKSAKQT I L R +LL
Sbjct: 235 AVSWKSAKQTYITLLLWRLSLL 256
>emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera]
Length = 1022
Score = 100 bits (248), Expect = 4e-22
Identities = 54/103 (52%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 SLLHLMNFSS*HNLCCVSIEHIYI*S-NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSE 178
SL++LMN + V YI S N DHWT R++KYLR T NYG+ + GF SV +
Sbjct: 903 SLMYLMNCTRPDIAYAVGRLSXYIQSPNQDHWTDVRRVLKYLRGTINYGLCFSGFPSVLK 962
Query: 179 EFRGAKWISDLDEIKSTSVYIFTLGGGEITWKSAKQTIIVTFL 307
F A WISDLDE+KSTS Y+F GG I+WKSAKQT I L
Sbjct: 963 GFSDANWISDLDEMKSTSEYVFIFGGSAISWKSAKQTCITRLL 1005
>gb|KYP59837.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 258
Score = 95.9 bits (237), Expect = 8e-22
Identities = 54/99 (54%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 SLLHLMNFSS*HNLCCVSIEHIYI*S-NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSE 178
SLLHLMNFS VS Y N DHW A RLM+YLR T +YGI Y GF +V E
Sbjct: 33 SLLHLMNFSRPDIAYAVSRLSRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLE 92
Query: 179 EFRGAKWISDLDEIKSTSVYIFTLGGGEITWKSAKQTII 295
+ A WISD DE K TS Y+FTLGGG I +S +Q+II
Sbjct: 93 GYSDANWISDSDETKYTSGYVFTLGGGAIARRSVRQSII 131
>emb|CAN80986.1| hypothetical protein VITISV_030770 [Vitis vinifera]
Length = 251
Score = 95.5 bits (236), Expect = 9e-22
Identities = 43/72 (59%), Positives = 52/72 (72%)
Frame = +2
Query: 80 NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSEEFRGAKWISDLDEIKSTSVYIFTLGGG 259
N DHWT R++KYLR T NYG+ + GF SV E F A WISD D++KSTS Y+FTLGG
Sbjct: 149 NQDHWTIVRRVLKYLRGTINYGLCFSGFPSVLEGFSDANWISDSDDMKSTSGYVFTLGGS 208
Query: 260 EITWKSAKQTII 295
++WKS KQT I
Sbjct: 209 AVSWKSTKQTCI 220
>emb|CAN71009.1| hypothetical protein VITISV_002379 [Vitis vinifera]
Length = 249
Score = 92.0 bits (227), Expect = 2e-20
Identities = 42/72 (58%), Positives = 51/72 (70%)
Frame = +2
Query: 80 NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSEEFRGAKWISDLDEIKSTSVYIFTLGGG 259
N DHWT R++KYLR T NYG+ + GF SV E F A WISD +E+KS S Y+F LGG
Sbjct: 177 NQDHWTTVRRVLKYLRGTINYGLCFNGFPSVFEGFSDANWISDSNEMKSISGYVFILGGS 236
Query: 260 EITWKSAKQTII 295
++WKSAKQT I
Sbjct: 237 AVSWKSAKQTCI 248
>emb|CAH67291.1| OSIGBa0103O01.9 [Oryza sativa Indica Group]
Length = 857
Score = 94.7 bits (234), Expect = 3e-20
Identities = 41/70 (58%), Positives = 53/70 (75%)
Frame = +2
Query: 86 DHWTAFVRLMKYLRDTTNYGILYGGFSSVSEEFRGAKWISDLDEIKSTSVYIFTLGGGEI 265
DHW A R+M+YL+ TT+YGI Y G+ V E + + WISD DEIK+TS Y+FTLGGG +
Sbjct: 765 DHWQALERVMRYLKGTTSYGIHYTGYPKVLEGYSDSNWISDADEIKATSGYVFTLGGGAV 824
Query: 266 TWKSAKQTII 295
+WKS KQTI+
Sbjct: 825 SWKSCKQTIL 834
>gb|ABA94723.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 208
Score = 90.5 bits (223), Expect = 3e-20
Identities = 38/70 (54%), Positives = 53/70 (75%)
Frame = +2
Query: 86 DHWTAFVRLMKYLRDTTNYGILYGGFSSVSEEFRGAKWISDLDEIKSTSVYIFTLGGGEI 265
DHW A R+M+YL+ T G+ Y G+ +V EE+ + WISD+DEIK+TS Y+FTLGGG +
Sbjct: 53 DHWRALERVMRYLKGTMELGLHYTGYPAVLEEYSDSNWISDVDEIKATSGYVFTLGGGVV 112
Query: 266 TWKSAKQTII 295
+W+S KQTI+
Sbjct: 113 SWRSCKQTIL 122
>emb|CAN73119.1| hypothetical protein VITISV_020442 [Vitis vinifera]
Length = 588
Score = 94.0 bits (232), Expect = 5e-20
Identities = 43/72 (59%), Positives = 52/72 (72%)
Frame = +2
Query: 80 NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSEEFRGAKWISDLDEIKSTSVYIFTLGGG 259
N DHWT R++KYLR T NYG+ + GF SV E F A WISD DE++STS Y+F LGG
Sbjct: 390 NQDHWTVVRRVLKYLRGTINYGLCFSGFPSVLEGFSDANWISDSDEMESTSGYVFILGGS 449
Query: 260 EITWKSAKQTII 295
++WKSAKQT I
Sbjct: 450 LVSWKSAKQTYI 461
>gb|KYP46750.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 219
Score = 90.1 bits (222), Expect = 6e-20
Identities = 52/99 (52%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 SLLHLMNFSS*HNLCCVSIEHIYI*S-NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSE 178
SLLHL N+S V Y + + HW RL KYL+ T NYGI Y + V E
Sbjct: 39 SLLHLSNYSRPDIAYVVGRLGRYTHNPDHSHWLTLERLFKYLKGTINYGIHYACYPIVIE 98
Query: 179 EFRGAKWISDLDEIKSTSVYIFTLGGGEITWKSAKQTII 295
F A WISD DE KSTS Y+FTL GG ITWK AKQTII
Sbjct: 99 GFSDANWISDSDETKSTSGYVFTLAGGAITWKFAKQTII 137
>gb|KYP73716.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 304
Score = 91.7 bits (226), Expect = 7e-20
Identities = 52/99 (52%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 SLLHLMNFSS*HNLCCVSIEHIYI*S-NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSE 178
SLLHL NFS V Y + + HW A RL +YL+ T NYGI Y + V E
Sbjct: 104 SLLHLSNFSRPDIAYAVGRLGRYTHNPDHSHWLALERLFRYLKGTVNYGIHYACYPVVIE 163
Query: 179 EFRGAKWISDLDEIKSTSVYIFTLGGGEITWKSAKQTII 295
F A WISD DE KSTS Y+FTL GG + WKSAKQTII
Sbjct: 164 GFCDANWISDSDETKSTSGYVFTLAGGAVAWKSAKQTII 202
>emb|CAN72674.1| hypothetical protein VITISV_020404 [Vitis vinifera]
Length = 366
Score = 92.4 bits (228), Expect = 7e-20
Identities = 48/99 (48%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 SLLHLMNFSS*HNLCCVSIEHIYI*S-NCDHWTAFVRLMKYLRDTTNYGILYGGFSSVSE 178
+L++LMN++ V Y S N DHWT R++KYLR T NYG+ + GF SV E
Sbjct: 225 NLMYLMNYTKPDIAYAVGRLSWYTQSPNQDHWTIVRRVLKYLRGTINYGLCFSGFPSVLE 284
Query: 179 EFRGAKWISDLDEIKSTSVYIFTLGGGEITWKSAKQTII 295
F A WIS+ DE+KST Y+F LGG ++WK AKQT I
Sbjct: 285 GFSDANWISNSDEMKSTKEYVFILGGSAVSWKYAKQTCI 323