BLASTX nr result
ID: Rehmannia27_contig00022354
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00022354
(3128 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera] 252 e-174
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia... 241 e-171
gb|KYP58728.1| Retrovirus-related Pol polyprotein from transposo... 216 e-160
gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposo... 218 e-158
gb|KYP34729.1| Retrovirus-related Pol polyprotein from transposo... 212 e-154
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo... 285 e-136
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo... 285 e-136
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo... 278 e-131
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 310 e-130
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 260 e-129
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo... 285 e-129
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo... 285 e-129
gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposo... 258 e-129
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera] 249 e-128
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 254 e-125
gb|KYP50571.1| Retrovirus-related Pol polyprotein from transposo... 244 e-125
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 243 e-124
gb|KYP74314.1| Retrovirus-related Pol polyprotein from transposo... 189 e-124
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 265 e-124
gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposo... 246 e-124
>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
Length = 1427
Score = 252 bits (644), Expect(4) = e-174
Identities = 118/259 (45%), Positives = 168/259 (64%), Gaps = 1/259 (0%)
Frame = +3
Query: 255 FCSDCAVSKSHKLPFANSSHKITEPLQLIPTDLWGPAPVQSSNGCSYNVAFVDDFTKFIW 434
FC C +KSHKLPF SS + L L+ +D+WGP+P++S +G Y + F+D FTK++W
Sbjct: 484 FCESCLCNKSHKLPFGVSSLRSRGXLDLVYSDVWGPSPIESIDGFRYYLIFIDYFTKYVW 543
Query: 435 IYFFKAKSDTQNAFLHFKNLVENQTNKRIKMVQSDGGTEFKPLIKTFSESGIIHKVSCPY 614
++ KSD F +K++VE N + + +DGGTE+K L F GI H+VS PY
Sbjct: 544 LFPMAYKSDVYTIFPKYKSMVEKYFNASLVTLYTDGGTEYKSLKSYFISQGIQHQVSPPY 603
Query: 615 TPQQNGTVERKHKHIIEVGLSLLSQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEA 794
TP+ G+ ERKH+H++E GL++L ++ +P K+W +F + YLIN +P + ++SPFE+
Sbjct: 604 TPEHVGSAERKHRHVVETGLAMLHKASLPLKYWSYAFLAAAYLINRLPTPILKHQSPFES 663
Query: 795 LYGHVPTYSHLRVFGCQCFPHLRPYNKNKLELRSQSSVFLGYSNQFKGYKIL-LPSGKVI 971
L+ H+P Y LR FGC CFP +RPY+ +KL+ RS+ VFLGYSN YK L L S +V
Sbjct: 664 LFQHMPNYDKLRAFGCLCFPWMRPYSDHKLDKRSKPCVFLGYSNTHNAYKCLDLSSNRVY 723
Query: 972 CSRDVVFNEHIFPFQQIST 1028
SR V F EH FPF +T
Sbjct: 724 ISRHVQFIEHKFPFASNTT 742
Score = 208 bits (529), Expect(4) = e-174
Identities = 117/282 (41%), Positives = 164/282 (58%), Gaps = 19/282 (6%)
Frame = +3
Query: 2082 DLGSLHFFLGIE-VNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 2258
DLG L +FLG+E T+ G+ L+Q +Y+ LLAK N+ G K +TPM S+ L+ G+
Sbjct: 1119 DLGPLSYFLGVEGAISTSDGMFLSQHQYVRDLLAKFNLEGIKDSSTPMSSTGHLTLNDGS 1178
Query: 2259 SFSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTDY 2438
+R +IG LQYL +T +I +AVNKL+Q+M P HW A K LL Y+ T
Sbjct: 1179 PPXNATQFRSLIGGLQYLQLTRLDIAFAVNKLAQFMHAPTQTHWTAAKRLLRYLKHTIHL 1238
Query: 2439 GL--------HLYH----SPHLLITGFADSD------DRKSTSGHCIFIGKNLICWSSKT 2564
GL HL +P L + ++D+D KST+ +F+G + I W SK
Sbjct: 1239 GLTFRRXQPLHLQAYSDVTPPLDLRAYSDADWAGDPDSYKSTTAFVLFLGGHPISWCSKK 1298
Query: 2565 QPTVSRSSAEAEYHSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQ 2744
Q TV+RSS EAEY ++A++ +V W+ LL EL I L Q P I+ DNLS ++ NP+
Sbjct: 1299 QKTVARSSTEAEYRAVASTAAEVTWVSHLLSELGITLQQSPTIYCDNLSATYLCVNPLFH 1358
Query: 2745 ARTKHVEIDLHFIRDKVQQKSDLVHHIHAHDQIADCFTKPLS 2870
+R KHV +D HF+R+KV S V H++ Q+AD TKPLS
Sbjct: 1359 SRMKHVALDYHFVREKVXDGSLKVSHVNTQSQLADVLTKPLS 1400
Score = 200 bits (509), Expect(4) = e-174
Identities = 119/307 (38%), Positives = 165/307 (53%), Gaps = 14/307 (4%)
Frame = +2
Query: 1082 HSQPLCTSQSLPNSPNTSSHHLSHNPPF----PLHSINIDXXXXXXXXXXXXXXXXQETR 1249
H P CT+ +S S +PP PL + +
Sbjct: 779 HQAPSCTNTGPNQELISSLSPTSSSPPTTASAPLSACDAPPRYDLSLSSLPVSFDSSNIS 838
Query: 1250 VEPISVTSPTPIQTAALPDNTLPPSNTHPILTRAKVGIFKPKSY----------SVALLT 1399
+S++ PT Q + N LP + H I+TR++ I PK + L
Sbjct: 839 SPSLSLSPPTQPQGS----NPLPEPS-HRIVTRSQNNIHCPKQFPDFKTSFHVTKHPLPX 893
Query: 1400 EMEPTNVLDALSNVKWKDAMLQEYTALMKNHTWDLTVLPPGKHVIGCRWVFKIKKNANGS 1579
+EPT AL + KW M E AL +N TW L P +++GC+WVF+IK+N +GS
Sbjct: 894 SLEPTTASQALKDPKWCAXMDDELAALARNCTWVLVPPPSNHNIVGCKWVFRIKRNPDGS 953
Query: 1580 FSRHKARLVAKGYTQIAGIDFTDVFSPVIKPATVRLVLTIALAKGWPIRQIDVDNAFLNG 1759
SR+KARLVAKG+ Q G+D+ D FSPV+KP T+R+VL+IAL+ W I Q+DV+N FL+G
Sbjct: 954 ISRYKARLVAKGFHQRPGVDYHDTFSPVVKPTTIRVVLSIALSNXWXISQLDVNNXFLHG 1013
Query: 1760 DLDKSTEIYMCQPPGFEVAGKSNLVCRLNKALYGLNQASKAWFDKLKTVLHSLGFSASKA 1939
L + ++YM QPPG+ VCRL KALYGL QA +AW+ +L+T L + GF SK
Sbjct: 1014 TL--TEDVYMAQPPGYVDQANPTHVCRLQKALYGLKQAPRAWYMELRTFLLTFGFINSKX 1071
Query: 1940 DTYLFFW 1960
DT LF +
Sbjct: 1072 DTSLFIY 1078
Score = 26.9 bits (58), Expect(4) = e-174
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 149 NRFSVRPFSYVVSSIKPLELWHKRLGHPS 235
N P VS L WH RLGHPS
Sbjct: 431 NTLGTSPKQACVSVKTSLANWHHRLGHPS 459
>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7267767|emb|CAB81170.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1515
Score = 241 bits (614), Expect(4) = e-171
Identities = 123/269 (45%), Positives = 172/269 (63%), Gaps = 8/269 (2%)
Frame = +3
Query: 258 CSDCAVSKSHKLPFANSSHKITEPLQLIPTDLWGPAPVQSSNGCSYNVAFVDDFTKFIWI 437
C C + K +LPF S + PL+ I DLWGPAPV S+ G Y V F+D++++F W
Sbjct: 489 CEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQYYVIFIDNYSRFTWF 548
Query: 438 YFFKAKSDTQNAFLHFKNLVENQTNKRIKMVQSDGGTEF--KPLIKTFSESGIIHKVSCP 611
Y K KSD + F+ F+ LVENQ +I M Q DGG EF + + GI +SCP
Sbjct: 549 YPLKLKSDFFSVFVLFQQLVENQYQHKIAMFQCDGGGEFVSYKFVAHLASCGIKQLISCP 608
Query: 612 YTPQQNGTVERKHKHIIEVGLSLLSQSGIPNKFWDDSFATSVYLIN*IPNKTI-NYKSPF 788
+TPQQNG ER+H+++ E+GLSL+ S +P+K W ++F TS +L N +P+ T+ + KSP+
Sbjct: 609 HTPQQNGIAERRHRYLTELGLSLMFHSKVPHKLWVEAFFTSNFLSNLLPSSTLSDNKSPY 668
Query: 789 EALYGHVPTYSHLRVFGCQCFPHLRPYNKNKLELRSQSSVFLGYSNQFKGYKIL-LPSGK 965
E L+G P Y+ LRVFG C+P+LRPY KNK + +S VFLGY+N++KGY+ L P+GK
Sbjct: 669 EMLHGTPPVYTALRVFGSACYPYLRPYAKNKFDPKSLLCVFLGYNNKYKGYRCLHPPTGK 728
Query: 966 VICSRDVVFNEHIFP----FQQISTLSSS 1040
V R V+F+E FP + Q T+S S
Sbjct: 729 VYICRHVLFDERKFPYSDIYSQFQTISGS 757
Score = 221 bits (563), Expect(4) = e-171
Identities = 118/294 (40%), Positives = 177/294 (60%), Gaps = 8/294 (2%)
Frame = +3
Query: 2082 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGNS 2261
D+G+LH+FLGI+ +Y G+ L+Q+KY LL MS M TP+ L QGN+
Sbjct: 1142 DMGALHYFLGIQAHYHNDGLFLSQEKYTSDLLVNAGMSDCSSMPTPLQ----LDLLQGNN 1197
Query: 2262 --FSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTD 2435
F +R++ G LQYLT+T P+I +AVN + Q M P + +K +LHY+ GT
Sbjct: 1198 KPFPEPTYFRRLAGKLQYLTLTRPDIQFAVNFVCQKMHAPTMSDFHLLKRILHYLKGTMT 1257
Query: 2436 YGLHLYHSPHLLITGFADSD------DRKSTSGHCIFIGKNLICWSSKTQPTVSRSSAEA 2597
G++L + ++ ++DSD R+ST G C F+G N+I WS+K PTVS+SS EA
Sbjct: 1258 MGINLSSNTDSVLRCYSDSDWAGCKDTRRSTGGFCTFLGYNIISWSAKRHPTVSKSSTEA 1317
Query: 2598 EYHSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEIDLH 2777
EY +L+ + ++V W+ LLQE+ +P Q P ++ DNLS V++S+NP + +R+KH ++D +
Sbjct: 1318 EYRTLSFAASEVSWIGFLLQEIGLPQQQIPEMYCDNLSAVYLSANPALHSRSKHFQVDYY 1377
Query: 2778 FIRDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKLQVAALSSLELRG 2939
++R++V + V HI A Q+AD FTK L F +R KL V LRG
Sbjct: 1378 YVRERVALGALTVKHIPASQQLADIFTKSLPQAPFCDLRFKLGVVLPPDTSLRG 1431
Score = 189 bits (481), Expect(4) = e-171
Identities = 114/343 (33%), Positives = 175/343 (51%), Gaps = 21/343 (6%)
Frame = +2
Query: 1013 STNQYTVLFSKFSTSTTNLNHESHSQPLCTSQSLPNSPNTSSHHLSHNPPFPLHSINIDX 1192
STN ++F ++T + + + P + + ++ H PP P+ S ++
Sbjct: 778 STNVEDIIFP---SATVSSSVPTGCAPNIAETATAPDVDVAAAHDMVVPPSPITSTSLPT 834
Query: 1193 XXXXXXXXXXXXXXXQETRVEPISVTSPTPIQTAALPDNTLPP------------SNTHP 1336
ET + S +P I + D+ PP +HP
Sbjct: 835 QPEESTSDQNHYSTDSETAIS--SAMTPQSINVSLFEDSDFPPLQSVISSTTAAPETSHP 892
Query: 1337 ILTRAKVGIFKPKSYSVALLTEM---EPTNVLDALSNVKWKDAMLQEYTALMKNHTWDLT 1507
++TRAK GI KP + EP +V +AL + W +AM +E + + TWDL
Sbjct: 893 MITRAKSGITKPNPKYALFSVKSNYPEPKSVKEALKDEGWTNAMGEEMGTMHETDTWDLV 952
Query: 1508 VLPPGKHVIGCRWVFKIKKNANGSFSRHKARLVAKGYTQIAGIDFTDVFSPVIKPATVRL 1687
++GC+WVFK K N++GS R KARLVA+GY Q G+D+ + +SPV++ ATVR
Sbjct: 953 PPEMVDRLLGCKWVFKTKLNSDGSLDRLKARLVARGYEQEEGVDYVETYSPVVRSATVRS 1012
Query: 1688 VLTIALAKGWPIRQIDVDNAFLNGDLDKSTEIYMCQPPGFEVAGKSNLVCRLNKALYGLN 1867
+L +A W ++Q+DV NAFL+ +L ++ ++M QPPGFE + + VC+L KA+Y L
Sbjct: 1013 ILHVATINKWSLKQLDVKNAFLHDELKET--VFMTQPPGFEDPSRPDYVCKLKKAIYDLK 1070
Query: 1868 QASKAWFDKLKTVLHSLGFSASKADTYLFFWI------FLCLY 1978
QA +AWFDK + L GF S +D LF ++ FL LY
Sbjct: 1071 QAPRAWFDKFSSYLLKYGFICSFSDPSLFVYLKGRDVMFLLLY 1113
Score = 26.6 bits (57), Expect(4) = e-171
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +2
Query: 203 ELWHKRLGHPS 235
E+WH+RLGHP+
Sbjct: 456 EVWHQRLGHPN 466
>gb|KYP58728.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1402
Score = 216 bits (550), Expect(3) = e-160
Identities = 114/280 (40%), Positives = 170/280 (60%), Gaps = 6/280 (2%)
Frame = +3
Query: 2082 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGNS 2261
DLG L +FLGIEV + GI ++Q+KY +L + ++ K + TPM + L QG
Sbjct: 1114 DLGPLRYFLGIEVAQSKSGIAISQRKYALDILEETGLTDCKPVDTPMDPNVKLMPNQGEP 1173
Query: 2262 FSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTDYG 2441
+S YR+++G L YLT+T P+I++ V+ +SQ++ P + HW AV +L YI + G
Sbjct: 1174 YSDPGRYRRLVGKLNYLTMTRPDISFPVSVVSQFLNSPCESHWLAVVRILRYIKRSPGKG 1233
Query: 2442 LHLYHSPHLLITGFADSD------DRKSTSGHCIFIGKNLICWSSKTQPTVSRSSAEAEY 2603
L H I G++D+D DR+STSG+C+F+G NL+ W SK Q V+RSS EAEY
Sbjct: 1234 LVYNDRGHTNIVGYSDADWAGDASDRRSTSGYCVFMGGNLVSWKSKKQSVVARSSTEAEY 1293
Query: 2604 HSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEIDLHFI 2783
++A + ++LWLK L+QEL+ + DN S +++SSNP+ RTKH+E+D HFI
Sbjct: 1294 RAMAHTTCELLWLKFLIQELQFCKVGHMELVCDNQSALYLSSNPVFHERTKHIEVDCHFI 1353
Query: 2784 RDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKL 2903
R+K+ + + +Q+AD FTK L G T + NKL
Sbjct: 1354 REKILSGIIKTSSVCSKNQLADIFTKSLRGPRITYICNKL 1393
Score = 213 bits (542), Expect(3) = e-160
Identities = 128/320 (40%), Positives = 168/320 (52%), Gaps = 18/320 (5%)
Frame = +2
Query: 1073 HESHSQPLCTSQSL--PNSPNT-SSHHLSHNPPFPLHSINIDXXXXXXXXXXXXXXXXQE 1243
H HS P T +L P+ P S H PLH I +
Sbjct: 775 HFDHSVPPTTPATLEAPDPPALPGSDH-------PLHRFGITYERRSHTVVPPNDSSIEP 827
Query: 1244 TRVEPISVTSPTPIQTA------ALPDNTLPPSNTHPILTRAKVGIFKPKSYSV--ALLT 1399
P SV+SPTP AL + N HPI P Y+ A+ +
Sbjct: 828 CDSTPASVSSPTPAPPTSVDLPIALRKGSRSTCNPHPIYNFLSYHRLSPTYYAFVSAIFS 887
Query: 1400 EMEPTNVLDALSNVKWKDAMLQEYTALMKNHTWDLTVLPPGKHVIGCRWVFKIKKNANGS 1579
P V +AL++ W+ AM+ E TAL NHTW L PPGK V+GCRWVF +K +G
Sbjct: 888 ITIPKTVQEALTHPGWRQAMIDEMTALDSNHTWVLVPPPPGKSVVGCRWVFNVKVGPDGQ 947
Query: 1580 FSRHKARLVAKGYTQIAGIDFTDVFSPVIKPATVRLVLTIALAKGWPIRQIDVDNAFLNG 1759
R KARLVAKGYTQ+ G+D++D FSPV K A+VRL L +A + WP+ Q+D+ NAFL+G
Sbjct: 948 VDRLKARLVAKGYTQVYGLDYSDTFSPVAKMASVRLFLAMAAMRHWPLFQLDIKNAFLHG 1007
Query: 1760 DLDKSTEIYMCQPPGFEVAGKSNLVCRLNKALYGLNQASKAWFDKLKTVLHSLGFSASKA 1939
DL++ EIYM QPPGF G S LVC+L K+LYGL Q+ +AWF + V+ G +
Sbjct: 1008 DLEE--EIYMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIRCET 1065
Query: 1940 DTYLFF-------WIFLCLY 1978
D +FF +I+L +Y
Sbjct: 1066 DHSVFFRRSSTHRFIYLVVY 1085
Score = 188 bits (478), Expect(3) = e-160
Identities = 115/296 (38%), Positives = 163/296 (55%), Gaps = 5/296 (1%)
Frame = +3
Query: 216 KDWVTLLLIIKFIFCSDCAVSKSHKLPFANS-SHKITEPLQLIPTDLWGPAPVQSSNGCS 392
K V L ++ + C C + K + F NS + + P +I +D+WGP+ + S G
Sbjct: 484 KKMVPHLSRLESLECESCQLGKHVRASFPNSINSRAMSPFDVIHSDVWGPSRIPSLLGHR 543
Query: 393 YNVAFVDDFTKFIWIYFFKAKSDTQNAFLHFKNLVENQTNKRIKMVQSDGGTE-FKPLIK 569
Y V F+DDF++ WI+ K +S+ N FL F + ++ Q K I++++SD E F K
Sbjct: 544 YYVTFIDDFSRCTWIFLMKNRSELFNIFLSFYSEIKTQFGKVIRILRSDNAKEYFSDCFK 603
Query: 570 TFSES-GIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQSGIPNKFWDDSFATSVYLI 746
+F S GI+H+ SCP+TPQQNG ERKH+HI++ +LL + P K W D+ T+ YLI
Sbjct: 604 SFMASHGILHQSSCPHTPQQNGVAERKHRHIVDTARTLLLNANAPPKLWGDAVLTAGYLI 663
Query: 747 N*IPNKTINYKSPFEALYGHVPTYS-HLRVFGCQCFPHLRPYNKNKLELRSQSSVFLGYS 923
N +P+ +N + P LY P YS H RVFGC CF H + KL R+ VFLGYS
Sbjct: 664 NRMPSSVLNDQVPHSLLYPLDPLYSVHPRVFGCTCFVHDLFSGRAKLSARAIKCVFLGYS 723
Query: 924 NQFKGYKILLP-SGKVICSRDVVFNEHIFPFQQISTLSSSQNSQPRQQILTMNPIP 1088
KGY+ P + + S DV F E F I+T S +S Q+L PIP
Sbjct: 724 RVQKGYRCYSPATHRFYTSADVTFFEDTPYF--IATDVSPVDSDLLSQVL---PIP 774
>gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1355
Score = 218 bits (555), Expect(4) = e-158
Identities = 115/282 (40%), Positives = 170/282 (60%), Gaps = 6/282 (2%)
Frame = +3
Query: 2082 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGNS 2261
DLG L +FLGIEV + GI ++Q+KY +L + ++ K + TPM + L QG
Sbjct: 1067 DLGPLRYFLGIEVAQSKSGIAISQRKYALDILEETGLTDCKPVDTPMDPNVKLMPNQGEP 1126
Query: 2262 FSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTDYG 2441
+ YR+++G L YLT+T P+I++ V+ +SQ++ P + HW AV +L YI + G
Sbjct: 1127 YPDPGRYRRLVGKLNYLTMTRPDISFPVSVVSQFLNSPCESHWLAVVRILRYIKRSPGKG 1186
Query: 2442 LHLYHSPHLLITGFADSD------DRKSTSGHCIFIGKNLICWSSKTQPTVSRSSAEAEY 2603
L H I G++D+D DR+STSG+C+F+G NL+ W SK Q V+RSS EAEY
Sbjct: 1187 LVYNDRGHTNIVGYSDADWAGDASDRRSTSGYCVFMGGNLVSWKSKKQSVVARSSTEAEY 1246
Query: 2604 HSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEIDLHFI 2783
++A + ++LWLK L+QEL+ + DN S +++SSNP+ RTKH+E+D HFI
Sbjct: 1247 RAMAHTTCELLWLKFLIQELQFCKVGHMELVCDNQSALYLSSNPVFHERTKHIEVDCHFI 1306
Query: 2784 RDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKLQV 2909
R+K+ + + DQ+AD FTK L G T + NKL V
Sbjct: 1307 REKILSDIIKTSSVCSKDQLADIFTKSLRGPRITYICNKLDV 1348
Score = 202 bits (514), Expect(4) = e-158
Identities = 124/320 (38%), Positives = 166/320 (51%), Gaps = 18/320 (5%)
Frame = +2
Query: 1073 HESHSQPLCTSQSL--PNSPNT-SSHHLSHNPPFPLHSINIDXXXXXXXXXXXXXXXXQE 1243
H HS P T +L P+ P S H PLH I +
Sbjct: 728 HFDHSVPPTTPATLEAPDPPALPGSDH-------PLHRFGITYERRSHTVVPPNDSSIEP 780
Query: 1244 TRVEPISVTSPTPIQTA------ALPDNTLPPSNTHPILTRAKVGIFKPKSYSV--ALLT 1399
P SV+SPTP AL + N HPI P Y+ A+ +
Sbjct: 781 CDSTPASVSSPTPAPPTSVDLPIALRKGSRSTCNPHPIYNFLSYHRLSPTYYAFVSAISS 840
Query: 1400 EMEPTNVLDALSNVKWKDAMLQEYTALMKNHTWDLTVLPPGKHVIGCRWVFKIKKNANGS 1579
P V +AL++ W+ AM+ E TAL NHTW L P K V+GC+WVF +K +G
Sbjct: 841 ITIPKTVQEALTHPGWRQAMIDEMTALDSNHTWVLVPPPLEKSVVGCQWVFNVKVGPDGQ 900
Query: 1580 FSRHKARLVAKGYTQIAGIDFTDVFSPVIKPATVRLVLTIALAKGWPIRQIDVDNAFLNG 1759
+R KARLVA GYTQ+ G+D++D FSPV K A+VRL L +A + WP+ Q+D+ NAFL+G
Sbjct: 901 VNRLKARLVANGYTQVYGLDYSDTFSPVAKMASVRLFLAMAAMRHWPLFQLDIKNAFLHG 960
Query: 1760 DLDKSTEIYMCQPPGFEVAGKSNLVCRLNKALYGLNQASKAWFDKLKTVLHSLGFSASKA 1939
DL++ EIYM QPPGF G S LVC+L K+LYGL Q+ +AWF + V+ G +
Sbjct: 961 DLEE--EIYMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIRCET 1018
Query: 1940 DTYLFF-------WIFLCLY 1978
D +FF +I+L +Y
Sbjct: 1019 DHSVFFRRSSTHRFIYLVVY 1038
Score = 187 bits (476), Expect(4) = e-158
Identities = 112/282 (39%), Positives = 157/282 (55%), Gaps = 5/282 (1%)
Frame = +3
Query: 258 CSDCAVSKSHKLPFANS-SHKITEPLQLIPTDLWGPAPVQSSNGCSYNVAFVDDFTKFIW 434
C C + K + F NS + + P +I +D+WGP+ + S G Y V F+DDF++ W
Sbjct: 451 CESCQLGKHVRASFPNSINSRAMSPFDVIHSDVWGPSRIPSLLGHRYYVTFIDDFSRCTW 510
Query: 435 IYFFKAKSDTQNAFLHFKNLVENQTNKRIKMVQSDGGTE-FKPLIKTFSES-GIIHKVSC 608
I+ K +S+ N FL F + ++ Q K I++++SD E F K+F S GI+H+ SC
Sbjct: 511 IFLMKNRSELFNIFLSFYSEIKTQFGKVIRILRSDNAKEYFSDCFKSFMASHGILHQSSC 570
Query: 609 PYTPQQNGTVERKHKHIIEVGLSLLSQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPF 788
P+TPQQNG ERKH+HI++ +LL + P K W D+ T+ YLIN +P+ +N + P
Sbjct: 571 PHTPQQNGVAERKHRHIVDTARTLLLNANAPPKLWGDAVLTAGYLINRMPSSVLNDQVPH 630
Query: 789 EALYGHVPTYS-HLRVFGCQCFPHLRPYNKNKLELRSQSSVFLGYSNQFKGYKILLP-SG 962
LY P YS H RVFGC CF H + KL R+ VFLGYS KGY+ P +
Sbjct: 631 SLLYPLDPLYSVHPRVFGCTCFVHDLFSGRAKLSARAIKCVFLGYSRVQKGYRCYSPATH 690
Query: 963 KVICSRDVVFNEHIFPFQQISTLSSSQNSQPRQQILTMNPIP 1088
+ S DV F E F I+T S +S Q+L PIP
Sbjct: 691 RFYTSADVTFFEDTPYF--IATDVSPVDSDLLSQVL---PIP 727
Score = 26.9 bits (58), Expect(4) = e-158
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 173 SYVVSSIKPLELWHKRLGHPSFD---NQVYFLFRLCSL 277
S + +SI+ L H+RLGHPS + V L RL SL
Sbjct: 412 STICASIESPGLIHRRLGHPSLNKLKKMVPHLSRLVSL 449
>gb|KYP34729.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1180
Score = 212 bits (540), Expect(3) = e-154
Identities = 128/320 (40%), Positives = 168/320 (52%), Gaps = 18/320 (5%)
Frame = +2
Query: 1073 HESHSQPLCTSQSL--PNSPNT-SSHHLSHNPPFPLHSINIDXXXXXXXXXXXXXXXXQE 1243
H HS P T +L P+ P S H PLH I +
Sbjct: 570 HFDHSVPPTTPATLEAPDPPALPGSDH-------PLHRFGITYERRSHTVVPPNDSSIEP 622
Query: 1244 TRVEPISVTSPTPIQTA------ALPDNTLPPSNTHPILTRAKVGIFKPKSYSV--ALLT 1399
P SV+SPTP AL + N HPI P Y+ A+ +
Sbjct: 623 CDSTPASVSSPTPAPPTSVDLPIALRKGSRSTCNPHPIYNFLSYHRLSPTYYAFVSAISS 682
Query: 1400 EMEPTNVLDALSNVKWKDAMLQEYTALMKNHTWDLTVLPPGKHVIGCRWVFKIKKNANGS 1579
P V +AL++ W+ AM+ E TAL NHTW L PPGK V+GCRWVF +K +G
Sbjct: 683 ITIPKTVQEALTHPGWRQAMIDEMTALDSNHTWVLVPPPPGKSVVGCRWVFNVKVGPDGQ 742
Query: 1580 FSRHKARLVAKGYTQIAGIDFTDVFSPVIKPATVRLVLTIALAKGWPIRQIDVDNAFLNG 1759
R KARLVAKGYTQ+ G+D++D FSPV K A+VRL L +A + WP+ Q+D+ NAFL+G
Sbjct: 743 VDRLKARLVAKGYTQVYGLDYSDTFSPVAKMASVRLFLAMAAMRHWPLFQLDIKNAFLHG 802
Query: 1760 DLDKSTEIYMCQPPGFEVAGKSNLVCRLNKALYGLNQASKAWFDKLKTVLHSLGFSASKA 1939
DL++ EIYM QPPGF G S LVC+L K+LYGL Q+ +AWF + V+ G +
Sbjct: 803 DLEE--EIYMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIRCET 860
Query: 1940 DTYLFF-------WIFLCLY 1978
D +FF +I+L +Y
Sbjct: 861 DHSVFFRRSSTHRFIYLVVY 880
Score = 202 bits (515), Expect(3) = e-154
Identities = 104/264 (39%), Positives = 159/264 (60%), Gaps = 6/264 (2%)
Frame = +3
Query: 2082 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGNS 2261
DLG L +FLGIEV + GI ++Q+KY +L + ++ K + TPM + L QG
Sbjct: 909 DLGPLRYFLGIEVAQSKSGIAISQRKYALDILEETGLTDCKPVDTPMDPNVKLMPNQGEP 968
Query: 2262 FSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTDYG 2441
+ YR+++G L YLT+T P+I++ V+ +SQ++ P + HW AV +L YI + G
Sbjct: 969 YPDPGRYRRLVGKLNYLTMTRPDISFPVSVVSQFLNSPCESHWLAVVRILRYIKRSPGKG 1028
Query: 2442 LHLYHSPHLLITGFADSD------DRKSTSGHCIFIGKNLICWSSKTQPTVSRSSAEAEY 2603
L H I G++D+D DR+STSG+C+F+G NL+ W SK Q ++RSS EAEY
Sbjct: 1029 LVYNDRGHTNIVGYSDADWAGDASDRRSTSGYCVFMGGNLVSWKSKKQSVIARSSTEAEY 1088
Query: 2604 HSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEIDLHFI 2783
++A + ++LWLK L+QE + + DN S +++SSNP+ RTKH+E+D HFI
Sbjct: 1089 RAMAHTTCELLWLKFLIQEFQFCKVGHMELVCDNQSALYLSSNPVFHERTKHIEVDCHFI 1148
Query: 2784 RDKVQQKSDLVHHIHAHDQIADCF 2855
R+K+ + + DQ+AD F
Sbjct: 1149 REKILSGIIKTSSVCSKDQLADIF 1172
Score = 183 bits (465), Expect(3) = e-154
Identities = 116/296 (39%), Positives = 161/296 (54%), Gaps = 5/296 (1%)
Frame = +3
Query: 216 KDWVTLLLIIKFIFCSDCAVSKSHKLPFANSSHKITEPL-QLIPTDLWGPAPVQSSNGCS 392
K V L ++ + C C + K + F NS + L +I +D+WGP+ V S G
Sbjct: 279 KKMVPHLSRLESLECESCQLGKHVRASFPNSVNSRAMCLFDVIHSDVWGPSRVPSLLGHR 338
Query: 393 YNVAFVDDFTKFIWIYFFKAKSDTQNAFLHFKNLVENQTNKRIKMVQSDGGTE-FKPLIK 569
Y V F+DDF++ WI+ K +S+ N FL F + ++ Q K I++++SD E F K
Sbjct: 339 YYVTFIDDFSRCTWIFLMKNRSELFNIFLSFYSEIKTQFGKVIRILRSDNAKEYFSDCFK 398
Query: 570 TFSES-GIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQSGIPNKFWDDSFATSVYLI 746
+F S GI+H+ SCP+TPQQNG ERKH+HI++ +LL + P K W D+ T+ YLI
Sbjct: 399 SFMASHGILHQSSCPHTPQQNGVAERKHRHIVDTARTLLLNANAPPKLWGDAVLTAGYLI 458
Query: 747 N*IPNKTINYKSPFEALYGHVPTYS-HLRVFGCQCFPHLRPYNKNKLELRSQSSVFLGYS 923
N +P+ +N + P LY P YS H RVFGC CF H KL R+ VFLGYS
Sbjct: 459 NRMPSSVLNDQVPHSLLYPLDPLYSVHPRVFGCTCFVHDLFSGSAKLSARAIKCVFLGYS 518
Query: 924 NQFKGYKILLP-SGKVICSRDVVFNEHIFPFQQISTLSSSQNSQPRQQILTMNPIP 1088
KGY+ P + + S DV F E F I+T S +S Q+L PIP
Sbjct: 519 RVQKGYRCYSPATHRFYTSADVTFFEDTPYF--IATDVSPVDSDLLSQVL---PIP 569
>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 262 bits (669), Expect(2) = e-136
Identities = 142/286 (49%), Positives = 187/286 (65%), Gaps = 10/286 (3%)
Frame = +3
Query: 2082 DLGSLHFFLGIEVNYTTQG-ILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 2258
DLG L FFLGIEV G ++LTQ KYI LL + +M GSK +++PM+S LSK
Sbjct: 1117 DLGDLDFFLGIEVKSQPDGSLILTQSKYIRDLLNRTDMEGSKPISSPMISGSKLSKVGSE 1176
Query: 2259 SFSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTDY 2438
F LYR ++G+LQY TIT PEI+++VNK+ Q+M PL HW AVK +L Y+ GTT +
Sbjct: 1177 DFLDASLYRSVVGALQYATITRPEISFSVNKVCQFMSHPLTHHWAAVKRILRYLKGTTSW 1236
Query: 2439 GLHLY---HSPHLLITGFADS------DDRKSTSGHCIFIGKNLICWSSKTQPTVSRSSA 2591
GL L S L I + D+ DDR+STSG IF+G NL+ W SK Q V+RSS
Sbjct: 1237 GLRLQPASSSSSLSIHAYCDADWASDPDDRRSTSGASIFLGPNLVSWWSKKQTVVARSST 1296
Query: 2592 EAEYHSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEID 2771
EAEY SLA + T+V W+++LL EL++ H P+I+ DNLS V ++ NP++ ARTKH+E+D
Sbjct: 1297 EAEYRSLALATTEVTWIQTLLSELKV-THSTPIIFCDNLSTVALAHNPVLHARTKHMELD 1355
Query: 2772 LHFIRDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKLQV 2909
L F+R+KV K V H+ A DQ AD TK LS F +R+KLQV
Sbjct: 1356 LFFVREKVAAKCLQVVHVPAIDQCADVLTKALSPTRFCELRSKLQV 1401
Score = 254 bits (649), Expect(2) = e-136
Identities = 126/235 (53%), Positives = 161/235 (68%)
Frame = +2
Query: 1256 PISVTSPTPIQTAALPDNTLPPSNTHPILTRAKVGIFKPKSYSVALLTEMEPTNVLDALS 1435
P +++ PT + P N HP+ TRAK GI KP+ LLT++EP ALS
Sbjct: 845 PSTLSIPTSSNLEPSSSPIIHPHNVHPMTTRAKDGIVKPRLQPTLLLTQVEPKTTKQALS 904
Query: 1436 NVKWKDAMLQEYTALMKNHTWDLTVLPPGKHVIGCRWVFKIKKNANGSFSRHKARLVAKG 1615
N W AM EY AL+ N+TW L LPP + IGC+WVF++K+N NGS ++KARLVAKG
Sbjct: 905 NPTWSAAMQTEYNALLHNNTWSLVPLPPHRTAIGCKWVFRVKENPNGSVQKYKARLVAKG 964
Query: 1616 YTQIAGIDFTDVFSPVIKPATVRLVLTIALAKGWPIRQIDVDNAFLNGDLDKSTEIYMCQ 1795
+ Q G D+ + FSPVIKP TVRL+LT+AL WPI+Q+DV+NAFLNG L++ E+YM Q
Sbjct: 965 FNQQFGFDYHETFSPVIKPVTVRLILTLALTHRWPIQQLDVNNAFLNGTLEE--EVYMQQ 1022
Query: 1796 PPGFEVAGKSNLVCRLNKALYGLNQASKAWFDKLKTVLHSLGFSASKADTYLFFW 1960
PPGFE + K NLVC+L+KA+YGL QA +AWFDKLK+ L L F ASK D LF +
Sbjct: 1023 PPGFEASDK-NLVCKLHKAIYGLKQAPRAWFDKLKSTLLQLNFYASKCDPSLFIY 1076
Score = 285 bits (730), Expect(2) = 1e-78
Identities = 136/282 (48%), Positives = 186/282 (65%), Gaps = 1/282 (0%)
Frame = +3
Query: 255 FCSDCAVSKSHKLPFANSSHKITEPLQLIPTDLWGPAPVQSSNGCSYNVAFVDDFTKFIW 434
FC+ C + KSH+LP S P L+ +DLWGPAPV S+ G Y V FVD T+F W
Sbjct: 532 FCTPCCLGKSHRLPSNLSRTIYNTPFDLVYSDLWGPAPVTSTCGYQYYVTFVDAHTRFTW 591
Query: 435 IYFFKAKSDTQNAFLHFKNLVENQTNKRIKMVQSDGGTEFKPLIKTFSESGIIHKVSCPY 614
IY K+K+ T N F F +V+NQ + IK +Q+D G E++ +E GI H++ CP+
Sbjct: 592 IYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSFTTYLNEVGIQHRLICPH 651
Query: 615 TPQQNGTVERKHKHIIEVGLSLLSQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEA 794
T QNG ERKH+HI+E+GL+L++Q+ +P +FWD SF T+VYLIN +P+ +I P+
Sbjct: 652 THHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHK 711
Query: 795 LYGHVPTYSHLRVFGCQCFPHLRPYNKNKLELRSQSSVFLGYSNQFKGYKILLPSGKVIC 974
L+ P Y LR+FGC CFPHLRPYNK+KL+ RSQ VFLGYS KGYK L G++
Sbjct: 712 LFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYI 771
Query: 975 SRDVVFNEHIFPFQQISTLSSSQNSQ-PRQQILTMNPIPSPS 1097
S+DVVFNE FP++ + + S + +SQ P LT+NP P+P+
Sbjct: 772 SKDVVFNETKFPYKDLFSSSKASDSQLPISVPLTINPTPTPT 813
Score = 39.3 bits (90), Expect(2) = 1e-78
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 QATGEILLKGSL-RNGLYQFKFAKIIPPPTVKSNFLHSKNKEAHIVVLPNRFSVRPFSYV 181
Q T E+LL+GS+ +GLY KF ++P P+ +S + ++ + N + P S+
Sbjct: 446 QDTNEVLLQGSVGSDGLY--KFPALLPNPSTQS----VQQQQLARIFSVNTAATSPVSFA 499
Query: 182 VSSIKPLELWHKRLGHPSFD 241
WH RLGHP+ D
Sbjct: 500 T--------WHSRLGHPNVD 511
>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1073
Score = 262 bits (669), Expect(2) = e-136
Identities = 142/286 (49%), Positives = 187/286 (65%), Gaps = 10/286 (3%)
Frame = +3
Query: 2082 DLGSLHFFLGIEVNYTTQG-ILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 2258
DLG L FFLGIEV G ++LTQ KYI LL + +M GSK +++PM+S LSK
Sbjct: 782 DLGDLDFFLGIEVKSQPDGSLILTQSKYIRDLLNRTDMEGSKPISSPMISGSKLSKVGSE 841
Query: 2259 SFSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTDY 2438
F LYR ++G+LQY TIT PEI+++VNK+ Q+M PL HW AVK +L Y+ GTT +
Sbjct: 842 DFLDASLYRSVVGALQYATITRPEISFSVNKVCQFMSHPLTHHWAAVKRILRYLKGTTSW 901
Query: 2439 GLHLY---HSPHLLITGFADS------DDRKSTSGHCIFIGKNLICWSSKTQPTVSRSSA 2591
GL L S L I + D+ DDR+STSG IF+G NL+ W SK Q V+RSS
Sbjct: 902 GLRLQPASSSSSLSIHAYCDADWASDPDDRRSTSGASIFLGPNLVSWWSKKQTVVARSST 961
Query: 2592 EAEYHSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEID 2771
EAEY SLA + T+V W+++LL EL++ H P+I+ DNLS V ++ NP++ ARTKH+E+D
Sbjct: 962 EAEYRSLALATTEVTWIQTLLSELKV-THSTPIIFCDNLSTVALAHNPVLHARTKHMELD 1020
Query: 2772 LHFIRDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKLQV 2909
L F+R+KV K V H+ A DQ AD TK LS F +R+KLQV
Sbjct: 1021 LFFVREKVAAKCLQVVHVPAIDQCADVLTKALSPTRFCELRSKLQV 1066
Score = 254 bits (649), Expect(2) = e-136
Identities = 126/235 (53%), Positives = 161/235 (68%)
Frame = +2
Query: 1256 PISVTSPTPIQTAALPDNTLPPSNTHPILTRAKVGIFKPKSYSVALLTEMEPTNVLDALS 1435
P +++ PT + P N HP+ TRAK GI KP+ LLT++EP ALS
Sbjct: 510 PSTLSIPTSSNLEPSSSPIIHPHNVHPMTTRAKDGIVKPRLQPTLLLTQVEPKTTKQALS 569
Query: 1436 NVKWKDAMLQEYTALMKNHTWDLTVLPPGKHVIGCRWVFKIKKNANGSFSRHKARLVAKG 1615
N W AM EY AL+ N+TW L LPP + IGC+WVF++K+N NGS ++KARLVAKG
Sbjct: 570 NPTWSAAMQTEYNALLHNNTWSLVPLPPHRTAIGCKWVFRVKENPNGSVQKYKARLVAKG 629
Query: 1616 YTQIAGIDFTDVFSPVIKPATVRLVLTIALAKGWPIRQIDVDNAFLNGDLDKSTEIYMCQ 1795
+ Q G D+ + FSPVIKP TVRL+LT+AL WPI+Q+DV+NAFLNG L++ E+YM Q
Sbjct: 630 FNQQFGFDYHETFSPVIKPVTVRLILTLALTHRWPIQQLDVNNAFLNGTLEE--EVYMQQ 687
Query: 1796 PPGFEVAGKSNLVCRLNKALYGLNQASKAWFDKLKTVLHSLGFSASKADTYLFFW 1960
PPGFE + K NLVC+L+KA+YGL QA +AWFDKLK+ L L F ASK D LF +
Sbjct: 688 PPGFEASDK-NLVCKLHKAIYGLKQAPRAWFDKLKSTLLQLNFYASKCDPSLFIY 741
Score = 285 bits (730), Expect(2) = 1e-78
Identities = 136/282 (48%), Positives = 186/282 (65%), Gaps = 1/282 (0%)
Frame = +3
Query: 255 FCSDCAVSKSHKLPFANSSHKITEPLQLIPTDLWGPAPVQSSNGCSYNVAFVDDFTKFIW 434
FC+ C + KSH+LP S P L+ +DLWGPAPV S+ G Y V FVD T+F W
Sbjct: 197 FCTPCCLGKSHRLPSNLSRTIYNTPFDLVYSDLWGPAPVTSTCGYQYYVTFVDAHTRFTW 256
Query: 435 IYFFKAKSDTQNAFLHFKNLVENQTNKRIKMVQSDGGTEFKPLIKTFSESGIIHKVSCPY 614
IY K+K+ T N F F +V+NQ + IK +Q+D G E++ +E GI H++ CP+
Sbjct: 257 IYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSFTTYLNEVGIQHRLICPH 316
Query: 615 TPQQNGTVERKHKHIIEVGLSLLSQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEA 794
T QNG ERKH+HI+E+GL+L++Q+ +P +FWD SF T+VYLIN +P+ +I P+
Sbjct: 317 THHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHK 376
Query: 795 LYGHVPTYSHLRVFGCQCFPHLRPYNKNKLELRSQSSVFLGYSNQFKGYKILLPSGKVIC 974
L+ P Y LR+FGC CFPHLRPYNK+KL+ RSQ VFLGYS KGYK L G++
Sbjct: 377 LFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYI 436
Query: 975 SRDVVFNEHIFPFQQISTLSSSQNSQ-PRQQILTMNPIPSPS 1097
S+DVVFNE FP++ + + S + +SQ P LT+NP P+P+
Sbjct: 437 SKDVVFNETKFPYKDLFSSSKASDSQLPISVPLTINPTPTPT 478
Score = 39.3 bits (90), Expect(2) = 1e-78
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 QATGEILLKGSL-RNGLYQFKFAKIIPPPTVKSNFLHSKNKEAHIVVLPNRFSVRPFSYV 181
Q T E+LL+GS+ +GLY KF ++P P+ +S + ++ + N + P S+
Sbjct: 111 QDTNEVLLQGSVGSDGLY--KFPALLPNPSTQS----VQQQQLARIFSVNTAATSPVSFA 164
Query: 182 VSSIKPLELWHKRLGHPSFD 241
WH RLGHP+ D
Sbjct: 165 T--------WHSRLGHPNVD 176
>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 253 bits (647), Expect(2) = e-131
Identities = 139/292 (47%), Positives = 194/292 (66%), Gaps = 10/292 (3%)
Frame = +3
Query: 2082 DLGSLHFFLGIEVNYTTQG-ILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 2258
DLG+L +FLGIEV + G +LL+Q KYI LL KV M SKG++TPM+ L+K G
Sbjct: 1115 DLGTLDYFLGIEVKSLSNGRLLLSQHKYISDLLTKVKMEDSKGISTPMIGGQQLAK-TGT 1173
Query: 2259 SFSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTDY 2438
F+ LYR ++G+LQY TIT PEI ++VNK+SQ+M P++ HWK VK +L Y+ GT +
Sbjct: 1174 LFNDPTLYRSVVGALQYATITRPEIAFSVNKVSQFMCSPMEEHWKVVKRILRYLKGTLKH 1233
Query: 2439 GLHLY---HSPHLLITGFADSD------DRKSTSGHCIFIGKNLICWSSKTQPTVSRSSA 2591
GL S +T F D+D DR+STS CI++G NL+ W SK Q V+RSS
Sbjct: 1234 GLVFTPARSSSSFNLTAFTDADWAADPNDRRSTSAACIYLGPNLVSWWSKKQLLVARSST 1293
Query: 2592 EAEYHSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEID 2771
EAEY +LA ++T+VLW++SLLQEL+I + P V+ DN S V +S NP++ +R+KH+E+D
Sbjct: 1294 EAEYRALAQAVTEVLWIQSLLQELKIRFNTPMVL-CDNQSTVALSHNPVLHSRSKHMELD 1352
Query: 2772 LHFIRDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKLQVAALSSL 2927
+ F+R+KV K+ +V HI + Q AD TK LS + F +R+KL VA S +
Sbjct: 1353 IFFVREKVISKALVVSHIPSQHQYADLLTKALSPKRFLSLRSKLNVADPSDM 1404
Score = 246 bits (628), Expect(2) = e-131
Identities = 116/235 (49%), Positives = 167/235 (71%)
Frame = +2
Query: 1256 PISVTSPTPIQTAALPDNTLPPSNTHPILTRAKVGIFKPKSYSVALLTEMEPTNVLDALS 1435
P + ++ +P +++ P + PP N HP++TR+K GI +P+ LL+ +EP V AL+
Sbjct: 842 PDNSSTNSPPASSSSPSLSAPPLNIHPMITRSKNGILQPRLNPTLLLSNVEPKTVKSALT 901
Query: 1436 NVKWKDAMLQEYTALMKNHTWDLTVLPPGKHVIGCRWVFKIKKNANGSFSRHKARLVAKG 1615
+ W AM E TAL NHTW L LPPG+ IGC+WVF++K+N +GS +++KARLVAKG
Sbjct: 902 DPHWLSAMQAELTALHDNHTWTLVDLPPGRKSIGCKWVFRLKENPDGSINKYKARLVAKG 961
Query: 1616 YTQIAGIDFTDVFSPVIKPATVRLVLTIALAKGWPIRQIDVDNAFLNGDLDKSTEIYMCQ 1795
+ Q G+DF++ FSPV+KP T+R+VL++A+ WP+RQ+D++NAFLNG L++ +IYM Q
Sbjct: 962 FHQQPGVDFSETFSPVVKPVTIRIVLSLAVTFQWPLRQLDINNAFLNGMLEE--DIYMSQ 1019
Query: 1796 PPGFEVAGKSNLVCRLNKALYGLNQASKAWFDKLKTVLHSLGFSASKADTYLFFW 1960
PPGF +LVC+L+K+LYGL QA +AWFD+L +VL LGF SK D LF +
Sbjct: 1020 PPGFIEPNSKHLVCKLHKSLYGLKQAPRAWFDRLTSVLLKLGFHKSKCDPSLFIF 1074
Score = 278 bits (710), Expect = 7e-74
Identities = 131/288 (45%), Positives = 194/288 (67%)
Frame = +3
Query: 255 FCSDCAVSKSHKLPFANSSHKITEPLQLIPTDLWGPAPVQSSNGCSYNVAFVDDFTKFIW 434
FC C ++KSH+LP S+ ++PL+L+ D+WGPA ++SS G Y + VD TK++W
Sbjct: 534 FCDSCCIAKSHRLPSHPSTTIYSKPLELVFLDVWGPASLESSCGYLYFLTCVDACTKYVW 593
Query: 435 IYFFKAKSDTQNAFLHFKNLVENQTNKRIKMVQSDGGTEFKPLIKTFSESGIIHKVSCPY 614
IY + KSD + F +FK L E Q +K VQ+DGG EF+ LI F + GI+H+++CPY
Sbjct: 594 IYLLRRKSDVFSNFQNFKALAEKQFQLPLKSVQTDGGGEFRALISFFQQEGILHRLTCPY 653
Query: 615 TPQQNGTVERKHKHIIEVGLSLLSQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEA 794
T QNGTVER+H+HI+E+GL++L S +P FWD +F T+ YLIN +P+ ++ ++SP++
Sbjct: 654 THHQNGTVERRHRHIVELGLAMLHHSTLPLNFWDHAFLTATYLINRLPSSSVGFQSPYKL 713
Query: 795 LYGHVPTYSHLRVFGCQCFPHLRPYNKNKLELRSQSSVFLGYSNQFKGYKILLPSGKVIC 974
++ P Y+ L+VFGC CFP LRPYN++KL+ RS+ VFLGYS KGYK L SG++
Sbjct: 714 IHHKDPDYTFLKVFGCSCFPLLRPYNQHKLQPRSEECVFLGYSPLHKGYKCLSKSGRIYI 773
Query: 975 SRDVVFNEHIFPFQQISTLSSSQNSQPRQQILTMNPIPSPSALPNHYP 1118
S+DV+FNE FP+ + ++S +S P + T+ PS + +H P
Sbjct: 774 SKDVIFNEGRFPYHDLFVTATS-DSIPATSVSTL-----PSLVCSHNP 815
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 253 bits (645), Expect(2) = e-130
Identities = 144/301 (47%), Positives = 186/301 (61%), Gaps = 17/301 (5%)
Frame = +2
Query: 1103 SQSLPNSPNTSSHHLSHNPPFPLHSINIDXXXXXXXXXXXXXXXXQETRVE--------- 1255
S SLP S SSH L N + SI D
Sbjct: 637 SLSLPTSSAQSSHQLDENLGSDIRSIQXDFSNTDSSSTVPILXESASIXSSSNLYALPGT 696
Query: 1256 -PISVTSPTPIQTAALPDNTLP---PSNTHPILTRAKVGIFKPKSYSVALLTEMEPTNVL 1423
P+S S P ++ NT P P H ++TR+K GIFKP Y+V L E EP
Sbjct: 697 IPLSTNSDEPNESI----NTRPVTXPQQPHHMVTRSKNGIFKPXVYTVDLNVE-EPNTFQ 751
Query: 1424 DALSNVKWKDAMLQEYTALMKNHTWDLTVLPPGKHVIGCRWVFKIKKNANGSFSRHKARL 1603
+A+S+ KWK+AM +E+ ALMKN TW L LP + +GCRWVFK+K+N +GS SR+KARL
Sbjct: 752 EAISHPKWKEAMDEEFRALMKNKTWSLVSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARL 811
Query: 1604 VAKGYTQIAGIDFTDVFSPVIKPATVRLVLTIALAKGWPIRQIDVDNAFLNGDLDKSTEI 1783
VAKGY+Q+ G DF + FSPV+KP T+R+VL IA+++ W IRQ+DV+NAFLNG+L + E+
Sbjct: 812 VAKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVSQSWCIRQLDVNNAFLNGELQE--EV 869
Query: 1784 YMCQPPGFEVAGKSN----LVCRLNKALYGLNQASKAWFDKLKTVLHSLGFSASKADTYL 1951
YM QPPGF+ GK+N LVC+L+KALYGL QA +AWFDKLK L GFS++K+D L
Sbjct: 870 YMDQPPGFD--GKTNQEQKLVCKLHKALYGLKQAPRAWFDKLKISLQQFGFSSTKSDQSL 927
Query: 1952 F 1954
F
Sbjct: 928 F 928
Score = 243 bits (620), Expect(2) = e-130
Identities = 110/217 (50%), Positives = 155/217 (71%)
Frame = +3
Query: 363 APVQSSNGCSYNVAFVDDFTKFIWIYFFKAKSDTQNAFLHFKNLVENQTNKRIKMVQSDG 542
AP+ SS G +Y V+F D ++++ W+Y K KS T+ AFL FK E Q ++K Q+D
Sbjct: 386 APINSSYGFTYYVSFXDAYSRYTWVYXLKTKSQTREAFLMFKAQAELQFGCKLKTFQTDW 445
Query: 543 GTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQSGIPNKFWDDS 722
G EF+ L F ++GIIH++SCP+T +QNG +ERKH+HI+E+GL+LL+Q+ +P K+W D+
Sbjct: 446 GGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDA 505
Query: 723 FATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPYNKNKLELRSQS 902
F+T+V+LIN +P + + K P+E L+ P YS L+VFGC CFPHLRPYNK+KL+ RS
Sbjct: 506 FSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSP 565
Query: 903 SVFLGYSNQFKGYKILLPSGKVICSRDVVFNEHIFPF 1013
FLGYS++ KGYK L G++ SR VVF+E FPF
Sbjct: 566 CTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPF 602
Score = 310 bits (795), Expect = 2e-85
Identities = 155/294 (52%), Positives = 212/294 (72%), Gaps = 7/294 (2%)
Frame = +3
Query: 2082 DLGSLHFFLGIEVNYTTQGIL-LTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 2258
DLG L +FLGIEV T G L L+QKKYI+ LL K M G+K + TPMLS LS G+
Sbjct: 971 DLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPMLSGLKLSAGMGD 1030
Query: 2259 SFSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTDY 2438
+ YR ++G+LQY+TIT PEI ++VNK+ Q+MQ+PLD HWKAVK +L Y++GTTD
Sbjct: 1031 PIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLDTHWKAVKRILRYLNGTTDL 1090
Query: 2439 GLHLYHSPHLLITGFADSD------DRKSTSGHCIFIGKNLICWSSKTQPTVSRSSAEAE 2600
G+ L S + + GF D+D DR+STSGHC+F+GK+L+ WSSK Q T SRSS EAE
Sbjct: 1091 GIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSSKKQHTTSRSSTEAE 1150
Query: 2601 YHSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEIDLHF 2780
Y SLA+ +++LWL+SLL EL+ + PVIW DN+S V +S+NP++ +RTKH+E+DL+F
Sbjct: 1151 YRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMELDLYF 1210
Query: 2781 IRDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKLQVAALSSLELRGG 2942
+R+KV ++ +V+H+ DQ+AD FTKPLS +FF ++R KL VA SL+L+ G
Sbjct: 1211 VREKVMERKLVVNHVPTEDQVADVFTKPLSFRFFDKLREKLTVA---SLDLKNG 1261
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 260 bits (664), Expect(2) = e-129
Identities = 129/287 (44%), Positives = 187/287 (65%), Gaps = 8/287 (2%)
Frame = +3
Query: 2082 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGNS 2261
DLG L++FLGIEVN GI+LTQ KY LL KV MS K ++TP+ +S LS +G+
Sbjct: 1027 DLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVGMSDCKPISTPLSTSEKLSIHEGSP 1086
Query: 2262 FSYGYL--YRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTD 2435
+ YR I+G+LQYLT+T P+I ++VNK+ Q++ P LHW AVK +L YI T+
Sbjct: 1087 LGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQFLHAPTTLHWAAVKRILRYIKQCTN 1146
Query: 2436 YGLHLYHSPHLLITGFADSD------DRKSTSGHCIFIGKNLICWSSKTQPTVSRSSAEA 2597
GLH++ S L++ F+D+D DRKST G +F+G NL+ WS++ QPTVSRSS E+
Sbjct: 1147 LGLHIHRSDSTLVSAFSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTES 1206
Query: 2598 EYHSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEIDLH 2777
EY +LA + +++W++ LL E+ I + +W DNL ++S+NPI ARTKH+E+D H
Sbjct: 1207 EYKALANATAELIWVQILLTEISIKSPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDYH 1266
Query: 2778 FIRDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKLQVAAL 2918
F+RD+V +K + ++ DQ+AD FTKPLS + + L + L
Sbjct: 1267 FVRDRVAKKLLDIEYVPTGDQVADGFTKPLSVRLLENFKVNLNLTRL 1313
Score = 234 bits (597), Expect(2) = e-129
Identities = 121/236 (51%), Positives = 168/236 (71%), Gaps = 12/236 (5%)
Frame = +2
Query: 1307 NTLPPSNTHPILTRAKVGIFKPKSYSVALL------TEMEPTNVLDALSNVKWKDAMLQE 1468
+++ P++T P TR + G+ KPK Y+ + + EP ++ +AL +V WKDAM E
Sbjct: 766 SSMDPASTRP-RTRLQQGVRKPKVYTDGTIRYGCFTSSGEPYDLNEALGDVNWKDAMDIE 824
Query: 1469 YTALMKNHTWDLTVLPPGKHVIGCRWVFKIKKNANGSFSRHKARLVAKGYTQIAGIDFTD 1648
Y+ALMKN TW L G++VIGC+WV+KIK+ A+GS R+KARLVAKGY Q GID+ D
Sbjct: 825 YSALMKNKTWHLVPPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDD 884
Query: 1649 VFSPVIKPATVRLVLTIALAKGWPIRQIDVDNAFLNGDLDKSTEIYMCQPPGFEVAGKSN 1828
FSPV+K AT+R++L+IA+++GW + Q+DV NAFL+G L++ E+YM QPPG+E + K N
Sbjct: 885 TFSPVVKHATIRIILSIAVSRGWSLCQLDVQNAFLHGVLEE--EVYMQQPPGYEDSTKLN 942
Query: 1829 LVCRLNKALYGLNQASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 1978
VC+L+KALYGL QA +AW+ +L L SLGF ASKADT LFF+ IF+ +Y
Sbjct: 943 YVCKLDKALYGLKQAPRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSVTIFVLVY 998
Score = 203 bits (517), Expect = 7e-50
Identities = 101/211 (47%), Positives = 146/211 (69%), Gaps = 1/211 (0%)
Frame = +3
Query: 453 KSDTQNAFLHFKNLVENQTNKRIKMVQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNG 632
KS+ F F++LVE +++I VQ+D G E++ L F++ GI H VSCP+ QQNG
Sbjct: 402 KSEVFQKFHEFQSLVERLFDRKILAVQTDWGGEYQRLNTFFNKIGISHLVSCPHAHQQNG 461
Query: 633 TVERKHKHIIEVGLSLLSQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVP 812
+ ERKH+HI+EVGLSLL+ + +P KFWD++F + YLIN P K +N +PFE L+ P
Sbjct: 462 SAERKHRHIVEVGLSLLAHASMPLKFWDEAFLAAAYLINRTPTKILNLDTPFERLFHKQP 521
Query: 813 TYSHLRVFGCQCFPHLRPYNKNKLELRSQSSVFLGYSNQFKGYKIL-LPSGKVICSRDVV 989
YS LR+FGC C+P+LRPYN +KL+ RS+ VFLGYS+ KG+K L + +G+V SRDV
Sbjct: 522 DYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVT 581
Query: 990 FNEHIFPFQQISTLSSSQNSQPRQQILTMNP 1082
F+E+ FPF ++L S+ ++ R +I ++P
Sbjct: 582 FDENFFPF---ASLHSNAGARLRSEIQLLSP 609
>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1358
Score = 251 bits (640), Expect(2) = e-129
Identities = 133/285 (46%), Positives = 187/285 (65%), Gaps = 10/285 (3%)
Frame = +3
Query: 2085 LGSLHFFLGIEVNYTT-QGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGNS 2261
LGSL +FLGIEV + + ++LTQ KYI LL K N++ + G +PM S+ LS+ +
Sbjct: 1066 LGSLDYFLGIEVKHLPDKSLVLTQSKYIRDLLFKTNLAEAHGAPSPMFSNCKLSRSGNDF 1125
Query: 2262 FSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTDYG 2441
F +R ++G+LQY T+T PEI++AVNK+ Q+M PLD HW AVK +L Y+ GT YG
Sbjct: 1126 FHDPTFFRSVVGALQYATLTRPEISFAVNKVCQFMATPLDSHWVAVKRILKYLKGTLSYG 1185
Query: 2442 LHLYHSP---HLLITGFADS------DDRKSTSGHCIFIGKNLICWSSKTQPTVSRSSAE 2594
LH+ + + +T F D+ DDR+STSG IF G NLI W S+ Q ++RSS E
Sbjct: 1186 LHMQPAAVNGPISLTAFCDADWASDIDDRRSTSGSAIFFGPNLISWWSRKQRVIARSSTE 1245
Query: 2595 AEYHSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEIDL 2774
AEY S+A + ++ W+++LLQEL++P P ++ DN S V ++ NP+ ++TKH+EID+
Sbjct: 1246 AEYRSIAQASAELTWIQALLQELKVPFSTPTLL-CDNQSAVAIAHNPVFHSKTKHMEIDV 1304
Query: 2775 HFIRDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKLQV 2909
F+RDKV K LV+HI A DQ AD TKPLS F +RNKL+V
Sbjct: 1305 FFVRDKVLSKQLLVYHIPALDQWADLLTKPLSAARFEVLRNKLKV 1349
Score = 243 bits (620), Expect(2) = e-129
Identities = 140/327 (42%), Positives = 186/327 (56%), Gaps = 11/327 (3%)
Frame = +2
Query: 1031 VLFSKFSTSTTNLNHESHSQPLCTSQSLPNSPN-----TSSHHLSHNPPFPLHSINIDXX 1195
V+F++ T+L S +Q + Q +P+ T+S LS PP P I
Sbjct: 717 VIFNEHRFPYTDLFQPSLTQNVSPCQYFNLNPDLSPPCTTSTVLSQQPPLP-SQIGDSSV 775
Query: 1196 XXXXXXXXXXXXXXQETRVEPISVTSPTPIQTAALPDNTLPPSNTHPILTRAKVGIFKPK 1375
+V+SPT A T+ N HP+ TR+K G P+
Sbjct: 776 SIIPSVSSSQNVSPSSPESSSQNVSSPTSSTAPASIPRTI---NNHPMQTRSKSGFHNPR 832
Query: 1376 SYSVALLTEMEPTNVLDALSNVKWKDAMLQEYTALMKNHTWDLTVLPPGKHVIGCRWVFK 1555
+ L EP V AL++ W AM QEY ALM NHTWDL LP + +GC+WVF+
Sbjct: 833 IHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLPSDRKAVGCKWVFR 892
Query: 1556 IKKNANGSFSRHKARLVAKGYTQIAGIDFTDVFSPVIKPATVRLVLTIALAKGWPIRQID 1735
+K+NA+GS + KARLVAKG+ Q+ G DF + FSPVIKP T+R++LT+AL W + Q+D
Sbjct: 893 VKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILTLALTNNWNLFQLD 952
Query: 1736 VDNAFLNGDLDKSTEIYMCQPPGFEVAGKSNLVCRLNKALYGLNQASKAWFDKLKTVLHS 1915
V+NAFLNG L+++ IYM QPPGFE AG +LVC+LNKALYGL QA + WF+KLK L
Sbjct: 953 VNNAFLNGTLEET--IYMVQPPGFE-AGDKSLVCKLNKALYGLKQAPRQWFNKLKLTLTR 1009
Query: 1916 LGFSASKADTYLFFW------IFLCLY 1978
GF ASK D LF + IF+ +Y
Sbjct: 1010 FGFQASKCDPSLFQYQHQTHTIFILVY 1036
Score = 285 bits (730), Expect = 2e-76
Identities = 138/280 (49%), Positives = 182/280 (65%)
Frame = +3
Query: 255 FCSDCAVSKSHKLPFANSSHKITEPLQLIPTDLWGPAPVQSSNGCSYNVAFVDDFTKFIW 434
FCS C V KS +LP + S + PL +I TDLWGP+ + S +G Y VAF+D F+K+ W
Sbjct: 474 FCSSCCVGKSRRLPSSASQTIYSAPLDVIFTDLWGPSHITSFSGYLYYVAFIDAFSKYTW 533
Query: 435 IYFFKAKSDTQNAFLHFKNLVENQTNKRIKMVQSDGGTEFKPLIKTFSESGIIHKVSCPY 614
IY K+K++T + F FK + E Q N +IK VQSD G E++ + +GI H+V CP+
Sbjct: 534 IYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDWGGEYRAFTSFLATNGIQHRVICPH 593
Query: 615 TPQQNGTVERKHKHIIEVGLSLLSQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEA 794
T QNG VERKH+HI+E+GL+LL + +P KFWD +F T+VYLIN +P+ +N+ PF
Sbjct: 594 THHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFAFTTAVYLINRLPSAALNFNVPFTT 653
Query: 795 LYGHVPTYSHLRVFGCQCFPHLRPYNKNKLELRSQSSVFLGYSNQFKGYKILLPSGKVIC 974
L+ P Y LR FGC CFP LRPY +KL RSQ VFLGYSN KGYK L SG++
Sbjct: 654 LFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQECVFLGYSNSHKGYKCLSSSGRIYI 713
Query: 975 SRDVVFNEHIFPFQQISTLSSSQNSQPRQQILTMNPIPSP 1094
S+DV+FNEH FP+ + S +QN P Q +NP SP
Sbjct: 714 SKDVIFNEHRFPYTDLFQPSLTQNVSP-CQYFNLNPDLSP 752
>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1279
Score = 251 bits (640), Expect(2) = e-129
Identities = 133/285 (46%), Positives = 187/285 (65%), Gaps = 10/285 (3%)
Frame = +3
Query: 2085 LGSLHFFLGIEVNYTT-QGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGNS 2261
LGSL +FLGIEV + + ++LTQ KYI LL K N++ + G +PM S+ LS+ +
Sbjct: 987 LGSLDYFLGIEVKHLPDKSLVLTQSKYIRDLLFKTNLAEAHGAPSPMFSNCKLSRSGNDF 1046
Query: 2262 FSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTDYG 2441
F +R ++G+LQY T+T PEI++AVNK+ Q+M PLD HW AVK +L Y+ GT YG
Sbjct: 1047 FHDPTFFRSVVGALQYATLTRPEISFAVNKVCQFMATPLDSHWVAVKRILKYLKGTLSYG 1106
Query: 2442 LHLYHSP---HLLITGFADS------DDRKSTSGHCIFIGKNLICWSSKTQPTVSRSSAE 2594
LH+ + + +T F D+ DDR+STSG IF G NLI W S+ Q ++RSS E
Sbjct: 1107 LHMQPAAVNGPISLTAFCDADWASDIDDRRSTSGSAIFFGPNLISWWSRKQRVIARSSTE 1166
Query: 2595 AEYHSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEIDL 2774
AEY S+A + ++ W+++LLQEL++P P ++ DN S V ++ NP+ ++TKH+EID+
Sbjct: 1167 AEYRSIAQASAELTWIQALLQELKVPFSTPTLL-CDNQSAVAIAHNPVFHSKTKHMEIDV 1225
Query: 2775 HFIRDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKLQV 2909
F+RDKV K LV+HI A DQ AD TKPLS F +RNKL+V
Sbjct: 1226 FFVRDKVLSKQLLVYHIPALDQWADLLTKPLSAARFEVLRNKLKV 1270
Score = 243 bits (620), Expect(2) = e-129
Identities = 140/327 (42%), Positives = 186/327 (56%), Gaps = 11/327 (3%)
Frame = +2
Query: 1031 VLFSKFSTSTTNLNHESHSQPLCTSQSLPNSPN-----TSSHHLSHNPPFPLHSINIDXX 1195
V+F++ T+L S +Q + Q +P+ T+S LS PP P I
Sbjct: 638 VIFNEHRFPYTDLFQPSLTQNVSPCQYFNLNPDLSPPCTTSTVLSQQPPLP-SQIGDSSV 696
Query: 1196 XXXXXXXXXXXXXXQETRVEPISVTSPTPIQTAALPDNTLPPSNTHPILTRAKVGIFKPK 1375
+V+SPT A T+ N HP+ TR+K G P+
Sbjct: 697 SIIPSVSSSQNVSPSSPESSSQNVSSPTSSTAPASIPRTI---NNHPMQTRSKSGFHNPR 753
Query: 1376 SYSVALLTEMEPTNVLDALSNVKWKDAMLQEYTALMKNHTWDLTVLPPGKHVIGCRWVFK 1555
+ L EP V AL++ W AM QEY ALM NHTWDL LP + +GC+WVF+
Sbjct: 754 IHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLPSDRKAVGCKWVFR 813
Query: 1556 IKKNANGSFSRHKARLVAKGYTQIAGIDFTDVFSPVIKPATVRLVLTIALAKGWPIRQID 1735
+K+NA+GS + KARLVAKG+ Q+ G DF + FSPVIKP T+R++LT+AL W + Q+D
Sbjct: 814 VKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILTLALTNNWNLFQLD 873
Query: 1736 VDNAFLNGDLDKSTEIYMCQPPGFEVAGKSNLVCRLNKALYGLNQASKAWFDKLKTVLHS 1915
V+NAFLNG L+++ IYM QPPGFE AG +LVC+LNKALYGL QA + WF+KLK L
Sbjct: 874 VNNAFLNGTLEET--IYMVQPPGFE-AGDKSLVCKLNKALYGLKQAPRQWFNKLKLTLTR 930
Query: 1916 LGFSASKADTYLFFW------IFLCLY 1978
GF ASK D LF + IF+ +Y
Sbjct: 931 FGFQASKCDPSLFQYQHQTHTIFILVY 957
Score = 285 bits (730), Expect = 1e-76
Identities = 138/280 (49%), Positives = 182/280 (65%)
Frame = +3
Query: 255 FCSDCAVSKSHKLPFANSSHKITEPLQLIPTDLWGPAPVQSSNGCSYNVAFVDDFTKFIW 434
FCS C V KS +LP + S + PL +I TDLWGP+ + S +G Y VAF+D F+K+ W
Sbjct: 395 FCSSCCVGKSRRLPSSASQTIYSAPLDVIFTDLWGPSHITSFSGYLYYVAFIDAFSKYTW 454
Query: 435 IYFFKAKSDTQNAFLHFKNLVENQTNKRIKMVQSDGGTEFKPLIKTFSESGIIHKVSCPY 614
IY K+K++T + F FK + E Q N +IK VQSD G E++ + +GI H+V CP+
Sbjct: 455 IYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDWGGEYRAFTSFLATNGIQHRVICPH 514
Query: 615 TPQQNGTVERKHKHIIEVGLSLLSQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEA 794
T QNG VERKH+HI+E+GL+LL + +P KFWD +F T+VYLIN +P+ +N+ PF
Sbjct: 515 THHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFAFTTAVYLINRLPSAALNFNVPFTT 574
Query: 795 LYGHVPTYSHLRVFGCQCFPHLRPYNKNKLELRSQSSVFLGYSNQFKGYKILLPSGKVIC 974
L+ P Y LR FGC CFP LRPY +KL RSQ VFLGYSN KGYK L SG++
Sbjct: 575 LFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQECVFLGYSNSHKGYKCLSSSGRIYI 634
Query: 975 SRDVVFNEHIFPFQQISTLSSSQNSQPRQQILTMNPIPSP 1094
S+DV+FNEH FP+ + S +QN P Q +NP SP
Sbjct: 635 SKDVIFNEHRFPYTDLFQPSLTQNVSP-CQYFNLNPDLSP 673
>gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 538
Score = 258 bits (658), Expect(2) = e-129
Identities = 141/286 (49%), Positives = 185/286 (64%), Gaps = 10/286 (3%)
Frame = +3
Query: 2082 DLGSLHFFLGIEVNYTTQGIL-LTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 2258
DLG L FFLGIEV T G L LTQ KYI LL + NM S +++PM+S LS+
Sbjct: 246 DLGRLDFFLGIEVKSNTDGSLTLTQSKYIRDLLNRTNMENSNPISSPMVSGCKLSRTGSE 305
Query: 2259 SFSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTDY 2438
F LYR ++G+LQY TIT PEI+++VNK+ Q+M PL+ HW AVK +L Y+ GT
Sbjct: 306 KFLDVTLYRSVVGALQYATITRPEISFSVNKVCQFMSNPLEQHWSAVKRILRYLKGTMFL 365
Query: 2439 GLHLYHSPH---LLITGFADS------DDRKSTSGHCIFIGKNLICWSSKTQPTVSRSSA 2591
GLHL +P L I + D+ DDR+STSG IF+G NLI W SK Q V+RSSA
Sbjct: 366 GLHLQPAPSNSPLSIRAYCDADWASDPDDRRSTSGASIFVGPNLISWWSKKQTVVARSSA 425
Query: 2592 EAEYHSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEID 2771
EAEY SLA + +VLW+++LL EL + H PV++ DN+S V ++ NP++ ARTKH+E+D
Sbjct: 426 EAEYRSLALATAEVLWIQTLLSELHVS-HHTPVVYCDNMSTVALAHNPVLHARTKHMELD 484
Query: 2772 LHFIRDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKLQV 2909
L F+R+KV S V H+ A DQ AD TK LS F +R KL++
Sbjct: 485 LFFVREKVAANSLHVVHVPAIDQYADILTKALSPSRFCELRTKLKL 530
Score = 236 bits (601), Expect(2) = e-129
Identities = 115/206 (55%), Positives = 149/206 (72%)
Frame = +2
Query: 1343 TRAKVGIFKPKSYSVALLTEMEPTNVLDALSNVKWKDAMLQEYTALMKNHTWDLTVLPPG 1522
TRAK GI KP+ LLT +EP N AL++ W AM QEY AL+ N TW L LPP
Sbjct: 3 TRAKAGIVKPRLQPTLLLTHIEPKNTKQALASDTWLAAMKQEYNALLNNGTWTLVSLPPN 62
Query: 1523 KHVIGCRWVFKIKKNANGSFSRHKARLVAKGYTQIAGIDFTDVFSPVIKPATVRLVLTIA 1702
K IGC+WVF+IK+N++G+ +++KARLVAKG+ Q G D+ + FSPV+KP T+RL+LT+A
Sbjct: 63 KTAIGCKWVFRIKENSDGTVNKYKARLVAKGFHQQFGSDYNETFSPVVKPVTIRLILTLA 122
Query: 1703 LAKGWPIRQIDVDNAFLNGDLDKSTEIYMCQPPGFEVAGKSNLVCRLNKALYGLNQASKA 1882
L W I+Q+DV+NAFLNG+L + E+YM QPPGFE + K+ LVC+L+KA+YGL QA +A
Sbjct: 123 LTHHWSIQQLDVNNAFLNGNLQE--EVYMSQPPGFESSDKT-LVCKLHKAIYGLKQAPRA 179
Query: 1883 WFDKLKTVLHSLGFSASKADTYLFFW 1960
WFDKLKT L L F SK D LF +
Sbjct: 180 WFDKLKTTLFQLNFQISKCDPSLFVY 205
>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
Length = 1242
Score = 249 bits (635), Expect(2) = e-128
Identities = 113/225 (50%), Positives = 157/225 (69%)
Frame = +3
Query: 339 IPTDLWGPAPVQSSNGCSYNVAFVDDFTKFIWIYFFKAKSDTQNAFLHFKNLVENQTNKR 518
+ DLWGPAP+ SS G +Y V+F D ++++ +YF K KS T+ AFL FK E Q +
Sbjct: 624 LSNDLWGPAPINSSYGFTYYVSFXDAYSRYTXVYFLKTKSQTREAFLMFKAQAELQFGCK 683
Query: 519 IKMVQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQSGI 698
+ Q D G EF+ L F ++GIIH++SCP+T +QNG +ERKH+HI+E+GL+LL+Q+ +
Sbjct: 684 LXTFQXDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASL 743
Query: 699 PNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPYNKN 878
P K+W D+F+T V+LIN +P + + K P+E L+ P YS L+VFGC CFPHLRPYNK+
Sbjct: 744 PLKYWPDAFSTXVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKH 803
Query: 879 KLELRSQSSVFLGYSNQFKGYKILLPSGKVICSRDVVFNEHIFPF 1013
KL+ RS FLGYS++ KGYK L G++ SR V F+E FPF
Sbjct: 804 KLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVXFDETKFPF 848
Score = 239 bits (611), Expect(2) = e-128
Identities = 135/296 (45%), Positives = 175/296 (59%), Gaps = 12/296 (4%)
Frame = +2
Query: 1103 SQSLPNSPNTSSHHLSHNPPFPLHSINIDXXXXXXXXXXXXXXXXQETRVE--------- 1255
S SLP S SSH L N + S+ D
Sbjct: 883 SLSLPTSSAQSSHQLDENLGSDIRSVQQDLSNTDSSSTVPILNXSASISSSSNLYVLPGT 942
Query: 1256 -PISVTSPTPIQTAALPDNTLPPSNTHPILTRAKVGIFKPKSYSVALLTEMEPTNVLDAL 1432
P+S S P ++ TL P H ++TR+K GIFKPK Y+ L E EP +A+
Sbjct: 943 IPLSTNSDEPNESINTRPVTL-PQQPHHMVTRSKNGIFKPKVYTFDLNVE-EPNTFQEAI 1000
Query: 1433 SNVKWKDAMLQEYTALMKNHTWDLTVLPPGKHVIGCRWVFKIKKNANGSFSRHKARLVAK 1612
S+ KWK+AM +E+ ALMKN TW L + +GCRWVFK+K +GS SRHKARLVAK
Sbjct: 1001 SHPKWKEAMDEEFRALMKNKTWSFVSLLTNRTYVGCRWVFKLKMYPDGSVSRHKARLVAK 1060
Query: 1613 GYTQIAGIDFTDVFSPVIKPATVRLVLTIALAKGWPIRQIDVDNAFLNGDLDKSTEIYMC 1792
Y+Q+ G DF++ FSPV+KP T+R+VL I +++ W IRQ+DV+N FLNG+L + E+YM
Sbjct: 1061 DYSQVPGFDFSETFSPVVKPTTIRVVLAIVVSQSWSIRQLDVNNVFLNGELQE--EVYMD 1118
Query: 1793 QPPGFE--VAGKSNLVCRLNKALYGLNQASKAWFDKLKTVLHSLGFSASKADTYLF 1954
QPP FE K LVC+L+KALYGL QA +AWFDKLK L GFS++K+D LF
Sbjct: 1119 QPPSFEGRTNQKQKLVCKLHKALYGLKQAPRAWFDKLKISLQQFGFSSTKSDQSLF 1174
>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 900
Score = 254 bits (649), Expect(2) = e-125
Identities = 128/293 (43%), Positives = 187/293 (63%), Gaps = 17/293 (5%)
Frame = +3
Query: 2082 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGNS 2261
DLG LH+FLGIEV T Q +LL+Q++Y +LL +VNM+ K ++TP+ ++ LS G+
Sbjct: 606 DLGDLHYFLGIEVKRTPQTLLLSQERYTTELLERVNMTSCKPVSTPLSTAEKLSVEIGDE 665
Query: 2262 FSYGYL--YRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTD 2435
+ YR I+G+LQYLT+T P+I+Y+VNK+ Q++Q P HW AVK +L Y+ GT D
Sbjct: 666 LGPSDVTQYRSIVGALQYLTLTRPDISYSVNKVCQFLQTPTTAHWSAVKRILRYLKGTLD 725
Query: 2436 YGLHLYHSPHLLITGFADSD---------------DRKSTSGHCIFIGKNLICWSSKTQP 2570
GL + S L++ F+D+D DR+ST G +F G NLI WS++ Q
Sbjct: 726 LGLKIVKSSSNLVSAFSDADWAGSVDDRRSTGGFADRRSTGGFAVFFGDNLISWSARKQA 785
Query: 2571 TVSRSSAEAEYHSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQAR 2750
TVSRSS EAEY +LA + +++W++ LL EL I +W DNL +M++NP+ AR
Sbjct: 786 TVSRSSTEAEYKALANAAAEIIWVRKLLTELGILHPNAARLWCDNLGATYMTANPVFHAR 845
Query: 2751 TKHVEIDLHFIRDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKLQV 2909
TKH+E+D HF+R++V QK +H + + DQ+AD FTKP+S Q R+ L +
Sbjct: 846 TKHIEVDYHFVREQVAQKLLDIHFVSSQDQVADGFTKPISLQQLIGFRHNLNL 898
Score = 225 bits (573), Expect(2) = e-125
Identities = 112/213 (52%), Positives = 157/213 (73%), Gaps = 6/213 (2%)
Frame = +2
Query: 1340 LTRAKVGIFKPKSYS-----VALLTEM-EPTNVLDALSNVKWKDAMLQEYTALMKNHTWD 1501
+TR++ G+ +PK Y+ LTE EP+++ +ALS+ WK AM +E++AL+ N TW
Sbjct: 355 VTRSQHGVHRPKKYTDGTVRYGCLTETGEPSSLQEALSSANWKQAMDKEFSALLHNKTWH 414
Query: 1502 LTVLPPGKHVIGCRWVFKIKKNANGSFSRHKARLVAKGYTQIAGIDFTDVFSPVIKPATV 1681
L GK++I +WV+KIKK A+G+ R+KARLVAKG+ Q GID+ D FSPV+K AT+
Sbjct: 415 LVPPVKGKNIIDSKWVYKIKKKADGTIDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATI 474
Query: 1682 RLVLTIALAKGWPIRQIDVDNAFLNGDLDKSTEIYMCQPPGFEVAGKSNLVCRLNKALYG 1861
RLVL+IA+++GW +RQ+DV NAFL+G LD+ E+YM QPPGFE A + + +C+L+KALYG
Sbjct: 475 RLVLSIAMSQGWSLRQLDVQNAFLHGYLDE--EVYMRQPPGFEDARQPHFLCKLDKALYG 532
Query: 1862 LNQASKAWFDKLKTVLHSLGFSASKADTYLFFW 1960
L QA +AW+ +L L LGFS+SKADT LFF+
Sbjct: 533 LKQAPRAWYSRLSKKLQELGFSSSKADTSLFFY 565
Score = 188 bits (478), Expect = 1e-45
Identities = 94/178 (52%), Positives = 125/178 (70%), Gaps = 1/178 (0%)
Frame = +3
Query: 492 LVENQTNKRIKMVQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVG 671
+ E +++IK VQ+D G E++ L F GI H VSCP+ QQNG+ ERKH+HI+EVG
Sbjct: 1 MAERLLDRKIKSVQTDWGGEYQRLNSFFQRIGISHHVSCPHAHQQNGSAERKHRHIVEVG 60
Query: 672 LSLLSQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCF 851
LSLL+ + +P KFWD++F T+ YLIN P K I+Y +P L+ P Y+ LR FGC C+
Sbjct: 61 LSLLAHASMPLKFWDEAFLTATYLINRTPMKIIHYDTP-AYLFEEQPDYNALRTFGCACW 119
Query: 852 PHLRPYNKNKLELRSQSSVFLGYSNQFKGYKIL-LPSGKVICSRDVVFNEHIFPFQQI 1022
P+LRPYN +KL RS+ VFLGYS KG+K L + SG+V SRDVVF+E+IFPF Q+
Sbjct: 120 PNLRPYNTHKLAFRSKQCVFLGYSPLHKGFKCLEVNSGRVYISRDVVFDENIFPFAQL 177
>gb|KYP50571.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 553
Score = 244 bits (623), Expect(2) = e-125
Identities = 136/299 (45%), Positives = 189/299 (63%), Gaps = 11/299 (3%)
Frame = +3
Query: 2082 DLGSLHFFLGIEVNYTTQGIL-LTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 2258
DLG ++F GI+V + L LTQ KYI LL + NM +K + T M ++S N
Sbjct: 252 DLGFPNYFPGIQVTQMSNNSLHLTQTKYINDLLKRANMVTAKPVTTRMFQFRVVSLKLTN 311
Query: 2259 S----FSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISG 2426
S LYR I+GSLQYL IT PEI+++VNK+ Q+MQ+P HW+AVK +L Y+ G
Sbjct: 312 SDKDPCENPSLYRSIVGSLQYLIITRPEISFSVNKVCQFMQEPKATHWQAVKRILRYLCG 371
Query: 2427 TTDYGLHLYHSPHLLITGFADSD------DRKSTSGHCIFIGKNLICWSSKTQPTVSRSS 2588
T G+ L S +L I F D+D DRKST+G C+F+G N I WSS+ Q VSRS+
Sbjct: 372 TATTGIVLSKSNNLHIFAFCDADWGVDVDDRKSTTGFCVFLGCNPISWSSRKQQAVSRST 431
Query: 2589 AEAEYHSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEI 2768
EAEY SLA ++ W+K+LL EL++P + P I+ DNLS V +++NPI+ ++TKH E+
Sbjct: 432 IEAEYRSLAAVTAEITWMKNLLHELQVPNIRTPKIYCDNLSAVLLAANPILHSKTKHFEL 491
Query: 2769 DLHFIRDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKLQVAALSSLELRGGV 2945
DL+F+RDKVQ++ V HI + +Q AD FTKPL+ F+ KL++ S + LR V
Sbjct: 492 DLYFVRDKVQKREISVQHIPSLEQTADIFTKPLTYPSFSSCMYKLRLHFCSPISLRESV 550
Score = 234 bits (598), Expect(2) = e-125
Identities = 116/215 (53%), Positives = 153/215 (71%), Gaps = 6/215 (2%)
Frame = +2
Query: 1337 ILTRAKVGIFKPKSYSVALLTEM------EPTNVLDALSNVKWKDAMLQEYTALMKNHTW 1498
++TR+K GIFKPK+Y V T+ EP + +AL+ WK AM QEY AL+ N TW
Sbjct: 1 MITRSKHGIFKPKTYEVTTPTQKLHDPFKEPKTIKEALAIPNWKQAMDQEYNALIHNKTW 60
Query: 1499 DLTVLPPGKHVIGCRWVFKIKKNANGSFSRHKARLVAKGYTQIAGIDFTDVFSPVIKPAT 1678
LT LP G +++GC+W+FK+K NA+G+ +RHKARL+AKG+ Q +G+DFT+ F PV+KP T
Sbjct: 61 VLTHLPVGANLVGCKWIFKVKTNADGTINRHKARLMAKGFNQQSGLDFTETFIPVVKPIT 120
Query: 1679 VRLVLTIALAKGWPIRQIDVDNAFLNGDLDKSTEIYMCQPPGFEVAGKSNLVCRLNKALY 1858
+R VLTIAL+ W +RQ+D+ NAFLNGDL ++ IYM QPPGF G N+VC+L K LY
Sbjct: 121 IRTVLTIALSLNWSLRQLDIANAFLNGDLQET--IYMAQPPGF-TNGDKNMVCKLQKFLY 177
Query: 1859 GLNQASKAWFDKLKTVLHSLGFSASKADTYLFFWI 1963
GL QA +AWF KL L LGF+ +K+D LFF I
Sbjct: 178 GLKQAPRAWFQKLHDTLSVLGFNYAKSDCSLFFRI 212
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 243 bits (619), Expect(2) = e-124
Identities = 123/284 (43%), Positives = 178/284 (62%), Gaps = 8/284 (2%)
Frame = +3
Query: 2082 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGNS 2261
DLG LH+FLGIEV +QG++L+Q Y +L + MS K +TP+ ++ LS G+
Sbjct: 648 DLGDLHYFLGIEVKKVSQGLVLSQAWYASDILKRAGMSICKPASTPLSTTEKLSIEDGDF 707
Query: 2262 FSYGYL--YRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTD 2435
YR I+G+LQYLT+T ++++ VNK+ Q++ P +HW AVK +L YI GT +
Sbjct: 708 LGQNDASHYRSIVGALQYLTLTRSDLSFLVNKVCQFLHSPTTVHWSAVKRILRYIKGTVE 767
Query: 2436 YGLHLYHSPHLLITGFAD------SDDRKSTSGHCIFIGKNLICWSSKTQPTVSRSSAEA 2597
+GL S +LI+ F+D SDDR+ST G +F+G NLI WS++ Q TVSRSS EA
Sbjct: 768 FGLRFGKSDSMLISAFSDADWAGCSDDRRSTGGFAVFLGPNLISWSARKQATVSRSSTEA 827
Query: 2598 EYHSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEIDLH 2777
EY +LA + T+V W++ +L ELRI +W DNL ++S+NP+ ARTKH+EID H
Sbjct: 828 EYKALANATTEVTWVRKILDELRIARPSVAQLWCDNLGATYLSANPVFHARTKHIEIDYH 887
Query: 2778 FIRDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKLQV 2909
F+R++V +K + I DQ+AD FTK L + R+ L +
Sbjct: 888 FVREQVAKKLLDIQFISTTDQLADGFTKSLPAPSLAQYRHNLNL 931
Score = 235 bits (599), Expect(2) = e-124
Identities = 125/253 (49%), Positives = 169/253 (66%), Gaps = 15/253 (5%)
Frame = +2
Query: 1265 VTSPTPI---QTAALPDNTLPPSNTHPILTRAKVGIFKPKSYSVA------LLTEMEPTN 1417
VTSP+P Q+ T T P+ TR + GI KPK Y+ L T EP N
Sbjct: 370 VTSPSPAASEQSEQEQQTTQASDQTRPV-TRLQKGISKPKRYTDGTVRYGCLTTTGEPEN 428
Query: 1418 VLDALSNVKWKDAMLQEYTALMKNHTWDLTVLPPGKHVIGCRWVFKIKKNANGSFSRHKA 1597
+ +A++N W+ AM QEY+A M N TW L GK++I C+W++KIK+ A+GS R+KA
Sbjct: 429 LREAMANSNWRLAMEQEYSAFMSNKTWHLVPPTQGKNIIDCKWMYKIKRKADGSIDRYKA 488
Query: 1598 RLVAKGYTQIAGIDFTDVFSPVIKPATVRLVLTIALAKGWPIRQIDVDNAFLNGDLDKST 1777
RLVAKG+ Q GID+ D FS V+K AT+RL+L+IA++KGW +RQ+DV NAFL+G L++
Sbjct: 489 RLVAKGFKQRYGIDYEDTFSLVVKAATIRLILSIAVSKGWSLRQLDVQNAFLHGYLEE-- 546
Query: 1778 EIYMCQPPGFEVAGKSNLVCRLNKALYGLNQASKAWFDKLKTVLHSLGFSASKADTYLFF 1957
E+YM QPPGFE G+ N +C+L+KALYGL QA +AW+ +L T L LGF +SKADT LFF
Sbjct: 547 EVYMRQPPGFENKGQPNYLCKLDKALYGLKQAPRAWYSRLSTKLQELGFISSKADTSLFF 606
Query: 1958 W------IFLCLY 1978
+ IF+ +Y
Sbjct: 607 YNKGGCTIFILVY 619
>gb|KYP74314.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1275
Score = 189 bits (480), Expect(4) = e-124
Identities = 121/319 (37%), Positives = 161/319 (50%), Gaps = 17/319 (5%)
Frame = +2
Query: 1073 HESHSQPLCTSQSLPNSPNTSSHHLSHNPPFPLHSINIDXXXXXXXXXXXXXXXXQETRV 1252
H HS P T +L + +H PLH I +
Sbjct: 775 HFDHSVPPTTPATLEALDPPALPGFNH----PLHRFGITYERRSHTVVPSNDSSIKPCDS 830
Query: 1253 EPISVTSPTPIQTA------ALPDNTLPPSNTHPILTRAKVGIFKPKSYSV--ALLTEME 1408
P SV+SPT AL + N HPI P Y+ A+ +
Sbjct: 831 TPASVSSPTSAPPTSVDLPIALRKGSRSTCNPHPIYNFLSYHRLSPTYYAFVSAISSITI 890
Query: 1409 PTNVLDALSNVKWKDAMLQEYTALMKNHTWDLTVLPPGKHVIGCRWVFKIKKNANGSFSR 1588
P V +AL++ W+ AM+ E TAL NHTW L PPGK V+GCRWVF +K +G R
Sbjct: 891 PKTVQEALTHPGWRQAMIDEMTALDSNHTWVLVPPPPGKSVVGCRWVFNVKVGPDGQVDR 950
Query: 1589 HKARLVAKGYTQ--IAGIDFTDVFSPVIKPATVRLVLTIALAKGWPIRQIDVDNAFLNGD 1762
KARLVAKGYTQ + G+D+T FSPV K A+V L L + + P+ Q+D+ NAFL+GD
Sbjct: 951 LKARLVAKGYTQVYVYGLDYT--FSPVAKMASVHLFLAMDAMRHCPLFQLDIKNAFLHGD 1008
Query: 1763 LDKSTEIYMCQPPGFEVAGKSNLVCRLNKALYGLNQASKAWFDKLKTVLHSLGFSASKAD 1942
L++ EIYM QPPGF G S LVC+L K+LYGL Q+ +AWF + V+ G + D
Sbjct: 1009 LEE--EIYMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIRCETD 1066
Query: 1943 TYLFF-------WIFLCLY 1978
+FF +I+L +Y
Sbjct: 1067 HSVFFRRSSTHRFIYLVVY 1085
Score = 188 bits (478), Expect(4) = e-124
Identities = 113/282 (40%), Positives = 157/282 (55%), Gaps = 5/282 (1%)
Frame = +3
Query: 258 CSDCAVSKSHKLPFANS-SHKITEPLQLIPTDLWGPAPVQSSNGCSYNVAFVDDFTKFIW 434
C C + K + F NS + + P +I +D+WGP+ V S G Y V F+DDF++ W
Sbjct: 498 CESCQLGKHVRASFPNSINSRAMSPFDVIHSDVWGPSRVPSLLGHRYYVTFIDDFSRCTW 557
Query: 435 IYFFKAKSDTQNAFLHFKNLVENQTNKRIKMVQSDGGTE-FKPLIKTFSES-GIIHKVSC 608
I+ K +S+ N FL F + ++ Q K I++++SD E F K+F S GI+H+ SC
Sbjct: 558 IFLMKNRSELFNIFLSFYSEIKTQFGKVIRILRSDNAKEYFSDCFKSFMASHGILHQSSC 617
Query: 609 PYTPQQNGTVERKHKHIIEVGLSLLSQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPF 788
P+TPQQNG ERKH+HI++ +LL + P K W D+ T+ YLIN +P+ +N + P
Sbjct: 618 PHTPQQNGVAERKHRHIVDTARTLLLNANAPPKLWGDAVLTAGYLINRMPSSVLNDQVPH 677
Query: 789 EALYGHVPTYS-HLRVFGCQCFPHLRPYNKNKLELRSQSSVFLGYSNQFKGYKILLP-SG 962
LY P YS H RVFGC CF H + KL R+ VFLGYS KGY+ P +
Sbjct: 678 SLLYPLEPLYSVHPRVFGCTCFVHDLFSGRAKLSARAIKCVFLGYSRVQKGYRCYSPATH 737
Query: 963 KVICSRDVVFNEHIFPFQQISTLSSSQNSQPRQQILTMNPIP 1088
+ S DV F E F I+T S +S Q+L PIP
Sbjct: 738 RFYTSADVTFFEDTPYF--IATDVSPVDSDLLSQVL---PIP 774
Score = 116 bits (290), Expect(4) = e-124
Identities = 61/161 (37%), Positives = 95/161 (59%), Gaps = 6/161 (3%)
Frame = +3
Query: 2082 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGNS 2261
DLG L +FLGIEV + GI ++Q+KY +L + ++ K + TPM + L QG
Sbjct: 1114 DLGPLRYFLGIEVAQSKSGIAISQRKYALDILEETGLTDCKPVDTPMDPNVKLMPNQGEP 1173
Query: 2262 FSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTDYG 2441
+ YR+++G L YLT+T P+I++ V+ +SQ++ P + HW AV +L YI + G
Sbjct: 1174 YPDPGRYRRLVGKLNYLTMTRPDISFPVSVVSQFLNSPCESHWLAVVRILRYIKRSPGKG 1233
Query: 2442 LHLYHSPHLLITGFADSD------DRKSTSGHCIFIGKNLI 2546
L H I ++D+D DR+STSG+C+F+G NL+
Sbjct: 1234 LVYNDRGHTNIVEYSDADWAGDASDRRSTSGYCVFMGGNLV 1274
Score = 26.9 bits (58), Expect(4) = e-124
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 173 SYVVSSIKPLELWHKRLGHPSFD---NQVYFLFRLCSL 277
S + +SI+ L H+RLGHPS + V L RL SL
Sbjct: 459 STICASIESPGLIHRRLGHPSLNKLKKMVPHLSRLVSL 496
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 246 bits (627), Expect(2) = e-124
Identities = 128/292 (43%), Positives = 184/292 (63%), Gaps = 6/292 (2%)
Frame = +3
Query: 2082 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGNS 2261
DLG L +FLGI+ + L Q KYI LL + M SK TP LS+ G S
Sbjct: 1081 DLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGMS 1140
Query: 2262 FSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTDYG 2441
S YR+ +G+LQY+T+T P+I +AVNK Q+M +P D+HW AVK +L Y+ GT G
Sbjct: 1141 LSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYLKGTIHLG 1200
Query: 2442 LHLYHSPHLLITGFADS------DDRKSTSGHCIFIGKNLICWSSKTQPTVSRSSAEAEY 2603
LH + + + G++D+ DDR+STSG+C+F+G NLI WSS Q VS+SSAE+EY
Sbjct: 1201 LHFQPAASMELQGYSDADWASCPDDRRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEY 1260
Query: 2604 HSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEIDLHFI 2783
L + +++W++SLLQEL +P PP++W DN S +++NP+ +R+KH+E+DLHFI
Sbjct: 1261 RGLVSLTAELVWIQSLLQELCLPT-SPPILWCDNQSAAHLAANPVFHSRSKHIELDLHFI 1319
Query: 2784 RDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKLQVAALSSLELRG 2939
R+KV ++ + ++ + DQ+AD FTK L F +R+KL V L LRG
Sbjct: 1320 REKVLRQELQICYVPSGDQLADIFTKHLPITQFCNLRSKLTV-TYPPLSLRG 1370
Score = 231 bits (589), Expect(2) = e-124
Identities = 115/231 (49%), Positives = 152/231 (65%), Gaps = 2/231 (0%)
Frame = +2
Query: 1274 PTPIQTA--ALPDNTLPPSNTHPILTRAKVGIFKPKSYSVALLTEMEPTNVLDALSNVKW 1447
P P T+ A P P NTHP++TRAK GI K +S+ V TE P A N W
Sbjct: 814 PVPFATSSPAAPSPPPLPLNTHPMVTRAKSGIHKKRSFIVQHTTE--PRTYSQASKNDSW 871
Query: 1448 KDAMLQEYTALMKNHTWDLTVLPPGKHVIGCRWVFKIKKNANGSFSRHKARLVAKGYTQI 1627
AM EY AL++N+TW L P H++GCRW++K+K +GS RHKARLVA+G+TQ
Sbjct: 872 VQAMNSEYQALLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQT 931
Query: 1628 AGIDFTDVFSPVIKPATVRLVLTIALAKGWPIRQIDVDNAFLNGDLDKSTEIYMCQPPGF 1807
GID+ D FSPV+KP T+RL+L +A++ W +RQ+DV+NAFLNGDL++ E++M QP GF
Sbjct: 932 PGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVENAFLNGDLEE--EVFMTQPQGF 989
Query: 1808 EVAGKSNLVCRLNKALYGLNQASKAWFDKLKTVLHSLGFSASKADTYLFFW 1960
VC+L+KALYGL QA +AWF KL+ L GF +S+ADT LF +
Sbjct: 990 VNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTSLFIF 1040
Score = 265 bits (677), Expect = 1e-69
Identities = 134/291 (46%), Positives = 184/291 (63%), Gaps = 3/291 (1%)
Frame = +3
Query: 234 LLIIKFIFCSDCAVSKSHKLPFANSSHKITEPLQLIPTDLWGPAPVQSSNGCSYNVAFVD 413
L I K C C ++KSH LP++ SS + PL LI TDLWGPAP S G Y + F+D
Sbjct: 505 LQINKIAPCIICPLAKSHSLPYSLSSSHASHPLALIHTDLWGPAPSTSITGARYFLIFID 564
Query: 414 DFTKFIWIYFFKAKSDTQNAFLHFKNLVENQTNKRIKMVQSDGGTEFKPLIKTFSESGII 593
D+++ WIYF K +F+ F+ +VENQ IK +QSD G EF GI+
Sbjct: 565 DYSRHTWIYFLSTKDQALQSFITFRKMVENQLQTTIKCIQSDNGGEFLAFKPYLEAHGIL 624
Query: 594 HKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQSGIPNKFWDDSFATSVYLIN*IPNKTIN 773
H+ SCP+TPQQNG ERK +H++E GL+L++QS +P+K+W +F T+VYLIN +P K ++
Sbjct: 625 HQFSCPHTPQQNGRAERKIRHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLH 684
Query: 774 YKSPFEALYGHVPTYSHLRVFGCQCFPHLRPYNKNKLELRSQSSVFLGYSNQFKGYKIL- 950
++SP + L+ +P Y HLRVFGC CFP LRPY ++KL RS + VFLGY+ KGY L
Sbjct: 685 FQSPTQTLFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHKGYLCLD 744
Query: 951 LPSGKVICSRDVVFNEHIFPFQQISTLSSSQNSQPRQQILTMNP--IPSPS 1097
+ + ++ SR+V+F+E FPFQ SSS S P + + P I SPS
Sbjct: 745 VSTNRIYISRNVIFHESSFPFQ-----SSSPPSSPSPHLPSSTPALINSPS 790
>gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 539
Score = 246 bits (627), Expect(2) = e-124
Identities = 131/285 (45%), Positives = 186/285 (65%), Gaps = 10/285 (3%)
Frame = +3
Query: 2085 LGSLHFFLGIEVNYTT-QGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGNS 2261
LGSL +FLGIEV + + ++LTQ KYI LL K N++ + G +PM S+ LS+ +
Sbjct: 247 LGSLDYFLGIEVKHLPDKSLVLTQSKYIRDLLFKTNLAEAHGAPSPMFSNCKLSRSGNDF 306
Query: 2262 FSYGYLYRQIIGSLQYLTITTPEITYAVNKLSQYMQQPLDLHWKAVKGLLHYISGTTDYG 2441
F +R ++G+LQY T+T PEI++AVNK+ Q+M PLD HW AVK +L Y+ GT YG
Sbjct: 307 FHDPTFFRSVVGALQYATLTRPEISFAVNKVCQFMATPLDSHWVAVKRILKYLKGTLSYG 366
Query: 2442 LHLYHSP---HLLITGFADS------DDRKSTSGHCIFIGKNLICWSSKTQPTVSRSSAE 2594
LH+ + + +T F D+ DDR+STSG IF G NLI W S+ Q ++RSS E
Sbjct: 367 LHMQPAAVNGPISLTAFCDADWASDIDDRRSTSGSAIFFGPNLISWWSRKQRVIARSSTE 426
Query: 2595 AEYHSLATSMTDVLWLKSLLQELRIPLHQPPVIWVDNLSVVFMSSNPIVQARTKHVEIDL 2774
AEY S+A + ++ W+++LLQEL++P P ++ DN S V ++ NP+ ++TKH+EID+
Sbjct: 427 AEYRSIAQASAELTWIQALLQELKVPFSTPTLL-CDNQSAVAIAHNPVFHSKTKHMEIDV 485
Query: 2775 HFIRDKVQQKSDLVHHIHAHDQIADCFTKPLSGQFFTRMRNKLQV 2909
F+RDKV K LV+HI A DQ AD TKPLS F + +KL+V
Sbjct: 486 FFVRDKVLSKQLLVYHIPALDQWADLLTKPLSAARFEVLWDKLKV 530
Score = 230 bits (586), Expect(2) = e-124
Identities = 115/218 (52%), Positives = 148/218 (67%), Gaps = 6/218 (2%)
Frame = +2
Query: 1343 TRAKVGIFKPKSYSVALLTEMEPTNVLDALSNVKWKDAMLQEYTALMKNHTWDLTVLPPG 1522
TR+K G P+ + L EP V AL++ W AM QEY ALM NHTWDL LP
Sbjct: 3 TRSKSGFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLPSD 62
Query: 1523 KHVIGCRWVFKIKKNANGSFSRHKARLVAKGYTQIAGIDFTDVFSPVIKPATVRLVLTIA 1702
+ +GC+WVF++K+NA+GS + KARLVAKG+ Q+ G DF + FSPVIKP T+R++LT+A
Sbjct: 63 RKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILTLA 122
Query: 1703 LAKGWPIRQIDVDNAFLNGDLDKSTEIYMCQPPGFEVAGKSNLVCRLNKALYGLNQASKA 1882
L W + Q+DV+NAFLNG L+++ IYM QPPGFE AG +LVC+LNKALYGL QA +
Sbjct: 123 LTNNWNLFQLDVNNAFLNGTLEET--IYMVQPPGFE-AGDKSLVCKLNKALYGLKQAPRQ 179
Query: 1883 WFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 1978
WF+KLK L GF ASK D LF + IF+ +Y
Sbjct: 180 WFNKLKLTLTRFGFQASKCDPSLFQYQHQTHTIFILVY 217