BLASTX nr result
ID: Rehmannia27_contig00022305
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00022305
(807 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AKZ22068.1| NADH dehydrogenase subunit 4 (plastid) [Teucrium ... 79 2e-18
ref|YP_009232094.1| NADH dehydrogenase subunit 4 (chloroplast) [... 77 2e-18
emb|CCQ71672.1| NADH dehydrogenase subunit 4 (chloroplast) [Salv... 78 3e-18
ref|YP_007507162.1| NADH dehydrogenase subunit 4 (chloroplast) [... 78 3e-18
gb|AKZ22065.1| NADH dehydrogenase subunit 4 (plastid) [Monarda f... 75 8e-18
ref|YP_009162312.1| NADH dehydrogenase subunit 4 (chloroplast) [... 79 1e-17
gb|ALO62174.1| NADH dehydrogenase subunit 4 (chloroplast) [Cresc... 75 1e-17
gb|AKZ22066.1| NADH dehydrogenase subunit 4 (plastid) [Nepeta ca... 75 1e-17
gb|AKZ22069.1| NADH dehydrogenase subunit 4 (plastid) [Verbascum... 74 2e-17
gb|AKZ22071.1| NADH dehydrogenase subunit 4 (plastid) [Penstemon... 75 3e-17
gb|AKZ22070.1| NADH dehydrogenase subunit 4 (plastid) [Penstemon... 75 3e-17
ref|YP_007353821.1| NADH dehydrogenase subunit 4 (chloroplast) [... 74 5e-17
gb|AKZ22072.1| NADH dehydrogenase subunit 4 (plastid) [Verbena h... 77 6e-17
ref|YP_003359409.1| NADH dehydrogenase subunit 4 (chloroplast) [... 73 6e-17
ref|YP_009050988.1| NADH-plastoquinone oxidoreductase subunit 4 ... 71 1e-16
ref|YP_009050814.1| NADH-plastoquinone oxidoreductase subunit 4 ... 71 1e-16
gb|AKZ22073.1| NADH dehydrogenase subunit 4 (plastid) [Veronica ... 73 1e-16
gb|AKZ22059.1| NADH dehydrogenase subunit 4 (plastid) [Ellisia n... 73 1e-16
gb|AMQ33880.1| NADH-plastoquinone oxidoreductase subunit 4 (chlo... 74 1e-16
gb|AMQ33792.1| NADH-plastoquinone oxidoreductase subunit 4 (chlo... 74 1e-16
>gb|AKZ22068.1| NADH dehydrogenase subunit 4 (plastid) [Teucrium canadense]
Length = 509
Score = 79.0 bits (193), Expect(2) = 2e-18
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +1
Query: 271 LAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+A++YLVFTTNHFPCLT+IVVLPIFAG LIFFLPHRGNRV
Sbjct: 1 MAQVYLVFTTNHFPCLTIIVVLPIFAGCLIFFLPHRGNRV 40
Score = 42.0 bits (97), Expect(2) = 2e-18
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
RWYTIC+C+LEL LTTYAF
Sbjct: 42 RWYTICMCILELLLTTYAF 60
>ref|YP_009232094.1| NADH dehydrogenase subunit 4 (chloroplast) [Lavandula angustifolia]
gi|977902055|gb|AMA20337.1| NADH dehydrogenase subunit 4
(chloroplast) [Lavandula angustifolia]
Length = 513
Score = 77.4 bits (189), Expect(2) = 2e-18
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +1
Query: 271 LAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+A++YLVFTTNHFPCLT+I VLPIFAG LIFFLPHRGNRV
Sbjct: 1 MAQVYLVFTTNHFPCLTIIAVLPIFAGCLIFFLPHRGNRV 40
Score = 43.1 bits (100), Expect(2) = 2e-18
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
RWYTICIC+LEL LTTYAF
Sbjct: 42 RWYTICICILELLLTTYAF 60
>emb|CCQ71672.1| NADH dehydrogenase subunit 4 (chloroplast) [Salvia miltiorrhiza]
Length = 513
Score = 78.2 bits (191), Expect(2) = 3e-18
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +1
Query: 271 LAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+A+ YLVFTTNHFPCLT+IVVLPIFAG LIFFLPHRGNRV
Sbjct: 1 MAQAYLVFTTNHFPCLTIIVVLPIFAGCLIFFLPHRGNRV 40
Score = 42.0 bits (97), Expect(2) = 3e-18
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
RWYTIC+C+LEL LTTYAF
Sbjct: 42 RWYTICMCILELLLTTYAF 60
>ref|YP_007507162.1| NADH dehydrogenase subunit 4 (chloroplast) [Salvia miltiorrhiza]
gi|401879793|gb|AFQ30980.1| NADH dehydrogenase subunit 4
(chloroplast) [Salvia miltiorrhiza]
Length = 509
Score = 78.2 bits (191), Expect(2) = 3e-18
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +1
Query: 271 LAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+A+ YLVFTTNHFPCLT+IVVLPIFAG LIFFLPHRGNRV
Sbjct: 1 MAQAYLVFTTNHFPCLTIIVVLPIFAGCLIFFLPHRGNRV 40
Score = 42.0 bits (97), Expect(2) = 3e-18
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
RWYTIC+C+LEL LTTYAF
Sbjct: 42 RWYTICMCILELLLTTYAF 60
>gb|AKZ22065.1| NADH dehydrogenase subunit 4 (plastid) [Monarda fistulosa var.
mollis]
Length = 509
Score = 75.5 bits (184), Expect(2) = 8e-18
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = +1
Query: 271 LAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+A+ YLVFTTNHFPCLT+I VLPIF+G LIFFLPHRGNRV
Sbjct: 1 MAQAYLVFTTNHFPCLTIIAVLPIFSGCLIFFLPHRGNRV 40
Score = 43.1 bits (100), Expect(2) = 8e-18
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
RWYTICIC+LEL LTTYAF
Sbjct: 42 RWYTICICILELLLTTYAF 60
>ref|YP_009162312.1| NADH dehydrogenase subunit 4 (chloroplast) [Scutellaria
baicalensis] gi|827345841|gb|AKJ77142.1| NADH
dehydrogenase subunit 4 (chloroplast) [Scutellaria
baicalensis]
Length = 509
Score = 79.0 bits (193), Expect(2) = 1e-17
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +1
Query: 271 LAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+A++YLVFTTNHFPCLT+IVVLPIFAG LIFFLPHRGNRV
Sbjct: 1 MAQVYLVFTTNHFPCLTIIVVLPIFAGCLIFFLPHRGNRV 40
Score = 39.3 bits (90), Expect(2) = 1e-17
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
RWYTICI +LEL LTTYAF
Sbjct: 42 RWYTICISILELLLTTYAF 60
>gb|ALO62174.1| NADH dehydrogenase subunit 4 (chloroplast) [Crescentia cujete]
Length = 509
Score = 75.1 bits (183), Expect(2) = 1e-17
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +1
Query: 271 LAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+A++YLVFTTNHFP LT+IVVLPIFAGSLIFF PHRGNRV
Sbjct: 1 MAQVYLVFTTNHFPWLTIIVVLPIFAGSLIFFFPHRGNRV 40
Score = 43.1 bits (100), Expect(2) = 1e-17
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
RWYTICIC+LEL LTTYAF
Sbjct: 42 RWYTICICILELLLTTYAF 60
>gb|AKZ22066.1| NADH dehydrogenase subunit 4 (plastid) [Nepeta cataria]
Length = 509
Score = 74.7 bits (182), Expect(2) = 1e-17
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +1
Query: 271 LAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+A+ YLVFTTNHFPCLT+I VLPIFAG IFFLPHRGNR+
Sbjct: 1 MAQAYLVFTTNHFPCLTIIAVLPIFAGCFIFFLPHRGNRI 40
Score = 43.1 bits (100), Expect(2) = 1e-17
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
RWYTICIC+LEL LTTYAF
Sbjct: 42 RWYTICICILELLLTTYAF 60
>gb|AKZ22069.1| NADH dehydrogenase subunit 4 (plastid) [Verbascum thapsus]
Length = 509
Score = 74.3 bits (181), Expect(2) = 2e-17
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +1
Query: 271 LAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+A++YLVFT NHFP LT+IVVLPIFAGSLIFFLPHRGNRV
Sbjct: 1 MAQVYLVFTMNHFPFLTIIVVLPIFAGSLIFFLPHRGNRV 40
Score = 42.7 bits (99), Expect(2) = 2e-17
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
RWYTICIC+LEL LTTYAF
Sbjct: 42 RWYTICICVLELLLTTYAF 60
>gb|AKZ22071.1| NADH dehydrogenase subunit 4 (plastid) [Penstemon gracilis]
Length = 509
Score = 75.1 bits (183), Expect(2) = 3e-17
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +1
Query: 271 LAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+A++YLVFTTN+FPCLT IVVLPI AGSLIFFLPHRGNRV
Sbjct: 1 MAQVYLVFTTNYFPCLTTIVVLPILAGSLIFFLPHRGNRV 40
Score = 41.6 bits (96), Expect(2) = 3e-17
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
RWYTICIC+LEL LTTY F
Sbjct: 42 RWYTICICILELLLTTYVF 60
>gb|AKZ22070.1| NADH dehydrogenase subunit 4 (plastid) [Penstemon angustifolius]
Length = 509
Score = 75.1 bits (183), Expect(2) = 3e-17
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +1
Query: 271 LAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+A++YLVFTTN+FPCLT IVVLPI AGSLIFFLPHRGNRV
Sbjct: 1 MAQVYLVFTTNYFPCLTTIVVLPILAGSLIFFLPHRGNRV 40
Score = 41.6 bits (96), Expect(2) = 3e-17
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
RWYTICIC+LEL LTTY F
Sbjct: 42 RWYTICICILELLLTTYVF 60
>ref|YP_007353821.1| NADH dehydrogenase subunit 4 (chloroplast) [Chrysanthemum x
morifolium] gi|452849105|ref|YP_007474783.1| NADH
dehydrogenase subunit 4 (chloroplast) [Chrysanthemum
indicum] gi|372863260|gb|AEX99332.1| NADH dehydrogenase
subunit 4 (chloroplast) [Chrysanthemum indicum]
gi|372863500|gb|AEX99569.1| NADH dehydrogenase subunit 4
(chloroplast) [Chrysanthemum indicum]
gi|375298891|gb|AFA45330.1| NADH dehydrogenase subunit 4
(chloroplast) [Chrysanthemum x morifolium]
Length = 512
Score = 73.6 bits (179), Expect(2) = 5e-17
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +1
Query: 262 LIFLAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+ FL + YLVFTTN FP LT+IVVLPIFAGSLIFFLPH+GNRV
Sbjct: 1 MFFLVQAYLVFTTNKFPWLTIIVVLPIFAGSLIFFLPHKGNRV 43
Score = 42.4 bits (98), Expect(2) = 5e-17
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF*FCQQL 467
RWYTICIC+LEL LTTY F + QL
Sbjct: 45 RWYTICICMLELLLTTYVFCYHFQL 69
>gb|AKZ22072.1| NADH dehydrogenase subunit 4 (plastid) [Verbena hastata]
Length = 512
Score = 76.6 bits (187), Expect(2) = 6e-17
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +1
Query: 271 LAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+A++YLVFTTNHFP LT+IVVLPIFAGSLIFFLPHRGNRV
Sbjct: 1 MAQVYLVFTTNHFPFLTIIVVLPIFAGSLIFFLPHRGNRV 40
Score = 38.9 bits (89), Expect(2) = 6e-17
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
RWYT+CI +LEL LTTYAF
Sbjct: 42 RWYTVCISILELLLTTYAF 60
>ref|YP_003359409.1| NADH dehydrogenase subunit 4 (chloroplast) [Olea europaea]
gi|281428737|gb|ADA69976.1| NADH dehydrogenase subunit 4
(chloroplast) [Olea europaea]
Length = 509
Score = 73.2 bits (178), Expect(2) = 6e-17
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +1
Query: 271 LAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+A++YLVFTTNHFP LT+IV+LPI AGSLIFFLPHRGNRV
Sbjct: 1 MAQVYLVFTTNHFPWLTIIVILPISAGSLIFFLPHRGNRV 40
Score = 42.4 bits (98), Expect(2) = 6e-17
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
RWYTICIC+LEL +TTYAF
Sbjct: 42 RWYTICICILELLITTYAF 60
>ref|YP_009050988.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Camellia
reticulata] gi|667670478|gb|AIG61652.1|
NADH-plastoquinone oxidoreductase subunit 4
(chloroplast) [Camellia reticulata]
Length = 510
Score = 70.9 bits (172), Expect(2) = 1e-16
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +1
Query: 280 LYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVT 393
+YLVFTTN+FP LT+IVV PIFAGSLIFFLPHRGNR T
Sbjct: 1 MYLVFTTNYFPWLTIIVVFPIFAGSLIFFLPHRGNRAT 38
Score = 43.9 bits (102), Expect(2) = 1e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +3
Query: 384 QSNRWYTICICLLELFLTTYAF 449
++ RWYTICIC+LEL LTTYAF
Sbjct: 36 RATRWYTICICILELLLTTYAF 57
>ref|YP_009050814.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Camellia
petelotii] gi|667670302|gb|AIG61478.1|
NADH-plastoquinone oxidoreductase subunit 4
(chloroplast) [Camellia petelotii]
Length = 510
Score = 70.9 bits (172), Expect(2) = 1e-16
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +1
Query: 280 LYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVT 393
+YLVFTTN+FP LT+IVV PIFAGSLIFFLPHRGNR T
Sbjct: 1 MYLVFTTNYFPWLTIIVVFPIFAGSLIFFLPHRGNRAT 38
Score = 43.9 bits (102), Expect(2) = 1e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +3
Query: 384 QSNRWYTICICLLELFLTTYAF 449
++ RWYTICIC+LEL LTTYAF
Sbjct: 36 RATRWYTICICILELLLTTYAF 57
>gb|AKZ22073.1| NADH dehydrogenase subunit 4 (plastid) [Veronica americana]
Length = 509
Score = 73.2 bits (178), Expect(2) = 1e-16
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +1
Query: 271 LAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+A++YLVFTTNHFP LT+IVVLPIFAGSLIF LPH+GNRV
Sbjct: 1 MAQVYLVFTTNHFPFLTIIVVLPIFAGSLIFLLPHKGNRV 40
Score = 41.6 bits (96), Expect(2) = 1e-16
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF*F-CQQLCNFTRIGDWSQWV 506
RWYTICIC+LEL L TYAF + Q + ++G+ W+
Sbjct: 42 RWYTICICMLELLLMTYAFCYHFQSDDSLIQLGEDYNWI 80
>gb|AKZ22059.1| NADH dehydrogenase subunit 4 (plastid) [Ellisia nyctelea]
Length = 509
Score = 73.2 bits (178), Expect(2) = 1e-16
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +1
Query: 271 LAKLYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+ ++YLVFTTN+FP LT+IVVLPIFAGSLIFFLPHRGNRV
Sbjct: 1 MVQMYLVFTTNYFPWLTIIVVLPIFAGSLIFFLPHRGNRV 40
Score = 41.2 bits (95), Expect(2) = 1e-16
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
+WYT+CIC+LEL LTTYAF
Sbjct: 42 KWYTLCICILELLLTTYAF 60
>gb|AMQ33880.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Stachys
byzantina]
Length = 506
Score = 73.6 bits (179), Expect(2) = 1e-16
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +1
Query: 280 LYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+YLVFTTNHFPCLT+IVVLPIF G IFFLPHRGNRV
Sbjct: 1 MYLVFTTNHFPCLTIIVVLPIFVGCFIFFLPHRGNRV 37
Score = 40.8 bits (94), Expect(2) = 1e-16
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
RWYTIC+C LEL LTTYAF
Sbjct: 39 RWYTICMCTLELLLTTYAF 57
>gb|AMQ33792.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Stachys
sylvatica]
Length = 506
Score = 73.6 bits (179), Expect(2) = 1e-16
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +1
Query: 280 LYLVFTTNHFPCLTLIVVLPIFAGSLIFFLPHRGNRV 390
+YLVFTTNHFPCLT+IVVLPIF G IFFLPHRGNRV
Sbjct: 1 MYLVFTTNHFPCLTIIVVLPIFVGCFIFFLPHRGNRV 37
Score = 40.8 bits (94), Expect(2) = 1e-16
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 393 RWYTICICLLELFLTTYAF 449
RWYTIC+C LEL LTTYAF
Sbjct: 39 RWYTICMCTLELLLTTYAF 57