BLASTX nr result
ID: Rehmannia27_contig00022268
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00022268
(1413 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group] 369 e-112
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 370 e-112
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 365 e-111
gb|KYP41330.1| Retrovirus-related Pol polyprotein from transposo... 346 e-110
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 361 e-109
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] 356 e-109
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 358 e-108
ref|XP_007033616.1| Uncharacterized protein TCM_019778 [Theobrom... 342 e-107
ref|XP_010675350.1| PREDICTED: uncharacterized protein LOC104891... 308 1e-98
gb|KYP75006.1| Retrovirus-related Pol polyprotein from transposo... 311 2e-96
gb|KYP58997.1| Retrovirus-related Pol polyprotein from transposo... 304 1e-90
gb|KYP65916.1| Retrovirus-related Pol polyprotein from transposo... 291 2e-90
ref|XP_007030765.1| Uncharacterized protein TCM_026511 [Theobrom... 276 1e-78
ref|XP_007014929.1| Uncharacterized protein TCM_040529 [Theobrom... 273 1e-77
gb|KYP45601.1| Retrovirus-related Pol polyprotein from transposo... 262 2e-77
gb|KYP77007.1| Retrovirus-related Pol polyprotein from transposo... 271 4e-77
gb|AAT38797.2| Polyprotein, putative [Solanum demissum] 268 2e-75
ref|XP_015940984.1| PREDICTED: DNA-directed RNA polymerase II su... 261 3e-73
emb|CAN83567.1| hypothetical protein VITISV_030380 [Vitis vinifera] 248 1e-72
emb|CAN69620.1| hypothetical protein VITISV_008603 [Vitis vinife... 246 8e-72
>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
Length = 1314
Score = 369 bits (946), Expect = e-112
Identities = 199/472 (42%), Positives = 291/472 (61%), Gaps = 4/472 (0%)
Frame = +1
Query: 7 MHQGVSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNENVQ 186
+ QGV++++ PRI G K SKEAW+ LK++F G +KV+++KLQ L R F NL MK++E V+
Sbjct: 69 IQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNLLMKESEKVK 128
Query: 187 EFFSRVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDELMG 366
++FSRV +VNQ+R + + I D+K+VEK+L SLP K+E+IVAAIEESKDLSTL++ +LM
Sbjct: 129 DYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTLTIQQLMS 188
Query: 367 SLEAHEKRMSRFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXXXX 546
SLE+HE+R + S+E AFQ K S +N R N +
Sbjct: 189 SLESHEERKLQREGSSIENAFQSKLSF-RPQNSRFRGN-FQKNGFPMRDRGYFQKNGFST 246
Query: 547 XXXXXXXXXXXXXXXXDLYCRICRKNNHDTKDC--RFKCKRCRNANHSQRDCWHKDDGDT 720
+L+C I +K++H T C + C +C+ H + C ++
Sbjct: 247 QKEDGQERREKSTSSSNLWCDISQKSSHTTDMCWKKMTCNKCKRKGHIAKYCRTRE---I 303
Query: 721 NEANLSEEKEPNQ-VFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVKL 897
N AN S+EKE ++ + FSC +Q++ +++W +DSGC+NHM + +F +D Y +++ +
Sbjct: 304 NRANFSQEKEKSEEMVFSCHTAQEEKDDVWVIDSGCTNHMAADPNLFREMDSLYHAKIHM 363
Query: 898 GDGKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCI 1077
G+G + GKG +AVQT +G IKDV VPDL QNLLS+GQLLE Y V F + C
Sbjct: 364 GNGSIAQSEGKGTVAVQTADGP-KFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCK 422
Query: 1078 IIDKQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLK 1257
I+D++ N +AKI M N+ F L + T ++AL+S + +LWH R GHL+Y+ L LL+
Sbjct: 423 ILDRKNNRLVAKINMEKNRNFLLRMNHTTQMALRSEVDIS-DLWHKRMGHLNYRALKLLR 481
Query: 1258 KKNMVFGLPNIPDRDKTCEGCIFGKMHRLPFPKT-SYRAKAPLEIVHADICG 1410
K MV GLP I + CEGC+FGK + FP + ++RA AP E+VH DI G
Sbjct: 482 TKGMVQGLPFITLKSDPCEGCVFGKQIQASFPHSGAWRASAPFELVHTDIVG 533
>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 370 bits (950), Expect = e-112
Identities = 203/472 (43%), Positives = 278/472 (58%), Gaps = 2/472 (0%)
Frame = +1
Query: 4 FMHQGVSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNENV 183
F+ Q V ++I +I T+KEAW LK F G KVI++KLQ+L RDF+ L MK+ E+V
Sbjct: 70 FIQQAVHESIFSKIAAXTTAKEAWTTLKTAFQGSSKVITVKLQSLRRDFETLHMKNGESV 129
Query: 184 QEFFSRVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDELM 363
Q+F SRV+ +VNQ+R + + I D+ +V KVLRSL KF+H+VAAIEESKDLST S DELM
Sbjct: 130 QDFLSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDELM 189
Query: 364 GSLEAHEKRMSRFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXXX 543
GSL++HE R+SR ++ E+ F K S+++N + A
Sbjct: 190 GSLQSHEVRLSRTEEKNEEKXFYTKGETSDQKNGGREATG-------------------- 229
Query: 544 XXXXXXXXXXXXXXXXXDLYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDTN 723
R C + + R R +Q +CW K+ +
Sbjct: 230 ---------------------RGCGRGGAHGRG-----GRGRGRGDAQXECWKKERQE-K 262
Query: 724 EANLSEEKEPNQVFFSCLNSQQ-QIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVKLG 900
+AN E++E F N + NIW++DSGCSNHM G K +F LDES+ +VKLG
Sbjct: 263 QANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLG 322
Query: 901 DGKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCII 1080
D K ++ GKG AV G + ++ +V+++P LTQNLLSVGQL+ Y + F+ C+I
Sbjct: 323 DDKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVI 382
Query: 1081 IDKQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKK 1260
DK+ + + ++M++NK+FPL + EK AL +E NLWHLRYGHL+ KGL LL K
Sbjct: 383 KDKKSDQIIVBVRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSK 442
Query: 1261 KNMVFGLPNIPDRDKTCEGCIFGKMHRLPFPK-TSYRAKAPLEIVHADICGP 1413
K MVFGLP I D CEGCI+GK + PFPK S RA + LEI+HAD+CGP
Sbjct: 443 KEMVFGLPKI-DSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGP 493
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 365 bits (938), Expect = e-111
Identities = 199/471 (42%), Positives = 277/471 (58%), Gaps = 2/471 (0%)
Frame = +1
Query: 7 MHQGVSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNENVQ 186
+ Q + I PRI+ V+TSK+AWEILK+++ G +KVI++KLQ L RDF+ L M +NE+VQ
Sbjct: 68 IQQALDDEIFPRISAVETSKQAWEILKQEYFGDDKVITVKLQTLRRDFETLFMNENESVQ 127
Query: 187 EFFSRVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDELMG 366
+ SR S +VN++R + + I+++ +V KVLRSL KFEH+V AIEESKDLST S DELM
Sbjct: 128 GYLSRTSAIVNRMRSYGEKIDNQIVVSKVLRSLTTKFEHVVTAIEESKDLSTYSFDELMS 187
Query: 367 SLEAHEKRMSRFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXXXX 546
SL AHE R++R + E+AFQVK S + E A +
Sbjct: 188 SLLAHEDRLNRSREKVQEKAFQVKGEFSYKGKAENSAGRGHGRGN-------FRGRGRGG 240
Query: 547 XXXXXXXXXXXXXXXXDLYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDTNE 726
++ CR C+K H + DCW K + +
Sbjct: 241 SGRGRNQVGEFRQYKSNIQCRYCKK-----------------FGHKEVDCWTKQKDEQKD 283
Query: 727 ANLSEE-KEPNQVFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVKLGD 903
AN ++ +E +++F + + +W++DSGCSNHM +K +F +LDES SEV+LGD
Sbjct: 284 ANFTQNVEEESKLFMASSQITESANAVWFIDSGCSNHMSSSKSLFRDLDESQKSEVRLGD 343
Query: 904 GKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIII 1083
K I GKG + ++T +G + + DV YVP L NLLSVGQL+ Y V F ++ C I
Sbjct: 344 DKQVHIEGKGTVEIKTVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIK 403
Query: 1084 DKQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKK 1263
DK+ T+A++ M+ NK+FPL++ AL + E NLWHLRYGHL+ L LL +K
Sbjct: 404 DKESGRTIARVPMTQNKMFPLDISNVGNSALVVKEKNETNLWHLRYGHLNVNWLKLLVQK 463
Query: 1264 NMVFGLPNIPDRDKTCEGCIFGKMHRLPFP-KTSYRAKAPLEIVHADICGP 1413
+MV GLPNI + D CEGCI+GK R FP S+RA LE+VHAD+CGP
Sbjct: 464 DMVIGLPNIKELD-LCEGCIYGKQTRKSFPVGKSWRATTCLELVHADLCGP 513
>gb|KYP41330.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 604
Score = 346 bits (887), Expect = e-110
Identities = 187/472 (39%), Positives = 286/472 (60%), Gaps = 7/472 (1%)
Frame = +1
Query: 19 VSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNENVQEFFS 198
++ I PRI G T+KEAW L+++F G EKV ++KLQ L R+F+ L+MK++E V++++S
Sbjct: 1 MTDTIFPRIMGATTAKEAWTTLQEEFEGSEKVRAVKLQTLRRNFELLNMKESETVKDYYS 60
Query: 199 RVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDELMGSLEA 378
++ +VNQ+R H + I DKKIVEKVL S+P K++ IV IE++KDLSTLS+ ELMGSLEA
Sbjct: 61 KIKEIVNQMRAHGENILDKKIVEKVLISVPRKYDPIVTIIEQTKDLSTLSVTELMGSLEA 120
Query: 379 HEKRMSRFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXXXXXXXX 558
+E+R++R S E AFQ K + +N++KR N
Sbjct: 121 YEQRLNRHDEDSTENAFQSKLKL-RSQNKDKRNNGETSRNKENCRNFSRNYQNEYPP--- 176
Query: 559 XXXXXXXXXXXXDLYCRICRKNNHDTKDCRFK----CKRCRNANHSQRDCWHKDDGDTNE 726
C IC++ NH KDCR++ C+ C+ H ++ C +K+ ++
Sbjct: 177 ---------------CGICKRTNHAEKDCRYRGKPQCRHCKKFGHVEKYCRNKNK---HQ 218
Query: 727 ANLSEEKEPNQ-VFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVKLGD 903
AN +EEK Q +F++ +S + WY+DSGCSNHM + +F ++DES +V++G+
Sbjct: 219 ANFAEEKNGEQHLFYATQDSNSETSGSWYLDSGCSNHMAKDASIFKDIDESVKVKVRMGN 278
Query: 904 GKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIII 1083
+ GKG + V+T++G +I DV VP+L +NLLS+GQ++EK Y + F D C I
Sbjct: 279 DIVVESKGKGTVMVETKKGT-RLITDVLLVPNLKENLLSIGQMMEKGYTLHFEGDTCKIY 337
Query: 1084 DKQKNLTMAKIKMSS-NKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKK 1260
D +K L + ++KM N+ FP++L IA+++ + + LWH R+GH + L LL +
Sbjct: 338 DNKK-LEIGRVKMEKRNRSFPISLRQGPNIAMKAEVD-DSWLWHRRFGHFNTHALKLLYQ 395
Query: 1261 KNMVFGLPNIPDRDKTCEGCIFGKMHRLPFPK-TSYRAKAPLEIVHADICGP 1413
KNM+ LP + + + CEGC+ GK HRLPF ++R K LE++H DICGP
Sbjct: 396 KNMMRDLPCLKENSEACEGCLLGKQHRLPFSTGKAWRVKDLLELIHIDICGP 447
>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711922|gb|ABF99717.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1335
Score = 361 bits (926), Expect = e-109
Identities = 199/472 (42%), Positives = 287/472 (60%), Gaps = 4/472 (0%)
Frame = +1
Query: 7 MHQGVSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNENVQ 186
+ QGV++++ PRI G K SKEAW+ LK++F G +KV+++KLQ L R F NL MK++E V+
Sbjct: 69 IQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNLLMKESEKVK 128
Query: 187 EFFSRVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDELMG 366
++FSRV +VNQ+R + + I D+K+VEK+L SLP K+E+IVAA EESKDLS
Sbjct: 129 DYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAATEESKDLSK-------D 181
Query: 367 SLEAHEKRMSRFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXXXX 546
SLE+HE+R + S+E AFQ K S +N R N +
Sbjct: 182 SLESHEERKLQREGSSIENAFQSKLSF-RPQNSRFRGN-FQKNGFPMRDRGYFQKNGFSR 239
Query: 547 XXXXXXXXXXXXXXXXDLYCRICRKNNHDTKDC--RFKCKRCRNANHSQRDCWHKDDGDT 720
+L+C IC+K++H T C + C +C+ H + C ++
Sbjct: 240 QKEDGQERREKGTSSSNLWCDICQKSSHTTDMCWKKMTCNKCKRKGHIAKYCRTRE---I 296
Query: 721 NEANLSEEKEPNQ-VFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVKL 897
N AN S+EKE ++ + FSC +Q++ +++W +DSGC+NHM + +F +D SY +++ +
Sbjct: 297 NRANFSQEKEKSEEMVFSCHTAQEEKDDVWVIDSGCTNHMAADPNLFREMDSSYHAKIHM 356
Query: 898 GDGKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCI 1077
G+G + GKG +AVQT +G IKDV VPDL QNLLS+GQLLE Y V F + C
Sbjct: 357 GNGSIAQSEGKGTVAVQTADGP-KFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCK 415
Query: 1078 IIDKQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLK 1257
I+D++ N +AKI M N+ F L + T ++AL+S + +LWH R GHL+Y+ L LL+
Sbjct: 416 ILDRKNNRLVAKINMEKNRNFLLRMNHTTQMALRSEVDIS-DLWHKRMGHLNYRALKLLR 474
Query: 1258 KKNMVFGLPNIPDRDKTCEGCIFGKMHRLPFPKT-SYRAKAPLEIVHADICG 1410
K MV GLP I + CEGC+FGK R FP + ++RA APLE+VHADI G
Sbjct: 475 TKGMVQGLPFITLKSDPCEGCVFGKQIRASFPHSGAWRASAPLELVHADIVG 526
>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
Length = 1109
Score = 356 bits (914), Expect = e-109
Identities = 194/454 (42%), Positives = 267/454 (58%), Gaps = 2/454 (0%)
Frame = +1
Query: 58 TSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNENVQEFFSRVSTVVNQIRGHS 237
T K++ + Q G KVI++KLQ+L RDF+ L MK+ E+VQ+F SRV+ +VNQ+R +
Sbjct: 61 TKKDSKALFFIQQAGSSKVITVKLQSLRRDFETLHMKNGESVQDFLSRVAAIVNQMRSYG 120
Query: 238 DTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDELMGSLEAHEKRMSRFSSQSL 417
+ I D+ +V KVLRSL KF+H+VAAIEESKDLST S DELMGSL++HE R+SR ++
Sbjct: 121 EDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSLQSHEXRLSRTXEKNE 180
Query: 418 EQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXD 597
E+ F K S+++N + A D
Sbjct: 181 EKTFYTKGETSDQKNGGREATGRGRGRGGAHGRGG------------------RXRGRGD 222
Query: 598 LYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDTNEANLSEEKEPNQVFFSCL 777
+ +C C+ H Q +CW K+ + +AN E++E F
Sbjct: 223 AQGDQRQSTEKSRNKSNIQCYYCKRFGHVQAECWKKERQE-KQANYVEQEEDQVKLFMAY 281
Query: 778 NSQQQIEN-IWYVDSGCSNHMCGNKKMFVNLDESYSSEVKLGDGKSRKITGKGEIAVQTR 954
N + N IW++DSGCSNHM G K +F LDES+ +VKLGD K + GKG +AV
Sbjct: 282 NEEVVXSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGTVAVNNG 341
Query: 955 EGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIKMSSNK 1134
G + ++ +V+++P LTQNLLSVGQL+ Y + F+ C+I DK+ + + ++M++NK
Sbjct: 342 HGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGSTCVIKDKKFDQIIVDVRMAANK 401
Query: 1135 IFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPDRDKTCE 1314
+FPL + EK AL +E NLWHLRYGHL+ KGL LL KK MVFGLP I D CE
Sbjct: 402 LFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKI-DSVNVCE 460
Query: 1315 GCIFGKMHRLPFPK-TSYRAKAPLEIVHADICGP 1413
GCI+GK + PFPK S RA + LEI+HAD+CGP
Sbjct: 461 GCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGP 494
>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 358 bits (918), Expect = e-108
Identities = 199/472 (42%), Positives = 273/472 (57%), Gaps = 2/472 (0%)
Frame = +1
Query: 4 FMHQGVSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNENV 183
F+ Q V ++I +I T+KEAW LK F G KVI++KLQ+L RDF+ L MK+ E++
Sbjct: 70 FIQQAVHESIFSKIAAATTAKEAWTTLKTAFQGSSKVITVKLQSLRRDFETLHMKNGESM 129
Query: 184 QEFFSRVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDELM 363
Q+FF + I D+ +V KVLRSL KF+H+VAAIEESKDLST S DELM
Sbjct: 130 QDFFVK-------------NILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDELM 176
Query: 364 GSLEAHEKRMSRFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXXX 543
GSL++HE R+SR ++ E+AF K S+++N + A
Sbjct: 177 GSLQSHEVRLSRTEEKNEEKAFYTKGETSDQKNGGREATGRGRGRGGAHGRGGRGRGRGD 236
Query: 544 XXXXXXXXXXXXXXXXXDLYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDTN 723
Y R + N + + +C C+ H Q +CW K+ +
Sbjct: 237 AQG----------------YQRQSTEKNRNKSN--IQCYYCKRFGHVQXECWKKERQE-K 277
Query: 724 EANLSEEKEPNQVFFSCLNSQQ-QIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVKLG 900
+AN E++E F N + NIW++DSGCSNHM G K +F LDES+ +VKLG
Sbjct: 278 QANYVEQEEDQVKLFMXYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLG 337
Query: 901 DGKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCII 1080
D K + GKG +AV G + ++ +V+++P LTQNLLSVGQL+ Y + F+ C+I
Sbjct: 338 DDKQVXVEGKGIMAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVI 397
Query: 1081 IDKQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKK 1260
DK+ + + ++M++NK+FPL + EK AL +E NLWHLRYGHL+ KGL LL K
Sbjct: 398 KDKKSDQIIVNVRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSK 457
Query: 1261 KNMVFGLPNIPDRDKTCEGCIFGKMHRLPFPK-TSYRAKAPLEIVHADICGP 1413
K MVFGLP I D CEGCI+GK + PFPK S RA + LEI+HAD+CGP
Sbjct: 458 KEMVFGLPKI-DSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGP 508
>ref|XP_007033616.1| Uncharacterized protein TCM_019778 [Theobroma cacao]
gi|508712645|gb|EOY04542.1| Uncharacterized protein
TCM_019778 [Theobroma cacao]
Length = 704
Score = 342 bits (878), Expect = e-107
Identities = 182/472 (38%), Positives = 273/472 (57%), Gaps = 2/472 (0%)
Frame = +1
Query: 4 FMHQGVSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNENV 183
F+ Q V + I RI TS EAW+ILKK+F G KVI++KLQ R+F+ LSMK NE V
Sbjct: 32 FIQQAVHETIFSRIAAATTSLEAWQILKKKFQGSSKVITVKLQTYRREFETLSMKSNEFV 91
Query: 184 QEFFSRVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDELM 363
Q + SRVS++VNQ++ + + I ++ +V KVLRSL KFEHIVAAIEE+ DLS S DELM
Sbjct: 92 QTYLSRVSSLVNQMKSYGEDISEETVVAKVLRSLTPKFEHIVAAIEEAHDLSNYSFDELM 151
Query: 364 GSLEAHEKRMSRFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXXX 543
SL+AHE+R+ R ++ E+AFQV + +E E
Sbjct: 152 SSLQAHEERLFRSHEKNEEKAFQVNEESNLKETLENSTGGGRGRVGFRGKGHGRG----- 206
Query: 544 XXXXXXXXXXXXXXXXXDLYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDTN 723
R ++N + ++ F+C C+ H CW K + N
Sbjct: 207 ---------------------RSRGRSNEERQNKTFQCYYCKKPGHRAAYCWQKQKDENN 245
Query: 724 EANLSEEKEPN-QVFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVKLG 900
+A+ E+ + ++F + ++Q ++W++DSGCSNHM G + +F LDES ++V LG
Sbjct: 246 QASFVEKSDEEIRLFMAFFYEKEQSNDVWFLDSGCSNHMSGTRSLFKELDESNKTDVTLG 305
Query: 901 DGKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCII 1080
+ K ++ G+G I+++T +G I++ V VPDL+ NLLS+ QL+ Y + F++ C I
Sbjct: 306 NSKKIRVEGRGTISIKTSQGNAKILQYVMLVPDLSHNLLSIVQLMISGYSILFDDGFCTI 365
Query: 1081 IDKQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKK 1260
+K+ + K+ M+ NK+FPL + + E A+ + ++E L HL YGHL+ GL LL +
Sbjct: 366 KNKKFKQIITKVPMAKNKMFPLEVSMIENYAMVANGDSEARLSHLHYGHLNINGLKLLSQ 425
Query: 1261 KNMVFGLPNIPDRDKTCEGCIFGKMHRLPF-PKTSYRAKAPLEIVHADICGP 1413
K MVFGLP + + CEGC++GK + PF ++R LE+VHAD+CGP
Sbjct: 426 KEMVFGLPKLENLG-FCEGCVYGKQSKKPFLVGKAWRVSKCLELVHADLCGP 476
>ref|XP_010675350.1| PREDICTED: uncharacterized protein LOC104891365 [Beta vulgaris subsp.
vulgaris]
Length = 326
Score = 308 bits (788), Expect = 1e-98
Identities = 154/342 (45%), Positives = 210/342 (61%), Gaps = 4/342 (1%)
Frame = +1
Query: 391 MSRFSSQSLEQAFQVKASIS---EEENQEKRANSXXXXXXXXXXXXXYXXXXXXXXXXXX 561
M RF+ QSLEQAFQ K S E +N + Y
Sbjct: 1 MRRFTEQSLEQAFQAKLKFSNNGENKNGYDKNFQRGTSYNRGRRRGNYKNQVTRENNQSG 60
Query: 562 XXXXXXXXXXXDLYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDTNEANLSE 741
YC +C+KN H+T+DCR KC RCR H ++D W + EAN +E
Sbjct: 61 S------------YCNLCKKNGHNTQDCRSKCNRCRKHTHFEKDRWFRQK---EEANFAE 105
Query: 742 EKEP-NQVFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVKLGDGKSRK 918
KEP +Q+F++CLN+ Q+ ++WY+DSGCSNHM GNK FV+LDE+ +++ LGDG +++
Sbjct: 106 NKEPKDQLFYTCLNAHQESNDLWYIDSGCSNHMTGNKNSFVSLDENIKTQITLGDGSNQE 165
Query: 919 ITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKN 1098
+ GKG I V+ R I VFYVP L QNLLSVGQL+++ Y V+F+ + C+I DK+K
Sbjct: 166 LAGKGTIVVRARNDSSKFIHKVFYVPRLAQNLLSVGQLMQRSYMVKFDANKCLIFDKRKG 225
Query: 1099 LTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFG 1278
+ +M+ KIFPL + L +AL S + E LWHLR+GHL++ L LLK+K MV G
Sbjct: 226 QLITNTQMAPTKIFPLRMQLEHNVALSSMVD-ESILWHLRFGHLNFNSLKLLKRKEMVTG 284
Query: 1279 LPNIPDRDKTCEGCIFGKMHRLPFPKTSYRAKAPLEIVHADI 1404
LP I + K CEGCI+G+MHRLPFP +S+RA+APLE+VHAD+
Sbjct: 285 LPPISNERKICEGCIYGEMHRLPFPTSSWRARAPLELVHADL 326
>gb|KYP75006.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 617
Score = 311 bits (798), Expect = 2e-96
Identities = 178/486 (36%), Positives = 267/486 (54%), Gaps = 17/486 (3%)
Frame = +1
Query: 7 MHQGVSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNENVQ 186
+++ V ++ +I K+SKEAW+IL+K G E+V ++LQ L + +N+ MK++E V
Sbjct: 49 LYRAVDESGFEKIANAKSSKEAWDILEKAKKGDERVKQVRLQTLRGELENMRMKESEGVS 108
Query: 187 EFFSRVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDELMG 366
EF +RV TV N++ + + + ++VEK+LRSL FE+IV AIEESKDLSTL+++EL G
Sbjct: 109 EFITRVETVANKLNRNGENLPSSRVVEKILRSLTDDFENIVCAIEESKDLSTLTVEELTG 168
Query: 367 SLEAHEKRMS--RFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXX 540
SLEA+E+R + +SLEQA Q KA+I EE+ + R +
Sbjct: 169 SLEAYEQRKKNKKEKGESLEQALQAKATIKEEKARGGRGQAWGGRGQTWGGRSN------ 222
Query: 541 XXXXXXXXXXXXXXXXXXDLYCRICRKNNHDTKDC-RFKCKRCRNANHSQRDCWHKDDGD 717
++ C C K H K+C KC C N H +DC + +
Sbjct: 223 ---------------TNNNIECYNCGKYGHVAKECYSIKCYNCGNLGHISKDCRSEKKRE 267
Query: 718 TNEANLSEEKEPNQVFFSCL-------NSQQQIE------NIWYVDSGCSNHMCGNKKMF 858
L+EE++ + + + + +I+ ++WY+D+G SNHMCG++ +F
Sbjct: 268 EPTNFLAEEEDEGLLLVTTIPEVEIKPSCSSEIKPSCSDNSVWYLDTGASNHMCGDEHLF 327
Query: 859 VNLDESYSSEVKLGDGKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLE 1038
L + V GD + G+G I Q R GK+ I DV+YVPDL N+LS+GQL+E
Sbjct: 328 KMLSKEEFGSVSFGDASKVVVKGRGTIWYQQRNGKIGEIGDVYYVPDLKSNILSMGQLME 387
Query: 1039 KDYKVEFNNDHCIIIDKQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLR 1218
K Y V + + DK L +A+++M N+++ L L + + +Q E E WHLR
Sbjct: 388 KGYSVLMKDRELQLKDKLGRL-IAQVEMKKNRMYKLELKIVQDECMQLDLEDEAMKWHLR 446
Query: 1219 YGHLSYKGLNLLKKKNMVFGLPNIPDRDKTCEGCIFGKMHRLPFPKTS-YRAKAPLEIVH 1395
+GHL + GL L KK MVFGLP + K CE C+ GK R FP++S YRAK L ++H
Sbjct: 447 FGHLHFGGLTELVKKEMVFGLPKMEFEKKFCEECVIGKHARTSFPRSSEYRAKEQLGLIH 506
Query: 1396 ADICGP 1413
D+CGP
Sbjct: 507 TDLCGP 512
>gb|KYP58997.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 946
Score = 304 bits (779), Expect = 1e-90
Identities = 167/470 (35%), Positives = 256/470 (54%), Gaps = 1/470 (0%)
Frame = +1
Query: 1 SFMHQGVSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNEN 180
S +HQGV +I +I KT+KEAW ILK + G EK KLQ+L R+++ M ++E+
Sbjct: 61 SQIHQGVDYSIFGKIANAKTAKEAWNILKLSYKGVEKAQKSKLQSLRREYERYEMSNSES 120
Query: 181 VQEFFSRVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDEL 360
V+++FSRV+ +VN++R + + I + K+VEK+LR++P KF+H+V AI ES D +++ +L
Sbjct: 121 VEQYFSRVTDLVNKMRVYGEDIPESKVVEKILRTMPMKFDHVVTAIIESHDTDIMTVAKL 180
Query: 361 MGSLEAHEKRMSRFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXX 540
GS+E+H R+ + + E+A + + + + +R +S
Sbjct: 181 QGSIESHVSRILEKTEKGNEEALKSQVNFTNIAEPSRREDSKGREGGNINFRGR------ 234
Query: 541 XXXXXXXXXXXXXXXXXXDLYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDT 720
+ C C K H DCRFK + AN ++ H +
Sbjct: 235 -----GRGRGSFTNQERTNFNCYHCGKFGHRAADCRFK----QQANIAENQYKHTGESSD 285
Query: 721 NEANLSEEKEPNQVFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVKLG 900
N Q N+ IWY+D+GCSNH+CG K++F +LDE+ S VK G
Sbjct: 286 NP----------QTLLLVANNFSGDGAIWYLDTGCSNHLCGKKELFFSLDETVKSTVKFG 335
Query: 901 DGKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCII 1080
+ + I GKG +A++ ++G N I DVFY L NLLS+GQL +K Y ++ ++ +C +
Sbjct: 336 NNSNIPILGKGRVAIRLKDGSQNFISDVFYARGLHHNLLSMGQLSKKGYNMKIHHGYCTL 395
Query: 1081 IDKQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKK 1260
IDK +AK+KM+ N++FPL + + L S + LWH+R+GH + GLN L +
Sbjct: 396 IDKSGRF-IAKVKMTPNRLFPLKICHEKFTCLSSIIPNDDWLWHMRFGHFHFSGLNYLSR 454
Query: 1261 KNMVFGLPNIPDRDKTCEGCIFGKMHRLPFPK-TSYRAKAPLEIVHADIC 1407
K V GLP + + CE C GK HR FP S+RAK LEIVH+D+C
Sbjct: 455 KEYVSGLPIVNIPNGVCETCEIGKKHRESFPTGVSWRAKKLLEIVHSDLC 504
>gb|KYP65916.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 464
Score = 291 bits (746), Expect = 2e-90
Identities = 157/424 (37%), Positives = 248/424 (58%), Gaps = 7/424 (1%)
Frame = +1
Query: 163 MKDNENVQEFFSRVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLST 342
MK++E V++++S++ +VNQ+R + + I DKKIVEK++ S+P K++ I+ IE+ KDLST
Sbjct: 1 MKESETVKDYYSKIKEIVNQMRAYGENILDKKIVEKIIISVPRKYDPIMTTIEQIKDLST 60
Query: 343 LSLDELMGSLEAHEKRMSRFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXX 522
LS+ ELMGSLEA+E+R++R S+E AFQ K + ++N + +
Sbjct: 61 LSVTELMGSLEAYEQRLNRHDEDSIENAFQSKLKLRNKDNSRNFSRNYQNEYPP------ 114
Query: 523 YXXXXXXXXXXXXXXXXXXXXXXXDLYCRICRKNNHDTKDCRF----KCKRCRNANHSQR 690
C IC++ N KDCR+ +C+ C H ++
Sbjct: 115 ---------------------------CDICKRTNLAEKDCRYHGKPQCRHCNKVRHVKK 147
Query: 691 DCWHKDDGDTNEANLSEEKEPNQ-VFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNL 867
C +K+ ++AN +EEK Q +F++ +S + WY+DSGCSNHM + +F ++
Sbjct: 148 YCRNKNK---HQANFAEEKNGEQHLFYATQDSNSETSGNWYLDSGCSNHMAKDASIFKDI 204
Query: 868 DESYSSEVKLGDGKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDY 1047
DES +V++G+ + GKG + V+T++G M +I DV VP+L +NLLS+GQ++EK Y
Sbjct: 205 DESVKVKVRMGNDTVVESKGKGTVMVETKKG-MRLITDVILVPNLKENLLSIGQMMEKGY 263
Query: 1048 KVEFNNDHCIIIDKQKNLTMAKIKMSS-NKIFPLNLPLTEKIALQSTTEAEHNLWHLRYG 1224
+ F D C I D +K L + ++KM N+ FP++L A+++ + + LWH R+G
Sbjct: 264 TLHFEGDSCKIYDNKK-LEIGRVKMEKRNRSFPISLRQGLNFAMKAEVD-DSWLWHQRFG 321
Query: 1225 HLSYKGLNLLKKKNMVFGLPNIPDRDKTCEGCIFGKMHRLPFPK-TSYRAKAPLEIVHAD 1401
H + LNLL KKNM+ LP + + + CEGC GK HRLPF ++ AK LE++H +
Sbjct: 322 HFNTHALNLLYKKNMMRDLPCLKENSEACEGCFLGKQHRLPFSTGKAWSAKDLLELIHTN 381
Query: 1402 ICGP 1413
ICGP
Sbjct: 382 ICGP 385
>ref|XP_007030765.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
gi|508719370|gb|EOY11267.1| Uncharacterized protein
TCM_026511 [Theobroma cacao]
Length = 1318
Score = 276 bits (705), Expect = 1e-78
Identities = 161/478 (33%), Positives = 269/478 (56%), Gaps = 7/478 (1%)
Frame = +1
Query: 1 SFMHQGVSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNEN 180
S +H V+ AI RI +++KEAW+ +K++F G ++ I++ NL R+F+ L MKD E
Sbjct: 72 SCIHSAVTDAIFVRIMACESAKEAWDKIKEEFHGSDRTRQIQILNLLREFEVLKMKDEET 131
Query: 181 VQEFFSRVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDEL 360
++++ +V VVNQ+R + I ++++V K L SLP KFE ++++E+SKDL+T+S+ EL
Sbjct: 132 MKDYSDKVLRVVNQLRLFGENITERRVVNKFLVSLPEKFESKISSLEDSKDLTTMSVSEL 191
Query: 361 MGSLEAHEKRMSRFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXX 540
+ +L+A E+R ++L Q V+A+++ +KR +S
Sbjct: 192 INALQAQEQR------RALRQEDHVEAALAARR-VDKRTSSGSHKKSEYEKKDKDKRYEE 244
Query: 541 XXXXXXXXXXXXXXXXXXDLYCRICRKNNHDTKDCRF----KCKRCRNANHSQRDCWHKD 708
C C+K NH + C + KC+ C H ++ C +K+
Sbjct: 245 KKQGKKWQFPP----------CSYCKKKNHIERYCWYRPHVKCRACNQKGHVEKVCKNKE 294
Query: 709 DGDTNEANLSEEKEPNQ--VFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYS 882
+ +A + E+KE + +F ++ + ++IW +DS CS H+ G K F++L+++Y
Sbjct: 295 NRVEEKAAIVEQKEDAEETLFMVIESNDSKKDSIWLIDSACSTHITGKIKNFLDLNKAYK 354
Query: 883 SEVKLGDGKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFN 1062
S V++GDG KI G+G + + T++G M I +V + P++TQNLLSVGQL+++ + F
Sbjct: 355 STVEIGDGNLLKIAGRGTVGITTKKG-MKTIANVCFAPEVTQNLLSVGQLVKEKNSLLFK 413
Query: 1063 NDHCIIIDKQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKG 1242
++ C I D +A +KM NK FPL+L +A + + E LWH R GH++Y+
Sbjct: 414 DELCTIFD-PSGREIATVKM-RNKCFPLDLNEAGHMAYKCVSN-EARLWHRRLGHINYQF 470
Query: 1243 LNLLKKKNMVFGLPNIPDRDKTCEGCIFGKMHRLPFPKTSY-RAKAPLEIVHADICGP 1413
+ + N+V +P I + +KTCE C+ GK R PFPK S R L+++H DICGP
Sbjct: 471 IKNMGSLNLVNDMPIITEVEKTCEVCLQGKQSRHPFPKQSQTRTANRLQLIHTDICGP 528
>ref|XP_007014929.1| Uncharacterized protein TCM_040529 [Theobroma cacao]
gi|508785292|gb|EOY32548.1| Uncharacterized protein
TCM_040529 [Theobroma cacao]
Length = 1266
Score = 273 bits (698), Expect = 1e-77
Identities = 161/478 (33%), Positives = 268/478 (56%), Gaps = 7/478 (1%)
Frame = +1
Query: 1 SFMHQGVSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNEN 180
S +H V+ AI RI +++KEAW+ +K++F G ++ I++ NL R+F+ L MKD E
Sbjct: 72 SCIHSAVTDAIFVRIMACESAKEAWDKIKEEFHGSDRTRQIQILNLLREFEVLKMKDEET 131
Query: 181 VQEFFSRVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDEL 360
++++ +V VVNQ+R + I ++++V K L SLP KFE ++++E+SKDL+T+S+ EL
Sbjct: 132 MKDYSDKVLRVVNQLRLFGENITERRVVNKFLVSLPEKFESKISSLEDSKDLTTMSVSEL 191
Query: 361 MGSLEAHEKRMSRFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXX 540
+ L+A E+R ++L Q V+A+++ +KR +S
Sbjct: 192 INVLQAQEQR------RALRQEDHVEAALAARR-VDKRTSSGSHKKSEYEKKDKDKRYEE 244
Query: 541 XXXXXXXXXXXXXXXXXXDLYCRICRKNNHDTKDCRF----KCKRCRNANHSQRDCWHKD 708
C C+K NH + C + KC+ C H ++ C +K+
Sbjct: 245 KKQGKKGQFPP----------CSYCKKKNHIERYCWYRPHVKCRACNQKGHVEKVCKNKE 294
Query: 709 DGDTNEANLSEEKEPNQ--VFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYS 882
+ + + E+KE + +F ++ + ++IW +DS CS H+ G K F++L+++Y
Sbjct: 295 NRVEEKVAIVEQKEDAEETLFMVIESNDSKKDSIWLIDSACSTHITGKIKNFLDLNKAYK 354
Query: 883 SEVKLGDGKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFN 1062
S V++GDG KI G+G I + T++G + I +V + P++TQNLLSVGQL+++ + F
Sbjct: 355 STVEIGDGNLLKIEGRGTIGITTKKG-IKTIANVCFAPEVTQNLLSVGQLVKEKNSLLFK 413
Query: 1063 NDHCIIIDKQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKG 1242
++ C I D +A +KM NK FPL+L +A + + E LWH R GH++Y+
Sbjct: 414 DELCTIFD-PSGREIATVKM-RNKCFPLDLNEAGHMAYKCVSN-EARLWHRRLGHINYQF 470
Query: 1243 LNLLKKKNMVFGLPNIPDRDKTCEGCIFGKMHRLPFPKTSY-RAKAPLEIVHADICGP 1413
+ + N+V +P I + +KTCE C+ GK R PFPK S RA L+++H DICGP
Sbjct: 471 IKNMGSLNLVNDMPVITEVEKTCEVCLQGKQSRHPFPKQSQTRATNRLQLIHTDICGP 528
>gb|KYP45601.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 599
Score = 262 bits (669), Expect = 2e-77
Identities = 154/471 (32%), Positives = 250/471 (53%), Gaps = 5/471 (1%)
Frame = +1
Query: 16 GVSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNENVQEFF 195
GVS+AI RI +K++KE W+ LK+++ G E++ S+K+ NL R+F+ MK+ E ++E+
Sbjct: 52 GVSQAIFTRIKTLKSAKEIWDYLKEEYAGDERIRSMKVLNLMREFELQRMKEYEKIKEYS 111
Query: 196 SRVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDELMGSLE 375
++ + N+IR D IVEK+L ++ K+E A++E ++DLS ++ E++ + +
Sbjct: 112 DKLLGIANKIRLLGSNFPDSIIVEKILVTVSEKYEASTASLENTRDLSKITFAEVLHAFQ 171
Query: 376 AHEKRMSRFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXXXXXXX 555
A E+R ++E A VK+ ++ + A+S
Sbjct: 172 AQEQRSLMREDHAVEGALLVKSQQAKNYKKNYPASSYDKGKGGKKSYPP----------- 220
Query: 556 XXXXXXXXXXXXXDLYCRICRKNNHDTKDC----RFKCKRCRNANHSQRDCWHKDDGDTN 723
C+ C K H C KC +C H C K+
Sbjct: 221 ----------------CQHCGKMGHAPFRCWQRPDAKCNKCNQMGHEAIICKSKNQQQEE 264
Query: 724 EANLSEEKEPNQVFFS-CLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVKLG 900
EA +++KE +Q+F + C S + E+ W +DSGC+NHM NK +F +L + ++V++G
Sbjct: 265 EAKAADQKEEDQLFVATCFLSSESSES-WLIDSGCTNHMTFNKALFRDLRPTNVTKVRIG 323
Query: 901 DGKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCII 1080
+G + GKG IA+ + G I D+F VP++ QNLLSVGQL+EK +KV F + +C+I
Sbjct: 324 NGDHISVKGKGTIAITSCTGT-KFIHDIFLVPEIDQNLLSVGQLIEKGFKVVFEDKYCLI 382
Query: 1081 IDKQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKK 1260
D M K+KM K F LN PL E+ + S E +WH R GH ++GL + +
Sbjct: 383 KDAAGQ-DMFKVKMKG-KSFALN-PLEEEQVVFSLKENVTEIWHKRLGHYHHQGLLQMSE 439
Query: 1261 KNMVFGLPNIPDRDKTCEGCIFGKMHRLPFPKTSYRAKAPLEIVHADICGP 1413
K + +P + D+ C+ C FGK +R PF KT++RA L+++H D+ GP
Sbjct: 440 KGLALDIPVLEDQTSNCKACQFGKQNRKPFSKTAWRASRKLQLIHTDVAGP 490
>gb|KYP77007.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1228
Score = 271 bits (693), Expect = 4e-77
Identities = 148/430 (34%), Positives = 230/430 (53%), Gaps = 15/430 (3%)
Frame = +1
Query: 163 MKDNENVQEFFSRVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLST 342
M ++E+V+++FSRV+ +VN++R + + I + K+VEK+LR++P KF+H+V I ES D+
Sbjct: 1 MTNSESVEQYFSRVTDLVNKMRVYGEDIPESKVVEKILRTMPMKFDHVVTTIIESHDIEI 60
Query: 343 LSLDELMGSLEAHEKRMSRFSSQSLEQAFQVKASISE----EENQEKRANSXXXXXXXXX 510
+++ EL GS+E+H R+ + + E+A + + + + N++ R
Sbjct: 61 MTVAELQGSIESHVSRILEKTEKINEEALKSQVNFTNIAEPSRNEDSRGREGGNINFKGR 120
Query: 511 XXXXYXXXXXXXXXXXXXXXXXXXXXXXDLYCRICRKNNH-------DTKDCRFKCKRCR 669
+ + N + + F C C
Sbjct: 121 GRGSFRGRGRCNFNQQWRDNNFRPPNQGRGGYNVRSTNRGRGRGSFTNQERTNFNCYHCG 180
Query: 670 NANHSQRDCWHKDDGDTNEANLSEEKEPN---QVFFSCLNSQQQIENIWYVDSGCSNHMC 840
H DC K + E + E + Q N+ E IWY+D+GCSNHMC
Sbjct: 181 KFGHRAADCRFKQQANIAENQYEQTGEISDNPQTLLLATNNFSGNEAIWYLDTGCSNHMC 240
Query: 841 GNKKMFVNLDESYSSEVKLGDGKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLS 1020
G K++F +LDE+ S VK G+ + I GKG++A++ ++G N I DVFY P L NLLS
Sbjct: 241 GKKELFSSLDETVKSTVKFGNNSNIPILGKGQVAIRLKDGTQNFISDVFYAPGLHHNLLS 300
Query: 1021 VGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEH 1200
+GQL EK Y ++ ++ +C++IDK + L +AK+KMS N++FPLN+ + L S + +
Sbjct: 301 LGQLSEKGYNIQIHDGYCMLIDKNRRL-IAKVKMSPNRLFPLNVQYDKIPCLSSIIQNDD 359
Query: 1201 NLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPDRDKTCEGCIFGKMHRLPFPK-TSYRAKA 1377
LWH+R+GH + GLN L +K V GLP I CE C GK HR FP S+RA+
Sbjct: 360 WLWHMRFGHYHFSGLNFLSRKEYVSGLPVINIPKGICETCEIGKKHRESFPTGKSWRARK 419
Query: 1378 PLEIVHADIC 1407
PLEIVH+D+C
Sbjct: 420 PLEIVHSDLC 429
>gb|AAT38797.2| Polyprotein, putative [Solanum demissum]
Length = 1793
Score = 268 bits (684), Expect = 2e-75
Identities = 150/479 (31%), Positives = 259/479 (54%), Gaps = 8/479 (1%)
Frame = +1
Query: 1 SFMHQGVSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNEN 180
S M V+ ++ RI KT+KEAW+ LK+++ G ++ +++ NL R+F+ L+M+D+E
Sbjct: 184 SLMQNAVADSVFYRIMACKTAKEAWDRLKEEYQGSDRTRQMQVLNLKREFECLNMQDDET 243
Query: 181 VQEFFSRVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDEL 360
+ ++ R+S +VN IR + DK+IVEKVL +LP +FE +++ E+SKDL LSL EL
Sbjct: 244 ISKYADRISLIVNNIRLLGEEFTDKRIVEKVLVTLPERFESKISSFEKSKDLGKLSLGEL 303
Query: 361 MGSLEAHEKRMSRFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXX 540
MG+L+A E+R + + E A V+ I + Q+ N+
Sbjct: 304 MGALQAQEQRRNMRRDKFTEGAVSVQKQIFGKGKQQVNQNNKVKHDGGNNSGDVKKKFPP 363
Query: 541 XXXXXXXXXXXXXXXXXXDLYCRICRKNNHDTKDCRFK----CKRCRNANHSQRDCWHKD 708
C+ C++ H K C ++ C C+ H + C +
Sbjct: 364 ---------------------CKYCKRTTHLEKYCWWRVDAICGNCKQTGHISKVCKSRA 402
Query: 709 DGDTN-EANLSE--EKEPNQVFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESY 879
+ + +A +++ + +Q+F S + + W +DSGC++H+C + +MF LD++Y
Sbjct: 403 NASGSLQAQVADAADAHEDQLFAVSYFSINESSDSWILDSGCTHHLCNDAEMFKFLDDTY 462
Query: 880 SSEVKLGDGKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEF 1059
S+VK+G+G++ ++ G+G +++ G + I D+ Y PD++QNLLSVGQ+LE +Y + F
Sbjct: 463 KSKVKVGNGEAVEVKGRGTMSISIISG-IKTIPDILYTPDMSQNLLSVGQMLENNYSLHF 521
Query: 1060 NNDHCIIIDKQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYK 1239
N C++ D + + +KM SN +F ++ + A T + NLWH R+GH + +
Sbjct: 522 KNHECVVSD-PSGVELFYVKM-SNIMFSVDWEKITEQAYTITLQTCTNLWHKRFGHFNLR 579
Query: 1240 GLNLLKKKNMVFGLPNIPDRDKTCEGCIFGKMHRLPFPKTS-YRAKAPLEIVHADICGP 1413
+ +KKK +V +P + CE C GK +LPF +RA L+++H D+CGP
Sbjct: 580 SIAEMKKKELVENMPEFLSNAQVCETCQQGKQTKLPFQANQVWRANQKLQLIHTDVCGP 638
>ref|XP_015940984.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Arachis
duranensis]
Length = 3020
Score = 261 bits (667), Expect = 3e-73
Identities = 150/478 (31%), Positives = 256/478 (53%), Gaps = 7/478 (1%)
Frame = +1
Query: 1 SFMHQGVSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNEN 180
S ++ V+ I RI ++++K+ W+ LKK++ G +K+ +K NL R+ + + MK+NE+
Sbjct: 511 SSLYAAVTPIIFNRIMSLESAKDIWDFLKKEYEGNKKIKGMKAMNLKRELERVQMKENES 570
Query: 181 VQEFFSRVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDEL 360
VQEF +++ + N++ + ++++VEK+L S+P +FE +A++E ++++S + E
Sbjct: 571 VQEFANKLLDLTNKLALLGTDLGEERLVEKLLCSVPERFEATIASLENTREISEMPFAEA 630
Query: 361 MGSLEAHE-KRMSRFSSQSLEQAFQ--VKASISEEENQEKRANSXXXXXXXXXXXXXYXX 531
+ +L+A E +R+ R + +E A Q VK E++ Q K+ +
Sbjct: 631 VSALQAQEQRRVLRRGDEPVEGAMQARVKHGSGEKKKQGKQFGAQQTSFSSSDAQVR--- 687
Query: 532 XXXXXXXXXXXXXXXXXXXXXDLYCRICRKNNHDTKDC----RFKCKRCRNANHSQRDCW 699
D C+ C K H C C++C H +R C
Sbjct: 688 ------------------KGSDEACKHCGKKGHPFFRCWRRPNVVCRKCGKMGHIERICK 729
Query: 700 HKDDGDTNEANLSEEKEPNQVFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESY 879
K + E E Q+F + Q + W VDSGCSNHM GN+ +F N+D S
Sbjct: 730 EKSSQQGEAQAAAGEVE--QLFAASGFVSQVSRDGWLVDSGCSNHMSGNEAIFTNIDRSV 787
Query: 880 SSEVKLGDGKSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEF 1059
++ V++G+G ++ G+G + ++ G + ++ DV+YVP + QNLLSVGQL+EK K+ F
Sbjct: 788 NTRVRIGNGDHLEVEGRGNVLLEG-PGGVKLMSDVYYVPKIDQNLLSVGQLVEKGMKIVF 846
Query: 1060 NNDHCIIIDKQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYK 1239
+ + C I D++ L + +I M NK F + P +++ + + + LWH R GH YK
Sbjct: 847 DKNECAIADEEGKL-LFRIPMQ-NKTFAFD-PASKESKAMACVQGQEELWHRRLGHFHYK 903
Query: 1240 GLNLLKKKNMVFGLPNIPDRDKTCEGCIFGKMHRLPFPKTSYRAKAPLEIVHADICGP 1413
GL +++ +V LP + CE C+ GK+ R PF KT +RAK L++VH+D+CGP
Sbjct: 904 GLQFMQRHGLVEDLPQLGSEVSDCEVCLQGKLVRKPFQKTRWRAKKKLQLVHSDVCGP 961
>emb|CAN83567.1| hypothetical protein VITISV_030380 [Vitis vinifera]
Length = 567
Score = 248 bits (633), Expect = 1e-72
Identities = 149/469 (31%), Positives = 253/469 (53%), Gaps = 5/469 (1%)
Frame = +1
Query: 19 VSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNENVQEFFS 198
VS +I +I + ++ E WE LK+++ G E++ ++++ NL R+F+ M++++ V+++ +
Sbjct: 53 VSPSIFIKIMKIDSAAEIWEYLKEEYKGXERIKNMQVMNLIREFEMKKMRESDAVKDYAA 112
Query: 199 RVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDELMGSLEA 378
++ ++ +++R ++KIV+K+L +LP K+E ++++E SKDLST+SL EL+ SLEA
Sbjct: 113 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTISLTELLHSLEA 172
Query: 379 HEKRMSRFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXXXXXXXX 558
E+R + E AFQ + + EK N+
Sbjct: 173 VEQRRLMRQGDTAEGAFQARMQKNAGHKNEKMNNNKPCSNNQKNGVFPP----------- 221
Query: 559 XXXXXXXXXXXXDLYCRICRKNNHDTKDCRF----KCKRCRNANHSQRDCWHKDDGDTNE 726
C C+K NH + C + KC +C H +R C ++ +T+
Sbjct: 222 ---------------CPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSA 266
Query: 727 ANLSEEKEPNQVFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVKLGDG 906
A + + Q+F + + + W VDSGC+NHM N+ +F LD + S+V++G+G
Sbjct: 267 A--VDYCQEEQLFAATCFANKSTSKSWLVDSGCTNHMTNNQDLFRELDRTTISKVRIGNG 324
Query: 907 KSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIID 1086
+ + GKG +A++++ G + +I DV +VPD+ QNLLSVGQL+EK++KV F + +CII D
Sbjct: 325 EYIPVKGKGTVAIESQTG-LKLIYDVLFVPDIDQNLLSVGQLVEKEFKVYFEDRNCIIKD 383
Query: 1087 KQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKN 1266
+ + IKM K F LNL E A+ ++ W R H + + +KK
Sbjct: 384 AE-GKEVFNIKM-KGKSFALNLLEDEHTAILQ-QDSTTMFWDRRVEHFHHDDVLYMKKNQ 440
Query: 1267 MVFGLPNIPDRDKTCEGCIFGKMHRLPFP-KTSYRAKAPLEIVHADICG 1410
+V GLP++ C C +GK +LPFP K S+RA L++VH D+ G
Sbjct: 441 IVEGLPDLEKDLPICATCQYGKQTKLPFPKKISWRATQKLQLVHTDVGG 489
>emb|CAN69620.1| hypothetical protein VITISV_008603 [Vitis vinifera]
gi|147841281|emb|CAN62417.1| hypothetical protein
VITISV_038422 [Vitis vinifera]
Length = 570
Score = 246 bits (628), Expect = 8e-72
Identities = 148/469 (31%), Positives = 252/469 (53%), Gaps = 5/469 (1%)
Frame = +1
Query: 19 VSKAILPRITGVKTSKEAWEILKKQFGGYEKVISIKLQNLWRDFDNLSMKDNENVQEFFS 198
VS +I +I + ++ E WE LK+++ G E++ ++++ NL R+F+ M++++ V+++ +
Sbjct: 77 VSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAA 136
Query: 199 RVSTVVNQIRGHSDTIEDKKIVEKVLRSLPAKFEHIVAAIEESKDLSTLSLDELMGSLEA 378
++ ++ +++R ++KIV+K+L +LP K+E ++++E SKDLST+SL EL+ SLEA
Sbjct: 137 QLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLENSKDLSTISLTELLHSLEA 196
Query: 379 HEKRMSRFSSQSLEQAFQVKASISEEENQEKRANSXXXXXXXXXXXXXYXXXXXXXXXXX 558
E+R + E AFQ + + EK N+
Sbjct: 197 VEQRRLMRQGDTAEGAFQARMQKNAGHKNEKMNNNKPCSNNQKNGVFPP----------- 245
Query: 559 XXXXXXXXXXXXDLYCRICRKNNHDTKDCRF----KCKRCRNANHSQRDCWHKDDGDTNE 726
C C+K NH + C + KC +C H +R C ++ +T+
Sbjct: 246 ---------------CPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSA 290
Query: 727 ANLSEEKEPNQVFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVKLGDG 906
A + + Q+F + + + W VDSGC+NHM N+ +F LD + S+V++G+G
Sbjct: 291 A--VDYCQEEQLFAATCFANKSTSESWLVDSGCTNHMTNNQDLFRELDRTIISKVRIGNG 348
Query: 907 KSRKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIID 1086
+ + GKG +A++++ G + +I DV +VPD+ QNLLSVGQL+EK++KV F + +CII D
Sbjct: 349 EYIPVKGKGTVAIESQTG-LKLIYDVLFVPDIDQNLLSVGQLVEKEFKVYFEDRNCIIKD 407
Query: 1087 KQKNLTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKN 1266
+ + IKM K F LNL E A+ ++ W R H + + +KK
Sbjct: 408 AE-GKEVFNIKM-KGKSFALNLLEDEHTAILQ-QDSTTMFWDRRVEHFHHDDVLYMKKNQ 464
Query: 1267 MVFGLPNIPDRDKTCEGCIFGKMHRLPFP-KTSYRAKAPLEIVHADICG 1410
+ GLP++ C C +GK +LPFP K S+RA L++VH D+ G
Sbjct: 465 IAEGLPDLEKDLPICATCQYGKQTKLPFPKKISWRATQKLQLVHTDVGG 513