BLASTX nr result
ID: Rehmannia27_contig00022244
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00022244
(4687 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 1204 0.0
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera] 1185 0.0
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 1163 0.0
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 1146 0.0
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 1140 0.0
gb|KYP61781.1| Retrovirus-related Pol polyprotein from transposo... 1136 0.0
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 1130 0.0
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 1076 0.0
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo... 1036 0.0
gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposo... 1024 0.0
ref|XP_015084421.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r... 1014 0.0
gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposo... 1002 0.0
gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposo... 999 0.0
gb|KYP77073.1| Retrovirus-related Pol polyprotein from transposo... 994 0.0
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 992 0.0
gb|ABH07899.1| putative polyprotein [Solanum lycopersicum] 991 0.0
gb|KYP42321.1| Copia protein [Cajanus cajan] 982 0.0
gb|KYP63761.1| Retrovirus-related Pol polyprotein from transposo... 975 0.0
gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposo... 969 0.0
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf... 969 0.0
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 1204 bits (3115), Expect = 0.0
Identities = 651/1487 (43%), Positives = 909/1487 (61%), Gaps = 40/1487 (2%)
Frame = +3
Query: 291 TTMSKSDETKAEVFPVQSSGIDVMSPYYIHASDNPGQVYVSELLHDGNYRDWANDMSNAL 470
TTM+ S + ++ ID P YIH SD PG V V L+ NY+ W+ + +AL
Sbjct: 281 TTMAGSQKASGS----ENKTIDPSHPLYIHHSDQPGHVLVPIKLNGVNYQSWSKAVIHAL 336
Query: 471 FAKNKIGFVDGTIPMPKPDSPELIY--WMRCNAMVKGWLNSAMNKEIRSSVKYAKTAREI 644
K KIGFVDGT+ P + ++ W +CN+M+ WL A+ +I + +AKTARE+
Sbjct: 337 TTKKKIGFVDGTVEEPSQEDEPFMFEQWNQCNSMILSWLTHAVESDIAEGIIHAKTAREV 396
Query: 645 WIDLEERFGKESAPRAYELRQALTLLRQEKLSVSAYYTKLRGLWDEIQSVSPTPRCTCSG 824
W+DL ++F +++AP +++++++ + Q ++V+AY+TK++ LWDE+++ S
Sbjct: 397 WVDLRDQFSQKNAPAVFQIQKSIATMSQGTMTVAAYFTKIKALWDELETYR-------SP 449
Query: 825 CTCDIQKQLTVMREKEQLYEFLMGLDDSFATVKIQILSTKPILSLGAAYHLVAEDEQQRL 1004
TC+ ++ RE+++L +FLMGL++S+ V+ IL P+ ++ AY L+ ++E QR
Sbjct: 450 LTCNQRQAHLEQREEDRLMQFLMGLNESYKAVRSNILMMSPLPNVRQAYSLIVQEEMQRQ 509
Query: 1005 IAAARKPSVQAAAFQIQSKRDDREATDRRYGRKEKLRCNHCQKPNHTEDQCFEII----- 1169
+++ + AA A + G + C+HC + HT D+C +
Sbjct: 510 VSSEPTENFSIAA-----------AVPGKGGNPRQKMCDHCNRSGHTIDECRTLKFHCKF 558
Query: 1170 ----GYPPGWRKNVRKGSQ-QNDQRSGPKVAHVGVETSPILGLSQDQYARLVQFLNPDNE 1334
G+ R ++ GS + Q G + G + S SQ+ ++
Sbjct: 559 CDKRGHTED-RCRLKNGSNNKTGQFRGQRPFGRGNQPSANATESQE--------MSDSTS 609
Query: 1335 NSKVAGSTTNPTANMAGKI---NFDKPWVIDS-----GATEHITCD-ERFLEIGTETGTS 1487
+S V G TT +A I N ID+ GAT+HI F ++ T+
Sbjct: 610 SSTVQGFTTEQIQQLAQAIRALNHSNSGNIDAYANAAGATDHIVSHMSLFTDLKPSNVTT 669
Query: 1488 LPVKIPNGDTIPVKNVGNARLPNGLKIHRVLNIPTFQCNLLSVSRLTNDFNCALIFFPDF 1667
V +PNG P+ + G + L + VL +P+F NL+S S+L D NC +IFFPD+
Sbjct: 670 --VNLPNGVASPITHTGTVIFDSQLTLKDVLCVPSFNLNLISASKLAKDQNCYIIFFPDY 727
Query: 1668 CVMQDLPSRNLIGVGRQFDGLYCLEPVKNEGMAMSVTVDPEIWHRRLGHASGAKLQKLPI 1847
C++QDL S +IG G+Q GLY + P N+ + V+ ++WH RLGH S ++ + L
Sbjct: 728 CILQDLVSGKMIGSGKQRGGLYYMHPSTNKSVVFHVSQPSDLWHLRLGHPSFSRFKLLSR 787
Query: 1848 LAKSNN---GNNIICDSCVRAKQTRLPFPSSSIKTNSCFELIHCDIWGSYKTASFSGAHY 2018
L + GN+ C C +AKQTRLPFP SSI T F L+HCD+WG +K + +G+ Y
Sbjct: 788 LLPDIHKEIGNH--CPICPQAKQTRLPFPKSSITTKFPFSLLHCDVWGPHKIPAHTGSRY 845
Query: 2019 FLSIVDDYSRGVWIFLMKQKSEVGHILTMFCNMVKTQFDKKVKRIRSDNGAEFQSTYMLD 2198
FL+IVDD+SR WIFLM KSE +LT F VKTQF V+ +R DNG EF +
Sbjct: 846 FLTIVDDFSRCTWIFLMHHKSETQSLLTNFVQFVKTQFHTDVQTVRMDNGTEFIPLRI-- 903
Query: 2199 YYKEHGIVLETSCTYTPQQNGVVERKHRHILEVARALRFQENLPIEFWGECVLTAVYIIN 2378
+ + GI L+TSC YTPQQNGVVERKHRHIL VAR+L FQ N+P+EFWGECVLTAVY+IN
Sbjct: 904 FLQNKGIELQTSCIYTPQQNGVVERKHRHILNVARSLMFQSNVPLEFWGECVLTAVYLIN 963
Query: 2379 RLPSRAINDKTQHEILLGKEPVYDHMRVFGCLAYAHDNKRKDKFDERGRPCIFVGYPNGQ 2558
R+P+ +++K+ E+L + P H+RVFGC Y + K KFD R C+F+GYP+G+
Sbjct: 964 RIPTPLLSNKSPFEVLYNRPPSLTHLRVFGCECYVTNVHPKQKFDPRASICVFLGYPHGK 1023
Query: 2559 KGYRVYDLKNREIYTSRDVTFVEHSYPFKEKNSELGHKIN------PINGDDAWESATVE 2720
KGY+V DL+ ++I SRDV F E+ +PF +S+ PI+ D + ++
Sbjct: 1024 KGYKVLDLQTQKISVSRDVFFRENIFPFHSSSSQSQQHSPSLPLPLPISFDSTPQPISLP 1083
Query: 2721 ----------AQHEYITGGDSINIDLVENDSQEGTQQELTTMGHEQDDSGPIQELTIAPE 2870
+ H ++ S N D+ E S E L + S P + + P
Sbjct: 1084 RFSPSSTPPLSHHNPVSSPPSSNTDVPEPLSHESVASPLPSSPSPSSLSSP-PSVPLVPS 1142
Query: 2871 NEIAHEHHTTPEMKNEIEVRRGQRTRRQPKHLENFVTDMPPSVDHSQPTPTSGTSTVYPL 3050
N A P +E +RR R + P ++V M ++HS +S T YPL
Sbjct: 1143 NTSA------PSPTHEPPLRRSTRHIQPPAWHHDYV--MSAQLNHSSTQSSSRQGTRYPL 1194
Query: 3051 SQFVSYNKFSEAHKAFLAAITSRDEPKYFHQAIKDPNWCDAMKKEVDALEANGTWKLVHF 3230
S +S+ +FS H+AFLA +T++ EP F QA DP W AM E+ ALE N TW++V
Sbjct: 1195 SSHLSFFRFSPHHRAFLALLTAQTEPSSFEQADCDPRWRQAMSTELQALERNNTWEMVPL 1254
Query: 3231 PQGKRAIDSKWVYKIKYKPNGEIERYKARLVAKGFTQMEGIDFHETFAPVAKLVTVRCLL 3410
P G + I +WVYKIKY +G IERYKARLVAKG+TQ+ GID+ ETF+P AKL T+RCLL
Sbjct: 1255 PPGHKPIGCRWVYKIKYHSDGTIERYKARLVAKGYTQVAGIDYQETFSPTAKLTTLRCLL 1314
Query: 3411 TVAAKRGWEVHQLDVNNAFLHGDLAEEVYMKIPQGFAKKGEMRVCKLQKSLYGLKQASRN 3590
TVAA R W +HQLDV+NAFLHG+L EEVYM P G ++GE VC+L+KS+YGLKQASRN
Sbjct: 1315 TVAASRNWYIHQLDVHNAFLHGNLQEEVYMTPPPGLRRQGENLVCRLRKSIYGLKQASRN 1374
Query: 3591 WYQKFTRALLDIGFRQSHADHSLFIFKSDNIHIAALIYVDDVLLAGNDRERIVNIKSYLD 3770
W+ FT + G+ QS AD+SLF N A LIYVDD+LL GND I +K++L
Sbjct: 1375 WFSTFTATVKSAGYIQSKADYSLFTKSQGNKFTAILIYVDDILLTGNDLHEIKMLKTHLL 1434
Query: 3771 AKFSINDLGPLKYFLGIEVARSSEGFVLSQRKYTLDILEECGLQASRPSAIPMEQNIKLH 3950
+F I DLG LKYFLGIE +RS +G +SQRKYTLDIL++ GL +P PMEQN+KL
Sbjct: 1435 KRFFIKDLGELKYFLGIEFSRSKKGIFMSQRKYTLDILQDTGLTGVKPEKFPMEQNLKLT 1494
Query: 3951 FEDNSPIIDAAQYRRLVGRLLYLTVTRPDITFSVNLLSQFISCPRQTHMNAAVRVLRYLK 4130
ED + D ++YRRLVGRL+YLTVTRPDI +SV LSQF++ PR+ H AA+RVLRY+K
Sbjct: 1495 NEDGELLHDPSRYRRLVGRLIYLTVTRPDIVYSVRTLSQFMNTPRKPHWEAALRVLRYIK 1554
Query: 4131 MTPGQGLFLLADGGLSLEAYCDADWGGCQFTRRSSTGYFISLGGAPVSWRTKKQSVVARS 4310
+PGQGLFL ++ L+L A+CD+DWGGC+ +RRS +GY + LG + +SW++KKQ+ V+RS
Sbjct: 1555 GSPGQGLFLPSENNLTLSAFCDSDWGGCRMSRRSVSGYCVFLGSSLISWKSKKQTNVSRS 1614
Query: 4311 SAEAEYRAMAATVSELLWLRWMLKDLGAHQHGPTPMFCDNQAARHIAVNPVFHERTKHVE 4490
SAEAEYRAMA T EL WLR++LKDL P P+FCDNQAA +IA NPVFHERTKH+E
Sbjct: 1615 SAEAEYRAMANTCLELTWLRYILKDLKVELDKPAPLFCDNQAALYIAANPVFHERTKHIE 1674
Query: 4491 MDCYFVRERVERGDIEPRKISTNLQIADILTKALGTVRFRFLRSKLG 4631
+DC+ VRE+++ G I P +ST +Q+AD+ TKALG +F FL +KLG
Sbjct: 1675 IDCHIVREKLQAGVIRPCYVSTKMQLADVFTKALGREQFEFLCTKLG 1721
>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
Length = 1498
Score = 1185 bits (3065), Expect = 0.0
Identities = 662/1544 (42%), Positives = 910/1544 (58%), Gaps = 98/1544 (6%)
Frame = +3
Query: 318 KAEVFPVQSSGIDVMSPYYIHASDNPGQVYVSELLHDGNYRDWANDMSNALFAKNKIGFV 497
K+E+ P S D+ +PY+ H SD+PG V +S+ L+ NY W M AL +KNK+GFV
Sbjct: 3 KSEI-PTNFSKADLSNPYFTHHSDHPGLVLISKSLNGDNYSAWKRAMILALNSKNKLGFV 61
Query: 498 DGTIPMPKPD-SPE-LIYWMRCNAMVKGWLNSAMNKEIRSSVKYAKTAREIWIDLEERFG 671
+G+I P + PE W RCN MV W+ + +N EI +SV Y TA E+W DL ERF
Sbjct: 62 NGSIKAPSEEIDPEGYATWSRCNDMVHSWIVNTLNPEIANSVIYYSTAHEVWEDLCERFS 121
Query: 672 KESAPRAYELRQALTLLRQEKLSVSAYYTKLRGLWDEIQSVSPTPRCTCSGCTCDIQKQL 851
+ +APR +E+++ + LRQE+LSVSAYYTKL+GLWDE+ S +
Sbjct: 122 QSNAPRIFEIQRDIACLRQEQLSVSAYYTKLKGLWDELASYNAAAH-------------- 167
Query: 852 TVMREKEQLYEFLMGLDDSFATVKIQILSTKPILSLGAAYHLVAEDEQQRLIAA--ARKP 1025
+++++L +FLMGL++S++ ++ QIL P+ S+ AY ++++E+QRL+ + A
Sbjct: 168 GAQQDQQKLMQFLMGLNESYSVIRGQILLMNPLPSVRQAYSTISQEEKQRLLTSTNAAAE 227
Query: 1026 SVQAAAFQIQSKRD---------DR------EATDRRYGRKEKL---------------- 1112
S +AA ++S DR E T+R G + L
Sbjct: 228 SAASAAMAVRSNGKSLTTWKDGIDRSNTRRMEPTNRPSGSQNFLENRSSQGQDGRPFFDQ 287
Query: 1113 ------------RCNHCQKPNHTEDQCFEIIGYPPGW---RKNVRKGSQQNDQRSGPKVA 1247
+C++C H +CF++ GYPP R N+ S +N S
Sbjct: 288 DRRRIGSGRGRPQCSYCGDMGHWVQKCFQLHGYPPDHPKARMNLGSNSNRNKSFSATNQV 347
Query: 1248 HVGVETSPILGLSQDQYARLVQFLNPDNENSKV-AGSTTNPTANMAGKINFDKPWVIDSG 1424
E P + LS+ Q +L+ LN +ENS + T P + N W+IDSG
Sbjct: 348 SEADEGKPAVALSEAQLKQLLSLLNNQDENSSSKVNAVTKPGLSKVASRN----WIIDSG 403
Query: 1425 ATEHITCDERFLEIGTETGTSLP-VKIPNGDTIPVKNVGNARLPNGLKIHRVLNIPTFQC 1601
AT+HIT + L + SLP V +P+G+ + G L + +H VL++PTF+
Sbjct: 404 ATDHITSSSKLLH--KDKNCSLPLVLLPSGEKANIVTKGTLPLNSVYYLHDVLSVPTFKV 461
Query: 1602 NLLSVSRLTNDFNCALIFFPDFCVMQDLPSRNLIGVGRQFDGLYCLEPVKNE-------- 1757
+L+SVSRLT NC++ FFP +C++QDL +R IG+G+Q D LY L + E
Sbjct: 462 DLISVSRLTKGLNCSVTFFPYWCILQDLATRRTIGLGKQRDRLYYLVALATEKSLTNHSS 521
Query: 1758 -------GMAMSVTVDPEIWHRRLGHASGAKLQKLPILAKSNNGNNIICDSCVRAKQTRL 1916
+A+S T ++WH RLGH++ A C C AKQ+RL
Sbjct: 522 STNQPACNLAISST---DLWHSRLGHSNNA------------------CPICPLAKQSRL 560
Query: 1917 PFPSSSIKTNSCFELIHCDIWGSYKTASFSGAHYFLSIVDDYSRGVWIFLMKQKSEVGHI 2096
PF +S+I + FE+IHCDIWG Y+ S GAHYFL+IVDDY+R WIFLM+ K E +
Sbjct: 561 PFGTSAISSTKPFEIIHCDIWGRYRHPSLFGAHYFLTIVDDYTRFTWIFLMRHKDEAQSL 620
Query: 2097 LTMFCNMVKTQFDKKVKRIRSDNGAEFQSTYMLDYYKEHGIVLETSCTYTPQQNGVVERK 2276
L F + V TQF+ ++K RSDN EF S + +++++G++ + SC YTPQQNGVVERK
Sbjct: 621 LKRFFSYVFTQFEFRIKTFRSDNXXEFTS--LRSFFQDNGVIFQHSCVYTPQQNGVVERK 678
Query: 2277 HRHILEVARALRFQENLPIEFWGECVLTAVYIINRLPSRAINDKTQHEILLGKEPVYDHM 2456
HRHIL+VARAL+F +P +FWGEC LTAV+IINRL S ++ KT E+L K P Y H+
Sbjct: 679 HRHILQVARALKFHAQVPTQFWGECALTAVHIINRLXSPILSFKTPFELLYLKSPXYSHL 738
Query: 2457 RVFGCLAYAHDNKRKDKFDERGRPCIFVGYPNGQKGYRVYDLKNREIYTSRDVTFVEHSY 2636
RVFGCLAYA + KFD R P IF+GYP GQK Y+++DL ++++TSRDV F E +
Sbjct: 739 RVFGCLAYATNVHTSHKFDYRAMPSIFIGYPVGQKAYKLFDLSTKKVFTSRDVKFHEDIF 798
Query: 2637 PFKEKNSE-----LGHKINPIN--GDDAWES--ATVEAQHEYITGGDSINIDLVEND--S 2783
P+ L H PI D S +T A ++ S END S
Sbjct: 799 PYVSLKPNXTLPSLTHNSGPIPLVAHDISSSFDSTSHALSPLLSNHTSTXSPXTENDDFS 858
Query: 2784 QEGTQQELTTMGHEQDDSGP----------------IQELTIAPENEIAHEHHTTPEMKN 2915
EL Q D P + AP E T K
Sbjct: 859 SPSRPSELIIEPSSQIDPNPSPSPSTTLVSPSSGPPFASIPSAPPTETPIFSPETHSPKP 918
Query: 2916 EIEVRRGQRTRRQPKHLENFVTDMPPSVDHSQ--PTPTSGTSTVYPLSQFVSYNKFSEAH 3089
+RR R P L ++V S S P PT GT YPL+ +VSY+++ A+
Sbjct: 919 ATPLRRSSRHIAPPIKLHDYVCSHVSSNQSSSLIPGPTKGTR--YPLANYVSYHRYKPAY 976
Query: 3090 KAFLAAITSRDEPKYFHQAIKDPNWCDAMKKEVDALEANGTWKLVHFPQGKRAIDSKWVY 3269
++F+A ++ EP+ + +A P W AM+ E+ AL+ANGTW L P GK I +WVY
Sbjct: 977 RSFVAQHSAVTEPRSYSEAAAHPEWQKAMRSELQALQANGTWSLTPLPAGKTPIGYRWVY 1036
Query: 3270 KIKYKPNGEIERYKARLVAKGFTQMEGIDFHETFAPVAKLVTVRCLLTVAAKRGWEVHQL 3449
KIK++ +G IERYKARLVAKGFTQ+EG+D+ +TF+P AK+++VRCLL +AA RG +HQ+
Sbjct: 1037 KIKHRSDGSIERYKARLVAKGFTQLEGVDYQDTFSPTAKIISVRCLLALAAARGXSIHQM 1096
Query: 3450 DVNNAFLHGDLAEEVYMKIPQGFAKKGEMR-VCKLQKSLYGLKQASRNWYQKFTRALLDI 3626
DVNNAFLHGDL EE+YM P G ++GE VC+L KSLYGLKQASR W+ KF+ A+
Sbjct: 1097 DVNNAFLHGDLHEEIYMSPPLGLRRQGEENLVCRLHKSLYGLKQASRQWFAKFSEAIQSA 1156
Query: 3627 GFRQSHADHSLFIFKSDNIHIAALIYVDDVLLAGNDRERIVNIKSYLDAKFSINDLGPLK 3806
G+ QS AD+SLF K A LIYVDD+L+ GND I K +L + F + DLG LK
Sbjct: 1157 GYAQSRADYSLFTRKQGKSFTALLIYVDDILITGNDPVSIATTKKFLHSHFHLKDLGDLK 1216
Query: 3807 YFLGIEVARSSEGFVLSQRKYTLDILEECGLQASRPSAIPMEQNIKLHFEDNSPII-DAA 3983
YFLGIEV+ S G +SQRKY L+I+E+ GL + P PME+ +KL D S ++ D
Sbjct: 1217 YFLGIEVSASKNGIFISQRKYALEIIEDAGLLGAAPIDTPMERGLKL--SDKSDLLKDQG 1274
Query: 3984 QYRRLVGRLLYLTVTRPDITFSVNLLSQFISCPRQTHMNAAVRVLRYLKMTPGQGLFLLA 4163
+YRRLVGRL+YLTV+RPDIT++V++LS+F+ PR+ HM AA RV+RYLK PGQGLF +
Sbjct: 1275 RYRRLVGRLIYLTVSRPDITYAVHVLSRFMHQPRKAHMEAAFRVVRYLKNAPGQGLFFSS 1334
Query: 4164 DGGLSLEAYCDADWGGCQFTRRSSTGYFISLGGAPVSWRTKKQSVVARSSAEAEYRAMAA 4343
+ L YCD+DW GC TRRS+TGY + LG + +SWR+K+Q V+ SSAEAEYRAM
Sbjct: 1335 NNDFRLRXYCDSDWAGCPLTRRSTTGYCVFLGPSLISWRSKRQKTVSLSSAEAEYRAMTG 1394
Query: 4344 TVSELLWLRWMLKDLGAHQHGPTPMFCDNQAARHIAVNPVFHERTKHVEMDCYFVRERVE 4523
EL WLR++LKDLG P ++CDN+AA HIA NPVFHERT+H+EMDC+++R++++
Sbjct: 1395 ACCELTWLRYLLKDLGVLHKEPALLYCDNKAALHIAANPVFHERTRHIEMDCHYIRDKIQ 1454
Query: 4524 RGDIEPRKISTNLQIADILTKALGTVRFRFLRSKLGVRDLHLPT 4655
G I R +S+ Q+ADILTK LG F + KLGV+D+H PT
Sbjct: 1455 DGSIITRHVSSAHQLADILTKPLGKEFFAPMIRKLGVQDIHSPT 1498
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 1163 bits (3009), Expect = 0.0
Identities = 637/1489 (42%), Positives = 892/1489 (59%), Gaps = 56/1489 (3%)
Frame = +3
Query: 357 VMSPYYIHASDNPGQVYVSELLHDGNYRDWANDMSNALFAKNKIGFVDGTIPMPKPDSPE 536
++SPY + +SDNPG V S L+ NY WA +M NAL AK K GF++GTIP P P+ P
Sbjct: 28 MVSPYTLASSDNPGAVISSVELNGDNYNQWATEMLNALQAKRKTGFINGTIPRPPPNDPN 87
Query: 537 LIYWMRCNAMVKGWLNSAMNKEIRSSVKYAKTAREIWIDLEERFGKESAPRAYELRQALT 716
W N+M+ GW+ +++ +++++V + A +W DL++RF + R +++R L+
Sbjct: 88 YENWTAVNSMIVGWIRTSIEPKVKATVTFISDAHLLWKDLKQRFSVGNKVRIHQIRAQLS 147
Query: 717 LLRQEKLSVSAYYTKLRGLWDEIQSVSPTPRCTCSGCTCDIQKQLTVMREKEQLYEFLMG 896
RQ+ +V YY +L LW+E P CTC C C + T RE+E++++F++G
Sbjct: 148 SCRQDGQAVIEYYGRLSNLWEEYNIYKPVTVCTCGLCRCGATSEPTKEREEEKIHQFVLG 207
Query: 897 LDDS-FATVKIQILSTKPILSLGAAYHLVAEDEQQRLIAAARKPSVQAAAFQIQSKR-DD 1070
LD+S F + +++ P+ SLG Y V +EQ+ R+ +A F + ++ D
Sbjct: 208 LDESRFGGLCATLINMDPLPSLGEIYSRVIREEQRLASVHVREQKEEAVGFLARREQLDH 267
Query: 1071 REATDRRYGRKE-------------KLRCNHCQKPNHTEDQCFEIIGYPPGW-RKNVRKG 1208
D R E ++ C++C + H + +C++I+G+P W +N +G
Sbjct: 268 HSRVDASSSRSEHTGGSRSNSIIKGRVTCSNCGRTGHEKKECWQIVGFPDWWSERNGGRG 327
Query: 1209 SQ--------QNDQRSGPKV--AHVGVETSPILGLSQDQYARLVQFLNPDNENSKVAGST 1358
S N R +V AH S + +++ R++ L + NS GST
Sbjct: 328 SNGRGRGGRGSNGGRGQGQVMAAHATSSNSSVFPEFTEEHMRVLSQLVKEKSNS---GST 384
Query: 1359 TNPTAN-MAGKINFDKPWVIDSGATEHITCDERFLEIGTETGTSLPVKIPNGDTIPVKNV 1535
+N ++ ++GK ++DSGA+ H+T L PV +G +V
Sbjct: 385 SNNNSDRLSGKTKLGDI-ILDSGASHHMTGTLSSLT-NVVPVPPCPVGFADGSKAFALSV 442
Query: 1536 GNARLPNGLKIHRVLNIPTFQCNLLSVSRLTNDFNCALIFFPDFCVMQDLPSRNLIGVGR 1715
G L N + + VL +P+ C L+SVS+L C F C +QD S+ LIG G
Sbjct: 443 GVLTLSNTVSLTNVLFVPSLNCTLISVSKLLKQTQCLATFTDTLCFLQDRSSKTLIGSGE 502
Query: 1716 QFDGLYCLEPVKNEGM-AMSVTVDPEIWHRRLGHASGAKLQKLPILAK-SNNGNNIICDS 1889
+ G+Y L V + +V D +WH+RLGH S + L LP+ +K S+ + CD
Sbjct: 503 ERGGVYYLTDVTPAKIHTANVDSDQALWHQRLGHPSFSVLSSLPLFSKTSSTVTSHSCDV 562
Query: 1890 CVRAKQTRLPFPSSSIKTNSCFELIHCDIWGSYKTASFSGAHYFLSIVDDYSRGVWIFLM 2069
C RAKQTR FP S KT CF LIHCD+WG Y+ + GA YFL+IVDDYSR VW +L+
Sbjct: 563 CFRAKQTREVFPESINKTEECFSLIHCDVWGPYRVPASCGAVYFLTIVDDYSRAVWTYLL 622
Query: 2070 KQKSEVGHILTMFCNMVKTQFDKKVKRIRSDNGAEFQSTYMLDYYKEHGIVLETSCTYTP 2249
+KSEV +LT F + QF K VK +RSDNG EF + Y++E+GI+ +TSC TP
Sbjct: 623 LEKSEVRQVLTNFLKYAEKQFGKTVKMVRSDNGTEFMC--LSSYFRENGIIHQTSCVGTP 680
Query: 2250 QQNGVVERKHRHILEVARALRFQENLPIEFWGECVLTAVYIINRLPSRAINDKTQHEILL 2429
QQNG VERKHRHIL VARAL FQ +LPI+FWGE +LTA Y+INR PS ++ +T +E+L
Sbjct: 681 QQNGRVERKHRHILNVARALLFQASLPIKFWGESILTAAYLINRTPSSILSGRTPYEVLH 740
Query: 2430 GKEPVYDHMRVFGCLAYAHDNKR-KDKFDERGRPCIFVGYPNGQKGYRVYDLKNREIYTS 2606
G +PVY +RVFG Y H R KDKF +R R CIFVGYP G+KG++VYD++ E S
Sbjct: 741 GSKPVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKKGWKVYDIERNEFLVS 800
Query: 2607 RDVTFVEHSYPFKEKNSEL--GHKINPINGDDAWESATVEAQ--------HEYITGGDSI 2756
RDV F E +P+ NS + ++ DD W +E + + D +
Sbjct: 801 RDVIFREEVFPYAGVNSSTLASTSLPTVSEDDDWAIPPLEVRGSIDSVETERVVCTTDEV 860
Query: 2757 NIDLVENDSQEGTQQELTTMGHEQDDSGPIQELTIAPENEIAHEHHTTP---EMKNEIEV 2927
+D +DS+ Q+ + DD+ P L+++P + TTP + + I V
Sbjct: 861 VLDTSVSDSEIPNQEFVP------DDTPPSSPLSVSPSG--SPNTPTTPIVVPVASPIPV 912
Query: 2928 -----RRGQRTRRQPKHLENFV---TDMPPSVDHSQPTPTSGTSTV-----YPLSQFVSY 3068
R+ +R P L ++V PS H+ P S +STV +PL+ +VS
Sbjct: 913 SPPKQRKSKRATHPPPKLNDYVLYNAMYTPSSIHALPADPSQSSTVPGKSLFPLTDYVSD 972
Query: 3069 NKFSEAHKAFLAAITSRDEPKYFHQAIKDPNWCDAMKKEVDALEANGTWKLVHFPQGKRA 3248
FS +H+A+LAAIT EPK+F +A++ W DAM EVDALE N TW +V P GK A
Sbjct: 973 AAFSSSHRAYLAAITDNVEPKHFKEAVQIKVWNDAMFTEVDALEINKTWDIVDLPPGKVA 1032
Query: 3249 IDSKWVYKIKYKPNGEIERYKARLVAKGFTQMEGIDFHETFAPVAKLVTVRCLLTVAAKR 3428
I S+WV+K KY +G +ERYKARLV +G Q+EG D+ ETFAPV ++ TVR LL A
Sbjct: 1033 IGSQWVFKTKYNSDGTVERYKARLVVQGNKQVEGEDYKETFAPVVRMTTVRTLLRNVAAN 1092
Query: 3429 GWEVHQLDVNNAFLHGDLAEEVYMKIPQGFAKKGEMRVCKLQKSLYGLKQASRNWYQKFT 3608
WEV+Q+DV+NAFLHGDL EEVYMK+P GF +VC+L+KSLYGLKQA R W++K +
Sbjct: 1093 QWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLS 1152
Query: 3609 RALLDIGFRQSHADHSLFIFKSDNIHIAALIYVDDVLLAGNDRERIVNIKSYLDAKFSIN 3788
+LL GF QS+ D+SLF + +NI + LIYVDD+L+ GND + K YL FS+
Sbjct: 1153 DSLLRFGFVQSYEDYSLFSYTRNNIELRVLIYVDDLLICGNDGYMLQKFKDYLSRCFSMK 1212
Query: 3789 DLGPLKYFLGIEVARSSEGFVLSQRKYTLDILEECGLQASRPSAIPMEQNIKLHFEDNSP 3968
DLG LKYFLGIEV+R EG LSQRKY LD++ + G SRP+ P+EQN L +D
Sbjct: 1213 DLGKLKYFLGIEVSRGPEGIFLSQRKYALDVIADSGNLGSRPAHTPLEQNHHLASDDGPL 1272
Query: 3969 IIDAAQYRRLVGRLLYLTVTRPDITFSVNLLSQFISCPRQTHMNAAVRVLRYLKMTPGQG 4148
+ D YRRLVGRLLYL TRP++++SV++L+QF+ PR+ H +AA+RV+RYLK +PGQG
Sbjct: 1273 LSDPKPYRRLVGRLLYLLHTRPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQG 1332
Query: 4149 LFLLADGGLSLEAYCDADWGGCQFTRRSSTGYFISLGGAPVSWRTKKQSVVARSSAEAEY 4328
+ L AD L+LE YCD+DW C TRRS + Y + LGG+P+SW+TKKQ V+ SSAEAEY
Sbjct: 1333 ILLNADPDLTLEVYCDSDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTVSHSSAEAEY 1392
Query: 4329 RAMAATVSELLWLRWMLKDLGAHQHGPTPMFCDNQAARHIAVNPVFHERTKHVEMDCYFV 4508
RAM+ + E+ WLR +LK+LG Q P ++CD++AA HIA NPVFHERTKH+E DC+ V
Sbjct: 1393 RAMSYALKEIKWLRKLLKELGIEQSTPARLYCDSKAAIHIAANPVFHERTKHIESDCHSV 1452
Query: 4509 RERVERGDIEPRKISTNLQIADILTKALGTVRFRFLRSKLGVRDLHLPT 4655
R+ V G I + + T Q+AD+ TKALG +F +L SKLGV++LH PT
Sbjct: 1453 RDAVRDGIITTQHVRTTEQLADVFTKALGRNQFLYLMSKLGVQNLHTPT 1501
>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
Length = 1316
Score = 1146 bits (2964), Expect = 0.0
Identities = 620/1385 (44%), Positives = 847/1385 (61%), Gaps = 47/1385 (3%)
Frame = +3
Query: 642 IWIDLEERFGKESAPRAYELRQALTLLRQEKLSVSAYYTKLRGLWDEIQSVSPTPRCTCS 821
+W DL+ER+ +APR ++LR + L+QE ++V+AYY K++G+WDE+ P CTC
Sbjct: 1 MWEDLKERYAVGNAPRVHQLRSEIVNLKQEGMTVAAYYAKIKGMWDELNQYIEIPECTCG 60
Query: 822 GCTCDIQKQLTVMREKEQLYEFLMGLDDS-FATVKIQILSTKPILSLGAAYHLVAEDEQQ 998
++ RE E+ ++FLMGLDD+ F TV+ IL+ P+ +LG Y +V ++E+
Sbjct: 61 AAQAIVKS-----REDEKAHQFLMGLDDTTFGTVRSSILALDPLPTLGKIYAMVTQEERH 115
Query: 999 RLIA-AARKPSVQAAAFQIQSKRDDREATDRRYGRKEKL-RCNHCQKPNHTEDQCFEIIG 1172
R +A A + + A T++ G+ K C HC K H CF++ G
Sbjct: 116 RSMARGADRAEITVFA----------AXTEKPGGQTNKSGSCTHCGKTGHDVADCFQLKG 165
Query: 1173 YPPGW-RKNVRKG--------------------------SQQNDQRSGPKVAHVGVETSP 1271
YP W + + +G ++ + Q G V H VE +
Sbjct: 166 YPDWWPTRQMGRGRGRGRGRNSYAGRGATSGRVHYXNAVAEADTQEKGQCVGH-DVERNI 224
Query: 1272 ILGLSQDQYARLVQFLNPDNENSKVAGSTTNPTANMAGKINFDKPWVIDSGATEHITCDE 1451
I GL+ D + +L+ L + N++ + GK + W++DSGA+ H+T
Sbjct: 225 IPGLNDDNFQKLMALLRNGSSNAE----------KLTGKNKIVEEWILDSGASMHMTGRR 274
Query: 1452 RFLEIGTETGTSLPVKIPNGDTIPVKNVGNARLPNGLKIHRVLNIPTFQCNLLSVSRLTN 1631
+ + T+ V +P+G +G +L L + VL +P+ +CNL+S+ +L
Sbjct: 275 DLFDWLRKWETAC-VGLPDGTKTVANEMGYVKLSKDLCLKNVLYVPSLKCNLISIGQLLK 333
Query: 1632 DFNCALIFFPDFCVMQDLPSRNLIGVGRQFDGLYCLEPVKNEGM-AMSVTVDPEIWHRRL 1808
+ + + F FCV+QD SRN IGVG+ +G+Y +P++ E + A+ V E+WHRRL
Sbjct: 334 EKDYIVTFTDSFCVIQDRTSRNPIGVGKLRNGVYYYKPLQGEKVNAVKVEEKYELWHRRL 393
Query: 1809 GHASGAKLQKLPILAKSNNGNNI-------ICDSCVRAKQTRLPFPSSSIKTNSCFELIH 1967
GH S L + L GNN+ +CDSC R KQ R F S+ + F LIH
Sbjct: 394 GHPSDRVLASIHSL-----GNNVMKGIEDYVCDSCCRGKQVRNSFQLSNKRAFEIFNLIH 448
Query: 1968 CDIWGSYKTASFSGAHYFLSIVDDYSRGVWIFLMKQKSEVGHILTMFCNMVKTQFDKKVK 2147
DIWG Y+T + SGAHYFL+IVDD+SRGVWI+LMK+KSE IL FC M KTQFDK VK
Sbjct: 449 VDIWGPYRTPTTSGAHYFLTIVDDHSRGVWIYLMKEKSETKDILQNFCFMTKTQFDKPVK 508
Query: 2148 RIRSDNGAEFQSTYMLDYYKEHGIVLETSCTYTPQQNGVVERKHRHILEVARALRFQENL 2327
IRSDNG EF M+ +YK GI+ E+S TPQ NG VERKH+HIL +AR LRFQ L
Sbjct: 509 CIRSDNGLEFCXGQMMSFYKREGILRESSLVNTPQXNGRVERKHQHILNIARTLRFQACL 568
Query: 2328 PIEFWGECVLTAVYIINRLPSRAINDKTQHEILLGKEPVYDHMRVFGCLAYAHDNKRK-D 2504
PI+FWGECVLTA Y+INR P+ ++ KT +EIL G++P Y+H+RVFG L YAH R D
Sbjct: 569 PIDFWGECVLTAAYLINRTPTPILDGKTPYEILFGEKPNYEHLRVFGSLCYAHKKSRSND 628
Query: 2505 KFDERGRPCIFVGYPNGQKGYRVYDLKNREIYTSRDVTFVEHSYPFKEKNSELGHKINPI 2684
KFD R R C F GYP G+KG+++ DL+ +E + SRDV F E +PF + S G K
Sbjct: 629 KFDXRSRRCXFXGYPYGKKGWKLXDLETKEQFESRDVIFHETIFPFCQ--SSKGDKEQKF 686
Query: 2685 NGDDAWESATVEAQHEYITGGDSINIDLVENDSQEGTQQELTTMGHEQDDSGPIQELTIA 2864
+ ES YI D I E +S++ +++ G E ++G
Sbjct: 687 QNNGNIES--------YIEDDDVIVKKTCERESEKNIERD---KGEENMETG-------- 727
Query: 2865 PENEIAHEHHTTPEMKNEIEVRRGQRTRRQPKHLENFVTDMPPSVDHSQPTPTSGTSTV- 3041
E + EM + RG R ++P+HL++++ S+ T S S++
Sbjct: 728 -------EDQSQGEM-----LGRGHRQHKEPRHLQDYICYSARSLS----TLCSKASSIQ 771
Query: 3042 -------YPLSQFVSYNKFSEAHKAFLAAITSRDEPKYFHQAIKDPNWCDAMKKEVDALE 3200
YP++ +V+Y KFS H+AFLA I EP+ + +A+ D W +AM KE++ALE
Sbjct: 772 KVPSGKPYPIANYVTYTKFSVGHRAFLAXINIEKEPRTYKEAVXDNRWREAMAKEIEALE 831
Query: 3201 ANGTWKLVHFPQGKRAIDSKWVYKIKYKPNGEIERYKARLVAKGFTQMEGIDFHETFAPV 3380
N TWK+V P K+AI KW+YKIKY +G IERYKARLVA+GFTQ+EGID+ E F+PV
Sbjct: 832 TNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEXFSPV 891
Query: 3381 AKLVTVRCLLTVAAKRGWEVHQLDVNNAFLHGDLAEEVYMKIPQGFAKKGEMRVCKLQKS 3560
AK+ +VRC L V + WE+HQ+DVNNAFLHGDL EEVYMK+P+GF G+ +VCKLQKS
Sbjct: 892 AKMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKS 951
Query: 3561 LYGLKQASRNWYQKFTRALLDIGFRQSHADHSLFIFKSDNIHIAALIYVDDVLLAGNDRE 3740
LYGLKQASR W+ K T AL + GF+QS AD+SLF ++ NI + L+YVDD++LAGND +
Sbjct: 952 LYGLKQASRQWFAKLTTALKEYGFQQSLADYSLFTYRRGNIVMNLLVYVDDLILAGNDNK 1011
Query: 3741 RIVNIKSYLDAKFSINDLGPLKYFLGIEVARSSEGFVLSQRKYTLDILEECGLQASRPSA 3920
K++LD KF I +LG LKY LGIEVAR +G LSQRKY L+I++ECGL +RP
Sbjct: 1012 VCEAFKNFLDRKFGIKNLGQLKYILGIEVARGKDGLFLSQRKYALNIIKECGLLGARPVE 1071
Query: 3921 IPMEQNIKLHFEDNSPIIDAAQYRRLVGRLLYLTVTRPDITFSVNLLSQFISCPRQTHMN 4100
PME+N KL + + D YRRLVGRL+YLTVTRPD+T+ V++LSQF+ PR+ H++
Sbjct: 1072 FPMEENHKLALANGRLLNDPGMYRRLVGRLIYLTVTRPDLTYXVHVLSQFMQSPREEHLD 1131
Query: 4101 AAVRVLRYLKMTPGQGLFLLADGGLSLEAYCDADWGGCQFTRRSSTGYFISLGGAPVSWR 4280
AA RV+RYLK PGQG+ L AD L L Y D+DW C TRRS +G + LG +P+SWR
Sbjct: 1132 AAYRVVRYLKKGPGQGIVLKADNDLQLYCYSDSDWXSCPLTRRSISGCCVKLGTSPISWR 1191
Query: 4281 TKKQSVVARSSAEAEYRAMAATVSELLWLRWMLKDLGAHQHGPTPMFCDNQAARHIAVNP 4460
KKQ ++RSSAE EY +MA SEL WL+ +L LG P ++CDN+AA HIA NP
Sbjct: 1192 CKKQGTISRSSAEVEYXSMAMAASELTWLKSLLASLGVLHDKPMKLYCDNKAALHIAANP 1251
Query: 4461 VFHERTKHVEMDCYFVRERVERGDIEPRKISTNLQIADILTKALGTVRFRFLRSKLGVRD 4640
VFHERTKH+E+DC+FVRE+V+ G+I + + LQ AD+ TKALG +F FL SKLG+RD
Sbjct: 1252 VFHERTKHIEIDCHFVREKVQSGEIVTTYLPSKLQXADMFTKALGRQQFLFLSSKLGIRD 1311
Query: 4641 LHLPT 4655
LH PT
Sbjct: 1312 LHAPT 1316
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 1140 bits (2948), Expect = 0.0
Identities = 628/1509 (41%), Positives = 880/1509 (58%), Gaps = 56/1509 (3%)
Frame = +3
Query: 297 MSKSDETKAEVFPVQSSGIDV--MSPYYIHASDNPGQVYVSELLHDGNYRDWANDMSNAL 470
MS ++E + P + DV +SPY + +SDNPG + S +L NY +W+ +M NAL
Sbjct: 1 MSIAEEVSSATHPRTNQQPDVTKVSPYTLASSDNPGAMISSVMLTGDNYNEWSTEMLNAL 60
Query: 471 FAKNKIGFVDGTIPMPKPDSPELIYWMRCNAMVKGWLNSAMNKEIRSSVKYAKTAREIWI 650
AK K GF++G+I P D+P+ W N+M+ GW+ +++ +++S+V + A ++W
Sbjct: 61 QAKRKTGFINGSISKPPLDNPDYENWQAVNSMIVGWIRASIEPKVKSTVTFISDAHQLWS 120
Query: 651 DLEERFGKESAPRAYELRQALTLLRQEKLSVSAYYTKLRGLWDEIQSVSPTPRCTCSGCT 830
+L++RF + R ++++ L RQ+ V YY +L LW+E Q P C C CT
Sbjct: 121 ELKQRFSVGNKVRVHQIKAQLAACRQDGQPVIDYYGRLCKLWEEFQIYKPITVCKCGLCT 180
Query: 831 CDIQKQLTVMREKEQLYEFLMGLDDS-FATVKIQILSTKPILSLGAAYHLVAEDEQQRLI 1007
C + + RE+E++++F++GLDDS F + +++ P SLG Y V +EQ+
Sbjct: 181 CGATLEPSKEREEEKIHQFVLGLDDSRFGGLSATLIAMDPFPSLGEIYSRVVREEQRLAS 240
Query: 1008 AAARKPSVQAAAF---QIQSKRDDREATDRRYGRKEKLRCNHCQKPNHTEDQCFEIIGYP 1178
R+ A F Q + D R + R + C+HC + H + C++I+G+P
Sbjct: 241 VQIREQQQSAIGFLTRQSEVTADGRTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFP 300
Query: 1179 PGWRKNVRKGSQ--------------QNDQRSGPKVAHVGVETSPILGLSQ---DQYARL 1307
W + G + N R +V TS + + DQ +
Sbjct: 301 DWWTERTNGGGRGSSSRGRGGRSSGSNNSGRGRGQVTAAHATTSNLSSFPEFTPDQLRVI 360
Query: 1308 VQFLNPDNENSKVAGSTTNPTANMAGKINFDKPWVIDSGATEHITCDERFLEIGTETGTS 1487
Q + N + + ++GK+ ++D+GA+ H+T + L T S
Sbjct: 361 TQMIQNKNNGT---------SDKLSGKMKLGDV-ILDTGASHHMT-GQLSLLTNIVTIPS 409
Query: 1488 LPVKIPNGDTIPVKNVGNARLPNGLKIHRVLNIPTFQCNLLSVSRLTNDFNCALIFFPDF 1667
V + ++G +L + + VL +P C+L+SVS+L C +F
Sbjct: 410 CSVGFADDRKTFAISMGTFKLSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTI 469
Query: 1668 CVMQDLPSRNLIGVGRQFDGLYCLEPVKNEGM-AMSVTVDPEIWHRRLGHASGAKLQKLP 1844
CV+QD SR LIG G + DG+Y L + + VT D +WH+RLGH S + L LP
Sbjct: 470 CVLQDRFSRTLIGTGEERDGVYYLTDAATTTVHKVDVTTDHALWHQRLGHPSFSVLSSLP 529
Query: 1845 ILAKSN-NGNNIICDSCVRAKQTRLPFPSSSIKTNSCFELIHCDIWGSYKTASFSGAHYF 2021
+ + S+ + ++ CD C RAKQTR FP SS K+ CF LIHCD+WG Y+ S GA YF
Sbjct: 530 LFSGSSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYF 589
Query: 2022 LSIVDDYSRGVWIFLMKQKSEVGHILTMFCNMVKTQFDKKVKRIRSDNGAEFQSTYMLDY 2201
L+IVDD+SR VW +L+ KSEV +LT F + QF K VK IRSDNG EF + Y
Sbjct: 590 LTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEFMC--LSSY 647
Query: 2202 YKEHGIVLETSCTYTPQQNGVVERKHRHILEVARALRFQENLPIEFWGECVLTAVYIINR 2381
+KE GIV +TSC TPQQNG VERKHRHIL V+RAL FQ +LPI+FWGE V+TA Y+INR
Sbjct: 648 FKEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINR 707
Query: 2382 LPSRAINDKTQHEILLGKEPVYDHMRVFGCLAYAHDNKR-KDKFDERGRPCIFVGYPNGQ 2558
PS N + +E+L G +P YD +RVFG YAH R KDKF ER R CIFVGYP GQ
Sbjct: 708 TPSSIHNGLSPYELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQ 767
Query: 2559 KGYRVYDLKNREIYTSRDVTFVEHSYPFKEKNSELGHK---INPINGDDAWESATVEAQH 2729
KG++VYDL E SRDV F E+ +P+ + + PI D+ W T
Sbjct: 768 KGWKVYDLSTNEFIVSRDVVFRENVFPYATNEGDTIYTPPVTCPITYDEDWLPFTTLEDR 827
Query: 2730 EYITGGDSINI--------DLVENDSQEGTQQELTTMGHEQDDSGPIQELTIAPENEIAH 2885
G D ++ D+ E+D++ T Q L T + T P N +
Sbjct: 828 ----GSDENSLSDPPVCVTDVSESDTEHDTPQSLPTPVDDPLSPSTSVTPTQTPTNSSSS 883
Query: 2886 ----------EHHTTPEMKNEIEVRRGQRTRRQPKHLENFV---TDMPPSVDHSQPTPTS 3026
+ TTP ++N R+G+R +Q L++++ P+ H TS
Sbjct: 884 TSPSTNVSPPQQDTTPIIENT-PPRQGKRQVQQLARLKDYILYNASCTPNTPHVLSPSTS 942
Query: 3027 GTSTV------YPLSQFVSYNKFSEAHKAFLAAITSRDEPKYFHQAIKDPNWCDAMKKEV 3188
+S+ YPL+ ++ FS HK FLAAIT+ DEPK+F +A+K W DAM KEV
Sbjct: 943 QSSSSIQGNSQYPLTDYIFDECFSAGHKVFLAAITANDEPKHFKEAVKVKVWNDAMYKEV 1002
Query: 3189 DALEANGTWKLVHFPQGKRAIDSKWVYKIKYKPNGEIERYKARLVAKGFTQMEGIDFHET 3368
DALE N TW +V P GK AI S+WVYK K+ +G +ERYKARLV +G Q+EG D+ ET
Sbjct: 1003 DALEVNKTWDIVDLPTGKVAIGSQWVYKTKFNADGTVERYKARLVVQGNNQIEGEDYTET 1062
Query: 3369 FAPVAKLVTVRCLLTVAAKRGWEVHQLDVNNAFLHGDLAEEVYMKIPQGFAKKGEMRVCK 3548
FAPV K+ TVR LL + A WEV+Q+DV+NAFLHGDL EEVYMK+P GF +VC+
Sbjct: 1063 FAPVVKMTTVRTLLRLVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCR 1122
Query: 3549 LQKSLYGLKQASRNWYQKFTRALLDIGFRQSHADHSLFIFKSDNIHIAALIYVDDVLLAG 3728
L+KSLYGLKQA R W++K + AL GF Q + D+S F + I + L+YVDD+++ G
Sbjct: 1123 LRKSLYGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKGIELRVLVYVDDLIICG 1182
Query: 3729 NDRERIVNIKSYLDAKFSINDLGPLKYFLGIEVARSSEGFVLSQRKYTLDILEECGLQAS 3908
ND + K YL FS+ DLG LKYFLGIEV+R +G LSQRKY LDI+ + G +
Sbjct: 1183 NDEYMVQKFKEYLGRCFSMKDLGKLKYFLGIEVSRGPDGIFLSQRKYALDIISDSGTLGA 1242
Query: 3909 RPSAIPMEQNIKLHFEDNSPIIDAAQYRRLVGRLLYLTVTRPDITFSVNLLSQFISCPRQ 4088
RP+ P+EQN L +D + D +RRLVGRLLYL TRP++++SV++LSQF+ PR+
Sbjct: 1243 RPAYTPLEQNHHLASDDGPLLQDPKPFRRLVGRLLYLLHTRPELSYSVHVLSQFMQAPRE 1302
Query: 4089 THMNAAVRVLRYLKMTPGQGLFLLADGGLSLEAYCDADWGGCQFTRRSSTGYFISLGGAP 4268
H+ AA+R++RYLK +PGQG+ L ++ L+LE YCD+D+ C TRRS + Y + LGG+P
Sbjct: 1303 AHLEAAMRIVRYLKGSPGQGILLSSNKDLTLEVYCDSDFQSCPLTRRSLSAYVVLLGGSP 1362
Query: 4269 VSWRTKKQSVVARSSAEAEYRAMAATVSELLWLRWMLKDLGAHQHGPTPMFCDNQAARHI 4448
+SW+TKKQ V+ SSAEAEYRAM+ + E+ WL +LK+LG PT +FCD++AA I
Sbjct: 1363 ISWKTKKQDTVSHSSAEAEYRAMSVALKEIKWLNKLLKELGITLAAPTRLFCDSKAAISI 1422
Query: 4449 AVNPVFHERTKHVEMDCYFVRERVERGDIEPRKISTNLQIADILTKALGTVRFRFLRSKL 4628
A NPVFHERTKH+E DC+ VR+ V G I + T+ Q+ADI TKALG +F +L SKL
Sbjct: 1423 AANPVFHERTKHIERDCHSVRDAVRDGIITTHHVRTSEQLADIFTKALGRNQFIYLMSKL 1482
Query: 4629 GVRDLHLPT 4655
G+++LH PT
Sbjct: 1483 GIQNLHTPT 1491
>gb|KYP61781.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1413
Score = 1136 bits (2938), Expect = 0.0
Identities = 612/1425 (42%), Positives = 868/1425 (60%), Gaps = 17/1425 (1%)
Frame = +3
Query: 432 NYRDWANDMSNALFAKNKIGFVDGTIPMPKPDSPELIYWMRCNAMVKGWLNSAMNKEIRS 611
NY +WA M AL A+ K GF+DGTI P S +L W N ++ W+ + + +RS
Sbjct: 10 NYDEWARSMRTALRARKKFGFIDGTIKRPAEKSSDLEDWWTNNELLVSWIMNTIEPTLRS 69
Query: 612 SVKYAKTAREIWIDLEERFGKESAPRAYELRQALTLLRQEKLSVSAYYTKLRGLWDEIQS 791
++ + + A+++W D++ERF + PR +L+ L +Q+ ++++AYY KL+ LW+E+ +
Sbjct: 70 TISHMEVAQDLWTDIKERFSISNGPRIQQLKAELAECKQKGMTIAAYYGKLKKLWEELAN 129
Query: 792 VSPTPRCTCSGCTCDIQKQLTVMREKEQLYEFLMGLDD-SFATVKIQILSTKPILSLGAA 968
P CTC+ CTC++ +L RE+E++++ MGLD+ ++ TV+ +L+ P+ SL
Sbjct: 130 HEQIPACTCAACTCNLAFKLEKKREEEKIHQIFMGLDETTYGTVRSNLLAQDPLPSLNKI 189
Query: 969 YHLVAEDEQQRLIAAARKPSVQAAAFQIQSKRDDREATDRRYGRKEKLRCNHCQKPNHTE 1148
Y + ++E R I ++ + +F +Q+ R + + + + C+ C + H
Sbjct: 190 YSTLVQEEHMRSITRGKEERNEIMSFAVQTGGKSRVKIE---VKDKNVICSSCNRSGHDL 246
Query: 1149 DQCFEIIGYPPGWRKNVRK-GSQQNDQRSGPKVAHVGVETSPILGLSQDQYARL----VQ 1313
+ CF++IGYP W + R+ G R G + G L + A
Sbjct: 247 ESCFQLIGYPEWWGERPREIGRGSGRGRVGQQGKTFGGRGRGALTKANVAQASTGGPEFN 306
Query: 1314 FLNPDNENSKVAGSTTNPTANMAGKINFDKPWVID--SGATEHITCDERFLEIGTETGTS 1487
+ D + S V+G + +N K + +GA+ H+T +L
Sbjct: 307 AMITDADKSTVSGLNGEQWQTLVNLLNNVKLGAAEKLTGASRHMTGTIEYL-TDVRNVLQ 365
Query: 1488 LPVKIPNGDTIPVKNVGNARLPNGLKIHRVLNIPTFQCNLLSVSRLTNDFNCALIFFPDF 1667
P+ +P+G I G L + LK++ VL +P+ +CNL+SVS+L N+ NC + F F
Sbjct: 366 CPIGLPDGKQIFATREGTVVLNDTLKLNHVLYVPSLKCNLISVSQLINELNCKVQFTNKF 425
Query: 1668 CVMQDLPSRNLIGVGRQFDGLYCLEPVKNEGMAMSVTVDP-EIWHRRLGHASGAKLQKLP 1844
CV+QD R +IG G Q +GLY + + A+ + ++WH+RLGH S ++ +P
Sbjct: 426 CVIQDRILRTVIGAGEQREGLYYFQGMTATAAAVKSDENVFDLWHKRLGHPSPKVVELIP 485
Query: 1845 IL--AKSNNGNNIICDSCVRAKQTRLPFPSSSIKTNSCFELIHCDIWGSYKTASFSGAHY 2018
+ ++S+ N CD C+RAKQ R FP S KT F+LIHCD+WG Y+T S GA Y
Sbjct: 486 NIGFSRSDALCNKACDVCLRAKQCRESFPISINKTMVIFQLIHCDLWGPYRTISHCGARY 545
Query: 2019 FLSIVDDYSRGVWIFLMKQKSEVGHILTMFCNMVKTQFDKKVKRIRSDNGAEFQSTYMLD 2198
FL+IVDDYSR VWI+L+++K EV + F MV+ QF K+VK +RSDNG EF M
Sbjct: 546 FLTIVDDYSRAVWIYLLEEKKEVFTRMCQFFAMVERQFGKQVKVVRSDNGTEF--VCMDS 603
Query: 2199 YYKEHGIVLETSCTYTPQQNGVVERKHRHILEVARALRFQENLPIEFWGECVLTAVYIIN 2378
Y++ HGIV ETSCT TPQQNG VERKHRHIL VARALRFQ +LPI+FWGECVLTA Y+IN
Sbjct: 604 YFQNHGIVHETSCTGTPQQNGRVERKHRHILNVARALRFQAHLPIKFWGECVLTAGYLIN 663
Query: 2379 RLPSRAINDKTQHEILLGKEPVYDHMRVFGCLAYAHDNKRK-DKFDERGRPCIFVGYPNG 2555
R PS ++ KT +E+L K P +H+RVFG L Y H+ K DKF R R C+F+GYP G
Sbjct: 664 RTPSIVLHGKTPYEMLYNKPPSLNHLRVFGSLCYVHNRDSKGDKFASRSRRCVFLGYPYG 723
Query: 2556 QKGYRVYDLKNREIYTSRDVTFVEHSYPFKEKNSELGHKINPINGDDAWESATVEAQHEY 2735
+KG+RVYDL+ TSRDV F E +P E + I+ I D+ +V+ E
Sbjct: 724 KKGWRVYDLELGVFLTSRDVVFSESEFPCAESQNSTPKHID-IEKDNLAPWNSVDDDDEM 782
Query: 2736 ITGGDSINIDLVENDSQEGTQQELTTMGHEQDDSGPIQELTIAPENEIAHEHHTTPEMKN 2915
D N+ + QE T + D E ++ ++ T P
Sbjct: 783 EIAQDDFENRKGANNGSIVSLQEPTGPHTDSHDI----ETSVIERGGLSAYVSTHP---- 834
Query: 2916 EIEVRRGQRTRRQPKHLENFVTDMPPSVDHSQPTPTS-----GTSTVYPLSQFVSYNKFS 3080
+ RG R + L +FV + ++ P+P+S + T Y ++ +V+YN FS
Sbjct: 835 ---LGRGHRAKMPSTRLRDFVAN---TICRLDPSPSSLATSRPSGTPYLITHYVNYNNFS 888
Query: 3081 EAHKAFLAAITSRDEPKYFHQAIKDPNWCDAMKKEVDALEANGTWKLVHFPQGKRAIDSK 3260
++ FLAA++ EP+ F QA+KD W AM+ E+ ALE NGTW L P GK+AI K
Sbjct: 889 AHYRHFLAAVSIGTEPQSFAQAMKDEQWQQAMQAEIQALENNGTWTLEPLPPGKKAIGCK 948
Query: 3261 WVYKIKYKPNGEIERYKARLVAKGFTQMEGIDFHETFAPVAKLVTVRCLLTVAAKRGWEV 3440
WVY+IKY +G IER+KARLV G Q+EG+D++ETFAPVAK+VT+R LL VAA R WE+
Sbjct: 949 WVYRIKYNSDGSIERFKARLVILGNNQVEGLDYNETFAPVAKMVTMRTLLAVAAARKWEL 1008
Query: 3441 HQLDVNNAFLHGDLAEEVYMKIPQGFAKKGEMRVCKLQKSLYGLKQASRNWYQKFTRALL 3620
HQ+DV+NAFLHGDL EEVYMK+P GF + +VC+L+KSLYGLKQA R W+ K AL
Sbjct: 1009 HQMDVHNAFLHGDLKEEVYMKLPPGFRSQASGKVCRLRKSLYGLKQAPRCWFAKLAGALK 1068
Query: 3621 DIGFRQSHADHSLFIFKSDNIHIAALIYVDDVLLAGNDRERIVNIKSYLDAKFSINDLGP 3800
GF QS +DHSLF + + + + L+YVDD++++GND I K YL+A F + DLG
Sbjct: 1069 RYGFAQSSSDHSLFTLQRERVQLHVLVYVDDLVISGNDNAAIKAFKLYLNACFHMKDLGM 1128
Query: 3801 LKYFLGIEVARSSEGFVLSQRKYTLDILEECGLQASRPSAIPMEQNIKLHFEDNSPIIDA 3980
LKYFLGIEVAR+S G L QRKY LDI+ E GL ++P+ PM+Q+ +L + + D
Sbjct: 1129 LKYFLGIEVARNSTGIFLCQRKYALDIISEVGLLGAKPAGFPMDQHHQLPLAKGTLLPDP 1188
Query: 3981 AQYRRLVGRLLYLTVTRPDITFSVNLLSQFISCPRQTHMNAAVRVLRYLKMTPGQGLFLL 4160
+YRRLVGRL+YL+VTRP++++ V+ L+QF+ PRQ H +AA+RV+RYLK PGQG+ L
Sbjct: 1189 ERYRRLVGRLIYLSVTRPELSYCVHTLAQFMQHPRQEHWDAALRVVRYLKGNPGQGILLR 1248
Query: 4161 ADGGLSLEAYCDADWGGCQFTRRSSTGYFISLGGAPVSWRTKKQSVVARSSAEAEYRAMA 4340
A+ L L A+CD+DW C TRRS TG+FI LG +P+SW+TKKQ V+RSS+EAEYR+MA
Sbjct: 1249 ANCDLQLYAWCDSDWASCPLTRRSLTGWFILLGDSPISWKTKKQHTVSRSSSEAEYRSMA 1308
Query: 4341 ATVSELLWLRWMLKDLGAHQHGPTPMFCDNQAARHIAVNPVFHERTKHVEMDCYFVRERV 4520
T EL WL+ +L LG GP ++CDNQAA HIA N VFHERTKH+E+DC+FV + +
Sbjct: 1309 TTTCELKWLKELLSCLGCAHSGPMKLYCDNQAALHIAANLVFHERTKHIEVDCHFVHDEL 1368
Query: 4521 ERGDIEPRKISTNLQIADILTKALGTVRFRFLRSKLGVRDLHLPT 4655
+G I + ++ Q+ADI TKALG +F L SKLG+ + PT
Sbjct: 1369 LQGTISTHHVPSHAQLADIFTKALGKTQFDCLLSKLGICNPSAPT 1413
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 1130 bits (2923), Expect = 0.0
Identities = 629/1515 (41%), Positives = 878/1515 (57%), Gaps = 75/1515 (4%)
Frame = +3
Query: 321 AEVFPVQSSGIDVMSPYYIHASDNPGQVYVSELLHDGNYRDWANDMSNALFAKNKIGFVD 500
A V SS + Y I+ASDNPG + S +L + NY +W+ ++ N L AK K+GF+D
Sbjct: 6 ALVTSTSSSNTSSTTAYLINASDNPGALISSVVLKENNYAEWSEELQNFLRAKQKLGFID 65
Query: 501 GTIPMPKPDSPELIYWMRCNAMVKGWLNSAMNKEIRSSVKYAKTAREIWIDLEERFGKES 680
G+IP P D PEL W+ N+M+ GW+ ++++ IRS+V + A ++W +L RF +
Sbjct: 66 GSIPKPAAD-PELSLWIAINSMIVGWIRTSIDPTIRSTVGFVSEASQLWENLRRRFSVGN 124
Query: 681 APRAYELRQALTLLRQEKLSVSAYYTKLRGLWDEIQSVSPTPRCTCSGCTCDIQKQLTVM 860
R L+ + Q+ V AYY +L LW+E+Q+ C C + DI+K+
Sbjct: 125 GVRKTLLKDEIAACTQDGQPVLAYYGRLIKLWEELQNYKSGRECKCEAAS-DIEKE---- 179
Query: 861 REKEQLYEFLMGLDDSFATVKIQILSTKPILSLGAAYHLVAEDEQQRLIAAARKPSV--- 1031
RE +++++FL+GLD F++++ I +P+ L Y V +EQ + A+R V
Sbjct: 180 REDDRVHKFLLGLDSRFSSIRSSITDIEPLPDLYQVYSRVVREEQN--LNASRTKDVVKT 237
Query: 1032 QAAAFQIQSKRDDREATDRRYGRKEKLRCNHCQKPNHTEDQCFEIIGYPPGWRKNVRKGS 1211
+A F +QS +T R+ K L C HC + H QCF + GYP W + + +
Sbjct: 238 EAIGFSVQS------STTPRFRDKSTLFCTHCNRKGHEVTQCFLVHGYPDWWLEQNPQEN 291
Query: 1212 QQNDQRSGP-----------------------KVAHVGVETSPILGLSQDQYARLVQFLN 1322
Q + + G + + + G DQ A+L+ L
Sbjct: 292 QPSTRGRGSNGRGSSSGRGGNRSSAPTTRGRGRANNAQAAAPTVSGDGNDQIAQLISLLQ 351
Query: 1323 ---PDNENSKVAGSTTNPTANMAGKINFDKPWVIDSGATEHITCDERFLEIGTETGTSLP 1493
P + + +++G+T VID+GA+ H+T D L + T P
Sbjct: 352 AQRPSSSSERLSGNTCLTDG------------VIDTGASHHMTGDCSIL-VDVFDITPSP 398
Query: 1494 VKIPNGDTIPVKNVGNARLPNGLKIHRVLNIPTFQCNLLSVSRLTNDFNCALIFFPDFCV 1673
V P+G G L + K+H VL +P F C L+SVS+L + IF FC
Sbjct: 399 VTKPDGKASQATKCGTLLLHDSYKLHDVLFVPDFDCTLISVSKLLKQTSSIAIFTDTFCF 458
Query: 1674 MQDLPSRNLIGVGRQFDGLYCLEPV---KNEGMAMSVTVDPEIWHRRLGHASGAKLQKLP 1844
+QD R LIG G + +G+Y V + + + ++WHRRLGH S + L LP
Sbjct: 459 LQDRFLRTLIGAGEEREGVYYFTGVLAPRVHKASSDFAISGDLWHRRLGHPSTSVLLSLP 518
Query: 1845 ILAKSNNGNNII--CDSCVRAKQTRLPFPSSSIKTNSCFELIHCDIWGSYKTASFSGAHY 2018
+S+ G + I CD+C R+KQTR FP S+ KT CF LIH D+WG Y+T S +GA Y
Sbjct: 519 ECNRSSQGFDKIDSCDTCFRSKQTREVFPISNNKTMECFSLIHGDVWGPYRTPSTTGAVY 578
Query: 2019 FLSIVDDYSRGVWIFLMKQKSEVGHILTMFCNMVKTQFDKKVKRIRSDNGAEFQSTYMLD 2198
FL++VDDYSR VW +LM K+EV ++ FC M + QF K+VK R+DNG EF +
Sbjct: 579 FLTLVDDYSRSVWTYLMSSKTEVSQLIKNFCAMSERQFGKQVKAFRTDNGTEFMC--LTP 636
Query: 2199 YYKEHGIVLETSCTYTPQQNGVVERKHRHILEVARALRFQENLPIEFWGECVLTAVYIIN 2378
Y++ HGI+ +TSC TPQQNG VERKHRHIL VARA FQ NLP++FWGE +LTA ++IN
Sbjct: 637 YFQTHGILHQTSCVDTPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTATHLIN 696
Query: 2379 RLPSRAINDKTQHEILLGKEPVYDHMRVFGCLAYAHDNKR-KDKFDERGRPCIFVGYPNG 2555
R PS + KT +E+L G+ P YD +R FGCL YAH R KDKF R R C+F+GYP+G
Sbjct: 697 RTPSAVLKGKTPYELLFGERPSYDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHG 756
Query: 2556 QKGYRVYDLKNREIYTSRDVTFVEHSYPFK---EKNSELGHKINPINGDDAWESATVEAQ 2726
+K +RVYDL+ +I+ SRDV F E YP+ + N L P+ DD + + +
Sbjct: 757 KKAWRVYDLETGKIFASRDVRFHEDIYPYATATQSNVPLPPPTPPMVNDDWFLPISTQVD 816
Query: 2727 HEYITGGDSIN-------------IDLVENDSQEGTQQELTTMGHEQDDSGPIQ----EL 2855
+ S + ID + S +E+ ++ S I +L
Sbjct: 817 STNVDSSSSSSPAQSGSIDQPPRSIDQSPSTSTNPVPEEIGSIVPSSSPSRSIDRSTSDL 876
Query: 2856 TIAPENEIAHE-HHTTPEMKNEIEVR-RGQRTRRQPKHLENFVTD--------------- 2984
+ + E+ +TP E+ +G R +++ L++FVT+
Sbjct: 877 SASDTTELLSTGESSTPSSPGLPELLGKGCREKKKSVLLKDFVTNTTSKKKTASHNIHSP 936
Query: 2985 ---MPPSVDHSQPTPTSGTSTVYPLSQFVSYNKFSEAHKAFLAAITSRDEPKYFHQAIKD 3155
+P + S + T+YPLS F++ + +S H AF+AAI +EPK+F AI
Sbjct: 937 SQVLPSGLPTSLSADSVSGKTLYPLSDFLTNSGYSANHIAFMAAILDSNEPKHFKDAILI 996
Query: 3156 PNWCDAMKKEVDALEANGTWKLVHFPQGKRAIDSKWVYKIKYKPNGEIERYKARLVAKGF 3335
WC+AM KE+DALEAN TW + P GK+AI SKWVYK+KY +G +ER+KARLV G
Sbjct: 997 KEWCEAMSKEIDALEANHTWDITDLPHGKKAISSKWVYKLKYNSDGTLERHKARLVVMGN 1056
Query: 3336 TQMEGIDFHETFAPVAKLVTVRCLLTVAAKRGWEVHQLDVNNAFLHGDLAEEVYMKIPQG 3515
Q EG+DF ETFAPVAKL TVR +L VAA + WEVHQ+DV+NAFLHGDL EEVYM++P G
Sbjct: 1057 HQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPG 1116
Query: 3516 FAKKGEMRVCKLQKSLYGLKQASRNWYQKFTRALLDIGFRQSHADHSLFIFKSDNIHIAA 3695
F +VC+L+KSLYGLKQA R W+ K + AL +IGF QS+ D+SLF K+ + I
Sbjct: 1117 FKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIHV 1176
Query: 3696 LIYVDDVLLAGNDRERIVNIKSYLDAKFSINDLGPLKYFLGIEVARSSEGFVLSQRKYTL 3875
L+YVDD+++AGN+ + I KS L F + DLG LKYFLG+EV+R +GF LSQRKY L
Sbjct: 1177 LVYVDDLIVAGNNLDAIDRFKSQLHKCFHMKDLGKLKYFLGLEVSRGPDGFCLSQRKYAL 1236
Query: 3876 DILEECGLQASRPSAIPMEQNIKLHFEDNSPIIDAAQYRRLVGRLLYLTVTRPDITFSVN 4055
DI++E GL +PSA+P+ N KL + QYRRLVGR +YLT+TRPD++++V+
Sbjct: 1237 DIVKETGLLGCKPSAVPIALNHKLASITGPVFTNPEQYRRLVGRFIYLTITRPDLSYAVH 1296
Query: 4056 LLSQFISCPRQTHMNAAVRVLRYLKMTPGQGLFLLADGGLSLEAYCDADWGGCQFTRRSS 4235
+LSQF+ P H AA+R++RYLK +P QG+FL +D L + AYCD+D+ C TRRS
Sbjct: 1297 ILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDSDYNACPLTRRSL 1356
Query: 4236 TGYFISLGGAPVSWRTKKQSVVARSSAEAEYRAMAATVSELLWLRWMLKDLGAHQHGPTP 4415
+ Y + LG +P+SW+TKKQ V+ SSAEAEYRAMA T+ EL WL+ +LKDLG H P
Sbjct: 1357 SAYVVYLGDSPISWKTKKQDTVSYSSAEAEYRAMAYTLKELKWLKALLKDLGVHHSSPMK 1416
Query: 4416 MFCDNQAARHIAVNPVFHERTKHVEMDCYFVRERVERGDIEPRKISTNLQIADILTKALG 4595
+ CD++AA HIA NPVFHERTKH+E DC+ VR+ V I I T Q+AD+LTK+L
Sbjct: 1417 LHCDSEAAIHIAANPVFHERTKHIESDCHKVRDAVLDKLITTEHIYTEDQVADLLTKSLP 1476
Query: 4596 TVRFRFLRSKLGVRD 4640
F L S LGV D
Sbjct: 1477 RPTFERLLSTLGVTD 1491
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 1076 bits (2783), Expect = 0.0
Identities = 601/1464 (41%), Positives = 855/1464 (58%), Gaps = 30/1464 (2%)
Frame = +3
Query: 354 DVMSPYYIHASDNPGQVYVSELLHDGNYRDWANDMSNALF-AKNKIGFVDGTIPMPKPDS 530
++ SP+++ D PG L NY DWA+D+ AL ++ K F++GTI P+P
Sbjct: 16 EMNSPFFLGTGDRPGDFITPTRLRGDNYDDWASDIQLALAGSRRKFEFLEGTITGPQPPY 75
Query: 531 PELIYWMRCNAMVKGWLNSAMNKEIRSSVKYAKTAREIWIDLEERFGKESAPRAYELRQA 710
+ W NAM+ W+ + ++ E++S++ + A+ +W L++R+ + PR +L+ +
Sbjct: 76 TQSD-WNTVNAMLVSWITNTIDPEVKSTLSKFRDAKRLWEHLKQRYAMVNGPRIQQLKTS 134
Query: 711 LTLLRQEK-LSVSAYYTKLRGLWDEIQSVSPTPRCTC-SGCTCDIQKQLTVMREKEQLYE 884
+ Q K +SV+ YY KL LW+E+ P CTC S CT Q RE+ +L++
Sbjct: 135 IAKCEQSKSMSVTTYYGKLNVLWEELFKHEPLISCTCCSSCTAASLHQ--ARREQGKLHD 192
Query: 885 FLMGLD-DSFATVKIQILSTKPILSLGAAYHLVAEDEQQRLIAAARKPS-VQAAAFQIQS 1058
FLMGL+ D +A ++ ILS P+ SL AY LV +D++ RL A + + F +++
Sbjct: 193 FLMGLNTDLYAQLRTNILSQDPLPSLDRAYQLVIQDKRVRLAKAVTEDKPAEVLGFAVRT 252
Query: 1059 KRD-DREATDR-------RYGRKEK-----LRCNHCQKPNHTEDQCFEIIGYPPGW--RK 1193
R T+R + G + + C HC K H ++ C+EI+GYP GW +
Sbjct: 253 GAGRGRGKTERPVCSHCKKTGHETSTCWSLVACPHCHKHGHDKNNCYEIVGYPEGWLDQN 312
Query: 1194 NVRKGSQQNDQRSGPKVAHVGVET-SPILGLSQDQYARLVQFLNPDNENSKVA--GSTTN 1364
G+ ++ Q++G S +G S + + Q P+ + G+
Sbjct: 313 KADGGAGRSRQQAGRGRGSARANAASSTIGASSTK-SSTDQLFTPEQWKALAGLIGNAQV 371
Query: 1365 PTANMAGKINFDKPWVIDSGATEHITCDERFLEIGTETGTSLPVKIPNGDTIPVKNVGNA 1544
P + GK + K W+ID+GAT H+T D +L T V +PNG+++ G+
Sbjct: 372 PNDRLNGKFD-TKSWIIDTGATHHVTGDLSWL-FDTIALFECLVGLPNGESVVATQSGSV 429
Query: 1545 RLPNGLKIHRVLNIPTFQCNLLSVSRLTNDFNCALIFFPDFCVMQDLPSRNLIGVGRQFD 1724
RL N + + VL + CNLLSVS+LT+D +C + F C +QD +R LIG G + D
Sbjct: 430 RLSNNITLKNVLYVSKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQD-HTRELIGTGVRRD 488
Query: 1725 GLYCLEPVKNEGM----AMSVTVDPEIWHRRLGHASGAKLQKLPILAKSNNGNNIICDSC 1892
GLY + + + + E+WH+R+GH S ++ LP ++ N C+ C
Sbjct: 489 GLYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNLKGSLNKACEIC 548
Query: 1893 VRAKQTRLPFPSSSIKTNSCFELIHCDIWGSYKTASFSGAHYFLSIVDDYSRGVWIFLMK 2072
RAK R FP + K FE IHCD+WGSYK S A YFL+I+DD+SR VWI+L+
Sbjct: 549 FRAKHPRDKFPLTDNKATRIFEKIHCDLWGSYKHVSSCAARYFLTIIDDFSRAVWIYLLV 608
Query: 2073 QKSEVGHILTMFCNMVKTQFDKKVKRIRSDNGAEFQSTYMLDYYKEHGIVLETSCTYTPQ 2252
K+EV + F MV QF + VK ++SDNG EF+ +LDY+ GI+ +TSC TPQ
Sbjct: 609 NKTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKC--LLDYFSATGILFQTSCVGTPQ 666
Query: 2253 QNGVVERKHRHILEVARALRFQENLPIEFWGECVLTAVYIINRLPSRAINDKTQHEILLG 2432
QNG VERKH+HIL V RAL FQ NLPI FWGE VL A ++INR PS +++KT EIL G
Sbjct: 667 QNGRVERKHKHILNVGRALHFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFEILFG 726
Query: 2433 KEPVYDHMRVFGCLAYAHDNKRK-DKFDERGRPCIFVGYPNGQKGYRVYDLKNREIYTSR 2609
P Y + FGCL++AHD K K DKF R R C+F+GYP G+KG++++DL +E++ SR
Sbjct: 727 TPPSYAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSR 786
Query: 2610 DVTFVEHSYPFKEKNSELGHKINPINGDDAWESATVEAQHEYITGGDSINIDLVENDSQE 2789
DV F E +PF + +N I D+ + VE ++ D ++ D + Q
Sbjct: 787 DVKFFEDVFPFGNPGA-----VNIIL-DNIVPTVNVEIDSDF---ADFVDDDADLPNPQA 837
Query: 2790 GTQQELTTMGHEQDDSGPIQELTIAPENEIAHEHHTTPEMKNEIEVRRGQRTRRQPKHLE 2969
TQ Q + + P + + +G R + L
Sbjct: 838 QTQNPNLIQPEPQAHQDLLPGPEVVPTVGLDSLGLDNTSNGQSAPMGKGMRDKFPSVLLR 897
Query: 2970 NFVTD--MPPSVDHSQPTPTSGTSTVYPLSQFVSYNKFSEAHKAFLAAITSRDEPKYFHQ 3143
+FVT + S + P+P + T YP++ +++ + FS ++ FLAAI S ++ K F +
Sbjct: 898 DFVTHTVVAESPSPATPSPQHPSGTPYPIAHYINCDNFSVHYRKFLAAIISSNDHKSFKE 957
Query: 3144 AIKDPNWCDAMKKEVDALEANGTWKLVHFPQGKRAIDSKWVYKIKYKPNGEIERYKARLV 3323
A+KD W +M +E+ ALE NGTW L P+GKRA+ S+WVY+ KY NG+IER K+RLV
Sbjct: 958 AMKDVGWQKSMHEEIRALEENGTWTLEPLPKGKRALGSQWVYRTKYFSNGDIERLKSRLV 1017
Query: 3324 AKGFTQMEGIDFHETFAPVAKLVTVRCLLTVAAKRGWEVHQLDVNNAFLHGDLAEEVYMK 3503
G Q GID+HETF+PVAK+ TVR L +AA + WE+HQ+DV+NAFLHGDL EEVYMK
Sbjct: 1018 VLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMK 1077
Query: 3504 IPQGFAKKGEMRVCKLQKSLYGLKQASRNWYQKFTRALLDIGFRQSHADHSLFIFKSDNI 3683
+P GF VC+L+KSLYGLKQA R W+ K AL GF QS++++SLF + N+
Sbjct: 1078 LPPGFESSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSNYSLFTYTKGNV 1137
Query: 3684 HIAALIYVDDVLLAGNDRERIVNIKSYLDAKFSINDLGPLKYFLGIEVARSSEGFVLSQR 3863
I L+YVDD++++ ND + K+YL+ F + DLG LKYFLGIEVARSS G L QR
Sbjct: 1138 QINVLVYVDDLIISRNDSAALKTFKAYLNDCFKMKDLGVLKYFLGIEVARSSAGLFLCQR 1197
Query: 3864 KYTLDILEECGLQASRPSAIPMEQNIKLHFEDNSPIIDAAQYRRLVGRLLYLTVTRPDIT 4043
KYTLDI+ E GL ++P P+EQN +L + + + YRRLVGRL+YL VTRPD+
Sbjct: 1198 KYTLDIVSETGLLGAKPCGFPIEQNHRLGLANGELLSNPESYRRLVGRLIYLAVTRPDLA 1257
Query: 4044 FSVNLLSQFISCPRQTHMNAAVRVLRYLKMTPGQGLFLLADGGLSLEAYCDADWGGCQFT 4223
+SV+++SQF+ PR H AA+RV+RYLK TPGQG+ L AD LSL+ +CD+DW C T
Sbjct: 1258 YSVHIISQFMQEPRIEHWEAALRVVRYLKGTPGQGVLLRADSDLSLQGWCDSDWAACPVT 1317
Query: 4224 RRSSTGYFISLGGAPVSWRTKKQSVVARSSAEAEYRAMAATVSELLWLRWMLKDLGAHQH 4403
RRS +G W TKKQ V+RSSAEAEYRAMAA EL WL+ +L LG H
Sbjct: 1318 RRSLSG-----------WLTKKQHTVSRSSAEAEYRAMAAVTCELKWLKGLLLSLGVHHP 1366
Query: 4404 GPTPMFCDNQAARHIAVNPVFHERTKHVEMDCYFVRERVERGDIEPRKISTNLQIADILT 4583
+FCD+Q+A H+A NPVFHERTKH+E+DC+F+R+ + G I + T Q+ADI T
Sbjct: 1367 KAIKLFCDSQSALHMAKNPVFHERTKHIEVDCHFIRDAITDGLIALSYVPTVTQLADIFT 1426
Query: 4584 KALGTVRFRFLRSKLGVRDLHLPT 4655
KAL +F +L +KLG+ + H PT
Sbjct: 1427 KALRKKQFDYLLAKLGIFEPHAPT 1450
>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1427
Score = 1036 bits (2680), Expect = 0.0
Identities = 582/1452 (40%), Positives = 837/1452 (57%), Gaps = 47/1452 (3%)
Frame = +3
Query: 456 MSNALFAKNKIGFVDGTIPMPKPDSPELIYWMRCNAMVKGWLNSAMNKEIRSSVKYAKTA 635
M AL +KNK FVDG+I P+ + W+RCN M+ W+ +++++I SV Y A
Sbjct: 1 MMRALLSKNKFKFVDGSIQEPQKSNELHDAWVRCNTMILSWITKSVSEQIAQSVIYINNA 60
Query: 636 REIWIDLEERFGKESAPRAYELRQALTLLRQEKLSVSAYYTKLRGLWDEIQSVSPTPRCT 815
+ +W DL+ERF K R +L Q + ++Q ++S+Y+T+L+ LW+E++S+ PTP CT
Sbjct: 61 QRLWEDLKERFSKGDYFRFSDLLQEIHSIKQADRTISSYFTELKILWEELESLRPTPTCT 120
Query: 816 CS-GCTCDIQKQLTVMREKEQLYEFLMGLDDSFATVKIQILSTKPILSLGAAYHLVAEDE 992
C C+CD+ ++ ++ E + FL GL+D + TVK QIL P+ + + LV + E
Sbjct: 121 CDVRCSCDLSTKVKDYKDTEYVICFLKGLNDQYNTVKSQILIMDPLPVINKVFSLVLQQE 180
Query: 993 QQRL---IAAARKPSVQA-AAFQIQSKRDDREATDRRYGR--------KEKLRCNHCQKP 1136
+Q+ +A +R S+ + +S + R + R GR C C K
Sbjct: 181 RQQNTPNLADSRIFSLNTQSGGNWRSSSNGRGGSSRGRGRTGGRGSFTNAGKVCTFCGKE 240
Query: 1137 NHTEDQCFEIIGYPPGWRKNVRKGSQQNDQRSGPKVAHVGVETS------PILGLSQDQY 1298
NHT D C+ G+PP ++ + + + S + E S + + Y
Sbjct: 241 NHTIDSCYFKHGFPPNFKFKDKGNTTSINTISSKAPSTQASEISRKQNKESTSNFTHEDY 300
Query: 1299 ARLVQFL------NPDNENSKVAGSTT-------NPTANMAGKINFDKPWVIDSGATEHI 1439
L+ L +P++ +++ TT N N G W++D+GAT+H+
Sbjct: 301 DHLIDMLKRAKLQSPEHSINQLVHQTTTESVSSSNLQQNQPGNPLEHTDWILDTGATDHV 360
Query: 1440 TCDERFLEIGTETGTSLPVKIPNGDTIPVKNVGNARLPNGLKIHRVLNIPTFQCNLLSVS 1619
C+ + + VK+PNG+T + G ++ VL IP F N++SV
Sbjct: 361 -CNSLYFFTKYHPIDPVHVKLPNGNTSTAQFSGTIIFSEKFFLNDVLYIPNFHLNIISVQ 419
Query: 1620 RLTNDFNCALIFFPDFCVMQDLPSRNLIGVGRQFDGLYCLE-PVKNEGMAM--------- 1769
++ + L+F + C++QDL S+ IG+ + LY L+ P K+ ++
Sbjct: 420 KIAASLDYELMFNKNSCIIQDLTSKKTIGLAEVKNHLYILQRPSKDNSISACKSNSVLNA 479
Query: 1770 ---SVTVDPEIWHRRLGHASGAKLQKLPILAKSNNGN-NIICDSCVRAKQTRLPFPSSSI 1937
T ++WH RLGH S LQ + L N NI CD C KQ RLPFP+S+
Sbjct: 480 QPKGTTSSFDLWHYRLGHPSHVVLQTVKRLFPYVTYNKNITCDYCHFGKQARLPFPTSTT 539
Query: 1938 KTNSCFELIHCDIWGSYKTASFSGAHYFLSIVDDYSRGVWIFLMKQKSEVGHILTMFCNM 2117
K+ SCF+L+H DIWG S G YFL+IVDDYSR WI+ MK K E +++ F +
Sbjct: 540 KSLSCFDLVHMDIWGPLAIPSIHGHKYFLTIVDDYSRHTWIYFMKSKGETRNLIQNFISY 599
Query: 2118 VKTQFDKKVKRIRSDNGAEFQSTYMLDYYKEHGIVLETSCTYTPQQNGVVERKHRHILEV 2297
V+TQF K +K +RSDNG EF M Y +GIV +TSC TPQQN VVERKHRHIL +
Sbjct: 600 VQTQFTKHIKVLRSDNGVEFA---MDQLYATYGIVHQTSCVETPQQNSVVERKHRHILNI 656
Query: 2298 ARALRFQENLPIEFWGECVLTAVYIINRLPSRAINDKTQHEILLGKEPVYDHMRVFGCLA 2477
R L F N+P FW V A+++INRLPS +N+ + +++L K P ++VFG L
Sbjct: 657 TRTLLFHSNVPKSFWCYAVGHAIHLINRLPSPVLNNSSPYQMLYDKPPTLLDLKVFGSLC 716
Query: 2478 YAHDNKR-KDKFDERGRPCIFVGYPNGQKGYRVYDLKNREIYTSRDVTFVEHSYPFKEKN 2654
YA + + K + +++G G KG+ V DL R I+ SR+V F EH +PF EK
Sbjct: 717 YASTLVQGRSKLAPKATKGVYLGVKQGTKGFLVLDLLTRSIFVSRNVVFYEHIFPFFEKG 776
Query: 2655 SELGHKINPINGDDAWESATVEAQHEYITGGDSINIDLVENDSQEGTQQELTTMGHEQDD 2834
S + N D ++ +++ +T D+ ++ +++ E ++ H +
Sbjct: 777 STVITNSQQQN-DACFDFLYLDSSSHPVTTIDNSSLLDIDSAHYENDLNDIDESAHPSET 835
Query: 2835 SGPIQELTIAPENEIAHEHHTTPEMKNEIEVRRGQRTRRQPKHLENFVTDMPPSVDHSQP 3014
S P Q +R+ R + P +L+++ ++ V
Sbjct: 836 SSPSQ-------------------------LRKSTRHKCSPAYLKDYHCNLLIGVP---- 866
Query: 3015 TPTSGTSTVYPLSQFVSYNKFSEAHKAFLAAITSRDEPKYFHQAIKDPNWCDAMKKEVDA 3194
P YPL+ +SY+ S ++ ++ +IT+ EP F+QA+K+ W +AM+ E+DA
Sbjct: 867 -PPEDKHIRYPLNTVLSYDSLSASYSRYVLSITTHVEPHTFNQAVKNKVWVEAMQAELDA 925
Query: 3195 LEANGTWKLVHFPQGKRAIDSKWVYKIKYKPNGEIERYKARLVAKGFTQMEGIDFHETFA 3374
LE N TW ++ P GK I SKWVYKIKYK +G IERYKARLV KG+TQ++G+D+ +TFA
Sbjct: 926 LEHNKTWTIMPLPPGKTPIGSKWVYKIKYKSDGSIERYKARLVVKGYTQIQGLDYFDTFA 985
Query: 3375 PVAKLVTVRCLLTVAAKRGWEVHQLDVNNAFLHGDLAEEVYMKIPQGFAKKGEMRVCKLQ 3554
PVAKL TVR LL +A+ + WE+HQLD+NNAFLHGDL E+VYM+IPQG VCKL
Sbjct: 986 PVAKLSTVRMLLAIASCQHWELHQLDINNAFLHGDLLEDVYMEIPQGLNIDKPNHVCKLN 1045
Query: 3555 KSLYGLKQASRNWYQKFTRALLDIGFRQSHADHSLFIFKSDNIHIAALIYVDDVLLAGND 3734
KSLYGLKQASR W+ K + LL + ++QS DHSLF LIYVDD+++AG D
Sbjct: 1046 KSLYGLKQASRQWFAKLSSFLLSLHYKQSQHDHSLFTKHHGTHFTVILIYVDDLIIAGTD 1105
Query: 3735 RERIVNIKSYLDAKFSINDLGPLKYFLGIEVARSSEGFVLSQRKYTLDILEECGLQASRP 3914
E I +IK LD KF I DLGPL+YFLG+E+ARS G LSQRKYTLD+L+E A +P
Sbjct: 1106 SEEINHIKQSLDVKFKIKDLGPLRYFLGLEIARSHLGISLSQRKYTLDLLDETSFLAGKP 1165
Query: 3915 SAIPMEQNIKLHFEDNSPIIDAAQYRRLVGRLLYLTVTRPDITFSVNLLSQFISCPRQTH 4094
P+ + +L +SP D A YRRL+G+LLYL TRPDI++SV LSQF+SCP+Q+H
Sbjct: 1166 VLTPIIKGTRLSHTTDSPYEDPAGYRRLIGKLLYLITTRPDISYSVQQLSQFLSCPQQSH 1225
Query: 4095 MNAAVRVLRYLKMTPGQGLFLLADGGLSLEAYCDADWGGCQFTRRSSTGYFISLGGAPVS 4274
AA+RVLRYLK PGQGLF AD L L+A+ D+DW C TRRS +GY I LG + +S
Sbjct: 1226 YQAAIRVLRYLKGNPGQGLFYPADSPLQLKAFSDSDWASCPDTRRSLSGYSIFLGNSLIS 1285
Query: 4275 WRTKKQSVVARSSAEAEYRAMAATVSELLWLRWMLKDLGAHQHGPTPMFCDNQAARHIAV 4454
W+ KKQS ++RSS+EAEYRA+AAT E+ WL ++L+D P ++CDNQ+ARHIA
Sbjct: 1286 WKCKKQSTISRSSSEAEYRALAATACEIQWLTYLLQDFSVPFTTPALLYCDNQSARHIAS 1345
Query: 4455 NPVFHERTKHVEMDCYFVRERVERGDIEPRKISTNLQIADILTKALGTVRFRFLRSKLGV 4634
N VFHERTKH+E+DC+ VRE+++ G I+++ Q+ADILTK L F++L SKLGV
Sbjct: 1346 NAVFHERTKHIEIDCHLVREKLQAGLFHLLPIASSHQLADILTKPLDPSPFQYLLSKLGV 1405
Query: 4635 RDLHLPT*GGVL 4670
+++ P GVL
Sbjct: 1406 INIYSPACRGVL 1417
>gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1445
Score = 1024 bits (2647), Expect = 0.0
Identities = 589/1484 (39%), Positives = 830/1484 (55%), Gaps = 49/1484 (3%)
Frame = +3
Query: 351 IDVMSPYYIHASDNPGQVYVSELLHDGNYRDWANDMSNALFAKNKIGFVDGTIPMPKPDS 530
++ +P ++H +NP + V+ LL D N+ W +DM AL KNK FV GT+ P
Sbjct: 14 VNPANPLFLHPGENPALILVTPLLSDNNFPQWKHDMLVALETKNKDQFVLGTLTCPNLSD 73
Query: 531 PELIYWMRCNAMVKGWLNSAMNKEIRSSVKYAKTAREIWIDLEERFGKESAPRAYELRQA 710
P W RCN MV WL +M IR SV + ++A EIW DL +RF R +L++
Sbjct: 74 PLHKAWCRCNKMVMSWLAHSMTPSIRQSVMWIESASEIWRDLCDRFSHGDKFRIADLQEE 133
Query: 711 LTLLRQEKLSVSAYYTKLRGLWDEIQSVSPTPRCTCS-GCTCDIQKQLTVMREKEQLYEF 887
L +Q +L+VS YYT+LR LW E+ C+C C+C I ++ R+ + + +F
Sbjct: 134 LQNCKQGELTVSQYYTRLRILWKELSIYRTVLACSCPVACSCGIFSKIQKERDDDCVIKF 193
Query: 888 LMGLDDSFATVKIQILSTKPILSLGAAYHLVAEDEQQ--RLIAAARKPSVQAAAFQIQSK 1061
L GL+D F+ V+ Q++ +P+ L + LV + E++ + + S A F S
Sbjct: 194 LRGLNDEFSQVRSQVMLMEPMPGLTRTFSLVLQQEREFGGPVPPIPQESAALATFNDDSA 253
Query: 1062 RDD--------------REATDRRYGRKEKLRCNHCQKPNHTEDQCFEIIGYPPGWR--- 1190
R++ R GR + C C+K NHT D CF+I G+PPG+R
Sbjct: 254 RNNSSTRGGFSNTRGGGRSGRGNNTGRSTRF-CTKCKKTNHTIDTCFQIYGFPPGYRTNG 312
Query: 1191 ------KNVRKGSQQNDQRSGPKV----AHVGVETSPILGLSQDQYARLVQFLNPDNENS 1340
N K S N + V A V + S+DQY L+ L + S
Sbjct: 313 KSTSTTSNTSKSSVNNFDSTTSLVSATSAKDDVTSQNTFNFSKDQYQALLGLLQQSQDPS 372
Query: 1341 KVAGSTTNPTANMAGKINFDKPWVIDSGATEHITCDERFLEIGTETGTSLPVKIPNGDTI 1520
S + + G F W++DSGAT+HI C + + VK+PN ++
Sbjct: 373 PSVNSAHKCSVSTPGINLFQSSWILDSGATDHI-CPSKSYFSSLIPIKPVSVKLPNNQSV 431
Query: 1521 PVKNVGNARLPNGLKIHRVLNIPTFQCNLLSVSRLTNDFNCALIFFPDFCVMQDLPSRNL 1700
G L N L ++ L +P F +L+S+ +L NC +IF C++ + +
Sbjct: 432 FACYSGTIHLGN-LTLYNALYVPDFSVHLISIPKLVTTLNCIVIFCEYDCIIVQRHTFKM 490
Query: 1701 IGVGRQFDGLYCLEPVKNEGMAMSVTVD-----------------PEIWHRRLGHASGAK 1829
IG +Q GL+ L N+ + S T + +WH +LGH S
Sbjct: 491 IGAAKQQSGLFQLLQ-HNDSLGFSTTGNNCTTVLATTLNDNFSNSTSVWHAKLGHPSNKV 549
Query: 1830 LQKLPILAKSNNGNNI-ICDSCVRAKQTRLPFPSSSIKTNSCFELIHCDIWGSYKTASFS 2006
LQ L S + +CD C AKQ +LPFP S+ TN FELIH DIWG +S
Sbjct: 550 LQTLSSQYTSIKFPLVHVCDICSFAKQKKLPFPDSTSITNFFFELIHVDIWGPLAISSIE 609
Query: 2007 GAHYFLSIVDDYSRGVWIFLMKQKSEVGHILTMFCNMVKTQFDKKVKRIRSDNGAEFQST 2186
G YFL++VDDYSR WI L+K K EV +L F +++ Q D K+KR+RSDNG EF
Sbjct: 610 GYKYFLTVVDDYSRFTWIHLLKSKQEVKSLLPNFIILIENQHDCKLKRLRSDNGKEF--- 666
Query: 2187 YMLDYYKEHGIVLETSCTYTPQQNGVVERKHRHILEVARALRFQENLPIEFWGECVLTAV 2366
+ ++Y GI+ ETSC TPQQNG+VERKH+H+L V RAL FQ +P FW + AV
Sbjct: 667 ILTNFYNAKGILHETSCVETPQQNGIVERKHQHLLNVCRALLFQSQIPKTFWSYAIKHAV 726
Query: 2367 YIINRLPSRAINDKTQHEILLGKEPVYDHMRVFGCLAYAHD-NKRKDKFDERGRPCIFVG 2543
+IINRLP+R + K+ E++ +P +RVFGCLAYA + K R CIF+G
Sbjct: 727 HIINRLPTRFLKQKSPFEMIYHHKPDLHDLRVFGCLAYASTLAAGRTKLAPRASKCIFLG 786
Query: 2544 YPNGQKGYRVYDLKNREIYTSRDVTFVEHSYPFKEKNSELGHKINPINGDDAWESATVEA 2723
Y +G KGY +Y+L +R SR+V F E +P+ + HK + N D +T +
Sbjct: 787 YKSGTKGYVLYNLHSRFFSLSRNVIFHETVFPYSD-----FHKFSS-NSDAILTESTNDF 840
Query: 2724 QHEYITGGDSINIDLVENDSQEGTQQELTTMGHEQDDSGPIQELTIAPENEIAHEHHTTP 2903
H + I ++E + ++L +Q + +Q++ + P
Sbjct: 841 AHY-----ELYPITVLETTNTHTPSEQL-----QQPLTEEMQDIPVQP------------ 878
Query: 2904 EMKNEIEVRRGQRTRRQPKHLENFVTDMPPSVDHSQPTPTSGTSTVYPLSQFVSYNKFSE 3083
R R + +P +L + H +S ++ +YPL ++SYNK S
Sbjct: 879 --------RVSTRQKFRPNYLNQY---------HCYSATSSNSACLYPLHSYLSYNKCSS 921
Query: 3084 AHKAFLAAITSRDEPKYFHQAIKDPNWCDAMKKEVDALEANGTWKLVHFPQGKRAIDSKW 3263
+ AF +I++ EP + QAI W AM E+DAL N TW LV P G++ I KW
Sbjct: 922 NYTAFCLSISAHVEPSNYAQAITQDCWKQAMMTELDALNRNRTWSLVSLPPGRKLIGCKW 981
Query: 3264 VYKIKYKPNGEIERYKARLVAKGFTQMEGIDFHETFAPVAKLVTVRCLLTVAAKRGWEVH 3443
VY+IKYK +G ++R+KARLVAKGFTQ EGID+ ETF+PVAKL TVR LL +A+ W +H
Sbjct: 982 VYRIKYKADGSVDRHKARLVAKGFTQTEGIDYFETFSPVAKLTTVRFLLALASTNNWFLH 1041
Query: 3444 QLDVNNAFLHGDLAEEVYMKIPQGFAKKGEMRVCKLQKSLYGLKQASRNWYQKFTRALLD 3623
QLDV+NAFLHGDL EEVYM+ PQG VCKL+KSLYGLKQASRNW QK LL
Sbjct: 1042 QLDVDNAFLHGDLEEEVYMRPPQGLQLPDSKLVCKLEKSLYGLKQASRNWNQKLNSELLH 1101
Query: 3624 IGFRQSHADHSLFIFKSDNIHIAALIYVDDVLLAGNDRERIVNIKSYLDAKFSINDLGPL 3803
+G++QS ADHSLFI K + L+YVDDV+L+GN+ I +K +L KF I DLGPL
Sbjct: 1102 LGYKQSSADHSLFIKKQGSSITILLVYVDDVVLSGNNFSEIQIVKQHLHQKFQIKDLGPL 1161
Query: 3804 KYFLGIEVARSSEGFVLSQRKYTLDILEECGLQASRPSAIPMEQNIKLHFEDNSPIIDAA 3983
K+FLG+EVARS +G +L+QRKY L++++E GL S+P+ P + IKLH + S + D
Sbjct: 1162 KFFLGLEVARSKKGIILNQRKYCLELIDESGLLGSKPAPTPADPAIKLHADHGSLLNDPT 1221
Query: 3984 QYRRLVGRLLYLTVTRPDITFSVNLLSQFISCPRQTHMNAAVRVLRYLKMTPGQGLFLLA 4163
+RRL+GRLLYLT TRPDI+FSV LSQF+S PR+ H+ AA+R++RYLK PG GLF A
Sbjct: 1222 SFRRLIGRLLYLTNTRPDISFSVQQLSQFVSQPREPHLQAALRIVRYLKGAPGLGLFYPA 1281
Query: 4164 DGGLSLEAYCDADWGGCQFTRRSSTGYFISLGGAPVSWRTKKQSVVARSSAEAEYRAMAA 4343
+ L ++A+ D+DW C TR+S TGY + LG + VSW++KKQS V+RSS+EAEYRA+A+
Sbjct: 1282 ENHLRIQAFSDSDWATCSTTRKSVTGYCVFLGKSLVSWKSKKQSTVSRSSSEAEYRALAS 1341
Query: 4344 TVSELLWLRWMLKDLGAHQHGPTPMFCDNQAARHIAVNPVFHERTKHVEMDCYFVRERVE 4523
EL WL+++ L P +F D+Q+A IA NP FHERTKH+E+DC+ +R +++
Sbjct: 1342 LTCELQWLKFLSDSLFVKIPAPFSVFSDSQSAIQIAKNPTFHERTKHIEVDCHLIRIKLQ 1401
Query: 4524 RGDIEPRKISTNLQIADILTKALGTVRFRFLRSKLGVRDLHLPT 4655
+ + + Q+AD TK+L F SKLG+ ++H PT
Sbjct: 1402 EELLHLIHVPSANQLADAFTKSLYPKLFLHAISKLGLSNIHGPT 1445
>ref|XP_015084421.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
from transposon TNT 1-94 [Solanum pennellii]
Length = 1434
Score = 1014 bits (2622), Expect = 0.0
Identities = 576/1516 (37%), Positives = 849/1516 (56%), Gaps = 81/1516 (5%)
Frame = +3
Query: 351 IDVMSPYYIHASDNPGQVYVS-ELLHDGNYRDWANDMSNALFAKNKIGFVDG--TIPMPK 521
ID P YI SD+ G V + +L NY W+ M AL K K GFV G T + K
Sbjct: 6 IDQSDPLYIGQSDSSGAVLIPIKLTGSENYGVWSRSMRIALLGKRKYGFVTGACTKALYK 65
Query: 522 PDSPELIYWMRCNAMVKGWLNSAMNKEIRSSVKYAKTAREIWIDLEERFGKESAPRAYEL 701
D E W CNA+V WL + +++E+ S + YA TA +W DL+ERF K + R Y+L
Sbjct: 66 DDLHE--QWETCNAIVLSWLMNTVSEELLSGIVYATTAFSVWADLKERFDKVNRMRIYQL 123
Query: 702 RQALTLLRQEKLSVSAYYTKLRGLWDEIQSVSPTPRCTCSGCTCDIQKQLTVMREKEQLY 881
+ +T L Q SVS Y++KL+ LW E +V+P P C+C K+ + +L
Sbjct: 124 HKEITTLTQGTDSVSCYFSKLKTLWSEYDAVTPHPSCSCPQ-----SKEYVDHLHELRLI 178
Query: 882 EFLMGLDDSFATVKIQILSTKPILSLGAAYHLVAEDEQQRLIAAAR---KPSVQAAAFQI 1052
+FL GL+DS+ + QIL SL AY ++ EDE Q A KP+ + +
Sbjct: 179 QFLSGLNDSYDQPRRQILLKGITPSLNQAYAMIIEDEIQHSTCTATAVDKPN--SMVMNV 236
Query: 1053 QSKRDDREATDRRYGRKEKLRCNHCQKPNHTEDQCFEIIGYPPGWR-------------- 1190
+ + G K K +C++C HT D C+++IGYP W+
Sbjct: 237 RRAHGKEVFNQGKEGFKSK-KCDYCHFSGHTRDNCYKLIGYPSDWKFKKKPGYNNKNGGY 295
Query: 1191 --KNVRKGSQQNDQRS--------GPKVAH-------VGVETSPILGLSQD--------- 1292
N GS N S GP +A+ + S + SQ
Sbjct: 296 GDSNTGYGSAGNKNNSDGSNAGYRGPHIANNVAGDINTAYDQSQLASTSQGAGSSAGNDT 355
Query: 1293 -----------QYARLVQFLNPDN-ENSKVAGSTTNPTANMAGKINFDKPWVIDSGATEH 1436
+Y ++++ LN + + + G TT AN +F + W++DSGAT H
Sbjct: 356 CLARAQVFTEKEYKQILEMLNKEEPKRVNMTGITTCLMAN-----SFSQDWIVDSGATHH 410
Query: 1437 ITCDERFLEIGTETGT--SLPVKIPNGDTIPVKNVGNARLPNGLKIHRVLNIPTFQCNLL 1610
+T ++ L E V +P GD + V ++G + + + VL
Sbjct: 411 VTAHKQSLFKSYELNKLQKSQVHLPTGDRVDVNHIGESTIFEDEVVKNVL---------- 460
Query: 1611 SVSRLTNDFNCALIFFPDFCVMQDLPSRNLIGVGRQFDGLYC---------LEPVKNEGM 1763
DL + + G+G++ GLY ++ K M
Sbjct: 461 ----------------------YDLFNGKVKGIGKEQGGLYMFKSGSTLNKIDKHKQHVM 498
Query: 1764 AMSVTV--DPEIWHRRLGHASGAKLQKLPILAKSNNGNNIICDSCVRAKQTRLPFPSSSI 1937
+ T D ++WH+RLGH S ++ L +++ + + C C AKQTR FPSS+
Sbjct: 499 VAAGTSNQDIQLWHQRLGHPSHIIMKHLKLISSNKDDVVTSCPVCPLAKQTRQVFPSSNS 558
Query: 1938 KTNSCFELIHCDIWGSYKTASFSGAHYFLSIVDDYSRGVWIFLMKQKSEVGHILTMFCNM 2117
+ ++ F+L+H D+WG Y ++ HYFL+IVDDYSR VWI+L++ KSE + MF +M
Sbjct: 559 RASTSFDLVHMDLWGPYNISTLDKKHYFLTIVDDYSRFVWIYLLQLKSETVVAIKMFLSM 618
Query: 2118 VKTQFDKKVKRIRSDNGAEFQSTYMLDYYKEHGIVLETSCTYTPQQNGVVERKHRHILEV 2297
+KTQF VK DNG EF ++ + + E GI+ ++SC+YTPQQNGVVERKHR IL +
Sbjct: 619 IKTQFGAHVKVX--DNGTEFFNSQCIKLFHELGILHQSSCSYTPQQNGVVERKHRQILNI 676
Query: 2298 ARALRFQENLPIEFWGECVLTAVYIINRLPSRAINDKTQHEILLGKEPVYDHMRVFGCLA 2477
ARA+RFQ +PI +WG CV AVY++NRLPS +I++K+ +E+L K P DH++V GCL
Sbjct: 677 ARAIRFQSKMPIRYWGYCVKAAVYLMNRLPSSSISNKSPYELLYSKTPTLDHLKVIGCLC 736
Query: 2478 YAHDNKRKDKFDERGRPCIFVGYPNGQKGYRVYDLKNREIYTSRDVTFVEHSYPFKEKNS 2657
YA + DKF ER P I +GY QKGY + D+K++ + SRDV F E+ +PF
Sbjct: 737 YATVMPKGDKFAERAVPTILLGYSELQKGYMLLDIKSKRFFVSRDVVFHENVFPF----- 791
Query: 2658 ELGHKINPINGDDAWESATVEAQHEYITGGDSINIDLVENDSQEGTQQELTTMGHEQDDS 2837
T EA E T +D+++N + + D++
Sbjct: 792 -----------------CTKEAYAEASTDVCGSPLDIIDNALTDCDVEPAKDTETHDDNA 834
Query: 2838 GPIQEL-TIAPENEIAHEHHTTPEMKNEIEVRRGQRTRRQPKHLENFVTDMPPSVDHSQP 3014
G L EN IA E P +RR R ++P ++++
Sbjct: 835 GNANALYDDNAENTIATEAVERPTTS----IRRTSRRIKEPVWMKDY------------- 877
Query: 3015 TPTSGTSTVYPLSQFVSYNKFSEAHKAFLAAITSRDEPKYFHQAIKDPNWCDAMKKEVDA 3194
T +ST +P++ +SY+K + +KAF++ + EPK+FHQA KD W AM++E+ A
Sbjct: 878 TKGKQSSTRHPIANSLSYDKTTSGYKAFVSKFSECIEPKFFHQAAKDDRWIQAMQQEIQA 937
Query: 3195 LEANGTWKLVHFPQGKRAIDSKWVYKIKYKPNGEIERYKARLVAKGFTQMEGIDFHETFA 3374
LE N TW +V P+G + SKW+YKIKYK +G++ER+KARLVAKG++Q EG+D+H+TF+
Sbjct: 938 LEENNTWSIVDLPKGMHTVGSKWIYKIKYKADGQVERFKARLVAKGYSQQEGLDYHDTFS 997
Query: 3375 PVAKLVTVRCLLTVAAKRGWEVHQLDVNNAFLHGDLAEEVYMKIPQGFAKKGEMRVCKLQ 3554
PVAK+VTVRC++ +A +GW ++Q+DV NAFL GDL EEVYM++P+GF K GE +VCKL
Sbjct: 998 PVAKMVTVRCVIALAVSKGWPMYQMDVYNAFLQGDLEEEVYMEMPEGFRKPGENKVCKLL 1057
Query: 3555 KSLYGLKQASRNWYQKFTRALLDIGFRQSHADHSLFIFKSDNIHIAALIYVDDVLLAGND 3734
KSLYGLKQASR W K + AL+ GF QS D+SLF K D + L+YVDD+L+ G++
Sbjct: 1058 KSLYGLKQASRQWNLKLSNALVAAGFSQSGYDYSLFTLKKDADIVIVLVYVDDLLITGSN 1117
Query: 3735 RERIVNIKSYLDAKFSINDLGPLKYFLGIEVARSSEGFVLSQRKYTLDILEECGLQASRP 3914
+ I K L +F + DLG L++FLGIEV RS+EG +L+QRKY L+++ E GL ++P
Sbjct: 1118 TKMINEAKENLHKQFKMKDLGELRFFLGIEVLRSAEGVILNQRKYVLELISEAGLTGAKP 1177
Query: 3915 SAIPMEQNIKL---------HFEDNSPIIDAAQYRRLVGRLLYLTVTRPDITFSVNLLSQ 4067
S P+E N++L + ++ + D Y+R++G+LLY T+TRPDI+++V +LSQ
Sbjct: 1178 STTPIESNLRLTSVEYDQANGYTEDVILQDVTAYQRVIGKLLYATITRPDISYAVQVLSQ 1237
Query: 4068 FISCPRQTHMNAAVRVLRYLKMTPGQGLFLLADGGLSLEAYCDADWGGCQFTRRSSTGYF 4247
F+ P+++H +AA+RV++YLK T GQG++L + L +CD+DW C TRRS TGY
Sbjct: 1238 FMQAPKRSHWDAAMRVIKYLKGTVGQGIWLQSKPANELSCWCDSDWAACPNTRRSITGYV 1297
Query: 4248 ISLGGAPVSWRTKKQSVVARSSAEAEYRAMAATVSELLWLRWMLKDLGAHQHGPTPMFCD 4427
+ G + VSW++KKQ V+RSSAEAEYR+MA+ VSE+ WL + DLG H P +F D
Sbjct: 1298 VKFGESLVSWKSKKQQTVSRSSAEAEYRSMASAVSEVTWLLGLFTDLGVTIHMPILVFSD 1357
Query: 4428 NQAARHIAVNPVFHERTKHVEMDCYFVRERVERGDIEPRKISTNLQIADILTKALGTVRF 4607
+++A +A NPVFHERTKH+E+DC+F+R++++ I + T Q+AD+LTK L +
Sbjct: 1358 SKSAIQLAANPVFHERTKHIEIDCHFIRDKIKAKVISTVHVHTQQQLADLLTKGLNRTQH 1417
Query: 4608 RFLRSKLGVRDLHLPT 4655
+L KLGV ++ P+
Sbjct: 1418 SYLLGKLGVLNILHPS 1433
>gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1346
Score = 1002 bits (2591), Expect = 0.0
Identities = 576/1423 (40%), Positives = 790/1423 (55%), Gaps = 32/1423 (2%)
Frame = +3
Query: 420 LHDGNYRDWANDMSNALFAKNKIGFVDGTIPMPKPD-SPELIYWMRCNAMVKGWLNSAMN 596
L NY WA + AL AK K F+DGTIPMP P W RCN ++ W+ +++
Sbjct: 1 LDGSNYHSWARSLRRALGAKLKFEFLDGTIPMPVDAFDPSFRAWNRCNMLIHSWILNSVE 60
Query: 597 KEIRSSVKYAKTAREIWIDLEERFGKESAPRAYELRQALTLLRQEKLSVSAYYTKLRGLW 776
I S+ + A ++W+DL+ERF + R E++Q + L Q SV+ +Y+ L+ LW
Sbjct: 61 PSISRSIVFMDNASDVWLDLKERFSQGDLVRVSEIQQEIYALTQGTRSVTTFYSDLKALW 120
Query: 777 DEIQSVSPTPRCTCSG-CTCDIQKQLTVMREKEQLYEFLMGLDDSFATVKIQILSTKPIL 953
+E++ P P CTC C+CD + + FL GL+D F VK QIL +P+
Sbjct: 121 EELEIYMPIPNCTCHHRCSCDAMRLARRHHHTLHVMRFLTGLNDEFNAVKSQILLIEPLP 180
Query: 954 SLGAAYHLVAEDEQQRLIAAA--RKPSVQAAAFQIQSKRDDREAT-DRRYGRKEKLRCNH 1124
S+ + +V + E+Q + K V A+ + Q + R + +RY C +
Sbjct: 181 SITKIFSMVIQFERQNCVPNLDDSKALVNASTSKSQGSANGRSNSGSKRY-------CTY 233
Query: 1125 CQKPNHTEDQCFEIIGYPPGWRKNVRKGSQQNDQRSGPKVAHVGVETSPILGLSQDQYAR 1304
C K NH + CF+ G PP KN GS + A G E + + +S Y+
Sbjct: 234 CHKTNHFVENCFQKHGVPPHMMKN-HSGSAHHS-------AVDGGEHTKGMKISHFFYSS 285
Query: 1305 LVQFLNPDNENSKVAGSTTNPTANMAGKINFDKPWVIDSGATEHITCDERFLEIGTETGT 1484
+ + D W+IDSGA+ HI + +E
Sbjct: 286 ICNNIALDT-------------------------WIIDSGASHHICASLHWFHSYSEINP 320
Query: 1485 SLPVKIPNGDTIPVKNVGNARLPNGLKIHRVLNIPTFQCNLLSVSRLTNDFNCALIFFPD 1664
+ +K+PNG+ + K G + I VL +PTF NL+SVS+L + L F
Sbjct: 321 MI-IKLPNGNHVTTKYAGTVVFSSSFSITNVLYVPTFTVNLISVSQLCHHTPYTLNFTDT 379
Query: 1665 FCVMQDLPSRNLIGVGRQFDGLYCLEPVKNEGMAMSVTVD-----------PE--IWHRR 1805
C +Q+ S +IG+G DGLY L E + + + PE IWH R
Sbjct: 380 ICSIQEQKSLKMIGLGESRDGLYYLTQTNKECASSNYNISSIFSSANNVHIPENAIWHFR 439
Query: 1806 LGHASGAKLQKL----PILAKSNNGNNIICDSCVRAKQTRLPFPSSSIKTNSCFELIHCD 1973
LGH S +++ L P + N ++ +CD C AK +LPF S K CF+LIH D
Sbjct: 440 LGHLSSSRIALLHSQFPFIV---NDSSSVCDICHFAKHRKLPFVHSYHKAIKCFDLIHFD 496
Query: 1974 IWGSYKTASFSGAHYFLSIVDDYSRGVWIFLMKQKSEVGHILTMFCNMVKTQFDKKVKRI 2153
IWG S YFL+ VDD+SR WI LMK KSE + F + +KTQ++ VK I
Sbjct: 497 IWGPISIKSVHNHAYFLTAVDDHSRYTWITLMKNKSEARLHVQNFIHFIKTQYNHSVKSI 556
Query: 2154 RSDNGAEFQSTYMLDYYKEHGIVLETSCTYTPQQNGVVERKHRHILEVARALRFQENLPI 2333
R+DNG EF M D+Y GI+ +TSC +PQQNG VERKH+ IL + RAL Q NLP
Sbjct: 557 RTDNGPEF---LMPDFYASKGILHQTSCVDSPQQNGRVERKHQQILNIGRALLVQSNLPK 613
Query: 2334 EFWGECVLTAVYIINRLPSRAINDKTQHEILLGKEPVYDHMRVFGCLAYAHD-NKRKDKF 2510
FW V AVYI+NR+P+ + +K+ + +L P +D ++VFG L +A + K
Sbjct: 614 SFWCYAVSHAVYIMNRVPAPNLQNKSPYTLLYNTAPDFDTLKVFGSLVFASTLQSHRTKL 673
Query: 2511 DERGRPCIFVGYPNGQKGYRVYDLKNREIYTSRDVTFVEHSYPFKEKNSELG---HKINP 2681
D R R C+F+GY +G KG + DL N I+ SRDVT EH +P++ + + H I+P
Sbjct: 674 DLRARKCVFLGYKSGVKGVVLLDLLNNSIFLSRDVTHHEHIFPYQSSSPKTPWEYHSISP 733
Query: 2682 INGDDAWESATVEAQHEYITGGDSINIDLVENDSQEGTQQELTTMGHEQDDSGPIQELT- 2858
D IT I++D+ EQ S P L+
Sbjct: 734 TPNDSD------------ITLDSDISLDI----------------NAEQSPSPPHSSLSP 765
Query: 2859 -IAPENEIAHEHHTTPEMKNEIEV----RRGQRTRRQPKHLENFVTDMPPSVDHSQPTPT 3023
I+ + I+ +TP K+ + + R RR P HL ++V H + T
Sbjct: 766 NISNDTVISDTSTSTPPPKDHNDSPLLHSKPIRQRRAPLHLSDYVCHNTSPTSHE--SLT 823
Query: 3024 SGTSTVYPLSQFVSYNKFSEAHKAFLAAITSRDEPKYFHQAIKDPNWCDAMKKEVDALEA 3203
SGT + YPLS F S S +HKAF +IT EP+ + +A K +W AMK+E++AL
Sbjct: 824 SGTKSKYPLSSFHSLTLLSPSHKAFSMSITHCTEPQSYEEASKHEHWVTAMKEELNALAK 883
Query: 3204 NGTWKLVHFPQGKRAIDSKWVYKIKYKPNGEIERYKARLVAKGFTQMEGIDFHETFAPVA 3383
N TWK+V P + I KWVYK+K+K NG+IERYKARLVAKG+ Q+EGID+ ETF+PVA
Sbjct: 884 NCTWKIVELPPHTKPIGCKWVYKVKHKANGQIERYKARLVAKGYNQVEGIDYFETFSPVA 943
Query: 3384 KLVTVRCLLTVAAKRGWEVHQLDVNNAFLHGDLAEEVYMKIPQGFAKKGEMRVCKLQKSL 3563
K+ TVR LL VAA + W +HQLDVNNAFLHGDL E+VYMKIP G VCKLQKSL
Sbjct: 944 KITTVRTLLAVAAIKNWHLHQLDVNNAFLHGDLQEDVYMKIPDGVTCAKPNSVCKLQKSL 1003
Query: 3564 YGLKQASRNWYQKFTRALLDIGFRQSHADHSLFIFKSDNIHIAALIYVDDVLLAGNDRER 3743
YGLKQASR WY+K T LL G+ QS +D+SLF N A L+YVDD++LAG+ +
Sbjct: 1004 YGLKQASRKWYEKLTNLLLKEGYIQSISDYSLFTLTKGNTFTALLVYVDDIILAGDSIDE 1063
Query: 3744 IVNIKSYLDAKFSINDLGPLKYFLGIEVARSSEGFVLSQRKYTLDILEECGLQASRPSAI 3923
IK+ LD F I +LG LKYFLG+EVA S G +SQRKY LD+L++ GL +P++
Sbjct: 1064 FDRIKNVLDLAFKIKNLGKLKYFLGLEVAHSRLGITISQRKYCLDLLKDSGLLGCKPAST 1123
Query: 3924 PMEQNIKLHFEDNSPIIDAAQYRRLVGRLLYLTVTRPDITFSVNLLSQFISCPRQTHMNA 4103
P++ +IKLH +P D + YRR+VG+LLYL TRPDI F+ LSQF+ P H NA
Sbjct: 1124 PLDTSIKLHSAAGTPYADISGYRRIVGKLLYLNTTRPDIAFATQQLSQFMQAPTNVHFNA 1183
Query: 4104 AVRVLRYLKMTPGQGLFLLADGGLSLEAYCDADWGGCQFTRRSSTGYFISLGGAPVSWRT 4283
A RVLRYLK PGQG+F + L Y DADW GC +R+S +GY +G + VSWR
Sbjct: 1184 ACRVLRYLKNNPGQGIFFSRTSEMQLIGYSDADWAGCMDSRKSISGYCFFIGKSLVSWRA 1243
Query: 4284 KKQSVVARSSAEAEYRAMAATVSELLWLRWMLKDLGAHQHGPTPMFCDNQAARHIAVNPV 4463
KKQ+ V+RSS+EAEYRA+++ EL WL ++ DL ++CDNQ+A HIA NPV
Sbjct: 1244 KKQATVSRSSSEAEYRALSSAACELQWLLYLFADLRVQLTRTPTLYCDNQSAVHIASNPV 1303
Query: 4464 FHERTKHVEMDCYFVRERVERGDIEPRKISTNLQIADILTKAL 4592
FHERTKH+E+DC+ VRE++ +G ++ +ST+ Q+AD LTKAL
Sbjct: 1304 FHERTKHLEIDCHLVREKLLKGTLKLLPVSTSDQVADFLTKAL 1346
>gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1311
Score = 999 bits (2582), Expect = 0.0
Identities = 570/1420 (40%), Positives = 804/1420 (56%), Gaps = 16/1420 (1%)
Frame = +3
Query: 420 LHDGNYRDWANDMSNALFAKNKIGFVDGTIPMPKPDSPELIYWMRCNAMVKGWLNSAMNK 599
L NY W+ M AL AKNK+ FVDG+ P P W RCN MV W+ ++
Sbjct: 1 LDSTNYHSWSRSMIIALSAKNKLEFVDGSAPEPLKTDRTYGAWRRCNNMVLSWIVHSVAA 60
Query: 600 EIRSSVKYAKTAREIWIDLEERFGKESAPRAYELRQALTLLRQEKLSVSAYYTKLRGLWD 779
IR S+ + A +IW DL+ R+ + R +L+Q + LRQ LSV+ Y+T+LR +WD
Sbjct: 61 SIRQSILWMDKAEDIWRDLKTRYSQGDLLRISDLQQEASTLRQGTLSVTEYFTRLRVIWD 120
Query: 780 EIQSVSPTPRCTCS-GCTCDIQKQLTVMREKEQLYEFLMGLDDSFATVKIQILSTKPILS 956
EI++ P P CTC+ C+C + + +++ +FL GL+D + ++ +L PI +
Sbjct: 121 EIENFRPDPACTCNVRCSCSAFAIIAQRKLEDRAMQFLRGLNDQYTNIRSHVLLMDPIPA 180
Query: 957 LGAAYHLVAEDEQQRLIAAARKPSVQAAAFQIQSKRDDREATDRRYGRKEKLRCNHCQKP 1136
+ + VA+ E+Q L ++ + + I + K CN+C +
Sbjct: 181 ITKIFSYVAQQERQLLGNSSPNLNFEPKDVSINAA---------------KTICNYCGRI 225
Query: 1137 NHTEDQCFEIIGYPPGWRKNVRKGSQQNDQRSGPKVAHVGVETSPILGLSQDQYARLVQF 1316
HTE+ C++ G P
Sbjct: 226 GHTENICYKKHGMP---------------------------------------------- 239
Query: 1317 LNPDNENSKVAGSTTNPTANMAGKI-NFDKPWVIDSGATEHITCDERFLEIGTETGTSLP 1493
LN + N G++ + G +F PW++DS AT+H+TC L E +P
Sbjct: 240 LNHETRNK---GTSGRKSCTHCGTFQSFTSPWILDSRATDHVTCSLSNLH-SYECINPVP 295
Query: 1494 VKIPNGDTIPVKNVGNARLPNGLKIHRVLNIPTFQCNLLSVSRLTNDFNCALIFFPDFCV 1673
VK+PNG + + G L + + VL +P F NL+S+S+L + +CALIF C+
Sbjct: 296 VKLPNGHQVHATHSGIVHLSKSITLFNVLYMPAFTFNLISISKLVSSTHCALIFSSTSCM 355
Query: 1674 MQDLPSRNLIGVGRQFDGLYCLEPVKNEGMAMSVTVDP-------EIWHRRLGHASGAKL 1832
+QD +R IG+ + GLY L P + + S + P ++WH R+GH S +L
Sbjct: 356 LQDASTRTKIGIVEEKHGLYHLIPDQVNKVICSTIIHPKCKIIPIDLWHFRMGHLSTERL 415
Query: 1833 QKL----PILAKSNNGNNIICDSCVRAKQTRLPFPSSSIKTNSCFELIHCDIWGSYKTAS 2000
Q + PIL N +C++C AK +LPF SS+ + F L+H DIWG S
Sbjct: 416 QCMKPHYPIL---RNDKTFVCNTCHYAKHKKLPFSSSTSHASHIFYLLHVDIWGPCSKPS 472
Query: 2001 FSGAHYFLSIVDDYSRGVWIFLMKQKSEVGHILTMFCNMVKTQFDKKVKRIRSDNGAEFQ 2180
G YFL+IVDD+SR W+ LM K+E I+ F V+TQ++KK+K+IRSDNG EF
Sbjct: 473 MHGHKYFLTIVDDHSRFTWVHLMHTKAETRDIIVNFIASVETQYNKKIKKIRSDNGYEF- 531
Query: 2181 STYMLDYYKEHGIVLETSCTYTPQQNGVVERKHRHILEVARALRFQENLPIEFWGECVLT 2360
M +Y GI+ +T+C TP+QNG+ ERKH+H+L V RAL FQ NLP FW +L
Sbjct: 532 --LMPSFYASKGIMHQTTCVETPEQNGIAERKHQHLLNVTRALLFQANLPSNFWCYALLH 589
Query: 2361 AVYIINRLPSRAINDKTQHEILLGKEPVYDHMRVFGCLAYAHDNK-RKDKFDERGRPCIF 2537
A Y++N +P+ +++ + +E L G P H+RVFGCL YA K + K D R PCIF
Sbjct: 590 ATYLVNCIPTPFLHNVSPYEKLHGHLPEISHLRVFGCLCYASTLKANRKKLDPRAHPCIF 649
Query: 2538 VGYPNGQKGYRVYDLKNREIYTSRDVTFVEHSYPFKEKNSELGHKINPINGDDAWESATV 2717
+G+ KGY VY+L I TSR+V F E + + ++ H ES+T+
Sbjct: 650 IGFKASTKGYLVYNLHLHSIITSRNVVFYEDHFS-QIPETQSSHP----------ESSTI 698
Query: 2718 EAQHEYITGGDSINIDLVENDSQEGTQQELTTMGHEQDDSGPIQELTIAPENEIAHEHHT 2897
+ I+ D I +E Q Q E D P+Q LT E+ +
Sbjct: 699 LPKSFNISPHDPI----IEKPPQPVIQ--------ETTDHTPLQ-LTSTDESAFSQ---- 741
Query: 2898 TPEMKNEIEVRRGQRTRRQPKHLENFVTDMPPSVDHSQPTPTSGTSTVYPLSQFVSYNKF 3077
+ + E RR R PKH ++ D S+ S T S TS+ YPLS +SY++
Sbjct: 742 ----RTKHEPRRSTR----PKHAPTYLQDYHHSLS-SHDTKVS-TSSRYPLSSVLSYSRL 791
Query: 3078 SEAHKAFLAAITSRDEPKYFHQAIKDPNWCDAMKKEVDALEANGTWKLVHFPQGKRAIDS 3257
S HK F+ +I+S EP + +A + W AM+ E+ AL++N TWKL P K AI
Sbjct: 792 SHTHKHFVMSISSTVEPSSYAEASQYDCWIKAMEAELQALQSNNTWKLTLLPPHKTAIGC 851
Query: 3258 KWVYKIKYKPNGEIERYKARLVAKGFTQMEGIDFHETFAPVAKLVTVRCLLTVAAKRGWE 3437
+WVYKIK++ +G IERYKARLVAKG+TQMEG+D+ F+PVAKL VR LL + A W
Sbjct: 852 RWVYKIKHRADGSIERYKARLVAKGYTQMEGLDYLYAFSPVAKLTIVRLLLAMVAFNQWH 911
Query: 3438 VHQLDVNNAFLHGDLAEEVYMKIPQGFAKKGEMRVCKLQKSLYGLKQASRNWYQKFTRAL 3617
+ QLDVNNAFLHG+L EEVYM++P G + VC+LQ+SLY LKQASR W+ K + L
Sbjct: 912 LRQLDVNNAFLHGELDEEVYMQVPPGLSVPNSQMVCRLQRSLYELKQASRQWFTKLSGLL 971
Query: 3618 LDIGFRQSHADHSLFIFKSDNIHIAALIYVDDVLLAGNDRERIVNIKSYLDAKFSINDLG 3797
+ +GF +SH+DHSLF+ + +I A L+YVDD++L GN I ++ LD F I DLG
Sbjct: 972 ISLGFEKSHSDHSLFLRFTGSIITALLVYVDDIILTGNSESEIQDVIKLLDQAFKIKDLG 1031
Query: 3798 PLKYFLGIEVARSSEGFVLSQRKYTLDILEECGLQASRPSAIPMEQNIKLHFEDNSPIID 3977
LKYFLG+E+ARSS G L QRKYTLDIL + G+ +P+ PM+ + KL +P+
Sbjct: 1032 NLKYFLGMEIARSSSGIHLCQRKYTLDILSDSGMLGCQPNVTPMDYSTKLQATAGTPLST 1091
Query: 3978 AA--QYRRLVGRLLYLTVTRPDITFSVNLLSQFISCPRQTHMNAAVRVLRYLKMTPGQGL 4151
A YRRL+GRL+YLT TRPDIT++V LSQ++S P H AA R+LRYLK T G G+
Sbjct: 1092 EASSSYRRLIGRLIYLTNTRPDITYAVQQLSQYMSNPTSVHQQAAYRILRYLKGTSGSGI 1151
Query: 4152 FLLADGGLSLEAYCDADWGGCQFTRRSSTGYFISLGGAPVSWRTKKQSVVARSSAEAEYR 4331
FL A G L A+ D+DW GCQ +R+S+TG+ I LG +PVSW++KKQS V+RSS+EAEYR
Sbjct: 1152 FLSATGTPQLRAFSDSDWAGCQDSRKSTTGFVIYLGSSPVSWQSKKQSTVSRSSSEAEYR 1211
Query: 4332 AMAATVSELLWLRWMLKDLGAHQHGPTPMFCDNQAARHIAVNPVFHERTKHVEMDCYFVR 4511
AMA T EL WL ++L+D + P ++CDNQ+A IA NPVFHERTKH+E+DC+ VR
Sbjct: 1212 AMATTTCELQWLTYLLQDFRHNFTKPATIYCDNQSAIQIATNPVFHERTKHIEIDCHIVR 1271
Query: 4512 ERVERGDIEPRKISTNLQIADILTKALGTVRFRFLRSKLG 4631
++V G ++ + ++LQ+ADI TKAL F+ L +KLG
Sbjct: 1272 QKVTSGLLKLLPVPSSLQLADIFTKALPPTVFQNLCNKLG 1311
>gb|KYP77073.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1069
Score = 994 bits (2569), Expect = 0.0
Identities = 516/1079 (47%), Positives = 698/1079 (64%), Gaps = 25/1079 (2%)
Frame = +3
Query: 1491 PVKIPNGDTIPVKNVGNARLPNGLKIHRVLNIPTFQCNLLSVSRLTNDFNCALIFFPDFC 1670
PV++P+G + G L GLK+ VL +PT CNLLS+S+LTN+ NC + F + C
Sbjct: 18 PVRLPDGKQLMANKEGTVTLDGGLKVENVLYVPTLSCNLLSISQLTNETNCVVYFTNNLC 77
Query: 1671 VMQDLPSRNLIGVGRQFDGLYCLEPVKNE-GMAMSVTVDPEIWHRRLGHASGAKLQKLPI 1847
VMQD S+ LIGVG Q DGLY + +++E + T + +WH+R+GH S K+ KL
Sbjct: 78 VMQDCTSKMLIGVGEQRDGLYFFKGIRSEKAHKANGTCELNLWHQRMGHPS-FKVTKLAS 136
Query: 1848 LAKSNNG--NNIICDSCVRAKQTRLPFPSSSIKTNSCFELIHCDIWGSYKTASFSGAHYF 2021
+ +N N CD C+RAKQTR FP S+ + FELIHCD+WG Y+T S GA YF
Sbjct: 137 NMRCDNSILKNKPCDVCLRAKQTRDVFPLSTNNASDSFELIHCDLWGPYRTPSSCGASYF 196
Query: 2022 LSIVDDYSRGVWIFLMKQKSEVGHILTMFCNMVKTQFDKKVKRIRSDNGAEFQSTYMLDY 2201
L+I+DD+SR +WI+L+ K EV L F +++ QF K++K +RSDNG EF T + +Y
Sbjct: 197 LTIMDDFSRAIWIYLISDKREVSRTLLNFFALIERQFGKQIKVLRSDNGTEF--TCLRNY 254
Query: 2202 YKEHGIVLETSCTYTPQQNGVVERKHRHILEVARALRFQENLPIEFWGECVLTAVYIINR 2381
+ EHGIV +TSC TPQQNG VERKHRHIL VARALRFQ NLPI FWGECVL A Y+INR
Sbjct: 255 FHEHGIVFQTSCPGTPQQNGRVERKHRHILNVARALRFQGNLPISFWGECVLIAGYLINR 314
Query: 2382 LPSRAINDKTQHEILLGKEPVYDHMRVFGCLAYAHD-NKRKDKFDERGRPCIFVGYPNGQ 2558
P+ ++ KT +E+L G+ P+Y+H++VFGCL YAH+ ++ D F R R CIFVGYP G+
Sbjct: 315 TPTPVLSGKTPYEMLYGQAPMYEHLKVFGCLCYAHNLDRHGDMFASRSRKCIFVGYPYGK 374
Query: 2559 KGYRVYDLKNREIYTSRDVTFVEHSYPFKEKNSELGHKINPINGDDAWESATVEAQHEYI 2738
KG++++DL + + S DV F E +PF + TV +++
Sbjct: 375 KGWKLFDLDTQCYFVSHDVEFFETEFPF---------------------TPTVGVKYDLF 413
Query: 2739 TGGDSINIDLV---ENDSQEGTQQELTTMGHEQDDSGPIQELTIAPENEIAHE-----HH 2894
+N L +ND T+ T+ +E ++E T+A ++E + E ++
Sbjct: 414 VDSSLMNDTLDYDDDNDLDNDTRMGENTL-NEVVVGSEVREGTVALDSERSDELVEEGNN 472
Query: 2895 TTPEMKNEIEVR--------RGQRTRRQPKHLENFVTDMPPSVDHSQPTPTSGTS----- 3035
TP + + VR RG RT+ L +VT ++ P+P+ TS
Sbjct: 473 PTPNVDSLELVRQSSLEELGRGHRTKLPSVKLREYVTH---TIKKLSPSPSQSTSQYSSG 529
Query: 3036 TVYPLSQFVSYNKFSEAHKAFLAAITSRDEPKYFHQAIKDPNWCDAMKKEVDALEANGTW 3215
T YP+S ++S FSE H F+AAIT EP ++ +A++D W AM++E+ ALEANGTW
Sbjct: 530 TPYPISHYISCENFSEKHCRFVAAITLAQEPIHYAEAVQDAKWRLAMQQELHALEANGTW 589
Query: 3216 KLVHFPQGKRAIDSKWVYKIKYKPNGEIERYKARLVAKGFTQMEGIDFHETFAPVAKLVT 3395
L P GK+ + KWVYKIK+ +G IERYKARLV G Q EG+D+ ETFAPV K+VT
Sbjct: 590 SLETLPDGKKPLGCKWVYKIKHNSDGTIERYKARLVILGNHQKEGVDYTETFAPVVKMVT 649
Query: 3396 VRCLLTVAAKRGWEVHQLDVNNAFLHGDLAEEVYMKIPQGFAKKGEMRVCKLQKSLYGLK 3575
VR +L VAA + WE+HQ+DV+NAFLHGDL E+VYMK+P GF VCKL+KSLYGLK
Sbjct: 650 VRLVLAVAATKKWELHQMDVHNAFLHGDLHEDVYMKLPPGFHASQPNHVCKLKKSLYGLK 709
Query: 3576 QASRNWYQKFTRALLDIGFRQSHADHSLFIFKSDNIHIAALIYVDDVLLAGNDRERIVNI 3755
QA R W+ K + AL++ GFRQS DHSLF + + + L+YVDD+++ GND I
Sbjct: 710 QAPRCWFAKLSSALINFGFRQSGCDHSLFTLLAHGVQMMVLVYVDDLIICGNDSAAIQRF 769
Query: 3756 KSYLDAKFSINDLGPLKYFLGIEVARSSEGFVLSQRKYTLDILEECGLQASRPSAIPMEQ 3935
K YL F + DLG LKYFLG+EVAR+S G L QRKY LDI++E GL ++P A P+EQ
Sbjct: 770 KEYLSKCFHMKDLGHLKYFLGVEVARNSSGIFLCQRKYALDIIQEAGLLGAQPVATPLEQ 829
Query: 3936 NIKLHFEDNSPIIDAAQYRRLVGRLLYLTVTRPDITFSVNLLSQFISCPRQTHMNAAVRV 4115
N +L I +YRRLVGRL+YL TRP++++ V+ LSQF+ PR+ H NAA+R+
Sbjct: 830 NHQLGLATGRYIDQPDRYRRLVGRLIYLCFTRPELSYCVHTLSQFMQQPREEHWNAAIRI 889
Query: 4116 LRYLKMTPGQGLFLLADGGLSLEAYCDADWGGCQFTRRSSTGYFISLGGAPVSWRTKKQS 4295
+RYLK +PGQG+ L + L +CD+DW GC TRRS+TG+F+ LG +P+SW+TKKQ
Sbjct: 890 VRYLKGSPGQGILLKSTSDFQLHGWCDSDWAGCPLTRRSTTGWFLFLGHSPISWKTKKQY 949
Query: 4296 VVARSSAEAEYRAMAATVSELLWLRWMLKDLGAHQHGPTPMFCDNQAARHIAVNPVFHER 4475
V+RSSAEAEYR+MA T EL WLR +L DLG GP + CD+QAA HIA NPVFHER
Sbjct: 950 TVSRSSAEAEYRSMATTCCELKWLRSLLADLGISHKGPMHLHCDSQAALHIAKNPVFHER 1009
Query: 4476 TKHVEMDCYFVRERVERGDIEPRKISTNLQIADILTKALGTVRFRFLRSKLGVRDLHLP 4652
TK++E+DC+F+R + +G I+P + T Q+ADILTK LG +F+ L +KLG+ + H P
Sbjct: 1010 TKYIEVDCHFIRNEILQGTIQPSYVPTQEQLADILTKVLGRHQFQTLLNKLGICNPHAP 1068
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 992 bits (2564), Expect = 0.0
Identities = 582/1505 (38%), Positives = 815/1505 (54%), Gaps = 52/1505 (3%)
Frame = +3
Query: 297 MSKSDETKAEVFPVQSSGIDV--MSPYYIHASDNPGQVYVSELLHDGNYRDWANDMSNAL 470
MS +E + P + DV +SPY + +SDNPG + S +L NY +W+ M NAL
Sbjct: 1 MSIPEEVSSATHPRTNQQPDVTKVSPYTLASSDNPGAMISSVMLTGDNYNEWSTKMLNAL 60
Query: 471 FAKNKIGFVDGTIPMPKPDSPELIYWMRCNAMVKGWLNSAMNKEIRSSVKYAKTAREIWI 650
AK K GF++G+I P D+P+ W N+M+ GW+ +++ +++S+V + A ++W
Sbjct: 61 QAKRKTGFINGSISKPPLDNPDYENWQAVNSMIVGWIRASIEPKVKSTVTFICDAHQLWS 120
Query: 651 DLEERFGKESAPRAYELRQALTLLRQEKLSVSAYYTKLRGLWDEIQSVSPTPRCTCSGCT 830
+L++RF + ++++ L RQ+ V YY +L LW+E Q P C C CT
Sbjct: 121 ELKQRFSVGNKVHVHQIKTQLAACRQDGQPVIDYYGRLCKLWEEFQIYKPITVCKCGLCT 180
Query: 831 CDIQKQLTVMREKEQLYEFLMGLDDS-FATVKIQILSTKPILSLGAAYHLVAEDEQQRLI 1007
C + + RE+E++++F++GLDDS F + +++ P SLG Y V +EQ+
Sbjct: 181 CGATLEPSKEREEEKIHQFVLGLDDSRFGGLSATLIAMDPFPSLGEIYSRVVREEQRLAS 240
Query: 1008 AAARKPSVQAAAF---QIQSKRDDREATDRRYGRKEKLRCNHCQKPNHTEDQCFEIIGYP 1178
R+ A F Q + D R + R + C+HC + H + C++I+G+P
Sbjct: 241 VQIREQQQSAIGFLTRQSEVTADGRTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFP 300
Query: 1179 PGWRKNVRKGSQQNDQR------SGPK----------VAHVGVET-SPILGLSQDQYARL 1307
W + G + + R SG AH SP + DQ +
Sbjct: 301 DWWTERTNGGGRGSSSRGRGGRSSGSNNSGRGRGQVTAAHATTSNLSPFPEFTPDQLRVI 360
Query: 1308 VQFLNPDNENSKVAGSTTNPTANMAGKINFDKPWVIDSGATEHITCDERFLEIGTETGTS 1487
Q + N + + ++GK+ ++D+GA+ H+T + L T S
Sbjct: 361 TQMIQNKNNGT---------SDKLSGKMKLGDV-ILDTGASHHMT-GQLSLLTNIVTIPS 409
Query: 1488 LPVKIPNGDTIPVKNVGNARLPNGLKIHRVLNIPTFQCNLLSVSRLTNDFNCALIFFPDF 1667
V +G ++G +L + + VL +P C+L+SVS+L C +F
Sbjct: 410 CSVGFADGRKTFAISMGTFKLSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTI 469
Query: 1668 CVMQDLPSRNLIGVGRQFDGLYCLEPVKNEGM-AMSVTVDPEIWHRRLGHASGAKLQKLP 1844
CV+QD SR LIG G + DG+Y L + + +T D +WH+RLGH S + L LP
Sbjct: 470 CVLQDRFSRTLIGTGEERDGVYYLTDAATTTVHKVDITTDHALWHQRLGHPSFSVLSSLP 529
Query: 1845 ILAKSN-NGNNIICDSCVRAKQTRLPFPSSSIKTNSCFELIHCDIWGSYKTASFSGAHYF 2021
+ + S+ + ++ CD C RAKQTR FP SS K+ CF LIHCD+WG Y+ S GA YF
Sbjct: 530 LFSGSSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYF 589
Query: 2022 LSIVDDYSRGVWIFLMKQKSEVGHILTMFCNMVKTQFDKKVKRIRSDNGAEFQSTYMLDY 2201
L+IVDD+SR VW +L+ KSEV +LT F + QF K VK IRSDNG EF + Y
Sbjct: 590 LTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEFMC--LSSY 647
Query: 2202 YKEHGIVLETSCTYTPQQNGVVERKHRHILEVARALRFQENLPIEFWGECVLTAVYIINR 2381
+KE GIV +TSC TPQQNG VERKHRHIL V+RAL FQ +LPI+FWGE V+TA Y+INR
Sbjct: 648 FKEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINR 707
Query: 2382 LPSRAINDKTQHEILLGKEPVYDHMRVFGCLAYAHDNKR-KDKFDERGRPCIFVGYPNGQ 2558
PS N + +E+L G +P YD +RVFG YAH R KDKF ER R CIFVGYP GQ
Sbjct: 708 TPSSIHNGLSPYELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQ 767
Query: 2559 KGYRVYDLKNREIYTSRDVTFVEHSYPFKEKNSELGHK---INPINGDDAWESATV---- 2717
KG++VYDL E SRDV F E+ +P+ + + PI D+ W T
Sbjct: 768 KGWKVYDLSTNEFIVSRDVVFRENVFPYATNEGDTIYTPPVTCPITYDEDWLPFTTLEDR 827
Query: 2718 EAQHEYITGGDSINIDLVENDSQEGTQQELTTMGHEQDDSGPIQELTIAPENEIAH---- 2885
+ Y++ ++ E+D++ T Q L T + T P N +
Sbjct: 828 GSDENYLSDPPVCVTNVSESDTEHDTPQSLPTPVDDPLSPSTSVTPTQTPTNSSSSTSPS 887
Query: 2886 ------EHHTTPEMKNEIEVRRGQRTRRQPKHLENFV---TDMPPSVDHSQPTPTSGTST 3038
+ TTP ++N R+G+R +QP L++++ P+ H TS +S+
Sbjct: 888 TNVSPPQQDTTPIIENT-PPRQGKRQVQQPARLKDYILYNASCTPNTPHVLSPSTSQSSS 946
Query: 3039 V------YPLSQFVSYNKFSEAHKAFLAAITSRDEPKYFHQAIKDPNWCDAMKKEVDALE 3200
YPL+ ++S FS HK FLAAIT+ DEPK+F + +K W DAM KEVDALE
Sbjct: 947 SIQGNLQYPLTDYISDECFSAGHKVFLAAITANDEPKHFKEDVKVKVWNDAMYKEVDALE 1006
Query: 3201 ANGTWKLVHFPQGKRAIDSKWVYKIKYKPNGEIERYKARLVAKGFTQMEGIDFHETFAPV 3380
N TW +V P GK AI S+WVYK K+ +G +ERYKARLV +G Q+EG D+ ETFAPV
Sbjct: 1007 VNKTWDIVDLPTGKVAIGSQWVYKTKFNADGTVERYKARLVVQGNNQIEGEDYTETFAPV 1066
Query: 3381 AKLVTVRCLLTVAAKRGWEVHQLDVNNAFLHGDLAEEVYMKIPQGFAKKGEMRVCKLQKS 3560
K+ TVR LL + A WEV+Q+DV+NAFLHGDL EEVYMK+P GF +VC+L+KS
Sbjct: 1067 VKMTTVRTLLRLVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKS 1126
Query: 3561 LYGLKQASRNWYQKFTRALLDIGFRQSHADHSLFIFKSDNIHIAALIYVDDVLLAGNDRE 3740
LYGLKQA R W++K + AL GF Q + D+S F + I + L+YVDD+++ GND
Sbjct: 1127 LYGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKGIELRVLVYVDDLIICGNDEY 1186
Query: 3741 RIVNIKSYLDAKFSINDLGPLKYFLGIEVARSSEGFVLSQRKYTLDILEECGLQASRPSA 3920
+ K YL FS+ DLG LKYFLGIEV+R G A R +
Sbjct: 1187 MVQKFKEYLGRCFSMKDLGKLKYFLGIEVSR--------------------GPDAPREAH 1226
Query: 3921 IPMEQNIKLHFEDNSPIIDAAQYRRLVGRLLYLTVTRPDITFSVNLLSQFISCPRQTHMN 4100
+ I + + SP G+ + L+ + D+T V S F SCP
Sbjct: 1227 LEAAMRI-VRYLKGSP-----------GQGILLSANK-DLTLEVYCDSDFQSCP------ 1267
Query: 4101 AAVRVLRYLKMTPGQGLFLLADGGLSLEAYCDADWGGCQFTRRSSTGYFISLGGAPVSWR 4280
TRRS + Y + LGG+P+SW+
Sbjct: 1268 ---------------------------------------LTRRSLSAYVVLLGGSPISWK 1288
Query: 4281 TKKQSVVARSSAEAEYRAMAATVSELLWLRWMLKDLGAHQHGPTPMFCDNQAARHIAVNP 4460
TKKQ V+ SSAEAEYRAM+ + E+ WL +LK+LG PT +FCD++AA IA NP
Sbjct: 1289 TKKQDTVSHSSAEAEYRAMSVALKEIKWLNKLLKELGITLAAPTRLFCDSKAAISIAANP 1348
Query: 4461 VFHERTKHVEMDCYFVRERVERGDIEPRKISTNLQIADILTKALGTVRFRFLRSKLGVRD 4640
VFHERTKH+E DC+ VR+ V G I + T+ Q+ADI TKALG +F +L SKLG+++
Sbjct: 1349 VFHERTKHIERDCHSVRDAVRDGIITTHHVRTSEQLADIFTKALGRNQFIYLMSKLGIQN 1408
Query: 4641 LHLPT 4655
LH PT
Sbjct: 1409 LHTPT 1413
>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
Length = 1428
Score = 991 bits (2563), Expect = 0.0
Identities = 573/1510 (37%), Positives = 852/1510 (56%), Gaps = 82/1510 (5%)
Frame = +3
Query: 351 IDVMSPYYIHASDNPGQVYVS-ELLHDGNYRDWANDMSNALFAKNKIGFVDG--TIPMPK 521
ID P +I SD+ V + +L+ Y W+ M AL + K GFV G T + K
Sbjct: 6 IDQNDPLFIGNSDSSSAVLIPIKLVGSEKYGIWSRAMRIALLGRRKYGFVTGACTRALYK 65
Query: 522 PDSPELIYWMRCNAMVKGWLNSAMNKEIRSSVKYAKTAREIWIDLEERFGKESAPRAYEL 701
+ E W CNA+V WL + +++E+ S + YA + +W DL+ERF K + R Y+L
Sbjct: 66 DELHE--QWETCNAIVLSWLMNTVSEELLSGIVYATNSCSVWNDLKERFDKVNRVRIYQL 123
Query: 702 RQALTLLRQEKLSVSAYYTKLRGLWDEIQSVSPTPRCTCSGCTCDIQKQLTVMREKEQLY 881
+ +T L Q SVS Y++KL+ LW+E + P+P CS TC K+ E+ +L
Sbjct: 124 HRDITTLSQGTDSVSHYFSKLKTLWNEYDVIVPSP---CS--TCSQSKEYNDHLEQMRLI 178
Query: 882 EFLMGLDDSFATVKIQILSTKPILSLGAAYHLVAEDEQQRLIAAARKPSVQAAAFQIQSK 1061
+FL GL++S+ + QIL S+ AY ++ EDE Q ++ +V+ + + S
Sbjct: 179 QFLSGLNESYDQARRQILLKGTTPSMNQAYAMIIEDEIQH--SSCMDNAVEKPSSMVMSV 236
Query: 1062 RDDREATDRRYGRKEKLRCNHCQKPNHTEDQCFEIIGYPPGWRK-----------NVRKG 1208
++ A Y K +C++C HT+D C+++IGYP W++ N+R G
Sbjct: 237 NRNQGAEKEHYKGK---KCDYCHFLGHTKDNCYKLIGYPSDWKQRKKPGYGNGNGNMRNG 293
Query: 1209 SQ----------------------------QNDQRSGPKVAHVG-VETSPILGLSQDQ-- 1295
+ NDQ P A +E + + + + Q
Sbjct: 294 TGTSQFNGYGGQSSGNNGGYGRGYQAANNISNDQYDHPSAASSNQMENNNMQKVPKGQTF 353
Query: 1296 ----YARLVQFLNPDNENSK---VAGSTTNPTANMAGKINFDKPWVIDSGATEHITCDER 1454
Y ++++ LN D + +K +AG TT N A + W++DSGAT HI +++
Sbjct: 354 TEKEYKQIMEMLNRDVQETKQVNMAGITTCLMTNPA-----IQDWIVDSGATHHIIANKQ 408
Query: 1455 FLEIGTETGTSL--PVKIPNGDTIPVKNVGNARLPNGLKIHRVLNIPTFQCNLLSVSRLT 1628
L E S V +P GD + V ++G P F +
Sbjct: 409 LLTTRHELTKSQMNQVHLPTGDKVTVSHIGET--------------PIFDNEVAR----- 449
Query: 1629 NDFNCALIFFPDFCVMQDLPSRNLIGVGRQFDGLY---------------CLEPVKNEGM 1763
V+ DL S + G+GR+ GLY C + + + G+
Sbjct: 450 -------------SVLHDLCSGRVKGIGREEGGLYSFKANFSSKQKEEIKCAQEIVDAGV 496
Query: 1764 AMSVTVDPEIWHRRLGHASGAKLQKLPILAKSN-NGNNIICDSCVRAKQTRLPFPSSSIK 1940
V D EIWHRRLGH S L+ L I + S +G C C AKQTRL FP S+ +
Sbjct: 497 ---VRQDTEIWHRRLGHPSQQILKLLKIDSSSKGDGIPAHCPVCPLAKQTRLTFPVSTTR 553
Query: 1941 TNSCFELIHCDIWGSYKTASFSGAHYFLSIVDDYSRGVWIFLMKQKSEVGHILTMFCNMV 2120
T+ F+++H D+WG YKT + + HYFL+IVDDYSR VW+ L++ KSE + F +M+
Sbjct: 554 TSMMFDVVHMDLWGPYKTPTLNRKHYFLTIVDDYSRFVWVHLLQLKSETIVAIKNFFSMI 613
Query: 2121 KTQFDKKVKRIRSDNGAEFQSTYMLDYYKEHGIVLETSCTYTPQQNGVVERKHRHILEVA 2300
TQF+ VK +RSDNG EF ++ D + GI+ ++SC +TPQQNGVVERKHRHIL +A
Sbjct: 614 NTQFNSHVKVVRSDNGTEFLNSQCKDLFNHLGILHQSSCPHTPQQNGVVERKHRHILNIA 673
Query: 2301 RALRFQENLPIEFWGECVLTAVYIINRLPSRAINDKTQHEILLGKEPVYDHMRVFGCLAY 2480
RA+RFQ +LPI FWG C+ AVY++NRLPS A ++K+ +E+L K+P H++V GCL Y
Sbjct: 674 RAIRFQAHLPIRFWGYCIRAAVYLMNRLPSSANSNKSAYELLYCKQPSLFHLKVIGCLCY 733
Query: 2481 AHDNKRKDKFDERGRPCIFVGYPNGQKGYRVYDLKNREIYTSRDVTFVEHSYPFKEKNSE 2660
A + DKF R I +GY QKGY + D+ + +++ +RDV F E +PF ++ S+
Sbjct: 734 ATTVPKGDKFSARASAAILLGYSELQKGYVLLDIHSTKVHVNRDVVFHEEIFPFAKERSQ 793
Query: 2661 LGHKINPINGD--DAWESATVEAQHEYITGGDSINIDLVENDSQEGTQQELTTMGHEQDD 2834
L + ++G + E+ T+EA+ I +V DSQ G+E +
Sbjct: 794 LD-PLGDVHGSPLEKAENQTIEAE---IDNSVHAETSMVHEDSQ----------GNETES 839
Query: 2835 SGPIQELTIAPENEIAHEHHTTPEMKNEIEVRRGQRTRRQPKHLENFVTDMPPSVDHSQP 3014
Q + E++ H P + VRR R ++P ++++
Sbjct: 840 YSENQMSRPSTTEEVSENTHAIPSHVDSY-VRRSSRNIKEPMWMKDY------------- 885
Query: 3015 TPTSG-TSTVYPLSQFVSYNKFSEAHKAFLAAITSRDEPKYFHQAIKDPNWCDAMKKEVD 3191
T T G +ST +P++ +++Y K ++FL+ ++ EPK F QA +D W AMK+E+
Sbjct: 886 TITKGHSSTKHPMASYLNYEKLKPECRSFLSKLSEYTEPKNFKQASQDERWIQAMKQEIK 945
Query: 3192 ALEANGTWKLVHFPQGKRAIDSKWVYKIKYKPNGEIERYKARLVAKGFTQMEGIDFHETF 3371
ALE N TW++V P+G A+ SKW+YK+KYK NGEIER+KARLVAKG++Q EG+D+H+TF
Sbjct: 946 ALEENNTWQVVELPEGMHAVGSKWIYKVKYKANGEIERFKARLVAKGYSQQEGLDYHDTF 1005
Query: 3372 APVAKLVTVRCLLTVAAKRGWEVHQLDVNNAFLHGDLAEEVYMKIPQGFAKKGEMRVCKL 3551
+PVAK+VTVRC++ +A +GW ++Q+DV NAFL G L EEVYMK+P+GFAK GE +VCKL
Sbjct: 1006 SPVAKMVTVRCVIALAVSKGWTLYQMDVYNAFLQGVLGEEVYMKMPEGFAKPGENKVCKL 1065
Query: 3552 QKSLYGLKQASRNWYQKFTRALLDIGFRQSHADHSLFIFKSDNIHIAALIYVDDVLLAGN 3731
KSLYGLKQASR W K T+ L GF QS D+SLF K + L+YVDD+L+ G+
Sbjct: 1066 LKSLYGLKQASRQWNLKLTKVLQATGFSQSAHDYSLFTLKRGEDIVIVLVYVDDLLITGS 1125
Query: 3732 DRERIVNIKSYLDAKFSINDLGPLKYFLGIEVARSSEGFVLSQRKYTLDILEECGLQASR 3911
+ + I +K+ L +F + DLG LK+FLGIEV RSS G +L+QRKY L+++ E GL ++
Sbjct: 1126 NMQLIAEVKACLHKQFKLKDLGELKFFLGIEVLRSSGGIILNQRKYILELIAEAGLTGAK 1185
Query: 3912 PSAIPMEQNIKL---------HFEDNSPIIDAAQYRRLVGRLLYLTVTRPDITFSVNLLS 4064
P+ PME N++L + + + D Y+RL+G+L+Y+T+TRPDI+++V LS
Sbjct: 1186 PATAPMESNLRLTSVEHDQANGYNKDDVLHDITSYQRLIGKLIYVTITRPDISYAVQTLS 1245
Query: 4065 QFISCPRQTHMNAAVRVLRYLKMTPGQGLFLLADGGLSLEAYCDADWGGCQFTRRSSTGY 4244
QF+ P+++H+ AA RV+RYLK + GQG++L ++ + +CD+DW C TRRS TGY
Sbjct: 1246 QFMQSPKKSHIEAATRVIRYLKGSVGQGVWLHSEPTNIITCWCDSDWAACPNTRRSITGY 1305
Query: 4245 FISLGGAPVSWRTKKQSVVARSSAEAEYRAMAATVSELLWLRWMLKDLGAHQHGPTPMFC 4424
I G SSAEAEYR+MA+ VSE+ WL + K+LG + P +F
Sbjct: 1306 VIKFG---------------ESSAEAEYRSMASAVSEITWLLGLFKELGVNVQLPITIFS 1350
Query: 4425 DNQAARHIAVNPVFHERTKHVEMDCYFVRERVERGDIEPRKISTNLQIADILTKALGTVR 4604
D+++A +A NPV +ERTKH+E+DC+F+R++++ G++ + T Q+ADILTK L V+
Sbjct: 1351 DSKSAIQLAANPVLYERTKHIEIDCHFIRDKIKAGEVNTAYVHTQQQLADILTKGLSQVQ 1410
Query: 4605 FRFLRSKLGV 4634
L KLGV
Sbjct: 1411 HVHLLGKLGV 1420
>gb|KYP42321.1| Copia protein [Cajanus cajan]
Length = 1456
Score = 982 bits (2539), Expect = 0.0
Identities = 570/1476 (38%), Positives = 822/1476 (55%), Gaps = 76/1476 (5%)
Frame = +3
Query: 456 MSNALFAKNKIGFVDGTIPMPKPDSPELIYWMRCNAMVKGWLNSAMNKEIRSSVKYAKTA 635
M AL +KNK F+DG++P P P W RCN V WL +M I SV Y TA
Sbjct: 1 MLTALESKNKEQFIDGSLPSPPTSDPLRSTWRRCNKTVMSWLIRSMTPSIAQSVLYMDTA 60
Query: 636 REIWIDLEERFGKESAPRAYELRQALTLLRQEKLSVSAYYTKLRGLWDEIQSVSPTPRCT 815
EIW DL ERF R +L+ ++ +Q +VS YYT L+ LW +++ C+
Sbjct: 61 AEIWKDLCERFSHGDKFRISDLQASVHECKQGDSTVSQYYTHLKTLWKQLEQYRSVLICS 120
Query: 816 CSG-CTCDIQKQLTVMREKEQLYEFLMGLDDSFATVKIQILSTKPILSLGAAYHLVAEDE 992
C C+C I ++ RE + + +FL GL++ ++ V+ IL P+ S+ + L+ + E
Sbjct: 121 CDNPCSCGILLKIKKEREDDCVIKFLRGLNEEYSQVRSNILMMDPMPSITKTFSLIQQHE 180
Query: 993 QQRLIAAARKPSVQAAAFQI----------------QSKRDDREATDR---RYGR---KE 1106
++ + PS + +F + R + +R R+GR +
Sbjct: 181 REIGGTSLLSPSTDSTSFAALTDASMKPSSFERGGSSNNRGGGSSNNRGGGRFGRGNGRG 240
Query: 1107 KLRCNHCQKPNHTEDQCFEIIGYPPGWRKNVRKGSQQN--------DQRSGPKVAHVGVE 1262
C C+K NHT D CFEI GYP G+R + S D + + A
Sbjct: 241 NRFCAKCKKTNHTIDSCFEIYGYPAGYRNRDKSNSTSKAFANLTTVDSDTASRSATPEES 300
Query: 1263 TSPI-LGLSQDQYARLVQFLNPDNE-NSKVAGSTTNPTANMAGKINFDKPWVIDSGATEH 1436
++ LS++QY + + + + V NP + G WV+DSGAT+H
Sbjct: 301 SNQTQFTLSKEQYHAFLALIQQNKDVPHSVNHVQQNPKNSSPGTPFSSSLWVLDSGATDH 360
Query: 1437 ITCDERFLEIGTETGTSLPVKIPNGDTIPVKNVGNARLPNGLKIHRVLNIPTFQCNLLSV 1616
I C + L + + +PN T+ K G RL + L + +P F +L+S+
Sbjct: 361 I-CPSQHLFDSLNPIKPISISLPNHTTVLAKLSGTVRLGD-LVLPNTFYVPHFAMHLISI 418
Query: 1617 SRLTNDFNCALIFFPDFCVMQDLPSRNLIGVGRQFDGL-YCLEPVKNEGMAMSV------ 1775
RLT+ +C ++F C + + IGV ++ GL Y L V+++ A ++
Sbjct: 419 PRLTSS-DCLILFCDTNCHIVQKSTSKTIGVAKKKQGLFYLLNSVEHDLTASTLLDIHPF 477
Query: 1776 ----------TV---------------DPEIWHRRLGHASGAKLQKLPILAKSNNGNNI- 1877
TV D +WH +LGH +Q++ + +
Sbjct: 478 FNQCFSTINNTVHDTLYKNAINNNTLNDSMLWHSKLGHVPNKVMQQICSQNSAIPFHKFE 537
Query: 1878 ICDSCVRAKQTRLPFPSSSIKTNSCFELIHCDIWGSYKTASFSGAHYFLSIVDDYSRGVW 2057
+CD C +KQ L F +S ++ FELIH DIWG +SF G YFL++VDDYSR W
Sbjct: 538 VCDVCHYSKQKNLSFSNSHTTSSRFFELIHVDIWGPLNVSSFQGYKYFLTVVDDYSRFTW 597
Query: 2058 IFLMKQKSEVGHILTMFCNMVKTQFDKKVKRIRSDNGAEFQSTYMLDYYKEHGIVLETSC 2237
L+K KSEV IL F +++ QFD +KR+RSDNG EF Y+ D+++ GI+ ETSC
Sbjct: 598 THLLKTKSEVKAILPSFITLIEKQFDVHLKRLRSDNGKEF---YLHDFFQNKGILHETSC 654
Query: 2238 TYTPQQNGVVERKHRHILEVARALRFQENLPIEFWGECVLTAVYIINRLPSRAINDKTQH 2417
PQQNG+VERKH+HIL V RAL FQ LP +FW V A +IINRLP+ ++ K+
Sbjct: 655 VERPQQNGIVERKHQHILNVCRALLFQAKLPKQFWSFAVKQATHIINRLPTPLLSQKSPF 714
Query: 2418 EILLGKEPVYDHMRVFGCLAYAHD-NKRKDKFDERGRPCIFVGYPNGQKGYRVYDLKNRE 2594
E++ +P ++VFGCLA+A + ++ K D R CIF+GY NG KG+ +++L N+
Sbjct: 715 EMIYNCKPDLTELKVFGCLAFATTLSSKRTKLDRRASKCIFLGYKNGTKGFLLFNLHNKS 774
Query: 2595 IYTSRDVTFVEHSYPFKEKNSELGHK----INPINGDDAWESATVEAQHEYITGGDSINI 2762
SRDV F E +P+ + ++ + +D + + G SI +
Sbjct: 775 FLISRDVLFYEKIFPYSAHVPSMSASDSLLLDVVKDNDTTIYSDPFPTTTFSHGSPSIPL 834
Query: 2763 DLVENDSQEGTQQELTTMGHEQDDSGPIQELTIAPENEIAHE---HHTTPEMKNEI--EV 2927
D S+ TT+ ++ PI I E +TT + + +
Sbjct: 835 DTPLPSSE-------TTISTDRPPFSPINTCPIPTATLSTPELPSSNTTNDASQVVMPQT 887
Query: 2928 RRGQRTRRQPKHLENFVTDMPPSVDHSQPTPTSGTSTVYPLSQFVSYNKFSEAHKAFLAA 3107
R R R+ P++L+ + + + + ++ ++ +YPLS FV+YN S +H +F +
Sbjct: 888 RVSTRIRKPPRYLQEYYCE-------NLASSSAASNCLYPLSSFVTYNNCSPSHTSFCLS 940
Query: 3108 ITSRDEPKYFHQAIKDPNWCDAMKKEVDALEANGTWKLVHFPQGKRAIDSKWVYKIKYKP 3287
I+++ EP F +A + W AM+ E+ ALE N TW LV P+GKR + KWVY++KYK
Sbjct: 941 ISAQHEPTSFKEANSEECWRRAMEAELQALEKNQTWSLVRLPEGKRPVGCKWVYRVKYKV 1000
Query: 3288 NGEIERYKARLVAKGFTQMEGIDFHETFAPVAKLVTVRCLLTVAAKRGWEVHQLDVNNAF 3467
+G +ERYKARLVAKGFTQ EG+D+ ETF+PV KL TVR LL++AA W +HQLDV+NAF
Sbjct: 1001 DGSVERYKARLVAKGFTQTEGVDYFETFSPVVKLSTVRFLLSLAAAHNWFLHQLDVDNAF 1060
Query: 3468 LHGDLAEEVYMKIPQGFAKKGEMRVCKLQKSLYGLKQASRNWYQKFTRALLDIGFRQSHA 3647
LHGDL EEVYMK P GF VCKL KSLYGLKQASR W QK T AL+ + F QS
Sbjct: 1061 LHGDLFEEVYMKPPPGFKLSHPRLVCKLHKSLYGLKQASRQWNQKLTEALISLNFIQSST 1120
Query: 3648 DHSLFIFKSDNIHIAALIYVDDVLLAGNDRERIVNIKSYLDAKFSINDLGPLKYFLGIEV 3827
DHSLFI KS + A L+YVDDV+L GND I +K+YL A+F I DLGPLK+FLG+E+
Sbjct: 1121 DHSLFIKKSHSSITALLVYVDDVVLTGNDMAEISAVKAYLHAQFHIKDLGPLKFFLGLEI 1180
Query: 3828 ARSSEGFVLSQRKYTLDILEECGLQASRPSAIPMEQNIKLHFEDNSPIIDAAQYRRLVGR 4007
ARS G +L+QRKY L++L E GL +P + P++ ++KL+ + P+ D +RRL+GR
Sbjct: 1181 ARSQSGLILNQRKYCLELLSEHGLTDCKPVSTPIDASVKLYASEGLPLDDPTIFRRLIGR 1240
Query: 4008 LLYLTVTRPDITFSVNLLSQFISCPRQTHMNAAVRVLRYLKMTPGQGLFLLADGGLSLEA 4187
LLYLT TRPDI+F+V LSQF+ PR TH AA+R+LRYLK +P GLF + ++A
Sbjct: 1241 LLYLTNTRPDISFAVQQLSQFVDSPRATHFQAALRILRYLKSSPALGLFYPSQTEHRIQA 1300
Query: 4188 YCDADWGGCQFTRRSSTGYFISLGGAPVSWRTKKQSVVARSSAEAEYRAMAATVSELLWL 4367
+ D+DW C TRRS TG+ I G A +SW++KKQS V+RSS+EAEYRA+A+ EL WL
Sbjct: 1301 FSDSDWASCPNTRRSVTGFCIFYGSALISWKSKKQSTVSRSSSEAEYRALASVTCELQWL 1360
Query: 4368 RWMLKDLGAHQHGPTPMFCDNQAARHIAVNPVFHERTKHVEMDCYFVRERVERGDIEPRK 4547
++ DL + P +FCD+Q+A +IA NP FHERTKH+E+DC+ R ++++G I
Sbjct: 1361 LFLCHDLSINIPTPFSIFCDSQSAIYIAKNPTFHERTKHIEVDCHLTRLKIQQGLIHLFH 1420
Query: 4548 ISTNLQIADILTKALGTVRFRFLRSKLGVRDLHLPT 4655
+ + Q+AD+ TKAL F SKL + D++ PT
Sbjct: 1421 VPSKSQLADVFTKALYPRNFTEAVSKLCLIDIYNPT 1456
>gb|KYP63761.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1048
Score = 975 bits (2521), Expect = 0.0
Identities = 516/1101 (46%), Positives = 697/1101 (63%), Gaps = 19/1101 (1%)
Frame = +3
Query: 1407 WVIDSGATEHITCDERFLEIGTETGTSLPVKIPNGDTIPVKNVGNARLPNGLKIHRVLNI 1586
W+ID+GA+ H+T + L G PV++P+G + G L GLK+ VL +
Sbjct: 8 WIIDTGASSHMTGNLSLL-CGLRDVVGCPVRLPDGKQLMANKEGTVTLDGGLKVENVLYV 66
Query: 1587 PTFQCNLLSVSRLTNDFNCALIFFPDFCVMQDLPSRNLIGVGRQFDGLYCLEPVKNE-GM 1763
PT CNLLS+S+LTN+ NC + F + CVMQD S+ LIGVG Q DGLY + +++E
Sbjct: 67 PTLSCNLLSISQLTNETNCVVYFTNNLCVMQDCTSKMLIGVGEQRDGLYFFKGIRSEKAH 126
Query: 1764 AMSVTVDPEIWHRRLGHASGAKLQKLPILAKSNNG--NNIICDSCVRAKQTRLPFPSSSI 1937
+ T + +WH+R+GH S K+ KL + +N N CD C+RAKQTR FP S+
Sbjct: 127 KANGTCELNLWHQRMGHPS-FKVTKLASNMRCDNSILKNKPCDVCLRAKQTRDVFPLSTN 185
Query: 1938 KTNSCFELIHCDIWGSYKTASFSGAHYFLSIVDDYSRGVWIFLMKQKSEVGHILTMFCNM 2117
+ FELIHCD+WG Y+T S GA YFL+I+DD+SR +WI+L+ K EV L F +
Sbjct: 186 NASDSFELIHCDLWGPYRTPSSCGASYFLTIMDDFSRAIWIYLISDKREVSRTLLNFFAL 245
Query: 2118 VKTQFDKKVKRIRSDNGAEFQSTYMLDYYKEHGIVLETSCTYTPQQNGVVERKHRHILEV 2297
++ QF K++K +RSDNG EF T + +Y+ EHGIV +TSC TPQQNG VERKHRHIL V
Sbjct: 246 IERQFGKQIKVLRSDNGTEF--TCLRNYFHEHGIVFQTSCPGTPQQNGRVERKHRHILNV 303
Query: 2298 ARALRFQENLPIEFWGECVLTAVYIINRLPSRAINDKTQHEILLGKEPVYDHMRVFGCLA 2477
ARALRFQ NLPI FWGECVLTA Y+INR P+ ++ KT +E+L G+ P+Y+H++VFGCL
Sbjct: 304 ARALRFQGNLPISFWGECVLTAGYLINRTPTPVLSGKTPYEMLYGQAPMYEHLKVFGCLC 363
Query: 2478 YAHD-NKRKDKFDERGRPCIFVGYPNGQKGYRVYDLKNREIYTSRDVTFVEHSYPFKEKN 2654
YAH+ ++ DKF R R CIFVGYP G+KG++++DL + + SRDV F E +PF
Sbjct: 364 YAHNLDRHGDKFASRSRKCIFVGYPYGKKGWKLFDLDTQCYFVSRDVEFFETEFPF---- 419
Query: 2655 SELGHKINPINGDDAWESATVEAQHEYITGGDSINIDLVENDSQ--EGTQQELTTMGHEQ 2828
P G S ++ + D ++D ND++ E T E+ +G E
Sbjct: 420 -------TPTAGVKYDLSVDSSLMNDTLDNDDDNDLD---NDTRMGENTLNEVV-VGSE- 467
Query: 2829 DDSGPIQELTIAPENEIAHE-----HHTTPEMKNEIEVR--------RGQRTRRQPKHLE 2969
++E T+A ++E + E ++ TP + + VR RG RT+ L
Sbjct: 468 -----VREGTVALDSERSDELVEEGNNPTPNVDSLELVRQSSLEELGRGHRTKLPSVKLR 522
Query: 2970 NFVTDMPPSVDHSQPTPTSGTSTVYPLSQFVSYNKFSEAHKAFLAAITSRDEPKYFHQAI 3149
+VT ++ P+P+ TS + ++
Sbjct: 523 EYVTH---TIKKLSPSPSQSTSQ---------------------------------YSSV 546
Query: 3150 KDPNWCDAMKKEVDALEANGTWKLVHFPQGKRAIDSKWVYKIKYKPNGEIERYKARLVAK 3329
+D W AM++E+ ALEANGTW L P GK+ + KWVYKIK+ +G IERYKARLV
Sbjct: 547 QDAKWRLAMQQELHALEANGTWSLETLPDGKKPLGCKWVYKIKHNSDGTIERYKARLVIL 606
Query: 3330 GFTQMEGIDFHETFAPVAKLVTVRCLLTVAAKRGWEVHQLDVNNAFLHGDLAEEVYMKIP 3509
G Q EG+D+ ETFAPV K+VTVR +L VAA + WE+HQ+DV+NAFLHGDL E+VYMK+P
Sbjct: 607 GNHQKEGVDYTETFAPVVKMVTVRLVLAVAATKKWELHQMDVHNAFLHGDLHEDVYMKLP 666
Query: 3510 QGFAKKGEMRVCKLQKSLYGLKQASRNWYQKFTRALLDIGFRQSHADHSLFIFKSDNIHI 3689
GF VCKL+KSLYGLKQA R W+ K + AL++ GFRQS DHSLF + + +
Sbjct: 667 PGFHASQPNHVCKLKKSLYGLKQAPRCWFAKLSSALINFGFRQSGCDHSLFTLLAHGVQM 726
Query: 3690 AALIYVDDVLLAGNDRERIVNIKSYLDAKFSINDLGPLKYFLGIEVARSSEGFVLSQRKY 3869
L+YVDD+++ GND I K YL F + DLG LKYFLG+EVAR+S G L QRKY
Sbjct: 727 MVLVYVDDLIICGNDSAAIQRFKEYLSKCFHMKDLGHLKYFLGVEVARNSSGIFLCQRKY 786
Query: 3870 TLDILEECGLQASRPSAIPMEQNIKLHFEDNSPIIDAAQYRRLVGRLLYLTVTRPDITFS 4049
LDI++E GL ++P A P+EQN +L I +YRRLVGRL+YL TRP++++
Sbjct: 787 ALDIIQEAGLLGAQPVATPLEQNHQLGLATGRYIDQPDRYRRLVGRLIYLCFTRPELSYC 846
Query: 4050 VNLLSQFISCPRQTHMNAAVRVLRYLKMTPGQGLFLLADGGLSLEAYCDADWGGCQFTRR 4229
V+ LSQF+ PR+ H NAA+R++RYLK +PGQG+ L + L +CD+DW GC TRR
Sbjct: 847 VHTLSQFMQQPREEHWNAAIRIVRYLKGSPGQGILLKSTSDFQLHGWCDSDWAGCPLTRR 906
Query: 4230 SSTGYFISLGGAPVSWRTKKQSVVARSSAEAEYRAMAATVSELLWLRWMLKDLGAHQHGP 4409
S+TG+ + LG +P+SW+TKKQ V+RSSAEAEYR+MA T EL WLR +L DLG GP
Sbjct: 907 STTGWVVFLGHSPISWKTKKQHTVSRSSAEAEYRSMATTCCELKWLRSLLADLGISHKGP 966
Query: 4410 TPMFCDNQAARHIAVNPVFHERTKHVEMDCYFVRERVERGDIEPRKISTNLQIADILTKA 4589
+ CD+QAA HIA NPVFHERTKH+E+DC+F+R + +G I+P + T Q+ADILTKA
Sbjct: 967 MHLHCDSQAALHIAKNPVFHERTKHIEVDCHFIRNEILQGTIQPSYVPTQEQLADILTKA 1026
Query: 4590 LGTVRFRFLRSKLGVRDLHLP 4652
LG +F+ L +KLG+R+ H P
Sbjct: 1027 LGRHQFQTLLNKLGIRNPHAP 1047
>gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1423
Score = 969 bits (2506), Expect = 0.0
Identities = 559/1462 (38%), Positives = 809/1462 (55%), Gaps = 27/1462 (1%)
Frame = +3
Query: 351 IDVMSPYYIHASDNPGQVYVSELLHDGNYRDWANDMSNALFAKNKIGFVDGTIPMPKPDS 530
+D +SPY++ +++NP VS L+D NY W+ M L KNK+ F+DG++ P
Sbjct: 9 LDPLSPYFLPSNENPSISLVSAPLNDHNYLSWSQSMLLVLGTKNKLAFIDGSLARPVTAG 68
Query: 531 PELIYWMRCNAMVKGWLNSAMNKEIRSSVKYAKTAREIWIDLEERFGKESAPRAYELRQA 710
+ W RCN +V W+ +++ + SV + TA +IW DL++R+ + A R EL +
Sbjct: 69 VDQTAWDRCNKLVISWIVQSLDTSLIPSVIWMPTASQIWNDLKKRYYQGDAFRISELLEE 128
Query: 711 LTLLRQEKLSVSAYYTKLRGLWDEIQSVSPTPRCTCSGCTCDIQKQLTVMREKEQLYEFL 890
+ L+Q +S++ Y+T L+GLW E+ P P CTC C I+ FL
Sbjct: 129 IYSLKQGNMSITHYFTTLQGLWQELDHFCPIPSCTCFTTECVIR--------------FL 174
Query: 891 MGLDDSFATVKIQILSTKPILSLGAAYHLVAEDEQQRLIAAARKPSVQAAAFQIQSKRDD 1070
GL++ ++ V+ Q++ P+ S+ + ++ + Q+R V A +
Sbjct: 175 KGLNEQYSNVRSQVMLMDPLPSVQKVFSMILQ--QEREFHGTNDNQVLAVTSNNERNNYK 232
Query: 1071 REATDRRYGRKEKLRCNHCQKPNHTEDQCFEIIGYPPGWRKNVRKGSQQNDQRSGPKVAH 1250
T +R C+HC + H D C++ G PP K+ R +Q
Sbjct: 233 GSKTFKRNKDYNTKVCSHCGRIGHLVDSCYKKHG-PPLQHKHGRIVNQYQSVSDEDTDDD 291
Query: 1251 VGVETSPILG------LSQDQYARLVQFLNPDNENS-----KVAGSTTNPTANMAGKI-- 1391
V + ++ + +Q+ L+ L S ++AG + + G I
Sbjct: 292 QSVHSQRVVSHNSGNMFTPEQHQALLALLQQSGSTSSHSVNQLAGPSILSSPKPPGMILS 351
Query: 1392 -----NFDKPWVIDSGATEHITCDERFLEIGTETGTSLPVKIPNGDTIPVKNVGNARLPN 1556
N D W+ID+GAT+H+ + F + L +++PNG + G L
Sbjct: 352 FPYSHNSDC-WIIDTGATDHVCKNINFFQSYRRIKPIL-IQLPNGSQVSTCVSGTVLLSK 409
Query: 1557 GLKIHRVLNIPTFQCNLLSVSRLTNDFNCALIFFPDFCVMQDLPSRNLIGVGRQFDGLYC 1736
+ VL IP F NL+SVS+L +C L F C +Q S +IG GLY
Sbjct: 410 TCYLTDVLFIPNFHFNLISVSKLAKTLSCTLTFSDSDCQIQANHSMRMIGAAELRAGLYA 469
Query: 1737 L-----EPVKNEGMAMSVTVDPEIWHRRLGHASGAKLQKLPILAKSNNGNNII--CDSCV 1895
+ V + + T ++WH RLGH S KL L N I C+ C
Sbjct: 470 MVSSPESNVVHHCTSHFFTYQSDLWHLRLGHLSHDKLSALKGSYPEIQCNKISLPCEICH 529
Query: 1896 RAKQTRLPFPSSSIKTNSCFELIHCDIWGSYKTASFSGAHYFLSIVDDYSRGVWIFLMKQ 2075
AK RLPFP S K+ + F+LIH DIWG AS G YFL+IVDD SR WIF MK
Sbjct: 530 LAKHKRLPFPDSLTKSENVFDLIHVDIWGPLSVASIFGHKYFLTIVDDKSRFTWIFFMKN 589
Query: 2076 KSEVGHILTMFCNMVKTQFDKKVKRIRSDNGAEFQSTYMLDYYKEHGIVLETSCTYTPQQ 2255
K E +L F + V+TQF + +K IR+DNG+EF + D+Y + GIV +TSC TPQQ
Sbjct: 590 KFETKLLLQNFVSFVQTQFQQNIKTIRTDNGSEF---LLKDWYAKLGIVHQTSCVNTPQQ 646
Query: 2256 NGVVERKHRHILEVARALRFQENLPIEFWGECVLTAVYIINRLPSRAINDKTQHEILLGK 2435
NGVVERKH+HIL +ARAL FQ N+ FW + AV++INRLP+R + + + +L +
Sbjct: 647 NGVVERKHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFLQQNSPYYVLYSE 706
Query: 2436 EPVYDHMRVFGCLAYAHD-NKRKDKFDERGRPCIFVGYPNGQKGYRVYDLKNREIYTSRD 2612
+P + H++VFGCLA+A + + K + R R C+F+GY +G KG+ +YDLK RE + SRD
Sbjct: 707 KPDFSHLKVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSSGTKGFIMYDLKTRETFISRD 766
Query: 2613 VTFVEHSYPFKEKNSELGHKINPINGDDAWESATVEAQHEYITGGDSINIDLVENDSQEG 2792
V F E+ +P ++ S I +G + + I N+D E++
Sbjct: 767 VQFYENIFPLQKDFS-----IQSTDGPVVPIAQMPLTSCDPIPSHTHDNLDETEHEHNSS 821
Query: 2793 TQQELTTMGHEQDDSGPIQELTIAPENEIAHEHHTTPEMKNEIEVRRGQRTRRQPKHLEN 2972
T M + + P E+ I PE++ R QR + +P +L++
Sbjct: 822 T----LPMTNSSNSDQPNIEINI-------------PEIR-----RTSQRVKNRPGYLQD 859
Query: 2973 FVTDMPPS-VDHSQPTPTSGTSTVYPLSQFVSYNKFSEAHKAFLAAITSRDEPKYFHQAI 3149
+ + S VD S T YP+S ++ Y +S ++F++ I+S EP+ + AI
Sbjct: 860 YHCTLAASKVDQSSSTAR------YPISDYLPYTSYSAVQQSFVSTISSIIEPRSYQDAI 913
Query: 3150 KDPNWCDAMKKEVDALEANGTWKLVHFPQGKRAIDSKWVYKIKYKPNGEIERYKARLVAK 3329
W +A++ E+DAL+ TW L P KRA+ +WV+K+KY +G +ERYKARLVAK
Sbjct: 914 NHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAK 973
Query: 3330 GFTQMEGIDFHETFAPVAKLVTVRCLLTVAAKRGWEVHQLDVNNAFLHGDLAEEVYMKIP 3509
GFTQ+ G+D+ +TF+PV ++ T+R L +AA W VHQLD+N AFLHGDL EEVYMK P
Sbjct: 974 GFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHGDLVEEVYMKPP 1033
Query: 3510 QGFAKKGEMRVCKLQKSLYGLKQASRNWYQKFTRALLDIGFRQSHADHSLFIFKSDNIHI 3689
G +VCKLQKSLYGLKQASR W K T L GF QS +D+SLF +++ I
Sbjct: 1034 PGLILSSPNKVCKLQKSLYGLKQASRQWNIKLTETLKLFGFVQSKSDYSLFTKRTNIGFI 1093
Query: 3690 AALIYVDDVLLAGNDRERIVNIKSYLDAKFSINDLGPLKYFLGIEVARSSEGFVLSQRKY 3869
A L+YVDD++++G+D I+ +K LD +FSI DLG L YFLG+E +RS +G + QRKY
Sbjct: 1094 AILVYVDDLIISGSDETEIMKVKRLLDKQFSIKDLGQLSYFLGLEFSRSDQGISVCQRKY 1153
Query: 3870 TLDILEECGLQASRPSAIPMEQNIKLHFEDNSPIIDAAQYRRLVGRLLYLTVTRPDITFS 4049
L++L++ GL AS+P + PM+ +LH + D + YRRLVGRL+YLT TRPD+ F+
Sbjct: 1154 ALELLQDTGLLASKPCSTPMDHTTRLHHDPLDLYSDPSSYRRLVGRLIYLTHTRPDLAFA 1213
Query: 4050 VNLLSQFISCPRQTHMNAAVRVLRYLKMTPGQGLFLLADGGLSLEAYCDADWGGCQFTRR 4229
V LSQF+ P H AA +VLRY+K TP +GLF + L L Y D+DW C +RR
Sbjct: 1214 VGKLSQFMHQPNNAHFQAARKVLRYVKATPTKGLFFPSSSDLKLTGYTDSDWATCPDSRR 1273
Query: 4230 SSTGYFISLGGAPVSWRTKKQSVVARSSAEAEYRAMAATVSELLWLRWMLKDLGAHQHGP 4409
S +G+ LG A VSW++KKQ+VV+RSS+EAEYRA+A V E WL +L D P
Sbjct: 1274 SISGFCFFLGNALVSWKSKKQNVVSRSSSEAEYRALALGVCEAQWLHKLLTDFQLQDLIP 1333
Query: 4410 TPMFCDNQAARHIAVNPVFHERTKHVEMDCYFVRERVERGDIEPRKISTNLQIADILTKA 4589
+FCDNQ+A +IA NPVFHERTKHVE+DC+ VR++V+ G I I+++ Q+ADILTK
Sbjct: 1334 ISLFCDNQSALYIAANPVFHERTKHVEIDCHTVRDQVQAGFIHLAPITSSGQLADILTKP 1393
Query: 4590 LGTVRFRFLRSKLGVRDLHLPT 4655
L F+ KLG+ + P+
Sbjct: 1394 LLPKMFQDFVCKLGLSNFTTPS 1415
>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
11.19) [Arabidopsis thaliana]
Length = 1633
Score = 969 bits (2505), Expect = 0.0
Identities = 565/1485 (38%), Positives = 833/1485 (56%), Gaps = 63/1485 (4%)
Frame = +3
Query: 363 SPYYIHASDNPGQVYVSELLHDGN-YRDWANDMSNALFAKNKIGFVDGTIPMPKPDSPEL 539
+P+++H SD+ G V VSE L+ + + W + AL +NK+GF+DGTI P D +
Sbjct: 33 NPHHLHTSDHAGLVLVSERLNTASDFHSWRRSIWMALNVRNKLGFIDGTIVKPPLDHRDY 92
Query: 540 IYWMRCNAMVKGWLNSAMNKEIRSSVKYAKTAREIWIDLEERFGKESAPRAYELRQALTL 719
W RCN V WL ++++K+I S+ + TA IW ++ RF ++ APR Y++ Q L+
Sbjct: 93 GAWSRCNDTVSTWLMNSVSKKIGQSLLFIPTAEGIWKNMLSRFKQDDAPRVYDIEQRLSK 152
Query: 720 LRQEKLSVSAYYTKLRGLWDEIQSVSPTPRCTCSGCTCDIQKQLTVMREKEQLYEFLMGL 899
+ Q + +SAYYT+L+ LW+E ++ P CTC C CD + ++++ + +FLMGL
Sbjct: 153 IEQGSMDISAYYTELQTLWEEHKNYVDLPVCTCGRCECDAAVKWERLQQRSHVTKFLMGL 212
Query: 900 DDSFATVKIQILSTKPILSLGAAYHLVAEDEQQRLIAAARKPSVQAAAFQIQSKRDDREA 1079
++S+ + IL KPI ++ A+++V +DE+Q+ I K
Sbjct: 213 NESYEQTRRHILMLKPIRTIEEAFNIVTQDERQKAIRPTPK------------------- 253
Query: 1080 TDRRYGRKEKLRCNHCQKPNHTEDQCFEIIGYPPGWRKNVR--------KGSQQNDQRSG 1235
D + K L C +C K HT +C++IIGYPPG++ + Q Q+S
Sbjct: 254 VDNQDQLKLPL-CTNCGKVGHTVQKCYKIIGYPPGYKAATSYRQPQIQTQPRMQMPQQSQ 312
Query: 1236 PKV------------AHVGVE---------TSPILGLS------QDQYARLVQF----LN 1322
P++ A V V+ +SP ++ Q + + F L
Sbjct: 313 PRMQQPIQHLISQFNAQVRVQEPAATSIYTSSPTATITEHGLMAQTSTSGTIPFPSTSLK 372
Query: 1323 PDNENSKVAGSTTNPTANMAGKINFDKPWVIDSGATEHITCD-ERFLEIGTETGTSLPVK 1499
+N N T + N+ W+IDSGA+ H+ D F E+ +G + V
Sbjct: 373 YENNNLTFQNHTLSSLQNVLSS----DAWIIDSGASSHVCSDLTMFRELIHVSGVT--VT 426
Query: 1500 IPNGDTIPVKNVGNARLPNGLKIHRVLNIPTFQCNLLSVSRLTNDFNCALIFFPDFCVMQ 1679
+PNG + + + G + + L +H VL +P F+ NL+SV C L
Sbjct: 427 LPNGTRVAITHTGTICITSTLILHNVLLVPDFKFNLISV--------CCL---------- 468
Query: 1680 DLPSRNLIGVGRQFDGLYCLEPVKNEGMAMSVTVDPEIWHRRLGHASGAKLQKL----PI 1847
+L +IG G+ ++ LY LE + + P + H S LQKL P
Sbjct: 469 ELTRGLMIGRGKTYNNLYILETQRT-------SFSPSLPAATSRHPSLPALQKLVSSIPS 521
Query: 1848 LAKSNNGNNIICDSCVRAKQTRLPFPSSSIKTNSCFELIHCDIWGSYKTASFSGAHYFLS 2027
L KS + C AKQ RL + S + +S F+LIH DIWG + S G YFL+
Sbjct: 522 L-KSVSSTASHCRISPLAKQKRLAYVSHNNLASSPFDLIHLDIWGPFSIESVDGFRYFLT 580
Query: 2028 IVDDYSRGVWIFLMKQKSEVGHILTMFCNMVKTQFDKKVKRIRSDNGAEFQSTYMLDYYK 2207
+VDD +R W+++MK KSEV +I +F ++ TQ++ K+K IRSDN E T + K
Sbjct: 581 LVDDCTRTTWVYMMKNKSEVSNIFPVFVKLIFTQYNAKIKAIRSDNVKELAFT---KFVK 637
Query: 2208 EHGIVLETSCTYTPQQNGVVERKHRHILEVARALRFQENLPIEFWGECVLTAVYIINRLP 2387
E G++ + SC YTPQQN VVERKH+H+L +AR+L FQ N+P+++W +CVLTA Y+INRLP
Sbjct: 638 EQGMIHQFSCAYTPQQNSVVERKHQHLLNIARSLLFQSNVPLQYWSDCVLTAAYLINRLP 697
Query: 2388 SRAINDKTQHEILLGKEPVYDHMRVFGCLAYAHDNKR-KDKFDERGRPCIFVGYPNGQKG 2564
S +++KT E+LL K P Y ++ CL YA N ++KF R RPC+F+GYP+G KG
Sbjct: 698 SPLLDNKTPFELLLKKIPDYTLLK--SCLCYASTNVHDRNKFSPRARPCVFLGYPSGYKG 755
Query: 2565 YRVYDLKNREIYTSRDVTFVEHSYPFKEKNSELGHKINPINGDDAWESATVEAQHEYITG 2744
Y+V DL++ I +R+V F E +PFK K + D S +
Sbjct: 756 YKVLDLESHSISITRNVVFHETKFPFKTS------KFLKESVDMFPNSILPLPAPLHFVE 809
Query: 2745 GDSINIDLVENDSQEGTQQELTTMGHEQDDSGPIQELTIAPENEIAHEHHTTPEMKNEIE 2924
++ DL +D+ T ++ S P T+ +N A + T N +
Sbjct: 810 SMPLDDDLRADDNNASTSNSASSAS-----SIPPLPSTVNTQNTDALDIDT-----NSVP 859
Query: 2925 VRRGQRTRRQPKHLEN-------FVTDMPPSVDHSQPTPTSGT-----STVYPLSQFVSY 3068
+ R +R + P +L F++ + P+ S TP+S +T YP+S +SY
Sbjct: 860 IARPKRNAKAPAYLSEYHCNSVPFLSSLSPTTSTSIETPSSSIPPKKITTPYPMSTAISY 919
Query: 3069 NKFSEAHKAFLAAITSRDEPKYFHQAIKDPNWCDAMKKEVDALEANGTWKLVHFPQGKRA 3248
+K + +++ A EPK F QA+K W A +E+ ALE N TW + +GK
Sbjct: 920 DKLTPLFHSYICAYNVETEPKAFTQAMKSEKWTRAANEELHALEQNKTWIVESLTEGKNV 979
Query: 3249 IDSKWVYKIKYKPNGEIERYKARLVAKGFTQMEGIDFHETFAPVAKLVTVRCLLTVAAKR 3428
+ KWV+ IKY P+G IERYKARLVA+GFTQ EGID+ ETF+PVAK +V+ LL +AA
Sbjct: 980 VGCKWVFTIKYNPDGSIERYKARLVAQGFTQQEGIDYMETFSPVAKFGSVKLLLGLAAAT 1039
Query: 3429 GWEVHQLDVNNAFLHGDLAEEVYMKIPQGFAKKGEMR-----VCKLQKSLYGLKQASRNW 3593
GW + Q+DV+NAFLHG+L EE+YM +PQG+ + VC+L KSLYGLKQASR W
Sbjct: 1040 GWSLTQMDVSNAFLHGELDEEIYMSLPQGYTPPTGISLPSKPVCRLLKSLYGLKQASRQW 1099
Query: 3594 YQKFTRALLDIGFRQSHADHSLFIFKSDNIHIAALIYVDDVLLAGNDRERIVNIKSYLDA 3773
Y++ + L F QS AD+++F+ S I L+YVDD+++A ND + N+K L +
Sbjct: 1100 YKRLSSVFLGANFIQSPADNTMFVKVSCTSIIVVLVYVDDLMIASNDSSAVENLKELLRS 1159
Query: 3774 KFSINDLGPLKYFLGIEVARSSEGFVLSQRKYTLDILEECGLQASRPSAIPMEQNIKLHF 3953
+F I DLGP ++FLG+E+ARSSEG + QRKY ++LE+ GL +PS+IPM+ N+ L
Sbjct: 1160 EFKIKDLGPARFFLGLEIARSSEGISVCQRKYAQNLLEDVGLSGCKPSSIPMDPNLHLTK 1219
Query: 3954 EDNSPIIDAAQYRRLVGRLLYLTVTRPDITFSVNLLSQFISCPRQTHMNAAVRVLRYLKM 4133
E + + +A YR LVGRLLYL +TRPDITF+V+ LSQF+S P HM AA +VLRYLK
Sbjct: 1220 EMGTLLPNATSYRELVGRLLYLCITRPDITFAVHTLSQFLSAPTDIHMQAAHKVLRYLKG 1279
Query: 4134 TPGQGLFLLADGGLSLEAYCDADWGGCQFTRRSSTGYFISLGGAPVSWRTKKQSVVARSS 4313
PGQ DADWG C+ +RRS TG+ I LG + ++W++KKQSVV+RSS
Sbjct: 1280 NPGQ----------------DADWGTCKDSRRSVTGFCIYLGTSLITWKSKKQSVVSRSS 1323
Query: 4314 AEAEYRAMAATVSELLWLRWMLKDLGAHQHGPTPMFCDNQAARHIAVNPVFHERTKHVEM 4493
E+EYR++A E++WL+ +LKDL P +FCDN++A H+A NPVFHERTKH+E+
Sbjct: 1324 TESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKLFCDNKSALHLATNPVFHERTKHIEI 1383
Query: 4494 DCYFVRERVERGDIEPRKISTNLQIADILTKALGTVRFRFLRSKL 4628
DC+ VR++++ G ++ + T Q+ADILTK L F L ++
Sbjct: 1384 DCHTVRDQIKAGKLKTLHVPTGNQLADILTKPLHPGPFHSLLKRI 1428