BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00022065
         (1250 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012834924.1| PREDICTED: RNA pseudouridine synthase 5 [Ery...   628   0.0  
ref|XP_011084348.1| PREDICTED: RNA pseudouridine synthase 5 isof...   608   0.0  
ref|XP_009589062.1| PREDICTED: RNA pseudouridine synthase 5 isof...   516   0.0  
ref|XP_009803600.1| PREDICTED: RNA pseudouridine synthase 5 isof...   511   e-178
ref|XP_009589060.1| PREDICTED: RNA pseudouridine synthase 5 isof...   510   e-178
ref|XP_004496322.1| PREDICTED: RNA pseudouridine synthase 5 [Cic...   509   e-178
ref|XP_009589057.1| PREDICTED: RNA pseudouridine synthase 5 isof...   510   e-177
ref|XP_009589063.1| PREDICTED: RNA pseudouridine synthase 5 isof...   506   e-176
ref|XP_010658419.1| PREDICTED: RNA pseudouridine synthase 5 isof...   506   e-176
ref|XP_003591952.2| pseudouridine synthase Rlu family protein [M...   505   e-176
ref|XP_012452101.1| PREDICTED: RNA pseudouridine synthase 5 isof...   505   e-176
ref|XP_011084350.1| PREDICTED: RNA pseudouridine synthase 5 isof...   501   e-176
ref|XP_011084349.1| PREDICTED: RNA pseudouridine synthase 5 isof...   501   e-176
gb|KYP74712.1| RNA pseudourine synthase 5 [Cajanus cajan]             503   e-175
ref|XP_009803599.1| PREDICTED: RNA pseudouridine synthase 5 isof...   504   e-175
gb|KHG01532.1| hypothetical protein F383_21699 [Gossypium arboreum]   503   e-175
ref|XP_009589056.1| PREDICTED: RNA pseudouridine synthase 5 isof...   504   e-175
emb|CBI31488.3| unnamed protein product [Vitis vinifera]              500   e-174
ref|XP_015942620.1| PREDICTED: RNA pseudouridine synthase 5 [Ara...   499   e-174
ref|XP_007009784.1| Pseudouridine synthase family protein [Theob...   499   e-174

>ref|XP_012834924.1| PREDICTED: RNA pseudouridine synthase 5 [Erythranthe guttata]
            gi|604335938|gb|EYU39826.1| hypothetical protein
            MIMGU_mgv1a008941mg [Erythranthe guttata]
          Length = 357

 Score =  628 bits (1619), Expect = 0.0
 Identities = 304/349 (87%), Positives = 326/349 (93%)
 Frame = +2

Query: 203  MVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDG 382
            MVSFG+PWPEFNDGIYYRDLLRPSD GATLI+FYSRKY+SSAPLHGWLQRIHNKQIT++G
Sbjct: 1    MVSFGDPWPEFNDGIYYRDLLRPSDDGATLIEFYSRKYQSSAPLHGWLQRIHNKQITVNG 60

Query: 383  CVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 562
             VVTDP  ILRGG ELVYHRLPWKEPDAP+L+EILYED+DVIALNKPSGLQVLPGGLFQQ
Sbjct: 61   GVVTDPNTILRGGAELVYHRLPWKEPDAPHLVEILYEDDDVIALNKPSGLQVLPGGLFQQ 120

Query: 563  RTVLTQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSA 742
            RTVLTQLQRHA      G QEPHPVPVHRLGRGTSG+LLCAKTK+AKSRLAAFFADGTS 
Sbjct: 121  RTVLTQLQRHA-----GGCQEPHPVPVHRLGRGTSGILLCAKTKLAKSRLAAFFADGTSV 175

Query: 743  VGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGK 922
            VGVCR ND QQK+TRNITKLYRALASG+IIEDEV IDQPIGLVKYPGVA GLYVASPSGK
Sbjct: 176  VGVCRENDQQQKSTRNITKLYRALASGIIIEDEVVIDQPIGLVKYPGVANGLYVASPSGK 235

Query: 923  PALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDH 1102
            PA SKVVVLERN+L+NSTLVQVEIQSGRPHQIRIHLSFIGHPL+GDPLYST GQPK SDH
Sbjct: 236  PAWSKVVVLERNMLNNSTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYSTGGQPKCSDH 295

Query: 1103 ESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAP 1249
            E VD+SFA+DGGYERPEKPVPGDCGYHLHAH V+F+HP++NEI EI+AP
Sbjct: 296  ELVDQSFAEDGGYERPEKPVPGDCGYHLHAHRVLFTHPVSNEIIEITAP 344


>ref|XP_011084348.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Sesamum indicum]
          Length = 380

 Score =  608 bits (1569), Expect = 0.0
 Identities = 293/349 (83%), Positives = 319/349 (91%)
 Frame = +2

Query: 203  MVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDG 382
            MVSFGEPWPEFNDGIYYRDL+R S +GATLI+FYSRKY+SSAPLHGWLQRIHNKQITIDG
Sbjct: 1    MVSFGEPWPEFNDGIYYRDLVRASGSGATLIEFYSRKYESSAPLHGWLQRIHNKQITIDG 60

Query: 383  CVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 562
            C+ TDP  ILR G ELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ
Sbjct: 61   CLATDPNTILREGAELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 120

Query: 563  RTVLTQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSA 742
            RTVLTQLQ  A NLT SG QE HPVPVHRLGRGTSG+LLCAKTK+AKSRLAAFFADGTS 
Sbjct: 121  RTVLTQLQLRAGNLTTSGCQEAHPVPVHRLGRGTSGILLCAKTKLAKSRLAAFFADGTSN 180

Query: 743  VGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGK 922
            VG+ R ND QQKA R+ITK+YRAL SG+IIEDE+ I+QPIGLV+YPGVAKGLYVASPSGK
Sbjct: 181  VGIYRRNDPQQKAGRSITKIYRALVSGIIIEDEIIIEQPIGLVRYPGVAKGLYVASPSGK 240

Query: 923  PALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDH 1102
            PALSKVVVLER++L  STLVQVEIQSGRPHQIRIH+SFIGHPLVGDPLY T GQPK S+H
Sbjct: 241  PALSKVVVLERDMLRKSTLVQVEIQSGRPHQIRIHVSFIGHPLVGDPLYGTGGQPKCSNH 300

Query: 1103 ESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAP 1249
            E V++SFA+DGGYERP KPVPGDCGYHLHAH +VF HP+TNEI +I++P
Sbjct: 301  EVVNQSFAEDGGYERPGKPVPGDCGYHLHAHRLVFPHPVTNEIIKITSP 349


>ref|XP_009589062.1| PREDICTED: RNA pseudouridine synthase 5 isoform X6 [Nicotiana
            tomentosiformis]
          Length = 381

 Score =  516 bits (1330), Expect = 0.0
 Identities = 255/348 (73%), Positives = 293/348 (84%), Gaps = 2/348 (0%)
 Frame = +2

Query: 212  FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 391
            FGEPWPEFNDG+ Y D++RP DAG TLI+FYSRKYKSSAPL GWLQRI NKQIT+D  VV
Sbjct: 16   FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 392  TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 571
            T P   LR G ELVYHRLPW+EPDAPYLL++L+ED+ +IALNKPSGLQVLPGGLFQQRTV
Sbjct: 76   TIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLFQQRTV 135

Query: 572  LTQLQRHADNLT--ASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 745
            LTQLQ H   LT  +SG ++ HPVPVHRLGRGTSG+LLCAKTK+AKSRLAA+FA+GTS V
Sbjct: 136  LTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAEGTSVV 195

Query: 746  GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 925
               +  +++ K  R I+K+YRAL SGVI  DEV I QPIG +KYPGVAKGLYVASPSGKP
Sbjct: 196  ED-KYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVASPSGKP 254

Query: 926  ALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHE 1105
            ALS V VLER+L +NSTLVQVEIQSGRPHQIRIHLSFIG PL+GDPLY + GQPK  D E
Sbjct: 255  ALSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKCFDPE 314

Query: 1106 SVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAP 1249
             +DESF +DGGY+RPE PVPGDCGY+LHAH +V  HP+TNE+ +I+AP
Sbjct: 315  LMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNELIKITAP 362


>ref|XP_009803600.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Nicotiana
            sylvestris]
          Length = 384

 Score =  511 bits (1317), Expect = e-178
 Identities = 255/354 (72%), Positives = 293/354 (82%), Gaps = 2/354 (0%)
 Frame = +2

Query: 194  ATKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQIT 373
            A +   FGE W EFNDG+ Y D++R  DAG TLI+FYSRKYKSSAPL GWLQRI NKQIT
Sbjct: 13   AAETAYFGETWREFNDGLTYHDIVRRIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQIT 72

Query: 374  IDGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGL 553
            +DG VVT P   LR G ELVYHRLPW+EPDAPYLL++L+EDN +IALNKPSGLQVLPGGL
Sbjct: 73   VDGKVVTIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDNYLIALNKPSGLQVLPGGL 132

Query: 554  FQQRTVLTQLQRHADNLT--ASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFA 727
            FQQRTVLTQLQ H   LT  +SG ++ HPVPVHRLGRGTSG+LLCAKTK+AKSRLAA+FA
Sbjct: 133  FQQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFA 192

Query: 728  DGTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVA 907
            +GTS V   +  +++ K  R I+K+YRAL SGVI  DEV I QPIG +KYPGVAKGLYVA
Sbjct: 193  EGTSVVED-KYTNSECKKMRKISKIYRALVSGVIDMDEVVIKQPIGTIKYPGVAKGLYVA 251

Query: 908  SPSGKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQP 1087
            SPSGKPALS V VLER+L +NSTLVQVEIQSGRPHQIRIHLSFIG PL+GDPLY + GQP
Sbjct: 252  SPSGKPALSSVRVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQP 311

Query: 1088 KFSDHESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAP 1249
            K  D E +DESF +DGGY+RPE PVPGDCGY+LHAH +V  HP+TNE+ +I+AP
Sbjct: 312  KCFDPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNELIQITAP 365


>ref|XP_009589060.1| PREDICTED: RNA pseudouridine synthase 5 isoform X5 [Nicotiana
            tomentosiformis]
          Length = 386

 Score =  510 bits (1314), Expect = e-178
 Identities = 255/353 (72%), Positives = 293/353 (83%), Gaps = 7/353 (1%)
 Frame = +2

Query: 212  FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 391
            FGEPWPEFNDG+ Y D++RP DAG TLI+FYSRKYKSSAPL GWLQRI NKQIT+D  VV
Sbjct: 16   FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 392  TDPKIIL-----RGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 556
            T P   L     R G ELVYHRLPW+EPDAPYLL++L+ED+ +IALNKPSGLQVLPGGLF
Sbjct: 76   TIPDTELSFWMSRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLF 135

Query: 557  QQRTVLTQLQRHADNLT--ASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFAD 730
            QQRTVLTQLQ H   LT  +SG ++ HPVPVHRLGRGTSG+LLCAKTK+AKSRLAA+FA+
Sbjct: 136  QQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAE 195

Query: 731  GTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVAS 910
            GTS V   +  +++ K  R I+K+YRAL SGVI  DEV I QPIG +KYPGVAKGLYVAS
Sbjct: 196  GTSVVED-KYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVAS 254

Query: 911  PSGKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPK 1090
            PSGKPALS V VLER+L +NSTLVQVEIQSGRPHQIRIHLSFIG PL+GDPLY + GQPK
Sbjct: 255  PSGKPALSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPK 314

Query: 1091 FSDHESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAP 1249
              D E +DESF +DGGY+RPE PVPGDCGY+LHAH +V  HP+TNE+ +I+AP
Sbjct: 315  CFDPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNELIKITAP 367


>ref|XP_004496322.1| PREDICTED: RNA pseudouridine synthase 5 [Cicer arietinum]
          Length = 368

 Score =  509 bits (1310), Expect = e-178
 Identities = 246/352 (69%), Positives = 292/352 (82%), Gaps = 1/352 (0%)
 Frame = +2

Query: 197  TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 376
            ++    G PWPE NDG+ Y D++RPSDAG TLI+FYS KYKSSAPL GWLQRI + QIT+
Sbjct: 2    SRQKKIGVPWPELNDGLSYNDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITV 61

Query: 377  DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 556
            D  VVTDP  +LR G +LVYHRLPWKEPDAP+ +++LYED+D+IALNKPSGLQVLPGGLF
Sbjct: 62   DAKVVTDPNTLLRAGSKLVYHRLPWKEPDAPHTIQVLYEDDDIIALNKPSGLQVLPGGLF 121

Query: 557  QQRTVLTQLQRHADN-LTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADG 733
            QQRTVLTQLQ   +N  T   +Q+PHPVPVHRLGRGTSG+LLCAKTK+A+  LA++FADG
Sbjct: 122  QQRTVLTQLQWETNNKCTFEAHQKPHPVPVHRLGRGTSGILLCAKTKLARVHLASYFADG 181

Query: 734  TSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASP 913
            TS +G  R  DT Q+  + I K+YRAL SG+I  D+V IDQPIG+VKYPGVAKGLYVAS 
Sbjct: 182  TSRIGGKR--DTNQELGK-IAKIYRALVSGIIDNDKVTIDQPIGMVKYPGVAKGLYVASQ 238

Query: 914  SGKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKF 1093
            SGKPALS V +LERN+  NSTLVQV+IQSGRPHQIRIHLSFIGHPL+GDPLY+  GQPK 
Sbjct: 239  SGKPALSVVDILERNVKENSTLVQVKIQSGRPHQIRIHLSFIGHPLIGDPLYAVGGQPKC 298

Query: 1094 SDHESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAP 1249
             D++ +D+SFA+DGGY RP KPVPGDCGY+LHAH ++ +HP+TNEI EI AP
Sbjct: 299  LDYDFLDDSFAEDGGYPRPPKPVPGDCGYYLHAHELLLTHPITNEIIEIIAP 350


>ref|XP_009589057.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 436

 Score =  510 bits (1314), Expect = e-177
 Identities = 252/341 (73%), Positives = 287/341 (84%), Gaps = 2/341 (0%)
 Frame = +2

Query: 212  FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 391
            FGEPWPEFNDG+ Y D++RP DAG TLI+FYSRKYKSSAPL GWLQRI NKQIT+D  VV
Sbjct: 16   FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 392  TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 571
            T P   LR G ELVYHRLPW+EPDAPYLL++L+ED+ +IALNKPSGLQVLPGGLFQQRTV
Sbjct: 76   TIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLFQQRTV 135

Query: 572  LTQLQRHADNLT--ASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 745
            LTQLQ H   LT  +SG ++ HPVPVHRLGRGTSG+LLCAKTK+AKSRLAA+FA+GTS V
Sbjct: 136  LTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAEGTSVV 195

Query: 746  GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 925
               +  +++ K  R I+K+YRAL SGVI  DEV I QPIG +KYPGVAKGLYVASPSGKP
Sbjct: 196  ED-KYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVASPSGKP 254

Query: 926  ALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHE 1105
            ALS V VLER+L +NSTLVQVEIQSGRPHQIRIHLSFIG PL+GDPLY + GQPK  D E
Sbjct: 255  ALSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKCFDPE 314

Query: 1106 SVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNE 1228
             +DESF +DGGY+RPE PVPGDCGY+LHAH +V  HP+TNE
Sbjct: 315  LMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNE 355


>ref|XP_009589063.1| PREDICTED: RNA pseudouridine synthase 5 isoform X7 [Nicotiana
            tomentosiformis]
          Length = 367

 Score =  506 bits (1302), Expect = e-176
 Identities = 253/347 (72%), Positives = 288/347 (82%), Gaps = 7/347 (2%)
 Frame = +2

Query: 212  FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 391
            FGEPWPEFNDG+ Y D++RP DAG TLI+FYSRKYKSSAPL GWLQRI NKQIT+D  VV
Sbjct: 16   FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 392  TDPKIIL-----RGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 556
            T P   L     R G ELVYHRLPW+EPDAPYLL++L+ED+ +IALNKPSGLQVLPGGLF
Sbjct: 76   TIPDTELSFWMSRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLF 135

Query: 557  QQRTVLTQLQRHADNLT--ASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFAD 730
            QQRTVLTQLQ H   LT  +SG ++ HPVPVHRLGRGTSG+LLCAKTK+AKSRLAA+FA+
Sbjct: 136  QQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAE 195

Query: 731  GTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVAS 910
            GTS V   +  +++ K  R I+K+YRAL SGVI  DEV I QPIG +KYPGVAKGLYVAS
Sbjct: 196  GTSVVED-KYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVAS 254

Query: 911  PSGKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPK 1090
            PSGKPALS V VLER+L +NSTLVQVEIQSGRPHQIRIHLSFIG PL+GDPLY + GQPK
Sbjct: 255  PSGKPALSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPK 314

Query: 1091 FSDHESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEI 1231
              D E +DESF +DGGY+RPE PVPGDCGY+LHAH +V  HP+TNEI
Sbjct: 315  CFDPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNEI 361


>ref|XP_010658419.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Vitis vinifera]
          Length = 393

 Score =  506 bits (1304), Expect = e-176
 Identities = 244/348 (70%), Positives = 290/348 (83%), Gaps = 1/348 (0%)
 Frame = +2

Query: 209  SFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCV 388
            +FG PWP+FNDG+ Y D++  SD+  TLID+YS K+K+SAPL GWLQRI+  QIT+DG V
Sbjct: 4    TFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGTV 63

Query: 389  VTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRT 568
            VT+PK ILR G +LVYHRLPW+EPDAPYLLEILYED+DVIALNKPSGLQVLPGGLFQQRT
Sbjct: 64   VTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRT 123

Query: 569  VLTQLQRHADNLTA-SGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 745
            VLTQLQ  A+   +    QE H VPVHRLGRGTSG+LLCAKTK+AK+RLAA+FADGTS V
Sbjct: 124  VLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVV 183

Query: 746  GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 925
            G  R  D + +  R I+K+YRAL +G++ +DE+ I+QPIG+V+YPGVAKGLYVASPSGKP
Sbjct: 184  GGNRDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGKP 243

Query: 926  ALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHE 1105
            ALSKV +LER++  +  +VQVEIQSGRPHQIRIHLSFIGHPL+GDPLY   GQPK  D E
Sbjct: 244  ALSKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDAE 303

Query: 1106 SVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAP 1249
              +ES+A DGGY+RP KPVPGDCGYHLHAH +V SHP TNE+ +I+AP
Sbjct: 304  FTNESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNEVIKITAP 351


>ref|XP_003591952.2| pseudouridine synthase Rlu family protein [Medicago truncatula]
            gi|657404949|gb|AES62203.2| pseudouridine synthase Rlu
            family protein [Medicago truncatula]
          Length = 370

 Score =  505 bits (1300), Expect = e-176
 Identities = 248/346 (71%), Positives = 288/346 (83%), Gaps = 1/346 (0%)
 Frame = +2

Query: 215  GEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVVT 394
            G PWPEFNDG+ Y D++RPSDAG TLI+FYS KYKSSAPL GWLQRI + QIT+D  VVT
Sbjct: 8    GIPWPEFNDGLSYDDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITLDARVVT 67

Query: 395  DPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTVL 574
            DP  ILR G +LVYHR+PWKEPDAP+ +E+LYED+D+IALNKPSGLQVLPGGLFQQRTVL
Sbjct: 68   DPNTILRVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVL 127

Query: 575  TQLQRHADNL-TASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVGV 751
            TQLQ   +N  T   +Q+PHPVPVHRLGRGTSG+LLCAKTK+A++RLA++FADGTS +  
Sbjct: 128  TQLQWETNNKSTIEAHQKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSRIE- 186

Query: 752  CRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPAL 931
                 T Q+  + I K+YRAL SG+I  D+V I+QPIG+VKYPGVAKGLYVAS SGKPAL
Sbjct: 187  -GKGHTNQELGK-IAKIYRALVSGIINNDQVTINQPIGMVKYPGVAKGLYVASQSGKPAL 244

Query: 932  SKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESV 1111
            S V VLERN+  NSTLVQV+IQSGRPHQIRIHLSFIGHPL+GDPLY+  GQPK  D + +
Sbjct: 245  SVVHVLERNVKENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCDFL 304

Query: 1112 DESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAP 1249
            DESFA+DGGY RP KPVPGDCGYHLHAH +  SHP+TNEI E+ AP
Sbjct: 305  DESFAEDGGYTRPSKPVPGDCGYHLHAHRLFLSHPITNEIIEMIAP 350


>ref|XP_012452101.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Gossypium
            raimondii] gi|763800749|gb|KJB67704.1| hypothetical
            protein B456_010G204900 [Gossypium raimondii]
          Length = 382

 Score =  505 bits (1301), Expect = e-176
 Identities = 246/353 (69%), Positives = 287/353 (81%), Gaps = 2/353 (0%)
 Frame = +2

Query: 197  TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 376
            T+ + FG PWPE NDG++Y D++  SD+  TLIDFYSRKYK+SAPL GWLQRI N QI++
Sbjct: 7    TQSLVFGIPWPELNDGLFYSDVVPHSDSELTLIDFYSRKYKNSAPLQGWLQRIQNGQISV 66

Query: 377  DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 556
            DG VV DP  IL G   LVYHRLPWKEPD P+LLE+LYED+D++ALNKPSGLQVLPGGLF
Sbjct: 67   DGRVVKDPNTILSGDSVLVYHRLPWKEPDVPHLLEVLYEDDDMVALNKPSGLQVLPGGLF 126

Query: 557  QQRTVLTQL--QRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFAD 730
            QQRTVLTQL       N T +  QE HPVPVHRLGRGTSG+LLCAKTK+AK+RLAA+FAD
Sbjct: 127  QQRTVLTQLCWSVKKQNSTLNS-QETHPVPVHRLGRGTSGILLCAKTKVAKTRLAAYFAD 185

Query: 731  GTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVAS 910
            GTS VG        +  TR I+K+YRAL +G++++D+V IDQPIG+V+YPGVAKGLYVAS
Sbjct: 186  GTSLVGATSNRKAARSGTRKISKIYRALVTGILVDDKVIIDQPIGIVRYPGVAKGLYVAS 245

Query: 911  PSGKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPK 1090
            PSGKPALSKV VLER+   N TLVQVEI+SGRPHQIRIHLSFIGHPL+GDPLY   G+P+
Sbjct: 246  PSGKPALSKVEVLERDEKQNCTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYIAGGEPR 305

Query: 1091 FSDHESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAP 1249
              D E VDESFAQDGGY+RP  PVPGDCGY+LHAH +V SHP TNE+  I+AP
Sbjct: 306  CFDPELVDESFAQDGGYQRPTNPVPGDCGYYLHAHRLVLSHPTTNEMIYITAP 358


>ref|XP_011084350.1| PREDICTED: RNA pseudouridine synthase 5 isoform X3 [Sesamum indicum]
          Length = 288

 Score =  501 bits (1289), Expect = e-176
 Identities = 245/284 (86%), Positives = 262/284 (92%)
 Frame = +2

Query: 203  MVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDG 382
            MVSFGEPWPEFNDGIYYRDL+R S +GATLI+FYSRKY+SSAPLHGWLQRIHNKQITIDG
Sbjct: 1    MVSFGEPWPEFNDGIYYRDLVRASGSGATLIEFYSRKYESSAPLHGWLQRIHNKQITIDG 60

Query: 383  CVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 562
            C+ TDP  ILR G ELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ
Sbjct: 61   CLATDPNTILREGAELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 120

Query: 563  RTVLTQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSA 742
            RTVLTQLQ  A NLT SG QE HPVPVHRLGRGTSG+LLCAKTK+AKSRLAAFFADGTS 
Sbjct: 121  RTVLTQLQLRAGNLTTSGCQEAHPVPVHRLGRGTSGILLCAKTKLAKSRLAAFFADGTSN 180

Query: 743  VGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGK 922
            VG+ R ND QQKA R+ITK+YRAL SG+IIEDE+ I+QPIGLV+YPGVAKGLYVASPSGK
Sbjct: 181  VGIYRRNDPQQKAGRSITKIYRALVSGIIIEDEIIIEQPIGLVRYPGVAKGLYVASPSGK 240

Query: 923  PALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLV 1054
            PALSKVVVLER++L  STLVQVEIQSGRPHQIRIH+SFIGHPLV
Sbjct: 241  PALSKVVVLERDMLRKSTLVQVEIQSGRPHQIRIHVSFIGHPLV 284


>ref|XP_011084349.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Sesamum indicum]
          Length = 301

 Score =  501 bits (1289), Expect = e-176
 Identities = 245/284 (86%), Positives = 262/284 (92%)
 Frame = +2

Query: 203  MVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDG 382
            MVSFGEPWPEFNDGIYYRDL+R S +GATLI+FYSRKY+SSAPLHGWLQRIHNKQITIDG
Sbjct: 1    MVSFGEPWPEFNDGIYYRDLVRASGSGATLIEFYSRKYESSAPLHGWLQRIHNKQITIDG 60

Query: 383  CVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 562
            C+ TDP  ILR G ELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ
Sbjct: 61   CLATDPNTILREGAELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 120

Query: 563  RTVLTQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSA 742
            RTVLTQLQ  A NLT SG QE HPVPVHRLGRGTSG+LLCAKTK+AKSRLAAFFADGTS 
Sbjct: 121  RTVLTQLQLRAGNLTTSGCQEAHPVPVHRLGRGTSGILLCAKTKLAKSRLAAFFADGTSN 180

Query: 743  VGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGK 922
            VG+ R ND QQKA R+ITK+YRAL SG+IIEDE+ I+QPIGLV+YPGVAKGLYVASPSGK
Sbjct: 181  VGIYRRNDPQQKAGRSITKIYRALVSGIIIEDEIIIEQPIGLVRYPGVAKGLYVASPSGK 240

Query: 923  PALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLV 1054
            PALSKVVVLER++L  STLVQVEIQSGRPHQIRIH+SFIGHPLV
Sbjct: 241  PALSKVVVLERDMLRKSTLVQVEIQSGRPHQIRIHVSFIGHPLV 284


>gb|KYP74712.1| RNA pseudourine synthase 5 [Cajanus cajan]
          Length = 371

 Score =  503 bits (1295), Expect = e-175
 Identities = 243/347 (70%), Positives = 289/347 (83%), Gaps = 1/347 (0%)
 Frame = +2

Query: 212  FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 391
            FG PWP+ NDG+ Y D++ PSDAG TL+ FYS  YKSSAPL GWLQRI + QIT+DG VV
Sbjct: 7    FGIPWPDCNDGLSYDDVVSPSDAGLTLLQFYSTNYKSSAPLQGWLQRIKSGQITVDGSVV 66

Query: 392  TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 571
            TD   +LR   +LVYHRLPWKEP+AP+++E+LYED+D+IALNKPSGLQVLPGGLFQQRTV
Sbjct: 67   TDSDTVLRVASKLVYHRLPWKEPEAPHMIEVLYEDDDMIALNKPSGLQVLPGGLFQQRTV 126

Query: 572  LTQLQRHADNL-TASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVG 748
            LTQLQ   +N  +   ++ PHPVPVHRLGRGTSG+LLCAKTK+A++RLA++FADGTS +G
Sbjct: 127  LTQLQWECNNQGSCEMHKRPHPVPVHRLGRGTSGILLCAKTKVARARLASYFADGTSHIG 186

Query: 749  VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 928
            V R  DT QK  + I K+YRAL SG++  D++ I+QPIG+VKYPGVAKGLYVAS SGKPA
Sbjct: 187  VKR--DTNQKIGK-IAKIYRALVSGIVENDKMTINQPIGIVKYPGVAKGLYVASQSGKPA 243

Query: 929  LSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHES 1108
            LS V +LERN+  NSTLVQV+IQSGRPHQIRIHLSFIGHPL+GDPLY  DGQPK  D + 
Sbjct: 244  LSAVEILERNIQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYGVDGQPKCLDCDF 303

Query: 1109 VDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAP 1249
            +DESFA+DGGY+RP KPVPGDCGYHLHAH +  SHP+TNE+ EI AP
Sbjct: 304  IDESFAEDGGYQRPTKPVPGDCGYHLHAHKLFLSHPITNELVEIIAP 350


>ref|XP_009803599.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Nicotiana
            sylvestris]
          Length = 393

 Score =  504 bits (1297), Expect = e-175
 Identities = 255/363 (70%), Positives = 293/363 (80%), Gaps = 11/363 (3%)
 Frame = +2

Query: 194  ATKMVSFGEPWPEFNDGIYYRDLLRPSDAG---------ATLIDFYSRKYKSSAPLHGWL 346
            A +   FGE W EFNDG+ Y D++R  DAG          TLI+FYSRKYKSSAPL GWL
Sbjct: 13   AAETAYFGETWREFNDGLTYHDIVRRIDAGFLFCAKSTGLTLIEFYSRKYKSSAPLQGWL 72

Query: 347  QRIHNKQITIDGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPS 526
            QRI NKQIT+DG VVT P   LR G ELVYHRLPW+EPDAPYLL++L+EDN +IALNKPS
Sbjct: 73   QRIQNKQITVDGKVVTIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDNYLIALNKPS 132

Query: 527  GLQVLPGGLFQQRTVLTQLQRHADNLT--ASGYQEPHPVPVHRLGRGTSGVLLCAKTKIA 700
            GLQVLPGGLFQQRTVLTQLQ H   LT  +SG ++ HPVPVHRLGRGTSG+LLCAKTK+A
Sbjct: 133  GLQVLPGGLFQQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLA 192

Query: 701  KSRLAAFFADGTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYP 880
            KSRLAA+FA+GTS V   +  +++ K  R I+K+YRAL SGVI  DEV I QPIG +KYP
Sbjct: 193  KSRLAAYFAEGTSVVED-KYTNSECKKMRKISKIYRALVSGVIDMDEVVIKQPIGTIKYP 251

Query: 881  GVAKGLYVASPSGKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGD 1060
            GVAKGLYVASPSGKPALS V VLER+L +NSTLVQVEIQSGRPHQIRIHLSFIG PL+GD
Sbjct: 252  GVAKGLYVASPSGKPALSSVRVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGD 311

Query: 1061 PLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEI 1240
            PLY + GQPK  D E +DESF +DGGY+RPE PVPGDCGY+LHAH +V  HP+TNE+ +I
Sbjct: 312  PLYVSGGQPKCFDPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNELIQI 371

Query: 1241 SAP 1249
            +AP
Sbjct: 372  TAP 374


>gb|KHG01532.1| hypothetical protein F383_21699 [Gossypium arboreum]
          Length = 382

 Score =  503 bits (1294), Expect = e-175
 Identities = 243/353 (68%), Positives = 288/353 (81%), Gaps = 2/353 (0%)
 Frame = +2

Query: 197  TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 376
            T+ + FG PWPE N+G++Y D++  SD+  TLIDFYSRKYK+SAP+ GWLQRI N QI++
Sbjct: 7    TQSLVFGIPWPELNEGLFYSDVVPHSDSELTLIDFYSRKYKNSAPIQGWLQRIQNGQISV 66

Query: 377  DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 556
            DG VV DP  IL G   LVYHRLPWKEPD P+LLE+LYED+D++ALNKPSGLQVLPGGLF
Sbjct: 67   DGRVVKDPNTILSGDSVLVYHRLPWKEPDVPHLLEVLYEDDDMVALNKPSGLQVLPGGLF 126

Query: 557  QQRTVLTQL--QRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFAD 730
            QQRTVLTQL       N T +  QE HPVPVHRLGRGTSG+LLCAKTK+AK+RLAA+FAD
Sbjct: 127  QQRTVLTQLCWSVKKQNSTLNS-QETHPVPVHRLGRGTSGILLCAKTKVAKTRLAAYFAD 185

Query: 731  GTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVAS 910
            GTS VG       ++  TR I+K+YRAL +G++++D+V IDQPIG+V+YPGVA+GLYVAS
Sbjct: 186  GTSRVGATSNRKAERSGTRKISKIYRALVTGILVDDKVIIDQPIGIVRYPGVARGLYVAS 245

Query: 911  PSGKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPK 1090
            PSGKPALSKV VLER+   N TLVQVEI+SGRPHQIRIHLSFIGHPL+GDPLY   GQP+
Sbjct: 246  PSGKPALSKVEVLERDEKQNCTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYIAGGQPR 305

Query: 1091 FSDHESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAP 1249
              D E VDESFAQDGGY+RP  PVPGDCGY+LHA+ +V SHP TNE+  I+AP
Sbjct: 306  CFDPELVDESFAQDGGYQRPTNPVPGDCGYYLHAYQLVLSHPTTNEMISITAP 358


>ref|XP_009589056.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 441

 Score =  504 bits (1298), Expect = e-175
 Identities = 252/346 (72%), Positives = 287/346 (82%), Gaps = 7/346 (2%)
 Frame = +2

Query: 212  FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 391
            FGEPWPEFNDG+ Y D++RP DAG TLI+FYSRKYKSSAPL GWLQRI NKQIT+D  VV
Sbjct: 16   FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 392  TDPKIIL-----RGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 556
            T P   L     R G ELVYHRLPW+EPDAPYLL++L+ED+ +IALNKPSGLQVLPGGLF
Sbjct: 76   TIPDTELSFWMSRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLF 135

Query: 557  QQRTVLTQLQRHADNLT--ASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFAD 730
            QQRTVLTQLQ H   LT  +SG ++ HPVPVHRLGRGTSG+LLCAKTK+AKSRLAA+FA+
Sbjct: 136  QQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAE 195

Query: 731  GTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVAS 910
            GTS V   +  +++ K  R I+K+YRAL SGVI  DEV I QPIG +KYPGVAKGLYVAS
Sbjct: 196  GTSVVED-KYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVAS 254

Query: 911  PSGKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPK 1090
            PSGKPALS V VLER+L +NSTLVQVEIQSGRPHQIRIHLSFIG PL+GDPLY + GQPK
Sbjct: 255  PSGKPALSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPK 314

Query: 1091 FSDHESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNE 1228
              D E +DESF +DGGY+RPE PVPGDCGY+LHAH +V  HP+TNE
Sbjct: 315  CFDPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNE 360


>emb|CBI31488.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  500 bits (1287), Expect = e-174
 Identities = 241/341 (70%), Positives = 284/341 (83%), Gaps = 1/341 (0%)
 Frame = +2

Query: 209  SFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCV 388
            +FG PWP+FNDG+ Y D++  SD+  TLID+YS K+K+SAPL GWLQRI+  QIT+DG V
Sbjct: 4    TFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGTV 63

Query: 389  VTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRT 568
            VT+PK ILR G +LVYHRLPW+EPDAPYLLEILYED+DVIALNKPSGLQVLPGGLFQQRT
Sbjct: 64   VTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRT 123

Query: 569  VLTQLQRHADNLTA-SGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 745
            VLTQLQ  A+   +    QE H VPVHRLGRGTSG+LLCAKTK+AK+RLAA+FADGTS V
Sbjct: 124  VLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVV 183

Query: 746  GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 925
            G  R  D + +  R I+K+YRAL +G++ +DE+ I+QPIG+V+YPGVAKGLYVASPSGKP
Sbjct: 184  GGNRDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGKP 243

Query: 926  ALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHE 1105
            ALSKV +LER++  +  +VQVEIQSGRPHQIRIHLSFIGHPL+GDPLY   GQPK  D E
Sbjct: 244  ALSKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDAE 303

Query: 1106 SVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNE 1228
              +ES+A DGGY+RP KPVPGDCGYHLHAH +V SHP TNE
Sbjct: 304  FTNESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNE 344


>ref|XP_015942620.1| PREDICTED: RNA pseudouridine synthase 5 [Arachis duranensis]
          Length = 363

 Score =  499 bits (1285), Expect = e-174
 Identities = 245/347 (70%), Positives = 286/347 (82%), Gaps = 1/347 (0%)
 Frame = +2

Query: 212  FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 391
            FG PWPEFNDG+ Y D++ P D G TLI FYS KYKSSAPL GWLQRI NKQIT+DG VV
Sbjct: 11   FGCPWPEFNDGLIYHDVVPPPDDGLTLIQFYSSKYKSSAPLQGWLQRIKNKQITVDGSVV 70

Query: 392  TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 571
            TDP  +LR G +LVYHRLPWKEPDAPY+LE+LYED+D+IALNKPSGLQVLPGGLFQQRTV
Sbjct: 71   TDPDAVLRVGSKLVYHRLPWKEPDAPYILEVLYEDDDMIALNKPSGLQVLPGGLFQQRTV 130

Query: 572  LTQLQRHADNL-TASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVG 748
            LTQL+  A+   T   +Q  H VPVHRLGRGTSG+LLCAKTK+AK+RLA++FADGTS +G
Sbjct: 131  LTQLKWEANKQSTVKAHQRLHSVPVHRLGRGTSGLLLCAKTKLAKARLASYFADGTSQIG 190

Query: 749  VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 928
              R  DT ++  + I K+YRAL SG++  D+V I+QPIG+VKYPGVA GLYVAS SGKPA
Sbjct: 191  GKR--DTNKEHGK-IAKIYRALVSGIVDNDKVIINQPIGIVKYPGVATGLYVASESGKPA 247

Query: 929  LSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHES 1108
            LS V VLER +  N+TLVQV+I+SGRPHQIRIHLSFIGHPL+GDPLY+  GQPK  D + 
Sbjct: 248  LSIVNVLERGVQGNNTLVQVQIESGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCDV 307

Query: 1109 VDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAP 1249
            +DE FA DGGYERP KPVPGDCGY+LHAH ++ SHP+TNE+ EI AP
Sbjct: 308  IDERFAADGGYERPTKPVPGDCGYYLHAHQLIISHPVTNEVIEIIAP 354


>ref|XP_007009784.1| Pseudouridine synthase family protein [Theobroma cacao]
            gi|508726697|gb|EOY18594.1| Pseudouridine synthase family
            protein [Theobroma cacao]
          Length = 378

 Score =  499 bits (1286), Expect = e-174
 Identities = 242/352 (68%), Positives = 286/352 (81%), Gaps = 1/352 (0%)
 Frame = +2

Query: 197  TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 376
            T+ + FG PWPE NDG++Y D+++PSD+  TLI+FYS KYK+SAP  GWLQRI N QI++
Sbjct: 7    TQSLVFGLPWPELNDGLFYDDVIKPSDSELTLIEFYSSKYKNSAPSQGWLQRIQNGQISV 66

Query: 377  DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 556
            DG VV DP  ILRG  ELVYHRLPWKEPDAP+ LE+LYED+D+IALNKPSGLQVLPGGLF
Sbjct: 67   DGRVVRDPNTILRGSSELVYHRLPWKEPDAPHALEVLYEDDDMIALNKPSGLQVLPGGLF 126

Query: 557  QQRTVLTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADG 733
            QQRTVLTQL       T+S   QE HPVPVHRLGRGTSG+LLCAKTK AK+ LAA+FADG
Sbjct: 127  QQRTVLTQLSWRMRKQTSSLASQESHPVPVHRLGRGTSGILLCAKTKAAKTCLAAYFADG 186

Query: 734  TSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASP 913
            TS +G       Q   TR I+K+YRAL +G++ ED+V I+QPIG+V+YPGVAKGLYVASP
Sbjct: 187  TSLIGANSNRKMQPSCTRKISKIYRALVTGILGEDKVVINQPIGIVQYPGVAKGLYVASP 246

Query: 914  SGKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKF 1093
            SGKPALSKV VLE++   N TLVQV+I+SGRPHQIRIHLSFIGHPL+GDPLY   GQP+ 
Sbjct: 247  SGKPALSKVEVLEKDEQQNHTLVQVQIESGRPHQIRIHLSFIGHPLLGDPLYIAGGQPRC 306

Query: 1094 SDHESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAP 1249
             D E VDE++AQDGGY+RP  PVPGDCGY+LHAH ++ SHP T+EI  I+AP
Sbjct: 307  FDSEFVDENYAQDGGYQRPVNPVPGDCGYYLHAHRLLLSHPTTDEIINITAP 358