BLASTX nr result
ID: Rehmannia27_contig00021796
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00021796
(2125 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012830213.1| PREDICTED: 30-kDa cleavage and polyadenylati... 662 0.0
ref|XP_011085214.1| PREDICTED: 30-kDa cleavage and polyadenylati... 657 0.0
ref|XP_011096672.1| PREDICTED: 30-kDa cleavage and polyadenylati... 651 0.0
ref|XP_012827554.1| PREDICTED: 30-kDa cleavage and polyadenylati... 646 0.0
ref|XP_002281594.1| PREDICTED: 30-kDa cleavage and polyadenylati... 612 0.0
ref|XP_012436534.1| PREDICTED: 30-kDa cleavage and polyadenylati... 611 0.0
ref|XP_007041140.1| Cleavage and polyadenylation specificity fac... 610 0.0
ref|XP_015382577.1| PREDICTED: 30-kDa cleavage and polyadenylati... 610 0.0
ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citr... 607 0.0
gb|KJB47903.1| hypothetical protein B456_008G046800 [Gossypium r... 607 0.0
ref|XP_003546247.1| PREDICTED: 30-kDa cleavage and polyadenylati... 603 0.0
gb|KYP39096.1| Cleavage and polyadenylation specificity factor C... 599 0.0
dbj|BAT87667.1| hypothetical protein VIGAN_05105800 [Vigna angul... 600 0.0
ref|XP_012569987.1| PREDICTED: 30-kDa cleavage and polyadenylati... 600 0.0
ref|XP_007147504.1| hypothetical protein PHAVU_006G130200g [Phas... 599 0.0
ref|XP_014518648.1| PREDICTED: 30-kDa cleavage and polyadenylati... 598 0.0
ref|XP_010687042.1| PREDICTED: 30-kDa cleavage and polyadenylati... 598 0.0
ref|XP_010092677.1| Cleavage and polyadenylation specificity fac... 597 0.0
ref|XP_015882698.1| PREDICTED: 30-kDa cleavage and polyadenylati... 597 0.0
ref|XP_002523201.1| PREDICTED: 30-kDa cleavage and polyadenylati... 597 0.0
>ref|XP_012830213.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30
[Erythranthe guttata] gi|604344484|gb|EYU43238.1|
hypothetical protein MIMGU_mgv1a002387mg [Erythranthe
guttata]
Length = 681
Score = 662 bits (1709), Expect = 0.0
Identities = 322/441 (73%), Positives = 349/441 (79%), Gaps = 5/441 (1%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHTNED+
Sbjct: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTNEDV 129
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNGPDCRYRHAKLPGPPP VEE+LQKIQQLTSYN+G
Sbjct: 130 KECNMYKLGFCPNGPDCRYRHAKLPGPPPSVEEVLQKIQQLTSYNYGKSNNFFQNRNSNF 189
Query: 391 XX-TEKPQFPQGPNGTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQNQ 567
TEKPQFPQGPNGT+QVGKT+ E GN+ + ++ N QQNQ
Sbjct: 190 AQQTEKPQFPQGPNGTHQVGKTNAAEPGNL----NQPAQQSQQPGSQGQLQSIPNDQQNQ 245
Query: 568 ASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIFS 747
ASR ATPLPQG SRYFVVKSCN ENLELSVQQGVWATQRSNEAKLNEAFESV+N+ILIFS
Sbjct: 246 ASRNATPLPQGASRYFVVKSCNRENLELSVQQGVWATQRSNEAKLNEAFESVENIILIFS 305
Query: 748 VNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRNP 927
VNKTRHFQGCAKMTSRIGG VGGGNWKHA+GTAHYGRNFA+KWLKL EL+F+KTRHLRNP
Sbjct: 306 VNKTRHFQGCAKMTSRIGGSVGGGNWKHAHGTAHYGRNFALKWLKLCELTFDKTRHLRNP 365
Query: 928 FNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLENA 1107
+NENLPVKISRDCQELEPS+GEQLASLLYLEPDSDLMA+++ GV+++N
Sbjct: 366 YNENLPVKISRDCQELEPSIGEQLASLLYLEPDSDLMAIAIAAELKREEEKAKGVNIDNG 425
Query: 1108 SENPDIVPFXXXXXXXXXXXXXXXXXXXXAL-GQAF---GRGRGRGMMWAPHMPPLARGP 1275
+ENPDIVPF GQAF GRG GRGMMW PHMPPL RGP
Sbjct: 426 AENPDIVPFEDNEEEEEEEEEEEESEDEDEFPGQAFGAQGRGVGRGMMWGPHMPPLGRGP 485
Query: 1276 RPFQGMRGFPPNLTGPDGFPY 1338
RPF G+RGFPPN+ G DGFPY
Sbjct: 486 RPFPGVRGFPPNMMGGDGFPY 506
Score = 79.0 bits (193), Expect = 1e-11
Identities = 48/85 (56%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +1
Query: 1600 NRPKRDQKAPNGDRKDGEMGGSAGGPGDE--SQYQQRGKAQRQEDRYSAGNGNRNDESES 1773
N KRDQKAP DR D S G G E S RG A ++E+ Y RNDESES
Sbjct: 604 NWVKRDQKAPYSDRNDV----SDQGKGQEIVSGSSNRGNAAKREESY------RNDESES 653
Query: 1774 EDEAPRRSRHGEGKKKRRSLEADSN 1848
EDEAPRRSRHGEGKKKRR EA+++
Sbjct: 654 EDEAPRRSRHGEGKKKRRGSEAETD 678
>ref|XP_011085214.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Sesamum indicum]
Length = 688
Score = 657 bits (1696), Expect = 0.0
Identities = 328/437 (75%), Positives = 342/437 (78%), Gaps = 1/437 (0%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 68 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 127
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQQLTSYNHG
Sbjct: 128 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTSYNHGNTNKFFQNRNTTY 187
Query: 391 XX-TEKPQFPQGPNGTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQNQ 567
TEK Q PQGPNG NQ GKT+ ES N+ I N QQNQ
Sbjct: 188 TQQTEKTQLPQGPNGVNQAGKTNPIESSNI--NQQAQVQQSQQQGSQGQIQNTPGGQQNQ 245
Query: 568 ASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIFS 747
ASRTATPLPQGTSRYFVVKSCN ENLELSVQQGVWATQRSNEAKLNEAFESV+NVILIFS
Sbjct: 246 ASRTATPLPQGTSRYFVVKSCNRENLELSVQQGVWATQRSNEAKLNEAFESVENVILIFS 305
Query: 748 VNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRNP 927
VNKTRHFQGCAKMTS+IGG VGGGNWKHA+GTAHYGRNFAVKWLKL ELSF+KTRHL+NP
Sbjct: 306 VNKTRHFQGCAKMTSKIGGSVGGGNWKHAHGTAHYGRNFAVKWLKLCELSFDKTRHLKNP 365
Query: 928 FNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLENA 1107
+NENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSL GV+L+N
Sbjct: 366 YNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLAAELKREEEKAKGVNLDNG 425
Query: 1108 SENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQAFGRGRGRGMMWAPHMPPLARGPRPFQ 1287
+ENPDIVPF G A GRGRGRGMMW PHM PLARG RPF
Sbjct: 426 TENPDIVPFEDNEEEEEEESEEEDESPGQVFG-AQGRGRGRGMMWLPHM-PLARGSRPFS 483
Query: 1288 GMRGFPPNLTGPDGFPY 1338
G+RGFPPN+ DGF Y
Sbjct: 484 GIRGFPPNMMSGDGFSY 500
Score = 111 bits (278), Expect = 6e-22
Identities = 61/89 (68%), Positives = 66/89 (74%), Gaps = 7/89 (7%)
Frame = +1
Query: 1600 NRPKRDQKAPNGDRKDG-------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRN 1758
NR KRD KAP D+ DG E+ GS+GG GDE + R KAQ QED YSAGN RN
Sbjct: 597 NRAKRDLKAPFNDKNDGPDQGKGQEISGSSGGHGDEGRNLPRLKAQ-QEDHYSAGNSYRN 655
Query: 1759 DESESEDEAPRRSRHGEGKKKRRSLEADS 1845
DESESEDEAPRRSRHGEGKKKRR+LEADS
Sbjct: 656 DESESEDEAPRRSRHGEGKKKRRNLEADS 684
>ref|XP_011096672.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Sesamum indicum]
Length = 679
Score = 651 bits (1680), Expect = 0.0
Identities = 331/439 (75%), Positives = 345/439 (78%), Gaps = 3/439 (0%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 68 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 127
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+L+KIQQ +S+N+G
Sbjct: 128 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLRKIQQ-SSHNYGNRFFQNRNANYAQ 186
Query: 391 XXTEKPQFPQGPNGTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQNQA 570
TEK QFPQGPN NQV K S TESGN++ + NL NSQQNQA
Sbjct: 187 Q-TEKSQFPQGPNEANQVAKGSTTESGNLIRPPQGQLSQQTGNQGQ--LQNLPNSQQNQA 243
Query: 571 SRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIFSV 750
SR AT LPQGTSRYFVVKSCN ENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIFSV
Sbjct: 244 SRNATSLPQGTSRYFVVKSCNKENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIFSV 303
Query: 751 NKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRNPF 930
NKTRHFQGCAKMTSRIGG VGGGNWKH +G+AHYGRNFAVKWLKLGELSFNKTRHLRNP+
Sbjct: 304 NKTRHFQGCAKMTSRIGGSVGGGNWKHTHGSAHYGRNFAVKWLKLGELSFNKTRHLRNPY 363
Query: 931 NENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLENAS 1110
NENL VKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSL GV+LEN +
Sbjct: 364 NENLQVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLAAESKREEEKAKGVNLENGN 423
Query: 1111 ENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQAF---GRGRGRGMMWAPHMPPLARGPRP 1281
ENPDIVPF +LGQ F GRGRGRGMMW PHM PLARG R
Sbjct: 424 ENPDIVPF----EENEEEEEDESEEEDESLGQVFGAQGRGRGRGMMWPPHM-PLARGARA 478
Query: 1282 FQGMRGFPPNLTGPDGFPY 1338
F GMRGFPPNL DGF Y
Sbjct: 479 FHGMRGFPPNLVAGDGFSY 497
Score = 118 bits (296), Expect = 4e-24
Identities = 65/91 (71%), Positives = 69/91 (75%), Gaps = 7/91 (7%)
Frame = +1
Query: 1600 NRPKRDQKAPNGDR-------KDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRN 1758
NR KRDQKAP DR KD EM GSAG DE QYQQR K Q +D YSAG+ +RN
Sbjct: 593 NRAKRDQKAPTSDRNEGSAHAKDQEMAGSAG---DEGQYQQRAKVQ--QDHYSAGSSHRN 647
Query: 1759 DESESEDEAPRRSRHGEGKKKRRSLEADSNA 1851
DES+SEDEAPRRSRHGEGKKKRRSLEADSNA
Sbjct: 648 DESDSEDEAPRRSRHGEGKKKRRSLEADSNA 678
>ref|XP_012827554.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like isoform X1 [Erythranthe guttata]
gi|604299195|gb|EYU19130.1| hypothetical protein
MIMGU_mgv1a002535mg [Erythranthe guttata]
Length = 662
Score = 646 bits (1667), Expect = 0.0
Identities = 321/439 (73%), Positives = 340/439 (77%), Gaps = 3/439 (0%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKG+ACGFLHQYDKSRMPVCRFFR YGECREQDCVYKHTN+DI
Sbjct: 68 RRSFRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRQYGECREQDCVYKHTNDDI 127
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KEC+MYKLGFCPNG DCRYRHAKLPGPPPPVEE+LQ+IQQLTSYNHG
Sbjct: 128 KECHMYKLGFCPNGTDCRYRHAKLPGPPPPVEEVLQRIQQLTSYNHGNSNRFQNRNSNFS 187
Query: 391 XXTEKPQFPQGPNGTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQNQA 570
EK QF QG NGTNQ+GK+ +TE+ NVL N NSQQNQA
Sbjct: 188 QQAEKSQFSQGTNGTNQIGKSRITEAANVLQQPQLQQQGSQGQTL-----NPSNSQQNQA 242
Query: 571 SRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIFSV 750
SRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDN+ILIFSV
Sbjct: 243 SRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNIILIFSV 302
Query: 751 NKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRNPF 930
NKTRHFQGCAKMTSRIGG + GGNWK+A+GTAHYG+NF+VKWLKLGELSFNKTRHLRNPF
Sbjct: 303 NKTRHFQGCAKMTSRIGGSISGGNWKNAHGTAHYGQNFSVKWLKLGELSFNKTRHLRNPF 362
Query: 931 NENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLENAS 1110
NENLPVKISRDCQELEPS+GEQLASLLYLEPDSDLMAV+L GV+LEN +
Sbjct: 363 NENLPVKISRDCQELEPSIGEQLASLLYLEPDSDLMAVALAAEAKREEEKAKGVNLENEN 422
Query: 1111 ENPDIVPFXXXXXXXXXXXXXXXXXXXXAL---GQAFGRGRGRGMMWAPHMPPLARGPRP 1281
ENPDI PF QA GRGRG GMMW P M PLARGP
Sbjct: 423 ENPDIAPFEDNEEEEEEEEESEEEDENPGHVFGAQARGRGRGMGMMWPPQM-PLARGPHT 481
Query: 1282 FQGMRGFPPNLTGPDGFPY 1338
F G RGFPPNL G DGF Y
Sbjct: 482 FPGPRGFPPNLMGADGFSY 500
Score = 77.0 bits (188), Expect = 4e-11
Identities = 49/89 (55%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Frame = +1
Query: 1600 NRPKRDQKAP-NGDRKDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGN-----RND 1761
NR KRDQK P N R DG DE Q+GK + GN ND
Sbjct: 583 NRAKRDQKGPTNSYRNDGS---------DE----QQGKVKEAAGDVGQNRGNIIIHGNND 629
Query: 1762 ESESEDEAPRRSRHGEGKKKRRSLEADSN 1848
ESESEDEAPRRSRHGEGKKKRRSLEADS+
Sbjct: 630 ESESEDEAPRRSRHGEGKKKRRSLEADSS 658
>ref|XP_002281594.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30
[Vitis vinifera]
Length = 673
Score = 612 bits (1579), Expect = 0.0
Identities = 306/439 (69%), Positives = 334/439 (76%), Gaps = 3/439 (0%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 57 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 116
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNG DCRYRHAKLPGPPP +EE+ QKIQQL+S+N+G
Sbjct: 117 KECNMYKLGFCPNGSDCRYRHAKLPGPPPTMEEVFQKIQQLSSFNYGSSNRFYQNRNPYN 176
Query: 391 XXTEKPQFPQGPNGTN--QVGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQN 564
TEK Q QG N N V K+S TE+ NV +PN L N
Sbjct: 177 QQTEKSQILQGSNAVNLGTVAKSSTTEAINVQQQQVQPPQQQVSQTPMQNLPNGL---PN 233
Query: 565 QASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIF 744
QA++TA+PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+SV+NVILIF
Sbjct: 234 QANKTASPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIF 293
Query: 745 SVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRN 924
SVN+TRHFQGCAKMTS+IGGFVGGGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLRN
Sbjct: 294 SVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 353
Query: 925 PFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLEN 1104
P+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+SL GV+ +N
Sbjct: 354 PYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKREEEKAKGVNPDN 413
Query: 1105 ASENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQAF-GRGRGRGMMWAPHMPPLARGPRP 1281
ENPDIVPF ALG A GRGRGRG+MW PHM PLARG RP
Sbjct: 414 GGENPDIVPFEDNEEEEEEESEEEEESFGQALGPAAQGRGRGRGIMWPPHM-PLARGARP 472
Query: 1282 FQGMRGFPPNLTGPDGFPY 1338
MRGFPP + G DGF Y
Sbjct: 473 IPSMRGFPPVMMGADGFSY 491
Score = 93.2 bits (230), Expect = 4e-16
Identities = 50/82 (60%), Positives = 56/82 (68%), Gaps = 7/82 (8%)
Frame = +1
Query: 1600 NRPKRDQKAPNGDRKDGEMGGS-------AGGPGDESQYQQRGKAQRQEDRYSAGNGNRN 1758
NR KRDQ+ P DR D GGS GP DE+QY Q K+Q Q+D++ GN RN
Sbjct: 593 NRTKRDQRTPVNDRNDRYSGGSDQGRGQDMAGPDDETQYLQGLKSQ-QDDQFGGGNSFRN 651
Query: 1759 DESESEDEAPRRSRHGEGKKKR 1824
DESESEDEAPRRSRHGEGKKKR
Sbjct: 652 DESESEDEAPRRSRHGEGKKKR 673
>ref|XP_012436534.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30
[Gossypium raimondii] gi|763780831|gb|KJB47902.1|
hypothetical protein B456_008G046800 [Gossypium
raimondii]
Length = 700
Score = 611 bits (1576), Expect = 0.0
Identities = 310/442 (70%), Positives = 334/442 (75%), Gaps = 6/442 (1%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVYKHTNEDI
Sbjct: 66 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDI 125
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQQL++YN+
Sbjct: 126 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLSAYNYNNKFYQQRNAGFPQ 185
Query: 391 XXTEKPQFPQGPNGTNQ--VGKTSMTESGNV----LXXXXXXXXXXXXXXXXXXIPNLLN 552
TEK Q PQ N NQ GK S TES NV L I N+ N
Sbjct: 186 Q-TEKSQIPQAQNNVNQGAAGKPSATESTNVQQQQLQQQQQQIQQPQQQVSQTQIQNVPN 244
Query: 553 SQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNV 732
Q NQA+RTA PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S +NV
Sbjct: 245 GQSNQANRTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENV 304
Query: 733 ILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTR 912
IL+FSVN+TRHFQGCAKMTS+IGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTR
Sbjct: 305 ILVFSVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTR 364
Query: 913 HLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGV 1092
HLRNP+NENLPVKISRDCQELEPSVGEQLASLLYLEPDS+LMA+SL GV
Sbjct: 365 HLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISLAAESKREEEKAKGV 424
Query: 1093 SLENASENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQAFGRGRGRGMMWAPHMPPLARG 1272
+ +NA ENPDIVPF A A GRGRGRG+MW PHM PLARG
Sbjct: 425 NSDNA-ENPDIVPFEDNEEEEEEESEEEDESFGAA---AQGRGRGRGIMWPPHM-PLARG 479
Query: 1273 PRPFQGMRGFPPNLTGPDGFPY 1338
RP GMRGFPP + G DGF Y
Sbjct: 480 ARPMPGMRGFPPMMMGGDGFSY 501
Score = 104 bits (259), Expect = 1e-19
Identities = 53/92 (57%), Positives = 60/92 (65%), Gaps = 8/92 (8%)
Frame = +1
Query: 1609 KRDQKAPNGDRKDG--------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRNDE 1764
KRDQ+ P DR EMGG GG D +QYQQ G+ ED+++AGN RND+
Sbjct: 608 KRDQRTPTNDRSSAGSEQGRGQEMGGPGGGLEDGTQYQQEGQKAHHEDQFAAGNSFRNDD 667
Query: 1765 SESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 1860
SESEDEAPRRSRHGEGKKKRR LE D SD
Sbjct: 668 SESEDEAPRRSRHGEGKKKRRGLEGDVATASD 699
>ref|XP_007041140.1| Cleavage and polyadenylation specificity factor 30 [Theobroma cacao]
gi|508705075|gb|EOX96971.1| Cleavage and polyadenylation
specificity factor 30 [Theobroma cacao]
Length = 698
Score = 610 bits (1574), Expect = 0.0
Identities = 306/438 (69%), Positives = 332/438 (75%), Gaps = 2/438 (0%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVYKHTNEDI
Sbjct: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDI 129
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNG DCRYRHAKLPGPPPPVEE+LQKIQQL+SYN+
Sbjct: 130 KECNMYKLGFCPNGADCRYRHAKLPGPPPPVEEVLQKIQQLSSYNYNKFFQQRNSGFAQQ 189
Query: 391 XXTEKPQFPQGPNGTNQV--GKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQN 564
TEK Q PQG N NQ GK S TES N+ I N+ N Q N
Sbjct: 190 --TEKSQIPQGQNNVNQGAGGKPSTTESANM--HPQQQVQQPQQQVSQTQIQNVPNGQSN 245
Query: 565 QASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIF 744
QA++TA PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S +NVILIF
Sbjct: 246 QANKTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIF 305
Query: 745 SVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRN 924
SVN+TRHFQGCAKMTS+IGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLRN
Sbjct: 306 SVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 365
Query: 925 PFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLEN 1104
P+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+S+ GV+ +N
Sbjct: 366 PYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAELKREEEKAKGVNSDN 425
Query: 1105 ASENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQAFGRGRGRGMMWAPHMPPLARGPRPF 1284
ENPDIVPF A A GRGRGRG+MW PHM PLARG RP
Sbjct: 426 GGENPDIVPFEDNEEEEEEESEEEDESFSAA---AQGRGRGRGVMWPPHM-PLARGARPM 481
Query: 1285 QGMRGFPPNLTGPDGFPY 1338
GMRGFPP + G DGF Y
Sbjct: 482 PGMRGFPPMMMGGDGFSY 499
Score = 101 bits (252), Expect = 9e-19
Identities = 53/92 (57%), Positives = 61/92 (66%), Gaps = 8/92 (8%)
Frame = +1
Query: 1609 KRDQKAPNGDR--------KDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRNDE 1764
KRDQ+ P DR + EM G G DE+QYQQ G+ ED+++AGN RNDE
Sbjct: 606 KRDQRTPTNDRYGAGSEQGRGQEMAGPGGRLDDETQYQQEGQKAHHEDQFAAGNSFRNDE 665
Query: 1765 SESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 1860
SESEDEAPRRSR+GEGKKKRRSLE D SD
Sbjct: 666 SESEDEAPRRSRYGEGKKKRRSLEGDDANGSD 697
>ref|XP_015382577.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30
[Citrus sinensis] gi|641856531|gb|KDO75297.1|
hypothetical protein CISIN_1g005338mg [Citrus sinensis]
Length = 701
Score = 610 bits (1572), Expect = 0.0
Identities = 304/439 (69%), Positives = 332/439 (75%), Gaps = 3/439 (0%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVYKHTNEDI
Sbjct: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDI 129
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNGPDCRYRH KLPGPPP VEE+LQKIQQ++SYNHG
Sbjct: 130 KECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQRGAFS 189
Query: 391 XXTEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQN 564
T+K QF QGPN NQ GK+S ES NV + NL N N
Sbjct: 190 HQTDKSQFSQGPNAVNQGAAGKSSTAESANV-HQQQLVQQPQQQGTQTTQMQNLPNGLPN 248
Query: 565 QASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIF 744
Q +R ATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S +NVILIF
Sbjct: 249 QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIF 308
Query: 745 SVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRN 924
SVN+TRHFQGCAKMTS+IGG VGGGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLRN
Sbjct: 309 SVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 368
Query: 925 PFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLEN 1104
P+NENLPVKISRDCQELEPS+GEQLA+LLYLEPDS+LMA+S+ GV+ +N
Sbjct: 369 PYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDN 428
Query: 1105 ASENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQAF-GRGRGRGMMWAPHMPPLARGPRP 1281
+NPDIVPF +LG A GRGRGRGMMW P PLARG RP
Sbjct: 429 GGDNPDIVPF----EDNEEEEEEESEEEEESLGTASQGRGRGRGMMW-PGPMPLARGARP 483
Query: 1282 FQGMRGFPPNLTGPDGFPY 1338
GMRGFPP + G DGF Y
Sbjct: 484 VPGMRGFPPMMIGADGFSY 502
Score = 96.3 bits (238), Expect = 4e-17
Identities = 54/96 (56%), Positives = 59/96 (61%), Gaps = 11/96 (11%)
Frame = +1
Query: 1609 KRDQKAPNGDRKDG-----------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNR 1755
KRD + DR D EMGG GP DE QYQQ G QED+Y + N R
Sbjct: 607 KRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQEDQYGSRNF-R 665
Query: 1756 NDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSDD 1863
NDESESEDEAPRRSRHGEGKKKRR E D+ A SD+
Sbjct: 666 NDESESEDEAPRRSRHGEGKKKRRDSEGDAAASSDN 701
>ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
gi|557551535|gb|ESR62164.1| hypothetical protein
CICLE_v10014454mg [Citrus clementina]
Length = 701
Score = 607 bits (1566), Expect = 0.0
Identities = 303/439 (69%), Positives = 331/439 (75%), Gaps = 3/439 (0%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVYKHTNEDI
Sbjct: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDI 129
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNGPDCRYRH KLPGPPP VEE+LQKIQQ++SYNHG
Sbjct: 130 KECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKLFQQRGAFS 189
Query: 391 XXTEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQN 564
+K QF QGPN NQ GK+S ES NV + NL N N
Sbjct: 190 HQIDKSQFSQGPNAVNQGAAGKSSTAESANV-HQQQLVQQPQQQGTQTTQMQNLPNGLPN 248
Query: 565 QASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIF 744
Q +R ATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S +NVILIF
Sbjct: 249 QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIF 308
Query: 745 SVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRN 924
SVN+TRHFQGCAKMTS+IGG VGGGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLRN
Sbjct: 309 SVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 368
Query: 925 PFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLEN 1104
P+NENLPVKISRDCQELEPS+GEQLA+LLYLEPDS+LMA+S+ GV+ +N
Sbjct: 369 PYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDN 428
Query: 1105 ASENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQAF-GRGRGRGMMWAPHMPPLARGPRP 1281
+NPDIVPF +LG A GRGRGRGMMW P PLARG RP
Sbjct: 429 GGDNPDIVPF----EDNEEEEEEESEEEEESLGTASQGRGRGRGMMW-PGPMPLARGARP 483
Query: 1282 FQGMRGFPPNLTGPDGFPY 1338
GMRGFPP + G DGF Y
Sbjct: 484 VPGMRGFPPMMIGADGFSY 502
Score = 96.3 bits (238), Expect = 4e-17
Identities = 54/96 (56%), Positives = 59/96 (61%), Gaps = 11/96 (11%)
Frame = +1
Query: 1609 KRDQKAPNGDRKDG-----------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNR 1755
KRD + DR D EMGG GP DE QYQQ G QED+Y + N R
Sbjct: 607 KRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQEDQYGSRNF-R 665
Query: 1756 NDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSDD 1863
NDESESEDEAPRRSRHGEGKKKRR E D+ A SD+
Sbjct: 666 NDESESEDEAPRRSRHGEGKKKRRDSEGDAAASSDN 701
>gb|KJB47903.1| hypothetical protein B456_008G046800 [Gossypium raimondii]
Length = 701
Score = 607 bits (1564), Expect = 0.0
Identities = 310/443 (69%), Positives = 334/443 (75%), Gaps = 7/443 (1%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVYKHTNEDI
Sbjct: 66 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDI 125
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQQL++YN+
Sbjct: 126 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLSAYNYN-NKFYQQRNAGFP 184
Query: 391 XXTEKPQFPQGPNGTNQ--VGKTSMTESGNV----LXXXXXXXXXXXXXXXXXXIPNLLN 552
TEK Q PQ N NQ GK S TES NV L I N+ N
Sbjct: 185 QQTEKSQIPQAQNNVNQGAAGKPSATESTNVQQQQLQQQQQQIQQPQQQVSQTQIQNVPN 244
Query: 553 SQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNV 732
Q NQA+RTA PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S +NV
Sbjct: 245 GQSNQANRTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENV 304
Query: 733 ILIFSVNKTRHFQ-GCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKT 909
IL+FSVN+TRHFQ GCAKMTS+IGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KT
Sbjct: 305 ILVFSVNRTRHFQVGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKT 364
Query: 910 RHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXG 1089
RHLRNP+NENLPVKISRDCQELEPSVGEQLASLLYLEPDS+LMA+SL G
Sbjct: 365 RHLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISLAAESKREEEKAKG 424
Query: 1090 VSLENASENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQAFGRGRGRGMMWAPHMPPLAR 1269
V+ +NA ENPDIVPF A A GRGRGRG+MW PHM PLAR
Sbjct: 425 VNSDNA-ENPDIVPFEDNEEEEEEESEEEDESFGAA---AQGRGRGRGIMWPPHM-PLAR 479
Query: 1270 GPRPFQGMRGFPPNLTGPDGFPY 1338
G RP GMRGFPP + G DGF Y
Sbjct: 480 GARPMPGMRGFPPMMMGGDGFSY 502
Score = 104 bits (259), Expect = 1e-19
Identities = 53/92 (57%), Positives = 60/92 (65%), Gaps = 8/92 (8%)
Frame = +1
Query: 1609 KRDQKAPNGDRKDG--------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRNDE 1764
KRDQ+ P DR EMGG GG D +QYQQ G+ ED+++AGN RND+
Sbjct: 609 KRDQRTPTNDRSSAGSEQGRGQEMGGPGGGLEDGTQYQQEGQKAHHEDQFAAGNSFRNDD 668
Query: 1765 SESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 1860
SESEDEAPRRSRHGEGKKKRR LE D SD
Sbjct: 669 SESEDEAPRRSRHGEGKKKRRGLEGDVATASD 700
>ref|XP_003546247.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Glycine max] gi|947062499|gb|KRH11760.1|
hypothetical protein GLYMA_15G128500 [Glycine max]
Length = 691
Score = 603 bits (1555), Expect = 0.0
Identities = 303/440 (68%), Positives = 329/440 (74%), Gaps = 4/440 (0%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 67 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDI 126
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNGPDCRYRHAK PGPPPPVEE+LQKIQ L SYN+
Sbjct: 127 KECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLFSYNYNSSNKFFQQRGASY 186
Query: 391 XX-TEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQ 561
EKPQ PQG N TNQ GK ESGN + N+ N Q
Sbjct: 187 NQQAEKPQLPQGTNSTNQGVTGKPLPAESGNA--QPQQQVQQSQQQVNQSQMQNVANGQP 244
Query: 562 NQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILI 741
NQA+RTATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEAF+SV+NVIL+
Sbjct: 245 NQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILV 304
Query: 742 FSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLR 921
FSVN+TRHFQGCAKMTSRIGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLR
Sbjct: 305 FSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 364
Query: 922 NPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLE 1101
NP+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+S+ GV+ +
Sbjct: 365 NPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGVNPD 424
Query: 1102 NASENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQA-FGRGRGRGMMWAPHMPPLARGPR 1278
N ENPDIVPF +G A GRGRGRGMMW PHM PL RG R
Sbjct: 425 NGGENPDIVPFEDNEEEEEEESDEEEESFSHGVGPAGQGRGRGRGMMWPPHM-PLGRGAR 483
Query: 1279 PFQGMRGFPPNLTGPDGFPY 1338
P GM+GF P + G DG Y
Sbjct: 484 PMPGMQGFNPVMMG-DGLSY 502
Score = 73.9 bits (180), Expect = 4e-10
Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 9/82 (10%)
Frame = +1
Query: 1609 KRDQK-APNGDR--------KDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRND 1761
KRDQ+ A DR K +M +GGP D++QYQQ K +D + A N RND
Sbjct: 611 KRDQRTADRNDRFGSGSEQGKSQDMLSQSGGPDDDAQYQQGYKGN--QDDHPAVNNFRND 668
Query: 1762 ESESEDEAPRRSRHGEGKKKRR 1827
+SESEDEAPRRSRHGEGKKK +
Sbjct: 669 DSESEDEAPRRSRHGEGKKKHK 690
>gb|KYP39096.1| Cleavage and polyadenylation specificity factor CPSF30 [Cajanus
cajan]
Length = 648
Score = 599 bits (1544), Expect = 0.0
Identities = 303/440 (68%), Positives = 327/440 (74%), Gaps = 4/440 (0%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 43 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDI 102
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNGPDCRYRHAK PGPPPPVEE+LQKIQ L SYN+
Sbjct: 103 KECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQQRGSNY 162
Query: 391 XX-TEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQ 561
EK Q PQG N TNQ GK ESGN + N N Q
Sbjct: 163 NQQAEKSQLPQGNNSTNQGVTGKPLPAESGNA--QPQQQVQQSQQPVSQSQMQNPANGQP 220
Query: 562 NQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILI 741
NQA+RTATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEAF+SV+NVILI
Sbjct: 221 NQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILI 280
Query: 742 FSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLR 921
FSVN+TRHFQGCAKMTSRIGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLR
Sbjct: 281 FSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 340
Query: 922 NPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLE 1101
NP+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+S+ GV+ +
Sbjct: 341 NPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISIAAESKREEEKAKGVNPD 400
Query: 1102 NASENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQA-FGRGRGRGMMWAPHMPPLARGPR 1278
N ENPDIVPF +G A GRGRGRGMMW PHM PL RG R
Sbjct: 401 NGGENPDIVPFEDNEEEEEEESDEEEESFGHGVGPAGQGRGRGRGMMWPPHM-PLGRGAR 459
Query: 1279 PFQGMRGFPPNLTGPDGFPY 1338
P GM+GF P + G DG Y
Sbjct: 460 PMPGMQGFNPVMMG-DGLSY 478
Score = 63.2 bits (152), Expect = 9e-07
Identities = 30/52 (57%), Positives = 35/52 (67%)
Frame = +1
Query: 1681 DESQYQQRGKAQRQEDRYSAGNGNRNDESESEDEAPRRSRHGEGKKKRRSLE 1836
D + G Q +D + A N +ND+SESEDEAPRRSRHGEGKKKRR E
Sbjct: 591 DRNDRYGSGSEQGNQDDHPAANNFKNDDSESEDEAPRRSRHGEGKKKRRGTE 642
>dbj|BAT87667.1| hypothetical protein VIGAN_05105800 [Vigna angularis var. angularis]
Length = 696
Score = 600 bits (1548), Expect = 0.0
Identities = 304/440 (69%), Positives = 328/440 (74%), Gaps = 4/440 (0%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 65 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDI 124
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNGPDCRYRHAK PGPPPPVEE+LQKIQ L SYN+
Sbjct: 125 KECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQQRGSSY 184
Query: 391 XX-TEKPQFPQGPNGTNQV--GKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQ 561
EK Q PQG N TNQV GK ESGN + N+ N Q
Sbjct: 185 AQQAEKSQLPQGTNSTNQVVTGKPLPAESGNA--QPQQQVQQSQQQVSQSQMQNVANGQP 242
Query: 562 NQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILI 741
NQASR+ATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEAF+SV+NVILI
Sbjct: 243 NQASRSATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILI 302
Query: 742 FSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLR 921
FSVN+TRHFQGCAKMTSRIGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLR
Sbjct: 303 FSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 362
Query: 922 NPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLE 1101
NP+NENLPVKISRDCQELEPS+GEQLASLLYLEPD +LMAVS+ GV+ +
Sbjct: 363 NPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAESKREEEKAKGVNPD 422
Query: 1102 NASENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQA-FGRGRGRGMMWAPHMPPLARGPR 1278
N ENPDIVPF +G A GRGRGRGMMW PHM PL RG R
Sbjct: 423 NGGENPDIVPFEDNEEEEEEESDEEEESFGHGVGPAGQGRGRGRGMMWPPHM-PLGRGAR 481
Query: 1279 PFQGMRGFPPNLTGPDGFPY 1338
P GM+GF P + G DG Y
Sbjct: 482 PMPGMQGFNPVMMG-DGLSY 500
Score = 77.4 bits (189), Expect = 4e-11
Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
Frame = +1
Query: 1609 KRDQKAPN-GDR--------KDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRND 1761
KRDQ+A + DR K +M +G P D++QYQQ KA +D + A N RND
Sbjct: 606 KRDQRATDRNDRYGSGSEQGKSQDMLSQSGAPDDDTQYQQGYKAN--QDDHPAVNNFRND 663
Query: 1762 ESESEDEAPRRSRHGEGKKKRRSLE 1836
+SESEDEAPRRSRHGEGKKKRR E
Sbjct: 664 DSESEDEAPRRSRHGEGKKKRRGPE 688
>ref|XP_012569987.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30
[Cicer arietinum]
Length = 677
Score = 600 bits (1546), Expect = 0.0
Identities = 305/442 (69%), Positives = 330/442 (74%), Gaps = 6/442 (1%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKG+ACGFLHQYDK+RMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 62 RRSFRQTVCRHWLRSLCMKGEACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDI 121
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYN-HGXXXXXXXXXXXX 387
KECNMYKLGFCPNGPDCRYRHAK PGPPPP+EE+LQKIQ L SYN +
Sbjct: 122 KECNMYKLGFCPNGPDCRYRHAKSPGPPPPIEEVLQKIQHLYSYNFNNSHKFIQQRGSSY 181
Query: 388 XXXTEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQ 561
EK QFPQG N NQ GK ESGNV NL N Q
Sbjct: 182 TQQVEKSQFPQGINSANQGVAGKPLAAESGNV--QQQQQVQQSQQQVSQIQTQNLANGQP 239
Query: 562 NQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILI 741
NQA+RTATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEAF+SV+NVILI
Sbjct: 240 NQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILI 299
Query: 742 FSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLR 921
FSVN+TRHFQGCAKMTSRIGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLR
Sbjct: 300 FSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 359
Query: 922 NPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLE 1101
NP+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+S+ GV+ +
Sbjct: 360 NPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISIAAESKREEEKAKGVNPD 419
Query: 1102 NASENPDIVPFXXXXXXXXXXXXXXXXXXXXA---LGQAFGRGRGRGMMWAPHMPPLARG 1272
NA ENPDIVPF A +GQ GRGRGRGMMW PHM PL RG
Sbjct: 420 NAGENPDIVPFEDNEEEEEEESDEEEESFVQAVVPVGQ--GRGRGRGMMWPPHM-PLGRG 476
Query: 1273 PRPFQGMRGFPPNLTGPDGFPY 1338
RP GM+GF P + G DG Y
Sbjct: 477 ARPMPGMQGFNPVMMG-DGLSY 497
Score = 66.2 bits (160), Expect = 1e-07
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Frame = +1
Query: 1609 KRDQKAPN-GDR--------KDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRND 1761
KRDQ+ + DR K +M +GGP DE QYQQ G + N RN+
Sbjct: 603 KRDQRTNDRNDRYSSGQEQGKSQDMLSQSGGPDDEMQYQQSG---------APANNFRNE 653
Query: 1762 ESESEDEAPRRSRHGEGKKKR 1824
+SESEDEAPRRSRHGEGKK++
Sbjct: 654 DSESEDEAPRRSRHGEGKKRK 674
>ref|XP_007147504.1| hypothetical protein PHAVU_006G130200g [Phaseolus vulgaris]
gi|561020727|gb|ESW19498.1| hypothetical protein
PHAVU_006G130200g [Phaseolus vulgaris]
Length = 697
Score = 599 bits (1545), Expect = 0.0
Identities = 304/440 (69%), Positives = 326/440 (74%), Gaps = 4/440 (0%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 65 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDI 124
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNGPDCRYRHAK PGPPPPVEE+LQKIQ L SYN+
Sbjct: 125 KECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQQRGSSY 184
Query: 391 XX-TEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQ 561
EK Q PQG N TNQ GK ESGN I N+ N Q
Sbjct: 185 TQQAEKSQLPQGTNSTNQGVTGKPLPAESGNA-QPQQQVQQSQQQQVSQNQIQNVANGQP 243
Query: 562 NQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILI 741
NQASR ATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEAF+SV+NVILI
Sbjct: 244 NQASRAATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILI 303
Query: 742 FSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLR 921
FSVN+TRHFQGCAKMTSRIGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLR
Sbjct: 304 FSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 363
Query: 922 NPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLE 1101
NP+NENLPVKISRDCQELEPS+GEQLASLLYLEPD +LMAVS+ GV+ +
Sbjct: 364 NPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAESKREEEKAKGVNPD 423
Query: 1102 NASENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQA-FGRGRGRGMMWAPHMPPLARGPR 1278
N ENPDIVPF +G A GRGRGRGMMW PHM PL RG R
Sbjct: 424 NGGENPDIVPFEDNEEEEEEESDEEDESFGHGVGPAGQGRGRGRGMMWPPHM-PLPRGAR 482
Query: 1279 PFQGMRGFPPNLTGPDGFPY 1338
P GM+GF P + G DG Y
Sbjct: 483 PMPGMQGFNPVMMG-DGLSY 501
Score = 75.1 bits (183), Expect = 2e-10
Identities = 45/85 (52%), Positives = 53/85 (62%), Gaps = 9/85 (10%)
Frame = +1
Query: 1609 KRDQKAPN-GDR--------KDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRND 1761
KRDQ+ + DR K +M +G P D+ QYQQ KA +D + A N RND
Sbjct: 607 KRDQRTTDRNDRYGSGSEQGKSQDMLSQSGAPDDDMQYQQGYKAN--QDDHPAVNNFRND 664
Query: 1762 ESESEDEAPRRSRHGEGKKKRRSLE 1836
+SESEDEAPRRSRHGEGKKKRR E
Sbjct: 665 DSESEDEAPRRSRHGEGKKKRRGPE 689
>ref|XP_014518648.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30
[Vigna radiata var. radiata]
Length = 696
Score = 598 bits (1543), Expect = 0.0
Identities = 303/440 (68%), Positives = 327/440 (74%), Gaps = 4/440 (0%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 65 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDI 124
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNGPDCRYRHAK PGPPPPVEE+LQKIQ L SYN+
Sbjct: 125 KECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQQRGSSY 184
Query: 391 XX-TEKPQFPQGPNGTNQV--GKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQ 561
EK Q PQG N TNQV GK ESGN + N+ N Q
Sbjct: 185 AQQAEKSQLPQGTNSTNQVVTGKPLPAESGNA--QPQQQVQQSQQQVSQSQMQNVANGQP 242
Query: 562 NQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILI 741
NQASR+ATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEAF+S +NVILI
Sbjct: 243 NQASRSATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSXENVILI 302
Query: 742 FSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLR 921
FSVN+TRHFQGCAKMTSRIGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLR
Sbjct: 303 FSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 362
Query: 922 NPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLE 1101
NP+NENLPVKISRDCQELEPS+GEQLASLLYLEPD +LMAVS+ GV+ +
Sbjct: 363 NPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAESKREEEKAKGVNPD 422
Query: 1102 NASENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQA-FGRGRGRGMMWAPHMPPLARGPR 1278
N ENPDIVPF +G A GRGRGRGMMW PHM PL RG R
Sbjct: 423 NGGENPDIVPFEDNEEEEEEESDEEEESFGHGVGPAGQGRGRGRGMMWPPHM-PLGRGAR 481
Query: 1279 PFQGMRGFPPNLTGPDGFPY 1338
P GM+GF P + G DG Y
Sbjct: 482 PMPGMQGFNPVMMG-DGLSY 500
Score = 78.2 bits (191), Expect = 2e-11
Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
Frame = +1
Query: 1609 KRDQKAPN-GDR--------KDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRND 1761
KRDQ+A + DR K +M +G P D++QYQQ KA +D + A N RND
Sbjct: 606 KRDQRATDRNDRYGSGSEQGKSQDMLSQSGAPDDDTQYQQGYKAN--QDEHPAVNNFRND 663
Query: 1762 ESESEDEAPRRSRHGEGKKKRRSLE 1836
+SESEDEAPRRSRHGEGKKKRR E
Sbjct: 664 DSESEDEAPRRSRHGEGKKKRRGPE 688
>ref|XP_010687042.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30
[Beta vulgaris subsp. vulgaris]
gi|870851989|gb|KMT03954.1| hypothetical protein
BVRB_8g187630 [Beta vulgaris subsp. vulgaris]
Length = 680
Score = 598 bits (1541), Expect = 0.0
Identities = 301/453 (66%), Positives = 332/453 (73%), Gaps = 8/453 (1%)
Frame = +1
Query: 4 ADXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 183
AD RRSFRQTVCRHWLRSLCMKGD+CGFLHQYDKSRMPVCRFFRLYGECREQDC
Sbjct: 49 ADPASGQGNRRSFRQTVCRHWLRSLCMKGDSCGFLHQYDKSRMPVCRFFRLYGECREQDC 108
Query: 184 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXX 363
VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAK PGPPPPV+E+LQKIQQLTSY++G
Sbjct: 109 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKQPGPPPPVDEVLQKIQQLTSYSYGASNR 168
Query: 364 XXXXXXXXXXX-TEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXX 534
++ QFPQG N TNQ V K + TES N+
Sbjct: 169 FFQQRNTNYSQQADRSQFPQGANSTNQGAVPKPTATESSNM-----QQQLQQLPLAGQDQ 223
Query: 535 IPNLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAF 714
+ NL ++ NQ R ATPLPQG +RYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF
Sbjct: 224 LQNLPSNPSNQTGRIATPLPQGLTRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 283
Query: 715 ESVDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGEL 894
+SV++VIL+FSVN+TRHFQGCAKMTS+IG GGGNWKHA+GTAHYGRNF+VKWLKL EL
Sbjct: 284 DSVEHVILVFSVNRTRHFQGCAKMTSKIGETAGGGNWKHAHGTAHYGRNFSVKWLKLCEL 343
Query: 895 SFNKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXX 1074
+FNKTRHLRNP+NENLPVKISRDCQELEPSVGEQLASLLYLEPDS+LMA
Sbjct: 344 TFNKTRHLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMATLSAAESKREE 403
Query: 1075 XXXXGVSLENASENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQA-----FGRGRGRGMM 1239
GV +EN +ENPDIVPF + GQA GRGRGRGMM
Sbjct: 404 EKAKGVDIENGAENPDIVPF---DDNEEEEEEEESEEEDESFGQAPGLAIQGRGRGRGMM 460
Query: 1240 WAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 1338
W P+ P+ RG RP QGMR FPP + G DGF Y
Sbjct: 461 WPPNF-PMGRGVRPMQGMRAFPPGMMGVDGFTY 492
Score = 75.9 bits (185), Expect = 1e-10
Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Frame = +1
Query: 1606 PKRDQKAPNGD--------RKDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRND 1761
PKRD + P D + G++ GG G + QYQQ ++ + N ND
Sbjct: 594 PKRDLRGPGNDWGETFGSGPEQGKLQDMGGGRGGDPQYQQG------TEKIVSCNNVTND 647
Query: 1762 ESESEDEAPRRSRHGEGKKKRRSLEADSNA 1851
ESESEDEAPRRSRHGEGKKKRRSL+ D +A
Sbjct: 648 ESESEDEAPRRSRHGEGKKKRRSLDGDVHA 677
>ref|XP_010092677.1| Cleavage and polyadenylation specificity factor CPSF30 [Morus
notabilis] gi|587862159|gb|EXB51974.1| Cleavage and
polyadenylation specificity factor CPSF30 [Morus
notabilis]
Length = 710
Score = 597 bits (1540), Expect = 0.0
Identities = 297/438 (67%), Positives = 322/438 (73%), Gaps = 3/438 (0%)
Frame = +1
Query: 34 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK 213
RSFRQTVCRHWLRSLCMKG+ACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK
Sbjct: 74 RSFRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK 133
Query: 214 ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYN-HGXXXXXXXXXXXXX 390
ECNMYKLGFCPNGPDCRYRHAKLPGPPP VEE+LQKIQ L+SYN H
Sbjct: 134 ECNMYKLGFCPNGPDCRYRHAKLPGPPPSVEEVLQKIQHLSSYNYHSNKFFQQRNAGGFA 193
Query: 391 XXTEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQN 564
EKP P GPN +Q VGK S+ ES NV I N+ N
Sbjct: 194 QLGEKPLLPLGPNAVSQGVVGKPSILESANV-QQPQQQVQPSQQPVGQNQIQNVFTGLPN 252
Query: 565 QASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIF 744
QA+RT PLP G SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+ +NVILIF
Sbjct: 253 QANRTVAPLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDCAENVILIF 312
Query: 745 SVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRN 924
SVN+TRHFQGCAKM SRIGG + GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLRN
Sbjct: 313 SVNRTRHFQGCAKMISRIGGSISGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 372
Query: 925 PFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLEN 1104
P+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+SL GV +N
Sbjct: 373 PYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKREEEKAKGVDPDN 432
Query: 1105 ASENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQAFGRGRGRGMMWAPHMPPLARGPRPF 1284
ENPDIVPF LG GRGRGRG+MW PHM PL+RG RP
Sbjct: 433 GGENPDIVPFEDNEEDEEEESEDEEESFSQVLGANQGRGRGRGVMWPPHM-PLSRGARPM 491
Query: 1285 QGMRGFPPNLTGPDGFPY 1338
M+GFPP + G DG PY
Sbjct: 492 PSMQGFPPVMIGADGSPY 509
Score = 100 bits (250), Expect = 2e-18
Identities = 55/96 (57%), Positives = 63/96 (65%), Gaps = 11/96 (11%)
Frame = +1
Query: 1606 PKRDQKAPNGDRKDG-----------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGN 1752
P+RDQ+ DR + EM G AGGP D++ YQ KA RQED+Y AGN
Sbjct: 615 PRRDQRGLANDRNERYGAGSDQVRGQEMSGPAGGPEDDAHYQLGAKA-RQEDQYGAGNSF 673
Query: 1753 RNDESESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 1860
RNDESESEDEAPRRSRHG+GKKKRRS E D+ SD
Sbjct: 674 RNDESESEDEAPRRSRHGDGKKKRRSSEEDAATGSD 709
>ref|XP_015882698.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30
[Ziziphus jujuba]
Length = 702
Score = 597 bits (1539), Expect = 0.0
Identities = 300/440 (68%), Positives = 327/440 (74%), Gaps = 4/440 (0%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFR++GECREQDCVYKHT+EDI
Sbjct: 66 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRMFGECREQDCVYKHTHEDI 125
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQ L SYN+
Sbjct: 126 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQNLNSYNYNTSNKFFQQRNAGF 185
Query: 391 XX-TEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNLLNSQQ 561
EK Q QG NQ VGK S ES N I N+ N
Sbjct: 186 SQQAEKTQLAQGSTAVNQGVVGKPSAMESTNA--QQQQQVQQSQQQIGQNPIVNVPNGLP 243
Query: 562 NQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILI 741
NQA+RTA+PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S +NVILI
Sbjct: 244 NQANRTASPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSTENVILI 303
Query: 742 FSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLR 921
FSVN+TRHFQGCAKM SRIGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLR
Sbjct: 304 FSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 363
Query: 922 NPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLE 1101
NPFNENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+S+ GV+ +
Sbjct: 364 NPFNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISIAAESKREEEKAKGVNPD 423
Query: 1102 NASENPDIVPFXXXXXXXXXXXXXXXXXXXXALGQA-FGRGRGRGMMWAPHMPPLARGPR 1278
N+ ENPDIVPF G A GRGRGRG+MW PHM PLARG R
Sbjct: 424 NSGENPDIVPFEDNEEEEEEESEDEEESLSQVPGAANQGRGRGRGVMWPPHM-PLARGAR 482
Query: 1279 PFQGMRGFPPNLTGPDGFPY 1338
P GM+GFPP + G DG PY
Sbjct: 483 PMPGMQGFPPVMMGADGSPY 502
Score = 99.4 bits (246), Expect = 5e-18
Identities = 55/93 (59%), Positives = 59/93 (63%), Gaps = 9/93 (9%)
Frame = +1
Query: 1609 KRDQKAPNGDRKDGEMGGS---------AGGPGDESQYQQRGKAQRQEDRYSAGNGNRND 1761
KRDQ+ P DR + GS AGGP DE+ YQQ G QED+Y AGN RND
Sbjct: 610 KRDQRGPANDRNERFSVGSDQLKGQEGQAGGPDDEAHYQQ-GLKPHQEDQYGAGNSFRND 668
Query: 1762 ESESEDEAPRRSRHGEGKKKRRSLEADSNAPSD 1860
ESESEDEAPRRSRHGEGKKKRR E D SD
Sbjct: 669 ESESEDEAPRRSRHGEGKKKRRGSEGDGATGSD 701
>ref|XP_002523201.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30
[Ricinus communis] gi|223537608|gb|EEF39232.1| conserved
hypothetical protein [Ricinus communis]
Length = 702
Score = 597 bits (1539), Expect = 0.0
Identities = 305/445 (68%), Positives = 326/445 (73%), Gaps = 9/445 (2%)
Frame = +1
Query: 31 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 210
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 129
Query: 211 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 390
KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQQL SYN+G
Sbjct: 130 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLNSYNYGSSNKFFQQRGAGF 189
Query: 391 XX-TEKPQFPQGPN--GTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIP-----NL 546
+K QF QGPN G K TES NV NL
Sbjct: 190 QQHADKSQFSQGPNNMGQGMAAKPPGTESANVQQPQQQQPQPGQGQQSQQQATQTPTQNL 249
Query: 547 LNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVD 726
N Q NQA+RTA PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S +
Sbjct: 250 PNGQPNQANRTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAE 309
Query: 727 NVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNK 906
NVILIFSVN+TRHFQGCAKMTS+IG VGGGNWK+A+GTAHYGRNF+VKWLKL ELSF+K
Sbjct: 310 NVILIFSVNRTRHFQGCAKMTSKIGASVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHK 369
Query: 907 TRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXX 1086
TRHLRNP+NENLPVKISRDCQELEPSVG QLA LLY EPDS+LMA+SL
Sbjct: 370 TRHLRNPYNENLPVKISRDCQELEPSVGGQLACLLYDEPDSELMAISLAAEAKREEEKAK 429
Query: 1087 GVSLENASENPDIVPFXXXXXXXXXXXXXXXXXXXXALG-QAFGRGRGRGMMWAPHMPPL 1263
GV+ EN +NPDIVPF ALG GRGRGRG++W PHM PL
Sbjct: 430 GVNPENGGDNPDIVPFEDNEEEEEEESEEEEESFGQALGAPGQGRGRGRGIIW-PHM-PL 487
Query: 1264 ARGPRPFQGMRGFPPNLTGPDGFPY 1338
ARG RP GMRGFPP + G D F Y
Sbjct: 488 ARGARPIPGMRGFPPMMMGADSFSY 512
Score = 94.4 bits (233), Expect = 2e-16
Identities = 50/87 (57%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Frame = +1
Query: 1609 KRDQKAPNGDRKD--GEMG-GSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRNDESESED 1779
KRDQ+ DR + G +AG P DE++YQQ G ED++ AGN RNDESESED
Sbjct: 615 KRDQRMTANDRYSTGSDQGRNTAGEPDDEARYQQEGLKASHEDQFGAGNSFRNDESESED 674
Query: 1780 EAPRRSRHGEGKKKRRSLEADSNAPSD 1860
EAPRRSRHGEGKKKRR E D+ SD
Sbjct: 675 EAPRRSRHGEGKKKRRGSEGDATPGSD 701