BLASTX nr result
ID: Rehmannia27_contig00021732
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00021732
(972 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011087804.1| PREDICTED: pentatricopeptide repeat-containi... 469 e-161
ref|XP_012828447.1| PREDICTED: pentatricopeptide repeat-containi... 444 e-151
ref|XP_009783824.1| PREDICTED: pentatricopeptide repeat-containi... 377 e-125
ref|XP_009615517.1| PREDICTED: pentatricopeptide repeat-containi... 376 e-124
ref|XP_015062709.1| PREDICTED: pentatricopeptide repeat-containi... 372 e-123
ref|XP_015062693.1| PREDICTED: pentatricopeptide repeat-containi... 372 e-123
ref|XP_015062668.1| PREDICTED: pentatricopeptide repeat-containi... 372 e-123
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi... 371 e-122
ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi... 366 e-120
gb|KVI07821.1| Pentatricopeptide repeat-containing protein [Cyna... 330 e-106
emb|CDO97508.1| unnamed protein product [Coffea canephora] 318 e-105
gb|KVI07824.1| Pentatricopeptide repeat-containing protein [Cyna... 318 e-101
gb|KVI07848.1| Pentatricopeptide repeat-containing protein [Cyna... 317 4e-99
ref|XP_010276672.1| PREDICTED: pentatricopeptide repeat-containi... 305 1e-96
ref|XP_010656116.1| PREDICTED: pentatricopeptide repeat-containi... 297 1e-93
ref|XP_012089183.1| PREDICTED: pentatricopeptide repeat-containi... 295 5e-93
ref|XP_015889017.1| PREDICTED: pentatricopeptide repeat-containi... 294 4e-92
ref|XP_009359734.1| PREDICTED: pentatricopeptide repeat-containi... 290 7e-91
ref|XP_008388776.1| PREDICTED: pentatricopeptide repeat-containi... 291 8e-91
ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein... 290 2e-90
>ref|XP_011087804.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum] gi|747081065|ref|XP_011087805.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Sesamum indicum]
gi|747081067|ref|XP_011087806.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum] gi|747081069|ref|XP_011087807.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Sesamum indicum]
gi|747081071|ref|XP_011087808.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum] gi|747081073|ref|XP_011087809.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Sesamum indicum]
gi|747081075|ref|XP_011087810.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum]
Length = 552
Score = 469 bits (1207), Expect = e-161
Identities = 228/323 (70%), Positives = 273/323 (84%)
Frame = -3
Query: 970 ESSKASPASTLWFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNNPN 791
ESS +SPAS +WFIKVVCTLC+ HS S F++DYFRE L+PFVA+ V+ HI +RLNNP+
Sbjct: 28 ESSHSSPASIVWFIKVVCTLCVHHSHSLNFFDTDYFRESLNPFVAFGVVYHINNRLNNPD 87
Query: 790 LAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFL 611
LAFSFFRY+RLS NL+H ES F+LLLRSLCRM LHDSAKLV+ YM+ADG PN+A+LD +
Sbjct: 88 LAFSFFRYSRLSFNLLHLESTFNLLLRSLCRMGLHDSAKLVFEYMKADGFWPNSAVLDLV 147
Query: 610 IASFANARKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHM 431
++SF NA KFR+AE ILIA+AE+CN++GET S V NKFL +LI+RNR DEAV+ FRGH+
Sbjct: 148 VSSFGNAGKFRVAEEILIAQAEICNEKGETVSSFVYNKFLCILINRNRVDEAVLFFRGHI 207
Query: 430 LKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGN 251
L+ SF PD SFN V++GLC GKV+ AFE +VMRSFSC PD+VTYNTLING CRVG+
Sbjct: 208 LRLGSFCPDTQSFNIVIKGLCRVGKVDTAFEFLDVMRSFSCHPDLVTYNTLINGFCRVGH 267
Query: 250 VDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYN 71
+DRA ELLRE++ S FSP+VVTYTSVISGYC+SGKME+AA LFDEMIN G RPNLFT+N
Sbjct: 268 MDRAEELLREVKPQSGFSPDVVTYTSVISGYCRSGKMEEAAALFDEMINYGTRPNLFTFN 327
Query: 70 VIIDGFGKIGEVASALKMYEKMV 2
VIIDGFGK G+VASALKMYE+MV
Sbjct: 328 VIIDGFGKKGKVASALKMYERMV 350
Score = 85.5 bits (210), Expect = 6e-15
Identities = 74/303 (24%), Positives = 129/303 (42%), Gaps = 36/303 (11%)
Frame = -3
Query: 802 NNPNLAFSFFRYTRLSLNLIHSES-AFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNA 626
N + A FFR L L ++ +F+++++ LCR+ D+A M + P+
Sbjct: 194 NRVDEAVLFFRGHILRLGSFCPDTQSFNIVIKGLCRVGKVDTAFEFLDVMRSFSCHPDLV 253
Query: 625 LLDFLIASFANARKFRIAERILIAKAELCNQRGETFSPSVCN--KFLSLLISRNRFDEAV 452
+ LI F AE +L E+ Q G FSP V +S + +EA
Sbjct: 254 TYNTLINGFCRVGHMDRAEELL---REVKPQSG--FSPDVVTYTSVISGYCRSGKMEEAA 308
Query: 451 VLF------------------------RGHMLKSRS---------FAPDNCSFNTVMRGL 371
LF +G + + F PD +F +++
Sbjct: 309 ALFDEMINYGTRPNLFTFNVIIDGFGKKGKVASALKMYERMVNCGFHPDVVTFTSLIDCY 368
Query: 370 CMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPN 191
C G++E+ +L++ M P+ T++ LI LC+ ++ A +LLR++ + P
Sbjct: 369 CRRGELEQGMKLWDEMNERKVSPNAFTFSILITSLCKENRLNEARDLLRQLNWREDIVPP 428
Query: 190 VVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYE 11
Y VI G+CK+G +++A + EM G + T+ ++I G G + A+ MY
Sbjct: 429 PFIYNPVIDGFCKAGNIDEANAIVKEMEMKGCVHDKMTFTILILGHCMKGRMFEAIGMYN 488
Query: 10 KMV 2
KM+
Sbjct: 489 KML 491
Score = 77.4 bits (189), Expect = 3e-12
Identities = 60/244 (24%), Positives = 115/244 (47%), Gaps = 7/244 (2%)
Frame = -3
Query: 718 LLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKAELC 539
++ CR + A ++ M G PN + +I F K A + + + C
Sbjct: 294 VISGYCRSGKMEEAAALFDEMINYGTRPNLFTFNVIIDGFGKKGKVASALK-MYERMVNC 352
Query: 538 NQRGETFSPSVCNKFLSLL---ISRNRFDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLC 368
F P V F SL+ R ++ + L+ + R +P+ +F+ ++ LC
Sbjct: 353 G-----FHPDVVT-FTSLIDCYCRRGELEQGMKLW--DEMNERKVSPNAFTFSILITSLC 404
Query: 367 MSGKVEEAFELFNVMRSFSCLPDIVT----YNTLINGLCRVGNVDRAHELLREIQLHSEF 200
++ EA +L +R + DIV YN +I+G C+ GN+D A+ +++E+++
Sbjct: 405 KENRLNEARDL---LRQLNWREDIVPPPFIYNPVIDGFCKAGNIDEANAIVKEMEMKGCV 461
Query: 199 SPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALK 20
+ T+T +I G+C G+M +A ++++M++ G P+ T + +I K G A +
Sbjct: 462 HDKM-TFTILILGHCMKGRMFEAIGMYNKMLSIGCAPDNITISSLISCLRKAGMAREANE 520
Query: 19 MYEK 8
+ EK
Sbjct: 521 IQEK 524
>ref|XP_012828447.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Erythranthe guttata] gi|848930449|ref|XP_012828448.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Erythranthe guttata]
gi|604298483|gb|EYU18527.1| hypothetical protein
MIMGU_mgv1a003955mg [Erythranthe guttata]
Length = 552
Score = 444 bits (1142), Expect = e-151
Identities = 216/320 (67%), Positives = 262/320 (81%)
Frame = -3
Query: 964 SKASPASTLWFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNNPNLA 785
S +SP+ST WF+KVVCTLCIR S S +DYFR +L+P VA+ V+ HI RLNNP+LA
Sbjct: 33 SPSSPSSTFWFVKVVCTLCIRRSPSLAFVETDYFRVNLNPSVAFAVVYHINSRLNNPDLA 92
Query: 784 FSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIA 605
F+FFR +RL LNLIH E FDLLLRSLC+M HDSA+LVY YM++DG LP++++LDF+++
Sbjct: 93 FTFFRCSRLRLNLIHLEPTFDLLLRSLCQMGRHDSAELVYQYMKSDGFLPDSSVLDFVVS 152
Query: 604 SFANARKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLK 425
SFANA KFRIAE ILIA+AE CN++ E S V N FLS+L ++NR D+AV+ F+ H+L+
Sbjct: 153 SFANAGKFRIAEEILIARAEYCNEKDELVSSFVYNNFLSMLTNKNRIDDAVLFFKSHILR 212
Query: 424 SRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVD 245
+SF PD CSFN VMRGLC + KV++AFE F+VMRSFSC PD+VTYNTLINGLCRVG VD
Sbjct: 213 LKSFCPDTCSFNIVMRGLCRASKVDKAFEFFDVMRSFSCSPDLVTYNTLINGLCRVGKVD 272
Query: 244 RAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVI 65
RA ELLREI++ SEFS +VVTYTSVISGYCK GK + AA LF+EMIN GIRPNLFT+N I
Sbjct: 273 RAEELLREIKVQSEFSADVVTYTSVISGYCKLGKTDAAAFLFEEMINNGIRPNLFTFNAI 332
Query: 64 IDGFGKIGEVASALKMYEKM 5
IDGFGK GEVASA KMYE+M
Sbjct: 333 IDGFGKKGEVASASKMYERM 352
Score = 92.4 bits (228), Expect = 3e-17
Identities = 80/338 (23%), Positives = 140/338 (41%), Gaps = 37/338 (10%)
Frame = -3
Query: 904 RHSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNNPNL---AFSFFRYTRLSLNLIHSE 734
R ++ ++ ++Y E D V+ V N+ L N N A FF+ L L +
Sbjct: 161 RIAEEILIARAEYCNEK-DELVSSFVYNNFLSMLTNKNRIDDAVLFFKSHILRLKSFCPD 219
Query: 733 S-AFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKFRIAERILI 557
+ +F++++R LCR S D A + M + P+ + LI K AE +L
Sbjct: 220 TCSFNIVMRGLCRASKVDKAFEFFDVMRSFSCSPDLVTYNTLINGLCRVGKVDRAEELL- 278
Query: 556 AKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLF---------------------- 443
E+ Q + +S + D A LF
Sbjct: 279 --REIKVQSEFSADVVTYTSVISGYCKLGKTDAAAFLFEEMINNGIRPNLFTFNAIIDGF 336
Query: 442 --RGHM---------LKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDI 296
+G + + + F PD +F +++ G C G + + L N M P++
Sbjct: 337 GKKGEVASASKMYERMTATGFRPDVVTFTSLIDGHCRCGDLGQGIHLLNEMNEKRVSPNV 396
Query: 295 VTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFD 116
T++ LI+ LC+ ++ A +LL +++ + P Y VI GYCK+G +++A +
Sbjct: 397 FTFSVLISALCKENRLNEARDLLNQLKWREDIVPPPFVYNPVIDGYCKAGNVDEANAIVA 456
Query: 115 EMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMV 2
EM G + T+ ++I G G + A+ MY KM+
Sbjct: 457 EMEAKGCVHDKMTFTILILGHCMKGRMFEAIGMYNKML 494
Score = 78.6 bits (192), Expect = 1e-12
Identities = 61/242 (25%), Positives = 117/242 (48%), Gaps = 5/242 (2%)
Frame = -3
Query: 718 LLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKAELC 539
++ C++ D+A ++ M +GI PN + +I F + A ++ E
Sbjct: 297 VISGYCKLGKTDAAAFLFEEMINNGIRPNLFTFNAIIDGFGKKGEVASASKMY----ERM 352
Query: 538 NQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRG-HMLKS---RSFAPDNCSFNTVMRGL 371
G F P V F SL+ R + L +G H+L + +P+ +F+ ++ L
Sbjct: 353 TATG--FRPDVVT-FTSLIDGHCRCGD---LGQGIHLLNEMNEKRVSPNVFTFSVLISAL 406
Query: 370 CMSGKVEEAFELFNVMR-SFSCLPDIVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSP 194
C ++ EA +L N ++ +P YN +I+G C+ GNVD A+ ++ E++
Sbjct: 407 CKENRLNEARDLLNQLKWREDIVPPPFVYNPVIDGYCKAGNVDEANAIVAEMEAKGCVHD 466
Query: 193 NVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMY 14
+ T+T +I G+C G+M +A ++++M++ G P+ T + +I K G A ++
Sbjct: 467 KM-TFTILILGHCMKGRMFEAIGMYNKMLSVGCVPDNITMSSLISCLRKAGMAREANEIE 525
Query: 13 EK 8
+K
Sbjct: 526 QK 527
>ref|XP_009783824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Nicotiana sylvestris] gi|698470503|ref|XP_009783825.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Nicotiana sylvestris]
gi|698470507|ref|XP_009783826.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana sylvestris] gi|698470511|ref|XP_009783827.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Nicotiana sylvestris]
Length = 546
Score = 377 bits (967), Expect = e-125
Identities = 186/325 (57%), Positives = 240/325 (73%), Gaps = 4/325 (1%)
Frame = -3
Query: 967 SSKASPA---STLWFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNN 797
+SK+ P+ +WF KVVC LC HSQS VF SDYFR++LDP +A+ VI+HI LNN
Sbjct: 19 TSKSLPSYGPEAIWFTKVVCLLCFHHSQSLDVFTSDYFRQNLDPHIAFNVIHHINTNLNN 78
Query: 796 PNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLD 617
P LAF+FF++TR++LNL+H F+LLLRSLC+M HDSA LV+ YM+ADG L ++++L+
Sbjct: 79 PRLAFNFFKHTRVNLNLVHCIGTFNLLLRSLCQMGFHDSATLVFKYMKADGFLLDSSILE 138
Query: 616 FLIASFANARKFRIAERILIAKAELCNQRGE-TFSPSVCNKFLSLLISRNRFDEAVVLFR 440
++ + ANA KF IA+ ILI++AEL + G P V N LSLL+ RN+ DEAV F+
Sbjct: 139 SVLLALANAGKFGIAKEILISQAELGSDEGSFVVRPFVHNSLLSLLMKRNQVDEAVDFFK 198
Query: 439 GHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCR 260
H+L+S PD C+FN V+RGLC G V++AFE FN M SF C PDIVTYNTLINGLC
Sbjct: 199 DHILRSERLFPDTCTFNIVIRGLCRVGGVDKAFEFFNDMGSFDCFPDIVTYNTLINGLCG 258
Query: 259 VGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLF 80
VG VDRA LLR ++L +SP+VVTYTSVISGYCK G+M+DA NL DEMI GI P +
Sbjct: 259 VGQVDRARSLLRSLELQDGYSPDVVTYTSVISGYCKLGRMDDAINLMDEMITYGITPTMV 318
Query: 79 TYNVIIDGFGKIGEVASALKMYEKM 5
T+N++I+GFGKIG++ SA MYE+M
Sbjct: 319 TFNILINGFGKIGDMFSAQNMYERM 343
Score = 92.0 bits (227), Expect = 4e-17
Identities = 80/320 (25%), Positives = 139/320 (43%), Gaps = 38/320 (11%)
Frame = -3
Query: 847 PFVAYVVINHITHRLNNPNLAFSFFR-YTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKL 671
PFV +++ + R N + A FF+ + S L F++++R LCR+ D A
Sbjct: 174 PFVHNSLLSLLMKR-NQVDEAVDFFKDHILRSERLFPDTCTFNIVIRGLCRVGGVDKAFE 232
Query: 670 VYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKAELCNQRGETFSPSVCN--K 497
++ M + P+ + LI + A R L+ EL + +SP V
Sbjct: 233 FFNDMGSFDCFPDIVTYNTLINGLCGVGQVDRA-RSLLRSLEL----QDGYSPDVVTYTS 287
Query: 496 FLSLLISRNRFDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRS 317
+S R D+A+ L + + P +FN ++ G G + A ++ M +
Sbjct: 288 VISGYCKLGRMDDAINLM--DEMITYGITPTMVTFNILINGFGKIGDMFSAQNMYERMCA 345
Query: 316 FSCLPDIVTYNTLINGLCRVGNVDR----------------------------------- 242
F C PD+VT+ +LI+G CR G++D+
Sbjct: 346 FGCPPDVVTFTSLIDGHCRTGDLDQGLRLWDEMNTRNLWPNLYTFSVLIGALSRENRLNE 405
Query: 241 AHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVII 62
A ELLR++ L + P Y V+ G+CK+G + +A + EM + G + FT+ ++I
Sbjct: 406 ARELLRQLILRDDIVPQPFVYNPVLDGFCKAGNLNEANVIAAEMESKGCCHDKFTFTILI 465
Query: 61 DGFGKIGEVASALKMYEKMV 2
G G + A+ +Y+KM+
Sbjct: 466 LGHCMKGRMLEAMAIYDKMM 485
>ref|XP_009615517.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123061|ref|XP_009615518.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123063|ref|XP_009615519.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123065|ref|XP_009615520.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123067|ref|XP_009615521.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
Length = 546
Score = 376 bits (966), Expect = e-124
Identities = 185/325 (56%), Positives = 242/325 (74%), Gaps = 4/325 (1%)
Frame = -3
Query: 967 SSKASPA---STLWFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNN 797
+SK+ P+ +WF KVVC LC HSQS VF SD+FR++LDP +A+ VI+HI L N
Sbjct: 19 TSKSLPSYGPEAIWFTKVVCLLCFHHSQSLDVFTSDFFRQNLDPHIAFNVIHHINTNLRN 78
Query: 796 PNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLD 617
P LAF+FF++TR++LNLIH F+LLLRSLC+M HDSA LV+ YM+ADG+L ++++L+
Sbjct: 79 PRLAFNFFKHTRVNLNLIHCIGTFNLLLRSLCQMGFHDSAMLVFKYMKADGVLLDSSILE 138
Query: 616 FLIASFANARKFRIAERILIAKAELCNQRGETF-SPSVCNKFLSLLISRNRFDEAVVLFR 440
++ + ANA KF IA+ ILI++AEL ++ G P V N LSLL+ RN+ D AV F+
Sbjct: 139 IVVLALANAGKFGIAKEILISQAELGSEEGSVVVRPFVHNSLLSLLMKRNQVDGAVDFFK 198
Query: 439 GHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCR 260
H+L+S PD C+FN V+RGLC G V++AFE FN M SF C PD+VTYNTLINGLC
Sbjct: 199 DHILRSERLFPDTCTFNIVIRGLCRVGGVDKAFEFFNDMGSFDCFPDLVTYNTLINGLCG 258
Query: 259 VGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLF 80
VG VDRA LLR ++L +SP+VVTYTSVISGYCK G+M+DA NL DEMI GI PN+
Sbjct: 259 VGQVDRARGLLRSLELQDGYSPDVVTYTSVISGYCKLGRMDDAINLMDEMITYGISPNMV 318
Query: 79 TYNVIIDGFGKIGEVASALKMYEKM 5
T+N++I+GFGKIG++ SA KMYE+M
Sbjct: 319 TFNILINGFGKIGDMFSAQKMYERM 343
Score = 88.2 bits (217), Expect = 7e-16
Identities = 79/320 (24%), Positives = 140/320 (43%), Gaps = 38/320 (11%)
Frame = -3
Query: 847 PFVAYVVINHITHRLNNPNLAFSFFR-YTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKL 671
PFV +++ + R N + A FF+ + S L F++++R LCR+ D A
Sbjct: 174 PFVHNSLLSLLMKR-NQVDGAVDFFKDHILRSERLFPDTCTFNIVIRGLCRVGGVDKAFE 232
Query: 670 VYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKAELCNQRGETFSPSVCN--K 497
++ M + P+ + LI + A R L+ EL + +SP V
Sbjct: 233 FFNDMGSFDCFPDLVTYNTLINGLCGVGQVDRA-RGLLRSLEL----QDGYSPDVVTYTS 287
Query: 496 FLSLLISRNRFDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRS 317
+S R D+A+ L + + +P+ +FN ++ G G + A +++ M +
Sbjct: 288 VISGYCKLGRMDDAINLM--DEMITYGISPNMVTFNILINGFGKIGDMFSAQKMYERMCA 345
Query: 316 FSCLPDIVTYNTLINGLCRVGNVDR----------------------------------- 242
F C PD+VT +LI+G CR G++D+
Sbjct: 346 FGCPPDVVTLTSLIDGHCRTGDLDQGLRLWDEMNARNLWPNLYTFSVLIGAMSKENRLNE 405
Query: 241 AHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVII 62
A LLR++ L + P Y V+ G+CK+G + +A + EM + G + FT+ ++I
Sbjct: 406 ARVLLRQLILRDDIVPQPFVYNPVLDGFCKAGNLNEANVIAAEMESKGCCHDKFTFTILI 465
Query: 61 DGFGKIGEVASALKMYEKMV 2
G G + A+ +Y+KM+
Sbjct: 466 LGHCMKGRMLEAMAIYDKMM 485
>ref|XP_015062709.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
isoform X3 [Solanum pennellii]
Length = 510
Score = 372 bits (954), Expect = e-123
Identities = 186/328 (56%), Positives = 237/328 (72%), Gaps = 7/328 (2%)
Frame = -3
Query: 967 SSKASPA-------STLWFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITH 809
SSK+ P+ +WF KVVC LC HSQS VF SDYFR++LDP +A+ VI+HI
Sbjct: 22 SSKSIPSYGPGPGPEAVWFTKVVCLLCFHHSQSLDVFGSDYFRQNLDPHIAFTVIHHINT 81
Query: 808 RLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNN 629
LNNP LAF F + TR++LNL+H +F+LLLRSL +M HDSA LV+ YM+ADG L N
Sbjct: 82 NLNNPRLAFRFLQCTRINLNLVHCIGSFNLLLRSLSQMGFHDSAMLVFKYMKADGYLLEN 141
Query: 628 ALLDFLIASFANARKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVV 449
++L+ ++ + ANA KF IA+ ILI++AEL + G P V N LSLL+ R+R DEAV
Sbjct: 142 SILESVVLALANAGKFEIAKEILISQAELGREEGSIVRPFVHNSLLSLLMKRSRVDEAVD 201
Query: 448 LFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLING 269
F+ H+L+S PD C+FNTV+RGLC G V++AFE FN M SF C PD VTYNTLING
Sbjct: 202 FFKHHILRSDRLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLING 261
Query: 268 LCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRP 89
LC VG V+RA LL +QL SP+VVTYTS+ISGYCK G+M++A NL DEMI+ GI P
Sbjct: 262 LCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLGRMDEAINLMDEMISYGISP 321
Query: 88 NLFTYNVIIDGFGKIGEVASALKMYEKM 5
NL T+N++I+GFGKIG++ SA+KMY KM
Sbjct: 322 NLVTFNILINGFGKIGDMFSAIKMYGKM 349
Score = 90.1 bits (222), Expect = 2e-16
Identities = 70/303 (23%), Positives = 136/303 (44%), Gaps = 13/303 (4%)
Frame = -3
Query: 871 DYFREHL--------DPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLL 716
D+F+ H+ D VI + R+ + AF FF S ++ L
Sbjct: 201 DFFKHHILRSDRLFPDTCTFNTVIRGLC-RVGGVDKAFEFFNDMG-SFGCSPDTVTYNTL 258
Query: 715 LRSLCRMSLHDSAK-LVYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKAELC 539
+ LC + + A+ L+ + DG+ P+ LI+ + + E
Sbjct: 259 INGLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLGRMD----------EAI 308
Query: 538 NQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSR----SFAPDNCSFNTVMRGL 371
N E S + ++ I N F + +F + + + PD +F +++ G
Sbjct: 309 NLMDEMISYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLVDGY 368
Query: 370 CMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPN 191
C +G+V++ +L++ M S + P++ TY+ LI+ L + ++ A ELLR+++ + P
Sbjct: 369 CRTGEVDQGLKLWDDMNSRNLSPNLYTYSVLISALSKENRLNEARELLRQLKSRDDIVPQ 428
Query: 190 VVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYE 11
Y V+ G+CK+G + +A + EM + G + T+ ++I G G + AL +++
Sbjct: 429 PFLYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILILGHCMKGRMLEALAIFD 488
Query: 10 KMV 2
KM+
Sbjct: 489 KML 491
>ref|XP_015062693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
isoform X2 [Solanum pennellii]
gi|969996347|ref|XP_015062701.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Solanum pennellii]
Length = 529
Score = 372 bits (954), Expect = e-123
Identities = 186/328 (56%), Positives = 237/328 (72%), Gaps = 7/328 (2%)
Frame = -3
Query: 967 SSKASPA-------STLWFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITH 809
SSK+ P+ +WF KVVC LC HSQS VF SDYFR++LDP +A+ VI+HI
Sbjct: 22 SSKSIPSYGPGPGPEAVWFTKVVCLLCFHHSQSLDVFGSDYFRQNLDPHIAFTVIHHINT 81
Query: 808 RLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNN 629
LNNP LAF F + TR++LNL+H +F+LLLRSL +M HDSA LV+ YM+ADG L N
Sbjct: 82 NLNNPRLAFRFLQCTRINLNLVHCIGSFNLLLRSLSQMGFHDSAMLVFKYMKADGYLLEN 141
Query: 628 ALLDFLIASFANARKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVV 449
++L+ ++ + ANA KF IA+ ILI++AEL + G P V N LSLL+ R+R DEAV
Sbjct: 142 SILESVVLALANAGKFEIAKEILISQAELGREEGSIVRPFVHNSLLSLLMKRSRVDEAVD 201
Query: 448 LFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLING 269
F+ H+L+S PD C+FNTV+RGLC G V++AFE FN M SF C PD VTYNTLING
Sbjct: 202 FFKHHILRSDRLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLING 261
Query: 268 LCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRP 89
LC VG V+RA LL +QL SP+VVTYTS+ISGYCK G+M++A NL DEMI+ GI P
Sbjct: 262 LCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLGRMDEAINLMDEMISYGISP 321
Query: 88 NLFTYNVIIDGFGKIGEVASALKMYEKM 5
NL T+N++I+GFGKIG++ SA+KMY KM
Sbjct: 322 NLVTFNILINGFGKIGDMFSAIKMYGKM 349
Score = 90.1 bits (222), Expect = 2e-16
Identities = 70/303 (23%), Positives = 136/303 (44%), Gaps = 13/303 (4%)
Frame = -3
Query: 871 DYFREHL--------DPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLL 716
D+F+ H+ D VI + R+ + AF FF S ++ L
Sbjct: 201 DFFKHHILRSDRLFPDTCTFNTVIRGLC-RVGGVDKAFEFFNDMG-SFGCSPDTVTYNTL 258
Query: 715 LRSLCRMSLHDSAK-LVYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKAELC 539
+ LC + + A+ L+ + DG+ P+ LI+ + + E
Sbjct: 259 INGLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLGRMD----------EAI 308
Query: 538 NQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSR----SFAPDNCSFNTVMRGL 371
N E S + ++ I N F + +F + + + PD +F +++ G
Sbjct: 309 NLMDEMISYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLVDGY 368
Query: 370 CMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPN 191
C +G+V++ +L++ M S + P++ TY+ LI+ L + ++ A ELLR+++ + P
Sbjct: 369 CRTGEVDQGLKLWDDMNSRNLSPNLYTYSVLISALSKENRLNEARELLRQLKSRDDIVPQ 428
Query: 190 VVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYE 11
Y V+ G+CK+G + +A + EM + G + T+ ++I G G + AL +++
Sbjct: 429 PFLYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILILGHCMKGRMLEALAIFD 488
Query: 10 KMV 2
KM+
Sbjct: 489 KML 491
Score = 58.9 bits (141), Expect = 4e-06
Identities = 43/173 (24%), Positives = 76/173 (43%)
Frame = -3
Query: 727 FDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKA 548
F L+ CR D ++ M + + PN LI++ + + A +L
Sbjct: 361 FTSLVDGYCRTGEVDQGLKLWDDMNSRNLSPNLYTYSVLISALSKENRLNEARELL---R 417
Query: 547 ELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLC 368
+L ++ P + N L EA V+ ++S+ D +F ++ G C
Sbjct: 418 QLKSRDDIVPQPFLYNPVLDGFCKAGNLSEANVI--AAEMESKGCCHDKITFTILILGHC 475
Query: 367 MSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLREIQLH 209
M G++ EA +F+ M S C+PD +T + L + L + G V A++ LR + H
Sbjct: 476 MKGRMLEALAIFDKMLSLGCVPDDITVSCLTSCLLKAGMVKEAYKDLRRLLQH 528
>ref|XP_015062668.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
isoform X1 [Solanum pennellii]
gi|969996341|ref|XP_015062677.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Solanum pennellii]
gi|969996343|ref|XP_015062684.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Solanum pennellii]
Length = 552
Score = 372 bits (954), Expect = e-123
Identities = 186/328 (56%), Positives = 237/328 (72%), Gaps = 7/328 (2%)
Frame = -3
Query: 967 SSKASPA-------STLWFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITH 809
SSK+ P+ +WF KVVC LC HSQS VF SDYFR++LDP +A+ VI+HI
Sbjct: 22 SSKSIPSYGPGPGPEAVWFTKVVCLLCFHHSQSLDVFGSDYFRQNLDPHIAFTVIHHINT 81
Query: 808 RLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNN 629
LNNP LAF F + TR++LNL+H +F+LLLRSL +M HDSA LV+ YM+ADG L N
Sbjct: 82 NLNNPRLAFRFLQCTRINLNLVHCIGSFNLLLRSLSQMGFHDSAMLVFKYMKADGYLLEN 141
Query: 628 ALLDFLIASFANARKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVV 449
++L+ ++ + ANA KF IA+ ILI++AEL + G P V N LSLL+ R+R DEAV
Sbjct: 142 SILESVVLALANAGKFEIAKEILISQAELGREEGSIVRPFVHNSLLSLLMKRSRVDEAVD 201
Query: 448 LFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLING 269
F+ H+L+S PD C+FNTV+RGLC G V++AFE FN M SF C PD VTYNTLING
Sbjct: 202 FFKHHILRSDRLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLING 261
Query: 268 LCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRP 89
LC VG V+RA LL +QL SP+VVTYTS+ISGYCK G+M++A NL DEMI+ GI P
Sbjct: 262 LCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLGRMDEAINLMDEMISYGISP 321
Query: 88 NLFTYNVIIDGFGKIGEVASALKMYEKM 5
NL T+N++I+GFGKIG++ SA+KMY KM
Sbjct: 322 NLVTFNILINGFGKIGDMFSAIKMYGKM 349
Score = 90.1 bits (222), Expect = 2e-16
Identities = 70/303 (23%), Positives = 136/303 (44%), Gaps = 13/303 (4%)
Frame = -3
Query: 871 DYFREHL--------DPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLL 716
D+F+ H+ D VI + R+ + AF FF S ++ L
Sbjct: 201 DFFKHHILRSDRLFPDTCTFNTVIRGLC-RVGGVDKAFEFFNDMG-SFGCSPDTVTYNTL 258
Query: 715 LRSLCRMSLHDSAK-LVYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKAELC 539
+ LC + + A+ L+ + DG+ P+ LI+ + + E
Sbjct: 259 INGLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLGRMD----------EAI 308
Query: 538 NQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSR----SFAPDNCSFNTVMRGL 371
N E S + ++ I N F + +F + + + PD +F +++ G
Sbjct: 309 NLMDEMISYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLVDGY 368
Query: 370 CMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPN 191
C +G+V++ +L++ M S + P++ TY+ LI+ L + ++ A ELLR+++ + P
Sbjct: 369 CRTGEVDQGLKLWDDMNSRNLSPNLYTYSVLISALSKENRLNEARELLRQLKSRDDIVPQ 428
Query: 190 VVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYE 11
Y V+ G+CK+G + +A + EM + G + T+ ++I G G + AL +++
Sbjct: 429 PFLYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILILGHCMKGRMLEALAIFD 488
Query: 10 KMV 2
KM+
Sbjct: 489 KML 491
>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Solanum lycopersicum] gi|723664227|ref|XP_010315007.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Solanum lycopersicum]
Length = 550
Score = 371 bits (952), Expect = e-122
Identities = 186/326 (57%), Positives = 235/326 (72%), Gaps = 5/326 (1%)
Frame = -3
Query: 967 SSKASPA-----STLWFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITHRL 803
SSK+ P+ +WF KVVC LC HSQS VF SDYFR++LDP +A+ VI+HI L
Sbjct: 22 SSKSIPSYGPGPEAVWFTKVVCLLCFHHSQSLDVFGSDYFRQNLDPHIAFTVIHHINTNL 81
Query: 802 NNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNAL 623
NNP LAF F + TR++LNLIH +F+LLLRSL +M HDSA LV+ YM+ADG L N++
Sbjct: 82 NNPRLAFRFLQCTRINLNLIHCIGSFNLLLRSLSQMGFHDSAMLVFKYMKADGYLLENSI 141
Query: 622 LDFLIASFANARKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLF 443
L+ ++ + ANA KF IA+ ILI++AEL + G P V N LSLL+ R+R DEAV F
Sbjct: 142 LESVVLALANAGKFEIAKEILISQAELGREEGSIVRPFVHNSLLSLLMKRSRVDEAVDFF 201
Query: 442 RGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLC 263
+ H+L+S PD C+FNTV+RGLC G V++AFE FN M SF C PD VTYNTLINGLC
Sbjct: 202 KHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLINGLC 261
Query: 262 RVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNL 83
VG V+RA LL +QL SP+VVTYTS+ISGYCK +M++A NL DEMI GI PNL
Sbjct: 262 AVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLSRMDEAINLMDEMITYGISPNL 321
Query: 82 FTYNVIIDGFGKIGEVASALKMYEKM 5
T+N++I+GFGKIG++ SA+KMY KM
Sbjct: 322 VTFNILINGFGKIGDMFSAIKMYGKM 347
Score = 87.4 bits (215), Expect = 1e-15
Identities = 72/316 (22%), Positives = 141/316 (44%), Gaps = 34/316 (10%)
Frame = -3
Query: 847 PFVAYVVINHITHRLNNPNLAFSFFRYTRL-SLNLIHSESAFDLLLRSLCRMSLHDSAKL 671
PFV +++ + R + + A FF++ L S L F+ ++R LCR+ D A
Sbjct: 178 PFVHNSLLSLLMKR-SRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFE 236
Query: 670 VYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKAELCNQRGETFSPSVCNKFL 491
++ M + G P+ + LI + A+ +L L Q G + +
Sbjct: 237 FFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLL---GNLQLQDGLSPDVVTYTSLI 293
Query: 490 SLLISRNRFDEAV-------------------VLFRGH--------------MLKSRSFA 410
S +R DEA+ +L G + + +
Sbjct: 294 SGYCKLSRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYP 353
Query: 409 PDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHEL 230
PD +F +++ G C +G++++ +L++ M S + P++ T++ LI+ L + ++ A EL
Sbjct: 354 PDVVTFTSLIDGYCRTGELDQGLKLWDDMNSRNLSPNLYTFSVLISALSKENRLNEAREL 413
Query: 229 LREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFG 50
LR+++ + P Y V+ G+CK+G + +A + EM + G + T+ ++I G
Sbjct: 414 LRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILILGHC 473
Query: 49 KIGEVASALKMYEKMV 2
G + AL +++KM+
Sbjct: 474 MKGRMLEALAIFDKML 489
Score = 74.7 bits (182), Expect = 2e-11
Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 4/238 (1%)
Frame = -3
Query: 718 LLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKAELC 539
L+ C++S D A + M GI PN + LI F A ++ ++C
Sbjct: 292 LISGYCKLSRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAIKMY---GKMC 348
Query: 538 NQRGETFSPSVCNKFLSLLISRNR---FDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLC 368
+ P V F SL+ R D+ + L+ + SR+ +P+ +F+ ++ L
Sbjct: 349 ---AVGYPPDVVT-FTSLIDGYCRTGELDQGLKLWDD--MNSRNLSPNLYTFSVLISALS 402
Query: 367 MSGKVEEAFELFNVMRSFS-CLPDIVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPN 191
++ EA EL ++S +P YN +++G C+ GN+ A+ + E++ +
Sbjct: 403 KENRLNEARELLRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSEANVIAAEMESKG-CCHD 461
Query: 190 VVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKM 17
+T+T +I G+C G+M +A +FD+M++ G P+ T + + K G V A K+
Sbjct: 462 KITFTILILGHCMKGRMLEALAIFDKMLSLGCVPDDITISCLTSCLLKAGMVKEAYKV 519
Score = 58.9 bits (141), Expect = 4e-06
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 2/181 (1%)
Frame = -3
Query: 727 FDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKA 548
F L+ CR D ++ M + + PN LI++ + + A +L
Sbjct: 359 FTSLIDGYCRTGELDQGLKLWDDMNSRNLSPNLYTFSVLISALSKENRLNEARELL---R 415
Query: 547 ELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLC 368
+L ++ P V N L EA V+ ++S+ D +F ++ G C
Sbjct: 416 QLKSRDDIVPQPFVYNPVLDGFCKAGNLSEANVI--AAEMESKGCCHDKITFTILILGHC 473
Query: 367 MSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHE--LLREIQLHSEFSP 194
M G++ EA +F+ M S C+PD +T + L + L + G V A++ L+ L+ + SP
Sbjct: 474 MKGRMLEALAIFDKMLSLGCVPDDITISCLTSCLLKAGMVKEAYKVRLIPSKDLNPDLSP 533
Query: 193 N 191
+
Sbjct: 534 S 534
>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Solanum tuberosum] gi|565370447|ref|XP_006351832.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Solanum tuberosum]
Length = 550
Score = 366 bits (940), Expect = e-120
Identities = 181/326 (55%), Positives = 235/326 (72%), Gaps = 5/326 (1%)
Frame = -3
Query: 967 SSKASPA-----STLWFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITHRL 803
SSK+ P+ +WF KVVC LC HSQS VF SDYFR++LDP +A+ VI+HI L
Sbjct: 22 SSKSIPSYGPGPEAVWFTKVVCLLCFHHSQSLDVFGSDYFRQNLDPHIAFTVIHHINTNL 81
Query: 802 NNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNAL 623
NNP LAF F + TR++LNL+H +F+LLLRSL +M HDSA LV+ +M+ADG L N++
Sbjct: 82 NNPRLAFRFLQCTRINLNLVHCIGSFNLLLRSLSQMGFHDSAMLVFKFMKADGYLLENSI 141
Query: 622 LDFLIASFANARKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLF 443
L+ ++ + ANA KF IA+ ILI++AEL + G P V N LSLL+ R+R DEAV F
Sbjct: 142 LESVVLALANAGKFEIAKEILISQAELGREEGRIVRPFVHNSLLSLLMKRSRVDEAVDFF 201
Query: 442 RGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLC 263
+ H+L+S PD C+FNTV+RGLC G V++AFE FN M SF C PD VTYNTLINGLC
Sbjct: 202 KHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCFPDTVTYNTLINGLC 261
Query: 262 RVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNL 83
VG V+RA LL ++L SP+VVTYTSVI+GYCK G+M++A NL DEM GI PNL
Sbjct: 262 SVGQVNRARGLLGNLELQDGLSPDVVTYTSVIAGYCKLGRMDEAINLMDEMTTYGISPNL 321
Query: 82 FTYNVIIDGFGKIGEVASALKMYEKM 5
T+N++I+GFGKIG++ SA++MY +M
Sbjct: 322 VTFNILINGFGKIGDMFSAIQMYGRM 347
Score = 85.9 bits (211), Expect = 4e-15
Identities = 70/313 (22%), Positives = 140/313 (44%), Gaps = 31/313 (9%)
Frame = -3
Query: 847 PFVAYVVINHITHRLNNPNLAFSFFRYTRL-SLNLIHSESAFDLLLRSLCRMSLHDSAKL 671
PFV +++ + R + + A FF++ L S L F+ ++R LCR+ D A
Sbjct: 178 PFVHNSLLSLLMKR-SRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFE 236
Query: 670 VYHYMEADGILPNNALLDFLIASFANARKFRIAERIL-------------------IA-- 554
++ M + G P+ + LI + + A +L IA
Sbjct: 237 FFNDMGSFGCFPDTVTYNTLINGLCSVGQVNRARGLLGNLELQDGLSPDVVTYTSVIAGY 296
Query: 553 -----KAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSR----SFAPDN 401
E N E + + ++ I N F + +F + R + PD
Sbjct: 297 CKLGRMDEAINLMDEMTTYGISPNLVTFNILINGFGKIGDMFSAIQMYGRMCAVGYPPDV 356
Query: 400 CSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLRE 221
+F +++ G C +G++++ +L++ M + + P++ T++ LI+ L + ++ A ELLR+
Sbjct: 357 VTFTSLIDGYCRTGELDQGLKLWDEMNTRNLSPNLYTFSILISALSKENRLNEARELLRQ 416
Query: 220 IQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIG 41
++ + P Y V+ G+CK+G + A + EM + G + T+ ++I G G
Sbjct: 417 LKSRDDIVPQPFVYNPVLDGFCKAGNLSKANVIAAEMESRGCCHDKITFTILILGHCMKG 476
Query: 40 EVASALKMYEKMV 2
+ A+ +++KM+
Sbjct: 477 RMLEAMAIFDKML 489
>gb|KVI07821.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus var.
scolymus]
Length = 562
Score = 330 bits (847), Expect = e-106
Identities = 167/320 (52%), Positives = 218/320 (68%), Gaps = 4/320 (1%)
Frame = -3
Query: 949 ASTLWFIKVVCTLCIRHSQSFV-VFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFF 773
AS++WF+KVVCTL +R S V SDY R++L+ A+ VI H+ NNPNLAFSF
Sbjct: 46 ASSVWFVKVVCTLYVRRKSSVKEVRVSDYLRKNLNSLTAFSVIKHMNSNWNNPNLAFSFL 105
Query: 772 RYTRLSLNLIHSESAFDLLLRS---LCRMSLHDSAKLVYHYMEADGILPNNALLDFLIAS 602
YT+ +LNL+HS + LLRS + ++ +HD AK V M D +LP+++LL F+I S
Sbjct: 106 EYTKNTLNLVHSTETYSFLLRSFGYVTQVGVHDLAKKVIDLMRIDEVLPDSSLLGFVITS 165
Query: 601 FANARKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKS 422
F NA KF +A+ +++ + ++ E S V NK LS L+ N DEAV F +L+
Sbjct: 166 FVNAGKFEVAKELMVDHSRSSVEKDEVLSCVVFNKLLSSLVKSNHMDEAVSFFENIILRL 225
Query: 421 RSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDR 242
+ ++PD C+FN V+ LC + +V++AF +FN MR F C PD+VTYNTL+NG CR GNVD+
Sbjct: 226 KCYSPDACTFNIVISALCRAREVDKAFSIFNKMRKFGCFPDLVTYNTLLNGFCRAGNVDK 285
Query: 241 AHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVII 62
AHELLRE + SPNVVT+TSVISGYCK GKME+A LFD MI GIRPN T+NVII
Sbjct: 286 AHELLRETCMVDGCSPNVVTFTSVISGYCKLGKMEEAMVLFDNMIGHGIRPNTVTFNVII 345
Query: 61 DGFGKIGEVASALKMYEKMV 2
DGFGKIG + S L MYEKMV
Sbjct: 346 DGFGKIGNMVSVLNMYEKMV 365
Score = 103 bits (256), Expect = 6e-21
Identities = 84/348 (24%), Positives = 156/348 (44%), Gaps = 39/348 (11%)
Frame = -3
Query: 928 KVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITHRL---NNPNLAFSFFRYTRL 758
+V L + HS+S V D ++ VV N + L N+ + A SFF L
Sbjct: 173 EVAKELMVDHSRSSV---------EKDEVLSCVVFNKLLSSLVKSNHMDEAVSFFENIIL 223
Query: 757 SLNLIHSESA-FDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKF 581
L ++ F++++ +LCR D A +++ M G P+ + L+ F A
Sbjct: 224 RLKCYSPDACTFNIVISALCRAREVDKAFSIFNKMRKFGCFPDLVTYNTLLNGFCRAGNV 283
Query: 580 RIAERIL--IAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFR---GHMLKSRS 416
A +L + C+ TF+ SV + + L + +EA+VLF GH ++ +
Sbjct: 284 DKAHELLRETCMVDGCSPNVVTFT-SVISGYCKL----GKMEEAMVLFDNMIGHGIRPNT 338
Query: 415 FA------------------------------PDNCSFNTVMRGLCMSGKVEEAFELFNV 326
PD +F +++ G C G++++ ++++
Sbjct: 339 VTFNVIIDGFGKIGNMVSVLNMYEKMVDLGCTPDVITFTSIIDGHCRLGELQQGLKIWDE 398
Query: 325 MRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSG 146
M + P+I T++ LIN LC G ++ A +LLR+++ + P Y VI G+CK+G
Sbjct: 399 MNRRNLYPNIYTFSILINTLCEKGRLNEACDLLRQLKKRDDIVPKTFVYIPVIDGFCKAG 458
Query: 145 KMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMV 2
++ A + EM +P+ T+ ++I G G + A+ +++KM+
Sbjct: 459 NVDKANAIVKEMEEKRCKPDKVTFTILIIGHCMKGRMIEAISLFQKML 506
>emb|CDO97508.1| unnamed protein product [Coffea canephora]
Length = 322
Score = 318 bits (814), Expect = e-105
Identities = 158/301 (52%), Positives = 211/301 (70%)
Frame = -3
Query: 949 ASTLWFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFFR 770
A T+WFIKV HL+P +A+ VI HI + +NP LAF FF+
Sbjct: 35 AETIWFIKV----------------------HLNPSIAFFVIQHINNHFSNPRLAFEFFQ 72
Query: 769 YTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANA 590
+TRL+L+L+HS S F+LLL SLC++ D A+L+ Y DG+L + ++++FL++ FANA
Sbjct: 73 FTRLNLSLVHSVSTFNLLLMSLCQIGFFDLAQLMLDYTITDGLLLDGSVVEFLVSCFANA 132
Query: 589 RKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSRSFA 410
KFRI + +LI++A L +++ E S N LS+L+ RNR DEAV F+ H+L R F
Sbjct: 133 GKFRICKEVLISQANLSSEKEEVVSSFAHNILLSMLVKRNRVDEAVQFFQDHILILRGFC 192
Query: 409 PDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHEL 230
PD CSFN V+RGLC G+V++AF+LF M SF C PD++TYN+LINGLC VGN+DRA L
Sbjct: 193 PDTCSFNIVIRGLCKGGQVDKAFQLFYDMGSFGCSPDMITYNSLINGLCTVGNLDRALCL 252
Query: 229 LREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFG 50
LR+IQ +P+VVTYTS+ISG CKSGKME+AA+L DEM+ CGIRPNL T+NV+IDGFG
Sbjct: 253 LRDIQSQVGVAPDVVTYTSIISGLCKSGKMEEAASLLDEMVQCGIRPNLITFNVLIDGFG 312
Query: 49 K 47
K
Sbjct: 313 K 313
>gb|KVI07824.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 557
Score = 318 bits (814), Expect = e-101
Identities = 159/317 (50%), Positives = 217/317 (68%), Gaps = 1/317 (0%)
Frame = -3
Query: 949 ASTLWFIKVVCTLCIRHSQSFV-VFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFF 773
A+++WF+KVVCTL +R S V DY R++L+ A+ VI H++ NNP LAFSF
Sbjct: 44 ATSVWFVKVVCTLYVRRKSSMEEVRILDYLRKNLNSLTAFSVIEHMSSNWNNPKLAFSFL 103
Query: 772 RYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFAN 593
YT+ +LNL+ S + LLRS ++ +HD AKL+ M DG+ P+N+LL F+I SF N
Sbjct: 104 EYTKNTLNLVPSIETYSFLLRSFSQVGVHDLAKLLIDLMRIDGVSPDNSLLGFVIKSFVN 163
Query: 592 ARKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSRSF 413
A KF +A+ +++ + ++ S V NK LS L+ N+ DEAV F +L+S+ +
Sbjct: 164 AGKFEVAKELIVDSSRSSVEKDGVLSCIVVNKILSSLVKSNQVDEAVAFFENIILRSQCY 223
Query: 412 APDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHE 233
+ + +FN V+ GLC + +V++AF FN MR F CLPD+VTYNTL+NG CR GNV++AH+
Sbjct: 224 SHNAYTFNIVISGLCRAREVDKAFGFFNHMRMFGCLPDVVTYNTLLNGFCRAGNVNKAHD 283
Query: 232 LLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGF 53
LLRE + SPNVVT+TSVISGYCK GKME+A LF +MI+ GI P+ FT+NVIIDGF
Sbjct: 284 LLRETSMVDGCSPNVVTFTSVISGYCKLGKMEEAMVLFSDMISHGIXPSTFTFNVIIDGF 343
Query: 52 GKIGEVASALKMYEKMV 2
GKIG + S L MYEKMV
Sbjct: 344 GKIGNMVSVLNMYEKMV 360
Score = 99.8 bits (247), Expect = 9e-20
Identities = 78/322 (24%), Positives = 145/322 (45%), Gaps = 39/322 (12%)
Frame = -3
Query: 850 DPFVAYVVINHITHRL---NNPNLAFSFFRYTRL-SLNLIHSESAFDLLLRSLCRMSLHD 683
D ++ +V+N I L N + A +FF L S H+ F++++ LCR D
Sbjct: 185 DGVLSCIVVNKILSSLVKSNQVDEAVAFFENIILRSQCYSHNAYTFNIVISGLCRAREVD 244
Query: 682 SAKLVYHYMEADGILPNNALLDFLIASFANARKFRIAERIL--IAKAELCNQRGETFSPS 509
A +++M G LP+ + L+ F A A +L + + C+ TF+ S
Sbjct: 245 KAFGFFNHMRMFGCLPDVVTYNTLLNGFCRAGNVNKAHDLLRETSMVDGCSPNVVTFT-S 303
Query: 508 VCNKFLSLLISRNRFDEAVVLFR------------------------GHMLK-------- 425
V + + L + +EA+VLF G+M+
Sbjct: 304 VISGYCKL----GKMEEAMVLFSDMISHGIXPSTFTFNVIIDGFGKIGNMVSVLNMYEKM 359
Query: 424 -SRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNV 248
PD +F +++ G C G+V + ++++ M + P+I T++ LIN LC+ +
Sbjct: 360 VDHGCTPDVITFTSIIDGHCRLGEVHQGLKIWDEMNRRNLYPNIYTFSILINTLCKZXRL 419
Query: 247 DRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNV 68
+ A +LL +++ + P Y VI G+CK+G +++A + EM P+ T+ +
Sbjct: 420 NEARDLLXQLKKRXDIIPKAFVYNPVIDGFCKAGNVDEANVIVKEMEEKRCYPDKLTFTI 479
Query: 67 IIDGFGKIGEVASALKMYEKMV 2
+I G G + A+ +++KM+
Sbjct: 480 LIIGHCMKGRMIEAISLFQKMI 501
Score = 85.5 bits (210), Expect = 6e-15
Identities = 71/296 (23%), Positives = 132/296 (44%), Gaps = 3/296 (1%)
Frame = -3
Query: 895 QSFVVFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLL 716
++F FN L V Y + + R N N A R T + + F +
Sbjct: 245 KAFGFFNHMRMFGCLPDVVTYNTLLNGFCRAGNVNKAHDLLRETSMVDGCSPNVVTFTSV 304
Query: 715 LRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKA-ELC 539
+ C++ + A +++ M + GI P+ + +I F +I + + E
Sbjct: 305 ISGYCKLGKMEEAMVLFSDMISHGIXPSTFTFNVIIDGFG-----KIGNMVSVLNMYEKM 359
Query: 538 NQRGETFSPSVCNKFLSLLISRNRFDEAVVLFR-GHMLKSRSFAPDNCSFNTVMRGLCMS 362
G T P V F S++ R E + + R+ P+ +F+ ++ LC
Sbjct: 360 VDHGCT--PDVIT-FTSIIDGHCRLGEVHQGLKIWDEMNRRNLYPNIYTFSILINTLCKZ 416
Query: 361 GKVEEAFELFNVMRS-FSCLPDIVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVV 185
++ EA +L ++ +P YN +I+G C+ GNVD A+ +++E++ P+ +
Sbjct: 417 XRLNEARDLLXQLKKRXDIIPKAFVYNPVIDGFCKAGNVDEANVIVKEME-EKRCYPDKL 475
Query: 184 TYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKM 17
T+T +I G+C G+M +A +LF +MI G P+ T N ++ K G + A ++
Sbjct: 476 TFTILIIGHCMKGRMIEAISLFQKMIVXGCAPDSITVNSLVSRLLKAGMLKEAFEI 531
>gb|KVI07848.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus var.
scolymus]
Length = 746
Score = 317 bits (811), Expect = 4e-99
Identities = 158/317 (49%), Positives = 214/317 (67%), Gaps = 1/317 (0%)
Frame = -3
Query: 949 ASTLWFIKVVCTLCIRHSQSFV-VFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFF 773
A+++WF+KVVCTL +R S V DY R++L+ A+ VI H+ NNP LAFSF
Sbjct: 159 ATSVWFVKVVCTLYVRRKSSMEEVRILDYLRKNLNSLTAFSVIEHMNSNWNNPKLAFSFL 218
Query: 772 RYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFAN 593
YT+ +LNL+H + LLRS ++ HD AKL+ M +G+ P+ +LL F+I SF N
Sbjct: 219 EYTKNTLNLVHLIETYSFLLRSFSQVGXHDLAKLLIDLMRIBGVSPDXSLLGFVIKSFVN 278
Query: 592 ARKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSRSF 413
A KF +A+ +++ + ++ S V NK LS L+ NR DEAV F +L+S+ +
Sbjct: 279 AGKFEVAKELIVDSSRSSVEKDGVLSCIVVNKILSSLVKSNRVDEAVAFFENIILRSQCY 338
Query: 412 APDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHE 233
+ + +FN V+ GLC + +V++AF FN MR F CLPD+VTYNTL+NG CR GNV++AH+
Sbjct: 339 SHNAYTFNIVISGLCRAREVDKAFGFFNHMRKFGCLPDVVTYNTLLNGFCRAGNVNKAHD 398
Query: 232 LLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGF 53
LLRE + SPNVVT+TSVISGYCK GKME+A LF +MI+ GI P+ FT+NVIIDGF
Sbjct: 399 LLRETSMVDGCSPNVVTFTSVISGYCKLGKMEEAMVLFSDMISHGIXPSTFTFNVIIDGF 458
Query: 52 GKIGEVASALKMYEKMV 2
GKIG + S L MYEKMV
Sbjct: 459 GKIGNMVSVLNMYEKMV 475
Score = 105 bits (261), Expect = 2e-21
Identities = 80/322 (24%), Positives = 147/322 (45%), Gaps = 39/322 (12%)
Frame = -3
Query: 850 DPFVAYVVINHITHRL---NNPNLAFSFFRYTRL-SLNLIHSESAFDLLLRSLCRMSLHD 683
D ++ +V+N I L N + A +FF L S H+ F++++ LCR D
Sbjct: 300 DGVLSCIVVNKILSSLVKSNRVDEAVAFFENIILRSQCYSHNAYTFNIVISGLCRAREVD 359
Query: 682 SAKLVYHYMEADGILPNNALLDFLIASFANARKFRIAERIL--IAKAELCNQRGETFSPS 509
A +++M G LP+ + L+ F A A +L + + C+ TF+ S
Sbjct: 360 KAFGFFNHMRKFGCLPDVVTYNTLLNGFCRAGNVNKAHDLLRETSMVDGCSPNVVTFT-S 418
Query: 508 VCNKFLSLLISRNRFDEAVVLFR------------------------GHMLK-------- 425
V + + L + +EA+VLF G+M+
Sbjct: 419 VISGYCKL----GKMEEAMVLFSDMISHGIXPSTFTFNVIIDGFGKIGNMVSVLNMYEKM 474
Query: 424 -SRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNV 248
PD +F +++ G C G+V + ++++ M + P+I T++ LIN LC+ +
Sbjct: 475 VDHGCTPDVITFTSIIDGHCRLGEVHQGLKIWDEMNRXNLYPNIYTFSILINTLCKENRL 534
Query: 247 DRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNV 68
+ A +LLR+++ S+ P Y VI G+CK+G +++A + EM P+ T+ +
Sbjct: 535 NEARDLLRQLKKRSDIIPKAFVYNPVIDGFCKAGNVDEANVIVKEMEEKRCYPDKLTFTI 594
Query: 67 IIDGFGKIGEVASALKMYEKMV 2
+I G G + A+ +++KM+
Sbjct: 595 LIIGHCMKGRMIEAISLFQKMI 616
>ref|XP_010276672.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Nelumbo nucifera]
Length = 586
Score = 305 bits (782), Expect = 1e-96
Identities = 157/312 (50%), Positives = 211/312 (67%)
Frame = -3
Query: 937 WFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFFRYTRL 758
W +KV+CTLC+R S DYF ++L+P +AY VI RL NPNL+ F ++R+
Sbjct: 85 WVVKVICTLCVRSSSLDTCL--DYFSKNLNPSIAYEVIK----RLRNPNLSLKLFEFSRV 138
Query: 757 SLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKFR 578
L + HS ++ L++SL M LHD+AK+V+ M DG LP++++L FL++S A A K
Sbjct: 139 KLEIRHSVRTYNFLVKSLSEMGLHDAAKVVFDCMRNDGHLPDSSILAFLLSSCARAGKLD 198
Query: 577 IAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSRSFAPDNC 398
I + ++ L N G +P V N L +L+ NR EAV L R H+ S F PD C
Sbjct: 199 ITKSLI--SQVLGN--GIEVNPFVYNNLLEILVKSNRVQEAVCLLREHL--SSCFRPDTC 252
Query: 397 SFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLREI 218
+FN V++GLC G+V+ AFE+F+ M SF C PD+VTYNTLINGLCR +VDR H LL EI
Sbjct: 253 TFNIVIKGLCRIGEVDRAFEIFDDMGSFGCCPDVVTYNTLINGLCRASDVDRGHRLLMEI 312
Query: 217 QLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGE 38
Q +S+FS +VVTYTS+I GYCK GKME+A+NL+DEM+ G PN+ TYN +IDGF KIGE
Sbjct: 313 QSNSKFSLDVVTYTSLIKGYCKLGKMEEASNLYDEMVRSGTEPNVITYNTLIDGFSKIGE 372
Query: 37 VASALKMYEKMV 2
V SA+ MYEK++
Sbjct: 373 VGSAMVMYEKLL 384
Score = 90.5 bits (223), Expect = 1e-16
Identities = 65/245 (26%), Positives = 115/245 (46%), Gaps = 10/245 (4%)
Frame = -3
Query: 745 IHSESAFDL-------LLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAR 587
I S S F L L++ C++ + A +Y M G PN + LI F+
Sbjct: 312 IQSNSKFSLDVVTYTSLIKGYCKLGKMEEASNLYDEMVRSGTEPNVITYNTLIDGFSKIG 371
Query: 586 KFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNR---FDEAVVLFRGHMLKSRS 416
+ A ++ K L + P V F SL+ + R DE + L+ H +++R+
Sbjct: 372 EVGSA-MVMYEKLLL-----QGCFPDVVT-FTSLIDAHCRSGQIDEGIKLW--HEMQTRN 422
Query: 415 FAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAH 236
+P+ +F+ ++ LC ++ EA L ++ +P YN +I+G C+ GN+D A+
Sbjct: 423 ISPNAHTFHVLINSLCKENRLNEARGLLRQLKWTDIVPQAFVYNPVIDGFCKAGNIDEAN 482
Query: 235 ELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDG 56
++ E++ + T+T +I G+C GKM +A N+F +M+N P+ T +
Sbjct: 483 AIVAEME-EKRCKLDTYTFTILIIGHCMKGKMHEAINIFHKMLNSNCPPDTITVQALTSC 541
Query: 55 FGKIG 41
K G
Sbjct: 542 LFKAG 546
Score = 80.1 bits (196), Expect = 4e-13
Identities = 63/279 (22%), Positives = 126/279 (45%), Gaps = 37/279 (13%)
Frame = -3
Query: 727 FDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKA 548
F+++++ LCR+ D A ++ M + G P+ + LI A R+L+
Sbjct: 254 FNIVIKGLCRIGEVDRAFEIFDDMGSFGCCPDVVTYNTLINGLCRASDVDRGHRLLMEI- 312
Query: 547 ELCNQRGETFSPSVCN---------KFLSLLISRNRFDE--------------------- 458
Q FS V K + + N +DE
Sbjct: 313 ----QSNSKFSLDVVTYTSLIKGYCKLGKMEEASNLYDEMVRSGTEPNVITYNTLIDGFS 368
Query: 457 -------AVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPD 299
A+V++ +L+ PD +F +++ C SG+++E +L++ M++ + P+
Sbjct: 369 KIGEVGSAMVMYEKLLLQG--CFPDVVTFTSLIDAHCRSGQIDEGIKLWHEMQTRNISPN 426
Query: 298 IVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLF 119
T++ LIN LC+ ++ A LLR+++ ++ P Y VI G+CK+G +++A +
Sbjct: 427 AHTFHVLINSLCKENRLNEARGLLRQLKW-TDIVPQAFVYNPVIDGFCKAGNIDEANAIV 485
Query: 118 DEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMV 2
EM + + +T+ ++I G G++ A+ ++ KM+
Sbjct: 486 AEMEEKRCKLDTYTFTILIIGHCMKGKMHEAINIFHKML 524
>ref|XP_010656116.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Vitis vinifera] gi|731406320|ref|XP_010656117.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Vitis vinifera]
Length = 571
Score = 297 bits (761), Expect = 1e-93
Identities = 157/313 (50%), Positives = 208/313 (66%), Gaps = 1/313 (0%)
Frame = -3
Query: 937 WFIKVVCTLCIR-HSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFFRYTR 761
W +KV+CTLC+R HS + DYF + L P +A+ V+ LNNP LA FF+ +R
Sbjct: 76 WIVKVICTLCVRTHSLDACL---DYFSKTLTPSIAFEVVRG----LNNPELALKFFQLSR 128
Query: 760 LSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKF 581
++LNL HS + LLRSL M H+SAK VY M DG P+ ++L FL++S +A KF
Sbjct: 129 VNLNLCHSFRTYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKF 188
Query: 580 RIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSRSFAPDN 401
IA + G FS V NK L+ L+ N+ DEAV FR M F D+
Sbjct: 189 NIARTWV---------DGVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPF--DS 237
Query: 400 CSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLRE 221
CSFN ++RGLC GKV++AFELFN MR F C PD++TYNTLING CRV VDR H+LL+E
Sbjct: 238 CSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKE 297
Query: 220 IQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIG 41
+ ++ SP+VVTYTS+ISGYCK GKME A+ LF+ MI+ GI+PN FT+N++I+GFGK+G
Sbjct: 298 LLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVG 357
Query: 40 EVASALKMYEKMV 2
++ SA MYE+M+
Sbjct: 358 DMVSAENMYEEML 370
Score = 86.3 bits (212), Expect = 3e-15
Identities = 57/237 (24%), Positives = 108/237 (45%), Gaps = 1/237 (0%)
Frame = -3
Query: 718 LLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKAEL- 542
++ C++ + A ++++ M + GI PN + LI F AE + L
Sbjct: 314 IISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLG 373
Query: 541 CNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMS 362
C TF+ + + + R+ L H L +R+ +P+ +F + LC
Sbjct: 374 CPPDIITFTSLIDGHCRTGKVERS-------LKLWHELNARNLSPNEYTFAILTNALCKE 426
Query: 361 GKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVT 182
++ EA ++ + YN +I+G C+ GNVD A+ +L E++ P+ +T
Sbjct: 427 NRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEME-EKRCKPDKIT 485
Query: 181 YTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYE 11
YT +I G+C G++ +A ++F+ M+ G P+ T +I K G A ++ +
Sbjct: 486 YTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQ 542
Score = 84.7 bits (208), Expect = 1e-14
Identities = 74/311 (23%), Positives = 141/311 (45%), Gaps = 34/311 (10%)
Frame = -3
Query: 832 VVINHITHRL---NNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYH 662
VV N + ++L N + A FFR ++ L+ +F++L+R LCR+ D A +++
Sbjct: 203 VVYNKLLNQLVRGNQVDEAVCFFR-EQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFN 261
Query: 661 YMEADGILPNNALLDFLIASFANARKFRIAERIL---IAKAEL--------------CNQ 533
M G P+ + LI F + +L ++K +L C
Sbjct: 262 EMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKL 321
Query: 532 RGETFSPSVCNKFLSLLISRNRFDEAVVLFR----GHMLKSRSF---------APDNCSF 392
+ + N +S I N F +++ G M+ + + PD +F
Sbjct: 322 GKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITF 381
Query: 391 NTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLREIQ- 215
+++ G C +GKVE + +L++ + + + P+ T+ L N LC+ + A LR+++
Sbjct: 382 TSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKW 441
Query: 214 LHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEV 35
H P Y VI G+CK+G +++A + EM +P+ TY ++I G G +
Sbjct: 442 RHIVAQP--FMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRL 499
Query: 34 ASALKMYEKMV 2
+ A+ ++ +M+
Sbjct: 500 SEAISIFNRML 510
>ref|XP_012089183.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Jatropha curcas] gi|643708689|gb|KDP23605.1|
hypothetical protein JCGZ_23438 [Jatropha curcas]
Length = 545
Score = 295 bits (755), Expect = 5e-93
Identities = 159/312 (50%), Positives = 214/312 (68%)
Frame = -3
Query: 937 WFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFFRYTRL 758
WF+KVV TL +R Y L P +A+ VI R NNP + +F ++RL
Sbjct: 46 WFVKVVATLFVRSHCLDACLG--YLCGKLTPLIAFEVIK----RFNNPKVGLNFLEFSRL 99
Query: 757 SLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKFR 578
+L++ HS S + LL+RSLC+M HD K+V+ +M++DG LP++ LL FL+ SF A KF
Sbjct: 100 NLSVTHSFSTYSLLMRSLCQMGFHDLVKVVFDHMKSDGYLPDSTLLRFLLTSFVQAGKFN 159
Query: 577 IAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSRSFAPDNC 398
+A+++L AE+ +Q S V N L+ L+ RN+ EA+ LF H L S S A D
Sbjct: 160 LAKKLL---AEIQSQEVR-ISSFVYNNLLNELVRRNQVHEALCLFEEH-LASHSPA-DTW 213
Query: 397 SFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLREI 218
+FN ++RGLC G+V+ AFE FN M SF CLPDIVTYNTLINGLCRV +DR H+LL+E+
Sbjct: 214 TFNILIRGLCRVGEVDRAFEFFNDMESFGCLPDIVTYNTLINGLCRVNELDRGHKLLKEV 273
Query: 217 QLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGE 38
Q ++ SP+VVTYTSVISG+CK GKME+A+ LFDEMI GI+PN+FT+NV+IDGFGKIG+
Sbjct: 274 QSRNDCSPDVVTYTSVISGFCKPGKMEEASVLFDEMIRSGIKPNVFTFNVLIDGFGKIGD 333
Query: 37 VASALKMYEKMV 2
+ +A + EKMV
Sbjct: 334 MDAAEAVREKMV 345
Score = 99.8 bits (247), Expect = 9e-20
Identities = 68/227 (29%), Positives = 111/227 (48%)
Frame = -3
Query: 727 FDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKA 548
F++L+R LCR+ D A ++ ME+ G LP+ + LI +
Sbjct: 215 FNILIRGLCRVGEVDRAFEFFNDMESFGCLPDIVTYNTLINGLCRVNEL----------- 263
Query: 547 ELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLC 368
RG +K L + SRN +PD ++ +V+ G C
Sbjct: 264 ----DRG--------HKLLKEVQSRN-----------------DCSPDVVTYTSVISGFC 294
Query: 367 MSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNV 188
GK+EEA LF+ M P++ T+N LI+G ++G++D A E +RE + P+V
Sbjct: 295 KPGKMEEASVLFDEMIRSGIKPNVFTFNVLIDGFGKIGDMDAA-EAVREKMVSFGCLPDV 353
Query: 187 VTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGK 47
VT+TS+I GYC+SG++ ++D M G+ PN++TY ++I+ K
Sbjct: 354 VTFTSLIDGYCRSGQVYLGLKIWDAMKAMGVPPNVYTYAILINALCK 400
Score = 84.0 bits (206), Expect = 2e-14
Identities = 69/320 (21%), Positives = 138/320 (43%), Gaps = 5/320 (1%)
Frame = -3
Query: 955 SPASTLWFIKVVCTLCI--RHSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNNPNLAF 782
SPA T F ++ LC ++F FN L V Y + + R+N +
Sbjct: 208 SPADTWTFNILIRGLCRVGEVDRAFEFFNDMESFGCLPDIVTYNTLINGLCRVNELDRGH 267
Query: 781 SFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIAS 602
+ + + + ++ C+ + A +++ M GI PN + LI
Sbjct: 268 KLLKEVQSRNDCSPDVVTYTSVISGFCKPGKMEEASVLFDEMIRSGIKPNVFTFNVLIDG 327
Query: 601 FANARKFRIAERILIAKAELCNQRGETFS--PSVCNKFLSLLISRNRFDEAVVLFR-GHM 431
F AE + ++ +F P V F SL+ R + + +
Sbjct: 328 FGKIGDMDAAEAV--------REKMVSFGCLPDVVT-FTSLIDGYCRSGQVYLGLKIWDA 378
Query: 430 LKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGN 251
+K+ P+ ++ ++ LC ++ EA + ++ + +P YN +I+G C+ GN
Sbjct: 379 MKAMGVPPNVYTYAILINALCKENRLHEARDFLRQLKFSNVVPKPFVYNPVIDGFCKAGN 438
Query: 250 VDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYN 71
VD A+ ++ E++ +P+ +T+ +I G+C G+M +A ++F +M+ G P+ T N
Sbjct: 439 VDEANLIVMEME-EKRCNPDKITFNILIIGHCMKGRMNEAIDIFSKMVAIGCAPDSITIN 497
Query: 70 VIIDGFGKIGEVASALKMYE 11
++ K G + A ++ +
Sbjct: 498 SLVSCLLKAGMPSVAFRIMQ 517
>ref|XP_015889017.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Ziziphus jujuba]
Length = 595
Score = 294 bits (753), Expect = 4e-92
Identities = 157/316 (49%), Positives = 215/316 (68%), Gaps = 1/316 (0%)
Frame = -3
Query: 946 STLWFIKVVCTLCIR-HSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFFR 770
S WF+KVV TL IR HS + Y ++L P +A+ VI RLNNP+L FF
Sbjct: 93 SETWFLKVVYTLFIRSHSLDSCL---GYLHKNLTPSIAFEVIK----RLNNPSLGLKFFE 145
Query: 769 YTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANA 590
+TR++L++ H ++ L+RSLC+M LH SAKLV+ M +DG P++++++FL+ S+A
Sbjct: 146 FTRMNLSINHKFRTYNFLMRSLCQMGLHGSAKLVFDCMRSDGHSPDDSIIEFLVVSYAQI 205
Query: 589 RKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSRSFA 410
K IA ++L E + + V N LS+L+ RN+ DEAV LFR + + F
Sbjct: 206 GKLDIAVKML----EEVHCDAVKVAVVVYNSLLSVLVRRNQVDEAVSLFRKFV--ASHFR 259
Query: 409 PDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHEL 230
PDN + NT+++GLC G+V++AFE FN M SF C PD+VTYNTLINGLCR VD+ L
Sbjct: 260 PDNWTCNTLVKGLCGVGEVDKAFEFFNDMGSFGCSPDVVTYNTLINGLCRTNEVDKGCRL 319
Query: 229 LREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFG 50
L+E+QL E SPNV+T+TSVISGYCK G+M++A+ LFDEM + G++PN T+N +IDGFG
Sbjct: 320 LKEVQLRRELSPNVITFTSVISGYCKLGRMDEASILFDEMCSSGVKPNDVTFNALIDGFG 379
Query: 49 KIGEVASALKMYEKMV 2
K GE+ASAL MYEKMV
Sbjct: 380 KAGELASALAMYEKMV 395
Score = 95.1 bits (235), Expect = 4e-18
Identities = 67/260 (25%), Positives = 121/260 (46%), Gaps = 4/260 (1%)
Frame = -3
Query: 808 RLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNN 629
R N + + +L L + F ++ C++ D A +++ M + G+ PN+
Sbjct: 309 RTNEVDKGCRLLKEVQLRRELSPNVITFTSVISGYCKLGRMDEASILFDEMCSSGVKPND 368
Query: 628 ALLDFLIASFANARKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVV 449
+ LI F A + A +A E G + P V F SL+ N + A
Sbjct: 369 VTFNALIDGFGKAGELASA----LAMYEKMVSHG--YQPDVVT-FTSLI---NGYCRAGQ 418
Query: 448 LFRG----HMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNT 281
L G H + ++ P+ +FN ++ LC +++EA + ++ + +P YN
Sbjct: 419 LSHGLNLWHEMNAKKIFPNGYTFNVLIHALCKDNRLDEARDFLRQLKWSNIVPKPFMYNP 478
Query: 280 LINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINC 101
+I+G C+ GNVD A+ ++ E++ P+ T+T +I G C G+M +A +LF +M+
Sbjct: 479 VIDGFCKAGNVDEANIIVAEME-EKGCRPDKCTFTILILGNCMKGRMFEAIDLFKKMLAV 537
Query: 100 GIRPNLFTYNVIIDGFGKIG 41
G P+ T + +I K G
Sbjct: 538 GCAPDYITVSCLISCLLKAG 557
Score = 60.8 bits (146), Expect = 9e-07
Identities = 41/166 (24%), Positives = 68/166 (40%)
Frame = -3
Query: 727 FDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKA 548
F L+ CR ++H M A I PN + LI + + A L
Sbjct: 406 FTSLINGYCRAGQLSHGLNLWHEMNAKKIFPNGYTFNVLIHALCKDNRLDEARDFL---- 461
Query: 547 ELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLC 368
P + N + DEA ++ ++ + PD C+F ++ G C
Sbjct: 462 RQLKWSNIVPKPFMYNPVIDGFCKAGNVDEANIIVAE--MEEKGCRPDKCTFTILILGNC 519
Query: 367 MSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHEL 230
M G++ EA +LF M + C PD +T + LI+ L + G + A+ +
Sbjct: 520 MKGRMFEAIDLFKKMLAVGCAPDYITVSCLISCLLKAGMPNEAYHI 565
>ref|XP_009359734.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Pyrus x bretschneideri]
Length = 547
Score = 290 bits (741), Expect = 7e-91
Identities = 157/313 (50%), Positives = 210/313 (67%), Gaps = 1/313 (0%)
Frame = -3
Query: 937 WFIKVVCTLCIR-HSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFFRYTR 761
WF+KVVCTL +R HS V Y ++L P A+ VI RLNNP L FF +R
Sbjct: 49 WFVKVVCTLFLRSHSLDLV-----YLSKNLSPSTAFEVIK----RLNNPILGLKFFELSR 99
Query: 760 LSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKF 581
+SL++ HS ++ LLRSLC+M L DSAKLV+ YM +DG P+++ ++ L++S+A K
Sbjct: 100 VSLSVNHSVWTYNFLLRSLCQMGLQDSAKLVFDYMRSDGHTPDDSAVELLVSSYAQMGKL 159
Query: 580 RIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSRSFAPDN 401
AE+ L C++ T P V N ++L+ +N+ DEAV LFR HM PD+
Sbjct: 160 DNAEKFL--DEVHCDEIRLT--PFVYNNLFNVLVQQNKADEAVYLFRKHMWSH--CRPDS 213
Query: 400 CSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLRE 221
+FN ++RGLC G+V++AFELF+ M SF C PDIVTYNTLI GLCR VDR +LL+E
Sbjct: 214 WTFNILIRGLCRVGEVDKAFELFSDMGSFGCYPDIVTYNTLITGLCRTNKVDRGCQLLKE 273
Query: 220 IQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIG 41
+Q E SP+V+T+TSVISGYCK GKME+A+ LFDEMIN G+RP T+N +IDGFGK G
Sbjct: 274 VQSRIELSPDVITFTSVISGYCKLGKMEEASVLFDEMINAGVRPTSVTFNAMIDGFGKTG 333
Query: 40 EVASALKMYEKMV 2
+ SAL M++KM+
Sbjct: 334 NMGSALAMHQKML 346
Score = 80.5 bits (197), Expect = 3e-13
Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 1/257 (0%)
Frame = -3
Query: 808 RLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNN 629
R N + + + + L F ++ C++ + A +++ M G+ P +
Sbjct: 260 RTNKVDRGCQLLKEVQSRIELSPDVITFTSVISGYCKLGKMEEASVLFDEMINAGVRPTS 319
Query: 628 ALLDFLIASFANARKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDE-AV 452
+ +I F A + K R + F+ F SL+ R + +
Sbjct: 320 VTFNAMIDGFGKTGNMGSA-LAMHQKMLFHGYRSDVFT------FTSLIDGHCRAGQLSQ 372
Query: 451 VLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLIN 272
L + ++ +P +F+ ++ LC ++ EA + ++ + +P YN +I+
Sbjct: 373 GLKLWQEMNGKNVSPSAYTFSVLINALCKESRLHEARDFLRQLKWSNVVPKPFIYNPVID 432
Query: 271 GLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIR 92
G C+ GNVD A+ ++ E++ SP+ VT+T +I G C G+M +A + F +M+ G
Sbjct: 433 GFCKAGNVDEANAIVAEME-EKRCSPDKVTFTILILGNCMKGRMSEAISNFKKMLAIGCA 491
Query: 91 PNLFTYNVIIDGFGKIG 41
P+ T N + K G
Sbjct: 492 PDNITVNALTSCLMKAG 508
Score = 75.1 bits (183), Expect = 2e-11
Identities = 64/277 (23%), Positives = 116/277 (41%), Gaps = 35/277 (12%)
Frame = -3
Query: 727 FDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKA 548
F++L+R LCR+ D A ++ M + G P+ + LI K ++L
Sbjct: 216 FNILIRGLCRVGEVDKAFELFSDMGSFGCYPDIVTYNTLITGLCRTNKVDRGCQLLKEV- 274
Query: 547 ELCNQRGETFSPSVCN--KFLSLLISRNRFDEAVVLF----------------------- 443
Q SP V +S + +EA VLF
Sbjct: 275 ----QSRIELSPDVITFTSVISGYCKLGKMEEASVLFDEMINAGVRPTSVTFNAMIDGFG 330
Query: 442 -RGHM---------LKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIV 293
G+M + + D +F +++ G C +G++ + +L+ M + P
Sbjct: 331 KTGNMGSALAMHQKMLFHGYRSDVFTFTSLIDGHCRAGQLSQGLKLWQEMNGKNVSPSAY 390
Query: 292 TYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDE 113
T++ LIN LC+ + A + LR+++ S P Y VI G+CK+G +++A + E
Sbjct: 391 TFSVLINALCKESRLHEARDFLRQLKW-SNVVPKPFIYNPVIDGFCKAGNVDEANAIVAE 449
Query: 112 MINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMV 2
M P+ T+ ++I G G ++ A+ ++KM+
Sbjct: 450 MEEKRCSPDKVTFTILILGNCMKGRMSEAISNFKKML 486
>ref|XP_008388776.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Malus domestica]
Length = 593
Score = 291 bits (744), Expect = 8e-91
Identities = 154/314 (49%), Positives = 210/314 (66%), Gaps = 1/314 (0%)
Frame = -3
Query: 940 LWFIKVVCTLCIR-HSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFFRYT 764
+WF+KVVCTL +R HS + Y ++L P +A+ VI RLNNP L FF +
Sbjct: 94 VWFVKVVCTLFLRSHS-----LDLGYLSKNLSPSIAFEVIK----RLNNPKLGLKFFELS 144
Query: 763 RLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARK 584
R+SL++ HS ++ LLRSLC+M L DSAKLV+ YM +DG P++++++ L++S+A K
Sbjct: 145 RVSLSVKHSVWTYNFLLRSLCQMGLQDSAKLVFDYMRSDGHTPDDSVVELLVSSYAQMGK 204
Query: 583 FRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSRSFAPD 404
AE+ L C + P V N ++L+ +N+ DEAV LFR HM PD
Sbjct: 205 LDDAEKFL--NEAHCGEI--RLPPFVYNNLFNVLVXQNKVDEAVCLFRKHM--GSHXXPD 258
Query: 403 NCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLR 224
N +FN ++RGLC G++++AFELF+ M S C PDIVTYNTLI+GLCR VDR +LL+
Sbjct: 259 NWTFNILIRGLCRVGEIDKAFELFSDMGSSGCYPDIVTYNTLISGLCRANEVDRGFQLLK 318
Query: 223 EIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKI 44
E+Q E SP+V+T+TSVISGYCK GKME+A LFDEMIN G+RP T+N +IDGFGK
Sbjct: 319 EVQSRIELSPDVITFTSVISGYCKLGKMEEAXVLFDEMINAGVRPTSVTFNAMIDGFGKT 378
Query: 43 GEVASALKMYEKMV 2
G + SAL M++KM+
Sbjct: 379 GNMGSALAMHQKML 392
Score = 86.3 bits (212), Expect = 4e-15
Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 6/289 (2%)
Frame = -3
Query: 853 LDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAK 674
L PFV + N + + N + A FR + + F++L+R LCR+ D A
Sbjct: 222 LPPFVYNNLFNVLVXQ-NKVDEAVCLFR-KHMGSHXXPDNWTFNILIRGLCRVGEIDKAF 279
Query: 673 LVYHYMEADGILPNNALLDFLIASFANA----RKFRIAERILIAKAELCNQRGETFSPSV 506
++ M + G P+ + LI+ A R F++ + + ++ EL SP V
Sbjct: 280 ELFSDMGSSGCYPDIVTYNTLISGLCRANEVDRGFQLLKEVQ-SRIEL--------SPDV 330
Query: 505 CN--KFLSLLISRNRFDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELF 332
+S + +EA VLF + + P + +FN ++ G +G + A +
Sbjct: 331 ITFTSVISGYCKLGKMEEAXVLF--DEMINAGVRPTSVTFNAMIDGFGKTGNMGSALAMH 388
Query: 331 NVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCK 152
M D+ T+ +LI+G CR G + + +L +E+ SP+ T++ +I+ CK
Sbjct: 389 QKMLFHGYHSDVFTFTSLIDGHCRAGKLSQGLKLWQEMN-GKNVSPSAYTFSVLINALCK 447
Query: 151 SGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKM 5
++ +A + ++ + P F YN +IDGF K G V A + +M
Sbjct: 448 ESRLHEARDFLRQLKWSNVVPKPFIYNPVIDGFCKAGNVDEANAIVAEM 496
Score = 80.9 bits (198), Expect = 2e-13
Identities = 57/259 (22%), Positives = 114/259 (44%), Gaps = 3/259 (1%)
Frame = -3
Query: 808 RLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNN 629
R N + F + + + L F ++ C++ + A +++ M G+ P +
Sbjct: 306 RANEVDRGFQLLKEVQSRIELSPDVITFTSVISGYCKLGKMEEAXVLFDEMINAGVRPTS 365
Query: 628 ALLDFLIASFANARKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNR---FDE 458
+ +I F A + K + F+ F SL+ R +
Sbjct: 366 VTFNAMIDGFGKTGNMGSA-LAMHQKMLFHGYHSDVFT------FTSLIDGHCRAGKLSQ 418
Query: 457 AVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTL 278
+ L++ + ++ +P +F+ ++ LC ++ EA + ++ + +P YN +
Sbjct: 419 GLKLWQE--MNGKNVSPSAYTFSVLINALCKESRLHEARDFLRQLKWSNVVPKPFIYNPV 476
Query: 277 INGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCG 98
I+G C+ GNVD A+ ++ E++ SP+ VT+T +I G C G+M +A + F +M+ G
Sbjct: 477 IDGFCKAGNVDEANAIVAEME-EKRCSPDKVTFTILILGNCMKGRMSEAISNFKKMLAIG 535
Query: 97 IRPNLFTYNVIIDGFGKIG 41
P+ T N + K G
Sbjct: 536 CAPDSITVNSLTSCLMKAG 554
>ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508782996|gb|EOY30252.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 592
Score = 290 bits (741), Expect = 2e-90
Identities = 149/319 (46%), Positives = 213/319 (66%)
Frame = -3
Query: 961 KASPASTLWFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNNPNLAF 782
KA WF+KVVCTL + +SQ Y ++L P + + V+ LNNP L
Sbjct: 83 KAIQKHEAWFVKVVCTLFV-YSQPLDDSCLSYLSKNLTPLIEFEVVKW----LNNPALGL 137
Query: 781 SFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIAS 602
F ++R++ N+ HS ++LL+RS C M LHDSAKLV+ YM DG LP+ +L F+I+S
Sbjct: 138 KFLEFSRVNFNIAHSFWTYNLLMRSFCHMGLHDSAKLVFDYMRIDGHLPDTTILGFMISS 197
Query: 601 FANARKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKS 422
F A +F +A+++L A++ + S N L++++ +N+ +EAV L++ ++
Sbjct: 198 FGRAGEFGMAKKLL---ADVQSDE-VVISIFALNNLLNMMVKQNKLEEAVSLYKENL--G 251
Query: 421 RSFAPDNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDR 242
+F PD +FN ++RGLC GKV++AFELFN M SF C PDIVTYNT+INGLC+V VDR
Sbjct: 252 SNFYPDAWTFNILIRGLCRVGKVDQAFELFNDMGSFGCFPDIVTYNTIINGLCKVNEVDR 311
Query: 241 AHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVII 62
H+LL ++Q + SP+VVTYTSVISGYCK GKM++A+ LF EMI+ G P + T+NV+I
Sbjct: 312 GHKLLNQVQSRDDCSPDVVTYTSVISGYCKLGKMDEASALFHEMISSGTVPTVVTFNVLI 371
Query: 61 DGFGKIGEVASALKMYEKM 5
DGFGK+G++ SA MYE+M
Sbjct: 372 DGFGKVGDMVSAKSMYEQM 390
Score = 104 bits (260), Expect = 2e-21
Identities = 69/247 (27%), Positives = 121/247 (48%), Gaps = 2/247 (0%)
Frame = -3
Query: 760 LSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKF 581
L N F++L+R LCR+ D A +++ M + G P+ + +I +
Sbjct: 250 LGSNFYPDAWTFNILIRGLCRVGKVDQAFELFNDMGSFGCFPDIVTYNTIINGLCKVNEV 309
Query: 580 RIAERIL--IAKAELCNQRGETFSPSVCNKFLSLLISRNRFDEAVVLFRGHMLKSRSFAP 407
++L + + C+ T++ SV + + L + DEA LF H + S P
Sbjct: 310 DRGHKLLNQVQSRDDCSPDVVTYT-SVISGYCKL----GKMDEASALF--HEMISSGTVP 362
Query: 406 DNCSFNTVMRGLCMSGKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELL 227
+FN ++ G G + A ++ M SF C+ D+VT+ +LI+G CR+G+V+++ +L
Sbjct: 363 TVVTFNVLIDGFGKVGDMVSAKSMYEQMASFGCIADVVTFTSLIDGYCRIGDVNQSLQLW 422
Query: 226 REIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGK 47
++ + SPNV T+ I+ CK ++ +A E+ I P F +N +IDGF K
Sbjct: 423 NTMK-GRDLSPNVYTFAITINALCKENRLHEARGFLRELQCRNIVPKPFIFNPVIDGFCK 481
Query: 46 IGEVASA 26
G + A
Sbjct: 482 AGNLDEA 488
Score = 84.0 bits (206), Expect = 2e-14
Identities = 55/235 (23%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Frame = -3
Query: 718 LLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANARKFRIAERILIAKAELC 539
++ C++ D A ++H M + G +P + LI F +++ +
Sbjct: 335 VISGYCKLGKMDEASALFHEMISSGTVPTVVTFNVLIDGFGKVGD-------MVSAKSMY 387
Query: 538 NQRGETFSPSVCNKFLSLLISRNRF-DEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMS 362
Q + F SL+ R D L + +K R +P+ +F + LC
Sbjct: 388 EQMASFGCIADVVTFTSLIDGYCRIGDVNQSLQLWNTMKGRDLSPNVYTFAITINALCKE 447
Query: 361 GKVEEAFELFNVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVT 182
++ EA ++ + +P +N +I+G C+ GN+D A+ ++ E++ + P+ VT
Sbjct: 448 NRLHEARGFLRELQCRNIVPKPFIFNPVIDGFCKAGNLDEANLIVAEME-EKQCHPDKVT 506
Query: 181 YTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKM 17
+T +I G+C G+M +A ++F++M++ G P+ T N +I K G + A ++
Sbjct: 507 FTILIIGHCMKGRMFEAISIFNKMLSVGCTPDDVTVNSLISCLLKAGMPSEASRI 561