BLASTX nr result
ID: Rehmannia27_contig00020206
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00020206
(775 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002888381.1| expressed protein [Arabidopsis lyrata subsp.... 61 4e-09
gb|ADK66930.1| PetD [Paeonia delavayi] gi|301312531|gb|ADK66932.... 54 2e-06
gb|EMS62068.1| DNA-directed RNA polymerase subunit alpha [Tritic... 46 2e-06
gb|AEM55553.1| cytochrome b6-f complex subunit IV [Astrocaryum m... 54 7e-06
gb|AKF00669.1| cytochrome b6/f complex subunit IV (chloroplast) ... 55 8e-06
gb|AKF00530.1| cytochrome b6/f complex subunit IV (chloroplast) ... 55 8e-06
gb|AKF00273.1| cytochrome b6/f complex subunit IV (chloroplast) ... 55 8e-06
>ref|XP_002888381.1| expressed protein [Arabidopsis lyrata subsp. lyrata]
gi|297334222|gb|EFH64640.1| expressed protein
[Arabidopsis lyrata subsp. lyrata]
Length = 50
Score = 60.8 bits (146), Expect = 4e-09
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +1
Query: 601 GFDHRKDSLQANQPIFCIGVTRWLEQRHIWL 693
G+DHRKDSL+ NQPI C+G+T+WLEQRHIWL
Sbjct: 20 GYDHRKDSLKVNQPIPCMGLTQWLEQRHIWL 50
>gb|ADK66930.1| PetD [Paeonia delavayi] gi|301312531|gb|ADK66932.1| PetD [Paeonia
ludlowii] gi|301312534|gb|ADK66934.1| PetD [Paeonia
yananensis] gi|301312537|gb|ADK66936.1| PetD [Paeonia
jishanensis] gi|301312540|gb|ADK66938.1| PetD [Paeonia
rockii] gi|301312543|gb|ADK66940.1| PetD [Paeonia
rockii] gi|301312546|gb|ADK66942.1| PetD [Paeonia
rockii] gi|301312549|gb|ADK66944.1| PetD [Paeonia
rockii] gi|301312552|gb|ADK66946.1| PetD [Paeonia
rockii] gi|346722362|gb|AEO50864.1| PetD, partial
(chloroplast) [Paeonia delavayi]
gi|346722365|gb|AEO50866.1| PetD, partial (chloroplast)
[Paeonia ludlowii] gi|346722367|gb|AEO50867.1| PetD,
partial (chloroplast) [Paeonia rockii]
gi|346722370|gb|AEO50869.1| PetD, partial (chloroplast)
[Paeonia rockii] gi|346722373|gb|AEO50871.1| PetD,
partial (chloroplast) [Paeonia rockii]
gi|346722376|gb|AEO50873.1| PetD, partial (chloroplast)
[Paeonia rockii] gi|346722379|gb|AEO50875.1| PetD,
partial (chloroplast) [Paeonia rockii]
gi|346722382|gb|AEO50877.1| PetD, partial (chloroplast)
[Paeonia rockii] gi|346722385|gb|AEO50879.1| PetD,
partial (chloroplast) [Paeonia rockii]
gi|346722388|gb|AEO50881.1| PetD, partial (chloroplast)
[Paeonia rockii] gi|346722391|gb|AEO50883.1| PetD,
partial (chloroplast) [Paeonia rockii]
gi|346722394|gb|AEO50885.1| PetD, partial (chloroplast)
[Paeonia rockii] gi|346722397|gb|AEO50887.1| PetD,
partial (chloroplast) [Paeonia rockii]
gi|346722400|gb|AEO50889.1| PetD, partial (chloroplast)
[Paeonia rockii] gi|346722403|gb|AEO50891.1| PetD,
partial (chloroplast) [Paeonia rockii]
gi|346722406|gb|AEO50893.1| PetD, partial (chloroplast)
[Paeonia rockii] gi|346722409|gb|AEO50895.1| PetD,
partial (chloroplast) [Paeonia rockii]
gi|346722412|gb|AEO50897.1| PetD, partial (chloroplast)
[Paeonia rockii] gi|346722415|gb|AEO50899.1| PetD,
partial (chloroplast) [Paeonia rockii]
gi|346722418|gb|AEO50901.1| PetD, partial (chloroplast)
[Paeonia rockii] gi|346722421|gb|AEO50903.1| PetD,
partial (chloroplast) [Paeonia rockii]
gi|346722424|gb|AEO50905.1| PetD, partial (chloroplast)
[Paeonia rockii] gi|346722427|gb|AEO50907.1| PetD,
partial (chloroplast) [Paeonia rockii]
gi|346722430|gb|AEO50909.1| PetD, partial (chloroplast)
[Paeonia rockii] gi|346722433|gb|AEO50911.1| PetD,
partial (chloroplast) [Paeonia rockii]
Length = 64
Score = 53.9 bits (128), Expect = 2e-06
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -1
Query: 73 MSGSFGGWIYTNSPIPITKKPDLN 2
MSGSFGGWIY NSPIPITKKPDLN
Sbjct: 1 MSGSFGGWIYKNSPIPITKKPDLN 24
>gb|EMS62068.1| DNA-directed RNA polymerase subunit alpha [Triticum urartu]
Length = 430
Score = 46.2 bits (108), Expect(2) = 2e-06
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +3
Query: 48 IHPPKEPDMRIFYHPARARLKRTK 119
IHPPKEPDMRI++HPARAR+K +
Sbjct: 339 IHPPKEPDMRIYHHPARARVKEIR 362
Score = 33.5 bits (75), Expect(2) = 2e-06
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 197 FPELQLSIA-KNLVISLNKYSIPKSAYKVDHDMIKCFLGRL 316
FP+L L + +N I + K SI K AYK DHD + C L +
Sbjct: 389 FPKLHLQLLIENNPILMGKCSISKWAYKFDHDQLLCGLSHV 429
>gb|AEM55553.1| cytochrome b6-f complex subunit IV [Astrocaryum murumuru]
Length = 122
Score = 53.9 bits (128), Expect = 7e-06
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -1
Query: 73 MSGSFGGWIYTNSPIPITKKPDLN 2
MSGSFGGWIY NSPIPITKKPDLN
Sbjct: 1 MSGSFGGWIYKNSPIPITKKPDLN 24
>gb|AKF00669.1| cytochrome b6/f complex subunit IV (chloroplast) [Reinhardtia
simplex] gi|816378307|gb|AKF00954.1| cytochrome b6/f
complex subunit IV (chloroplast) [Areca vestiaria]
Length = 189
Score = 55.1 bits (131), Expect = 8e-06
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -1
Query: 79 ILMSGSFGGWIYTNSPIPITKKPDLN 2
++MSGSFGGWIY NSPIPITKKPDLN
Sbjct: 1 MIMSGSFGGWIYKNSPIPITKKPDLN 26
>gb|AKF00530.1| cytochrome b6/f complex subunit IV (chloroplast) [Roystonea
regia]
Length = 189
Score = 55.1 bits (131), Expect = 8e-06
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -1
Query: 79 ILMSGSFGGWIYTNSPIPITKKPDLN 2
++MSGSFGGWIY NSPIPITKKPDLN
Sbjct: 1 MIMSGSFGGWIYKNSPIPITKKPDLN 26
>gb|AKF00273.1| cytochrome b6/f complex subunit IV (chloroplast) [Podococcus
barteri]
Length = 189
Score = 55.1 bits (131), Expect = 8e-06
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -1
Query: 79 ILMSGSFGGWIYTNSPIPITKKPDLN 2
++MSGSFGGWIY NSPIPITKKPDLN
Sbjct: 1 MIMSGSFGGWIYKNSPIPITKKPDLN 26