BLASTX nr result
ID: Rehmannia27_contig00020021
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00020021
(445 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_015888400.1| PREDICTED: sm-like protein LSM2 [Ziziphus ju... 60 3e-09
ref|XP_008372267.1| PREDICTED: U6 snRNA-associated Sm-like prote... 60 3e-09
ref|XP_004493646.1| PREDICTED: sm-like protein LSM2 [Cicer ariet... 60 3e-09
ref|XP_004294156.1| PREDICTED: sm-like protein LSM2 [Fragaria ve... 60 3e-09
ref|XP_007212296.1| hypothetical protein PRUPE_ppa013967mg [Prun... 60 3e-09
ref|XP_006384992.1| hypothetical protein POPTR_0004s22870g [Popu... 59 3e-09
gb|ABK93357.1| unknown [Populus trichocarpa] 59 3e-09
gb|KYP70676.1| U6 snRNA-associated Sm-like protein LSm2, partial... 60 4e-09
ref|XP_009759372.1| PREDICTED: U6 snRNA-associated Sm-like prote... 60 4e-09
ref|XP_009613566.1| PREDICTED: U6 snRNA-associated Sm-like prote... 60 4e-09
ref|XP_013449697.1| u6 snRNA-associated-like-Smprotein [Medicago... 60 4e-09
ref|XP_003625831.1| u6 snRNA-associated-like-Smprotein [Medicago... 60 4e-09
ref|NP_001236540.1| uncharacterized protein LOC100305778 [Glycin... 60 4e-09
emb|CDP03596.1| unnamed protein product [Coffea canephora] 60 6e-09
gb|KNA23137.1| hypothetical protein SOVF_027350 [Spinacia oleracea] 59 8e-09
ref|XP_008461281.1| PREDICTED: U6 snRNA-associated Sm-like prote... 59 8e-09
gb|EPS69310.1| hypothetical protein M569_05456 [Genlisea aurea] 59 8e-09
ref|XP_004135926.1| PREDICTED: sm-like protein LSM2 [Cucumis sat... 59 8e-09
ref|XP_002304049.1| small nuclear ribonucleoprotein D [Populus t... 59 8e-09
gb|ABK93861.1| unknown [Populus trichocarpa] 59 8e-09
>ref|XP_015888400.1| PREDICTED: sm-like protein LSM2 [Ziziphus jujuba]
Length = 93
Score = 60.1 bits (144), Expect = 3e-09
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVDVELLHDATRREARGG
Sbjct: 66 VVRYVQLPPEGVDVELLHDATRREARGG 93
>ref|XP_008372267.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Malus
domestica] gi|657981949|ref|XP_008383008.1| PREDICTED:
U6 snRNA-associated Sm-like protein LSm2 [Malus
domestica] gi|694327982|ref|XP_009354825.1| PREDICTED:
U6 snRNA-associated Sm-like protein LSm2 [Pyrus x
bretschneideri] gi|694434144|ref|XP_009344313.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm2
[Pyrus x bretschneideri]
gi|694442668|ref|XP_009347993.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2 [Pyrus x
bretschneideri]
Length = 93
Score = 60.1 bits (144), Expect = 3e-09
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVDVELLHDATRREARGG
Sbjct: 66 VVRYVQLPPEGVDVELLHDATRREARGG 93
>ref|XP_004493646.1| PREDICTED: sm-like protein LSM2 [Cicer arietinum]
gi|747066248|ref|XP_011079802.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2 [Sesamum indicum]
gi|828300186|ref|XP_012569299.1| PREDICTED: sm-like
protein LSM2 [Cicer arietinum]
gi|848850144|ref|XP_012832661.1| PREDICTED: sm-like
protein LSM2 [Erythranthe guttata]
gi|1012185648|ref|XP_015969371.1| PREDICTED: sm-like
protein LSM2 [Arachis duranensis]
gi|604348467|gb|EYU46622.1| hypothetical protein
MIMGU_mgv1a017110mg [Erythranthe guttata]
Length = 93
Score = 60.1 bits (144), Expect = 3e-09
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVDVELLHDATRREARGG
Sbjct: 66 VVRYVQLPPEGVDVELLHDATRREARGG 93
>ref|XP_004294156.1| PREDICTED: sm-like protein LSM2 [Fragaria vesca subsp. vesca]
Length = 93
Score = 60.1 bits (144), Expect = 3e-09
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVDVELLHDATRREARGG
Sbjct: 66 VVRYVQLPPEGVDVELLHDATRREARGG 93
>ref|XP_007212296.1| hypothetical protein PRUPE_ppa013967mg [Prunus persica]
gi|645239709|ref|XP_008226258.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2 [Prunus mume]
gi|462408161|gb|EMJ13495.1| hypothetical protein
PRUPE_ppa013967mg [Prunus persica]
Length = 93
Score = 60.1 bits (144), Expect = 3e-09
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVDVELLHDATRREARGG
Sbjct: 66 VVRYVQLPPEGVDVELLHDATRREARGG 93
>ref|XP_006384992.1| hypothetical protein POPTR_0004s22870g [Populus trichocarpa]
gi|550341760|gb|ERP62789.1| hypothetical protein
POPTR_0004s22870g [Populus trichocarpa]
Length = 52
Score = 58.9 bits (141), Expect = 3e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVDV+LLHDATRREARGG
Sbjct: 25 VVRYVQLPPEGVDVDLLHDATRREARGG 52
>gb|ABK93357.1| unknown [Populus trichocarpa]
Length = 54
Score = 58.9 bits (141), Expect = 3e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVDV+LLHDATRREARGG
Sbjct: 27 VVRYVQLPPEGVDVDLLHDATRREARGG 54
>gb|KYP70676.1| U6 snRNA-associated Sm-like protein LSm2, partial [Cajanus cajan]
Length = 92
Score = 59.7 bits (143), Expect = 4e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVD+ELLHDATRREARGG
Sbjct: 65 VVRYVQLPPEGVDIELLHDATRREARGG 92
>ref|XP_009759372.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Nicotiana
sylvestris]
Length = 93
Score = 59.7 bits (143), Expect = 4e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVD+ELLHDATRREARGG
Sbjct: 66 VVRYVQLPPEGVDIELLHDATRREARGG 93
>ref|XP_009613566.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Nicotiana
tomentosiformis] gi|697119234|ref|XP_009613567.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm2
[Nicotiana tomentosiformis]
Length = 93
Score = 59.7 bits (143), Expect = 4e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVD+ELLHDATRREARGG
Sbjct: 66 VVRYVQLPPEGVDIELLHDATRREARGG 93
>ref|XP_013449697.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
gi|657379345|gb|KEH23725.1| u6
snRNA-associated-like-Smprotein [Medicago truncatula]
Length = 93
Score = 59.7 bits (143), Expect = 4e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVD+ELLHDATRREARGG
Sbjct: 66 VVRYVQLPPEGVDIELLHDATRREARGG 93
>ref|XP_003625831.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
gi|355500846|gb|AES82049.1| u6
snRNA-associated-like-Smprotein [Medicago truncatula]
gi|388519597|gb|AFK47860.1| unknown [Lotus japonicus]
gi|728844373|gb|KHG23816.1| U6 snRNA-associated Sm-like
protein LSm2 [Gossypium arboreum]
Length = 93
Score = 59.7 bits (143), Expect = 4e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVD+ELLHDATRREARGG
Sbjct: 66 VVRYVQLPPEGVDIELLHDATRREARGG 93
>ref|NP_001236540.1| uncharacterized protein LOC100305778 [Glycine max]
gi|571445720|ref|XP_006576885.1| PREDICTED: sm-like
protein LSM2 [Glycine max] gi|255626583|gb|ACU13636.1|
unknown [Glycine max] gi|734372645|gb|KHN19868.1| U6
snRNA-associated Sm-like protein LSm2 [Glycine soja]
gi|734430148|gb|KHN45376.1| U6 snRNA-associated Sm-like
protein LSm2 [Glycine soja] gi|947045846|gb|KRG95475.1|
hypothetical protein GLYMA_19G153500 [Glycine max]
gi|947118908|gb|KRH67157.1| hypothetical protein
GLYMA_03G150900 [Glycine max]
Length = 93
Score = 59.7 bits (143), Expect = 4e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVD+ELLHDATRREARGG
Sbjct: 66 VVRYVQLPPEGVDIELLHDATRREARGG 93
>emb|CDP03596.1| unnamed protein product [Coffea canephora]
Length = 113
Score = 59.7 bits (143), Expect = 6e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVD+ELLHDATRREARGG
Sbjct: 86 VVRYVQLPPEGVDIELLHDATRREARGG 113
>gb|KNA23137.1| hypothetical protein SOVF_027350 [Spinacia oleracea]
Length = 93
Score = 58.9 bits (141), Expect = 8e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPP+GVDVELLHDATRREARGG
Sbjct: 66 VVRYVQLPPDGVDVELLHDATRREARGG 93
>ref|XP_008461281.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Cucumis melo]
Length = 93
Score = 58.9 bits (141), Expect = 8e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPP+GVDVELLHDATRREARGG
Sbjct: 66 VVRYVQLPPDGVDVELLHDATRREARGG 93
>gb|EPS69310.1| hypothetical protein M569_05456 [Genlisea aurea]
Length = 93
Score = 58.9 bits (141), Expect = 8e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPP+GVDVELLHDATRREARGG
Sbjct: 66 VVRYVQLPPDGVDVELLHDATRREARGG 93
>ref|XP_004135926.1| PREDICTED: sm-like protein LSM2 [Cucumis sativus]
gi|700189904|gb|KGN45137.1| hypothetical protein
Csa_7G428250 [Cucumis sativus]
Length = 93
Score = 58.9 bits (141), Expect = 8e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPP+GVDVELLHDATRREARGG
Sbjct: 66 VVRYVQLPPDGVDVELLHDATRREARGG 93
>ref|XP_002304049.1| small nuclear ribonucleoprotein D [Populus trichocarpa]
gi|743848741|ref|XP_011028302.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2 isoform X1
[Populus euphratica] gi|743848745|ref|XP_011028303.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm2
isoform X2 [Populus euphratica]
gi|743927394|ref|XP_011007870.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2 [Populus
euphratica] gi|118484877|gb|ABK94305.1| unknown [Populus
trichocarpa] gi|222841481|gb|EEE79028.1| small nuclear
ribonucleoprotein D [Populus trichocarpa]
Length = 93
Score = 58.9 bits (141), Expect = 8e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVDV+LLHDATRREARGG
Sbjct: 66 VVRYVQLPPEGVDVDLLHDATRREARGG 93
>gb|ABK93861.1| unknown [Populus trichocarpa]
Length = 93
Score = 58.9 bits (141), Expect = 8e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 445 VVRYVQLPPEGVDVELLHDATRREARGG 362
VVRYVQLPPEGVDV+LLHDATRREARGG
Sbjct: 66 VVRYVQLPPEGVDVDLLHDATRREARGG 93