BLASTX nr result

ID: Rehmannia27_contig00019935 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00019935
         (392 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011097141.1| PREDICTED: ATP-dependent Clp protease proteo...    90   4e-19
ref|XP_011099493.1| PREDICTED: ATP-dependent Clp protease proteo...    80   2e-15
ref|XP_012832588.1| PREDICTED: ATP-dependent Clp protease proteo...    69   3e-11

>ref|XP_011097141.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic-like [Sesamum indicum]
          Length = 323

 Score = 90.1 bits (222), Expect = 4e-19
 Identities = 53/93 (56%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
 Frame = +1

Query: 121 MERAILTAS---STHPGPAGAAAFHRHGAPIFSPSHNSFSQFFPISTISNRSDCQHTSSV 291
           ME  I T +   ST P PA AAAF R   PIFS  HN+F  FFPI+T S+    Q+ S  
Sbjct: 1   MESGIATFTGTLSTPPRPA-AAAFLRQNGPIFSQRHNNFRHFFPITTTSSSWVGQNASCG 59

Query: 292 RSKRNLSVKALKSHSLASEWDVSNYAAPSWLPR 390
           RSK +L VK+L +HSL+S+W+VSNYAAPSWLPR
Sbjct: 60  RSKGSLRVKSL-NHSLSSKWEVSNYAAPSWLPR 91


>ref|XP_011099493.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic [Sesamum indicum]
          Length = 330

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 52/93 (55%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
 Frame = +1

Query: 121 MERAILT---ASSTHPGPAGAAAFHRHGAPIFSPSHNSFSQFFPISTISNRSDCQHTSSV 291
           MER  LT   +SST P PA  A F  H APIF  SH+ F QFF + T    ++C   S  
Sbjct: 1   MERGCLTFTTSSSTPPRPA--AVFPCHRAPIFGQSHDKFQQFFRMRT----ANCGSISG- 53

Query: 292 RSKRNLSVKALKSHSLASEWDVSNYAAPSWLPR 390
            SK +LSVKAL + SL+S WDVSNYAAPSWLPR
Sbjct: 54  -SKGSLSVKAL-NQSLSSNWDVSNYAAPSWLPR 84


>ref|XP_012832588.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic [Erythranthe guttata]
           gi|604342255|gb|EYU41319.1| hypothetical protein
           MIMGU_mgv1a010129mg [Erythranthe guttata]
          Length = 321

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 46/93 (49%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
 Frame = +1

Query: 121 MERAILT---ASSTHPGPAGAAAFHRHGAPIFSPSHNSFSQFFPISTISNRSDCQHTSSV 291
           ME  ILT   +SS HP     AA  R  A IF+P  +SF QF   S ISN        S 
Sbjct: 1   MEGGILTFTASSSAHP-----AALLRRSATIFTPPRDSFRQFSTTSKISNGK-----KSS 50

Query: 292 RSKRNLSVKALKSHSLASEWDVSNYAAPSWLPR 390
           R   N SVKA  ++SL+S W+VSNYAAP+WLPR
Sbjct: 51  RKIGNFSVKA-SNNSLSSNWEVSNYAAPAWLPR 82


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