BLASTX nr result
ID: Rehmannia27_contig00019916
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00019916
(760 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011092289.1| PREDICTED: regulator of nonsense transcripts... 305 2e-98
gb|EYU33279.1| hypothetical protein MIMGU_mgv1a009229mg [Erythra... 267 1e-85
ref|XP_012842321.1| PREDICTED: regulator of nonsense transcripts... 267 9e-84
ref|XP_011088114.1| PREDICTED: regulator of nonsense transcripts... 249 8e-77
ref|XP_012850387.1| PREDICTED: regulator of nonsense transcripts... 241 3e-73
ref|XP_012850385.1| PREDICTED: regulator of nonsense transcripts... 241 3e-73
emb|CDO97628.1| unnamed protein product [Coffea canephora] 219 4e-65
ref|XP_009587503.1| PREDICTED: regulator of nonsense transcripts... 208 6e-61
ref|XP_009587502.1| PREDICTED: regulator of nonsense transcripts... 208 7e-61
ref|XP_015579218.1| PREDICTED: regulator of nonsense transcripts... 202 1e-58
ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts... 201 3e-58
ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts... 201 3e-58
ref|XP_010657968.1| PREDICTED: regulator of nonsense transcripts... 197 9e-57
ref|XP_009587163.1| PREDICTED: regulator of nonsense transcripts... 196 2e-56
ref|XP_010657969.1| PREDICTED: regulator of nonsense transcripts... 195 7e-56
ref|XP_009775100.1| PREDICTED: regulator of nonsense transcripts... 194 2e-55
ref|XP_009775092.1| PREDICTED: regulator of nonsense transcripts... 194 3e-55
ref|XP_009786002.1| PREDICTED: regulator of nonsense transcripts... 192 3e-55
ref|XP_011028362.1| PREDICTED: regulator of nonsense transcripts... 192 1e-54
ref|XP_012066695.1| PREDICTED: regulator of nonsense transcripts... 191 2e-54
>ref|XP_011092289.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Sesamum
indicum] gi|747089317|ref|XP_011092290.1| PREDICTED:
regulator of nonsense transcripts UPF3-like [Sesamum
indicum] gi|747089319|ref|XP_011092291.1| PREDICTED:
regulator of nonsense transcripts UPF3-like [Sesamum
indicum]
Length = 518
Score = 305 bits (782), Expect = 2e-98
Identities = 166/251 (66%), Positives = 182/251 (72%), Gaps = 1/251 (0%)
Frame = -3
Query: 755 KDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXXI 576
K+K TY LVPK DDQQLT+ SA LA+VS TDALE E+GGSG T I
Sbjct: 224 KEKPTYLLVPKQDDQQLTEKSANLAAVSRTDALELESGGSGSTGIAKKKILLLKGKEKEI 283
Query: 575 SNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSE 396
SNVSGGSSLQQNA+ PAK+S SSAP RQNQRRET+GRIIRSILLN+D RQNQP SQSE
Sbjct: 284 SNVSGGSSLQQNAATPAKSSQSSAPSRQNQRRETSGRIIRSILLNKDNRQNQPLPVSQSE 343
Query: 395 LRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDR 216
RI SNQ+RDKKPPR PS+Q QKETNG+ EDKVVSNDLHAVHTEKQDRR +NKDRPDR
Sbjct: 344 PRIHNSNQERDKKPPRSPSIQLLQKETNGIPEDKVVSNDLHAVHTEKQDRRMRNKDRPDR 403
Query: 215 GVWTPLRR-XXXXXXXXXXXXXXXXXXXXXXXAEDVKNEMLVTRGGEHRHIGSSRNSHYS 39
GVWTPLRR AEDVKNEMLV RGGE+R IGS R HYS
Sbjct: 404 GVWTPLRRSDGSHASDDSLSSSASRASQVLDPAEDVKNEMLVARGGEYRQIGSGRGGHYS 463
Query: 38 VENGSYRNGGR 6
V+NGS+R+G R
Sbjct: 464 VDNGSFRHGRR 474
>gb|EYU33279.1| hypothetical protein MIMGU_mgv1a009229mg [Erythranthe guttata]
Length = 348
Score = 267 bits (683), Expect = 1e-85
Identities = 153/252 (60%), Positives = 175/252 (69%), Gaps = 1/252 (0%)
Frame = -3
Query: 755 KDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXXI 576
KDK+ Y LVPK DDQQL SA LA+VSGTD LEGE+G G + I
Sbjct: 66 KDKTPYLLVPKQDDQQL--KSANLAAVSGTDPLEGESGEPGSSGIGKKKILLLKGNEKEI 123
Query: 575 SNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSE 396
SNVSG SSLQQNA++PAKN HSSAPFRQNQRRET GRIIR+ILLN+DTRQNQPP+GSQ E
Sbjct: 124 SNVSGASSLQQNAASPAKNLHSSAPFRQNQRRETGGRIIRTILLNKDTRQNQPPVGSQ-E 182
Query: 395 LRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDR 216
LR Q+SNQDRDK+PPRPPS+QSF KE +G LEDKVV +EKQ+RRTK +PDR
Sbjct: 183 LRTQSSNQDRDKRPPRPPSVQSFLKERDGFLEDKVVI-------SEKQERRTK---KPDR 232
Query: 215 GVWTPLRR-XXXXXXXXXXXXXXXXXXXXXXXAEDVKNEMLVTRGGEHRHIGSSRNSHYS 39
GVWTPLRR AED+K EML RGG+ R++GS R SH S
Sbjct: 233 GVWTPLRRSDGSHASDDSLSSSASQNSQTLDSAEDLKIEMLSVRGGDQRYVGSGRGSHSS 292
Query: 38 VENGSYRNGGRR 3
V+NGSYR+GGRR
Sbjct: 293 VDNGSYRHGGRR 304
>ref|XP_012842321.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Erythranthe
guttata]
Length = 507
Score = 267 bits (683), Expect = 9e-84
Identities = 153/252 (60%), Positives = 175/252 (69%), Gaps = 1/252 (0%)
Frame = -3
Query: 755 KDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXXI 576
KDK+ Y LVPK DDQQL SA LA+VSGTD LEGE+G G + I
Sbjct: 225 KDKTPYLLVPKQDDQQL--KSANLAAVSGTDPLEGESGEPGSSGIGKKKILLLKGNEKEI 282
Query: 575 SNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSE 396
SNVSG SSLQQNA++PAKN HSSAPFRQNQRRET GRIIR+ILLN+DTRQNQPP+GSQ E
Sbjct: 283 SNVSGASSLQQNAASPAKNLHSSAPFRQNQRRETGGRIIRTILLNKDTRQNQPPVGSQ-E 341
Query: 395 LRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDR 216
LR Q+SNQDRDK+PPRPPS+QSF KE +G LEDKVV +EKQ+RRTK +PDR
Sbjct: 342 LRTQSSNQDRDKRPPRPPSVQSFLKERDGFLEDKVVI-------SEKQERRTK---KPDR 391
Query: 215 GVWTPLRR-XXXXXXXXXXXXXXXXXXXXXXXAEDVKNEMLVTRGGEHRHIGSSRNSHYS 39
GVWTPLRR AED+K EML RGG+ R++GS R SH S
Sbjct: 392 GVWTPLRRSDGSHASDDSLSSSASQNSQTLDSAEDLKIEMLSVRGGDQRYVGSGRGSHSS 451
Query: 38 VENGSYRNGGRR 3
V+NGSYR+GGRR
Sbjct: 452 VDNGSYRHGGRR 463
>ref|XP_011088114.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Sesamum
indicum]
Length = 515
Score = 249 bits (637), Expect = 8e-77
Identities = 142/251 (56%), Positives = 166/251 (66%), Gaps = 1/251 (0%)
Frame = -3
Query: 752 DKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXXIS 573
D S+ SLVPK DDQ+ + A++S + GE+G SG T IS
Sbjct: 226 DSSSNSLVPKQDDQK-----SVSAAMSRNVSSPGESGVSGFTEIGKKKILLLKGKEKEIS 280
Query: 572 NVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSEL 393
NVSGGS LQQNA+ PAK S +SA + NQ+RE +GRIIRSILLNRDTRQNQP SQ EL
Sbjct: 281 NVSGGSFLQQNAATPAKTSQTSALPKLNQQREGSGRIIRSILLNRDTRQNQPSSRSQLEL 340
Query: 392 RIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDRG 213
RIQ+SNQDR+KKPPRPP++Q QK+TNG EDKVV NDL AVH EKQ+RRT+NKDRPDRG
Sbjct: 341 RIQSSNQDREKKPPRPPTVQLSQKDTNGAPEDKVVPNDLPAVHMEKQERRTRNKDRPDRG 400
Query: 212 VWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAE-DVKNEMLVTRGGEHRHIGSSRNSHYSV 36
VWTPLRR + K+EMLV RG E+R GS R SHYSV
Sbjct: 401 VWTPLRRSDGSHGSDDSLSSASQVLDSAEGTHVEKKHEMLVARGSEYRPSGSGRGSHYSV 460
Query: 35 ENGSYRNGGRR 3
+NGSYR+GGRR
Sbjct: 461 DNGSYRHGGRR 471
>ref|XP_012850387.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Erythranthe guttata] gi|604313123|gb|EYU26454.1|
hypothetical protein MIMGU_mgv1a004529mg [Erythranthe
guttata]
Length = 521
Score = 241 bits (614), Expect = 3e-73
Identities = 134/256 (52%), Positives = 159/256 (62%), Gaps = 5/256 (1%)
Frame = -3
Query: 755 KDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXXI 576
K+ S YSL+ K DDQQL D S +VSG +ALEGE GGSG + I
Sbjct: 225 KENSAYSLISKQDDQQLVDKSFNSTAVSGNEALEGERGGSG-SIGTGKKVLLLKGKEKEI 283
Query: 575 SNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSE 396
N SG S L QNA P+K SH SA +QN RR+ +GRIIRSILLNRDT Q QP G+QSE
Sbjct: 284 FNASGSSLLHQNAETPSKTSHISASSKQNPRRDASGRIIRSILLNRDTSQGQPLTGTQSE 343
Query: 395 LRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDR 216
LR+Q QD+DK+PPRPPSMQ QK+TNG E K+V NDL+AV TEKQ+RRTKNKDRPDR
Sbjct: 344 LRVQNPLQDKDKRPPRPPSMQLLQKDTNGASEGKIVHNDLYAVPTEKQERRTKNKDRPDR 403
Query: 215 GVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAE-----DVKNEMLVTRGGEHRHIGSSRN 51
GVW PLRR + K++M V RGG++R GS R
Sbjct: 404 GVWAPLRRSDGSHASDDSLSSSGSQTSQVVDPAEGTRVERKHDMPVARGGDYRSTGSGRG 463
Query: 50 SHYSVENGSYRNGGRR 3
++YS +NGSYR GRR
Sbjct: 464 NNYSADNGSYR--GRR 477
>ref|XP_012850385.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Erythranthe guttata] gi|604313122|gb|EYU26453.1|
hypothetical protein MIMGU_mgv1a004529mg [Erythranthe
guttata]
Length = 522
Score = 241 bits (614), Expect = 3e-73
Identities = 134/256 (52%), Positives = 159/256 (62%), Gaps = 5/256 (1%)
Frame = -3
Query: 755 KDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXXI 576
K+ S YSL+ K DDQQL D S +VSG +ALEGE GGSG + I
Sbjct: 226 KENSAYSLISKQDDQQLVDKSFNSTAVSGNEALEGERGGSG-SIGTGKKVLLLKGKEKEI 284
Query: 575 SNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSE 396
N SG S L QNA P+K SH SA +QN RR+ +GRIIRSILLNRDT Q QP G+QSE
Sbjct: 285 FNASGSSLLHQNAETPSKTSHISASSKQNPRRDASGRIIRSILLNRDTSQGQPLTGTQSE 344
Query: 395 LRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDR 216
LR+Q QD+DK+PPRPPSMQ QK+TNG E K+V NDL+AV TEKQ+RRTKNKDRPDR
Sbjct: 345 LRVQNPLQDKDKRPPRPPSMQLLQKDTNGASEGKIVHNDLYAVPTEKQERRTKNKDRPDR 404
Query: 215 GVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAE-----DVKNEMLVTRGGEHRHIGSSRN 51
GVW PLRR + K++M V RGG++R GS R
Sbjct: 405 GVWAPLRRSDGSHASDDSLSSSGSQTSQVVDPAEGTRVERKHDMPVARGGDYRSTGSGRG 464
Query: 50 SHYSVENGSYRNGGRR 3
++YS +NGSYR GRR
Sbjct: 465 NNYSADNGSYR--GRR 478
>emb|CDO97628.1| unnamed protein product [Coffea canephora]
Length = 517
Score = 219 bits (559), Expect = 4e-65
Identities = 126/255 (49%), Positives = 159/255 (62%), Gaps = 3/255 (1%)
Frame = -3
Query: 758 GKDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXX 579
GKDKSTY LVPK DDQ L+D S T A+ G LE E+G SGPT
Sbjct: 224 GKDKSTYILVPKQDDQHLSDKSVTSAAACGNGELEEESGDSGPTDSGKKKILLLKGKEKE 283
Query: 578 ISNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQS 399
I ++SGGS +QQ+ ++P KN SSA +QNQRRE +G+IIRSILL +D RQNQP +S
Sbjct: 284 IPHMSGGSPVQQSTASPFKNPPSSA-LKQNQRREASGKIIRSILL-KDNRQNQPS-SVRS 340
Query: 398 ELRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPD 219
+ + QT N +RDK+PPRPPS+Q QK+ N +DKV ND+H +H+EKQ++RT+NKDRPD
Sbjct: 341 DQQNQTVNLERDKRPPRPPSVQLLQKDANVASDDKV-PNDIHNIHSEKQEKRTRNKDRPD 399
Query: 218 RGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAE---DVKNEMLVTRGGEHRHIGSSRNS 48
R VWTPLRR ++K++M RGGE RH GS R S
Sbjct: 400 RVVWTPLRRSDGSHTSDESLSSSASQSAVDATEGTQLEMKSDMSSARGGEFRHGGSGRGS 459
Query: 47 HYSVENGSYRNGGRR 3
S +NGSYR+GGRR
Sbjct: 460 QSSTDNGSYRHGGRR 474
>ref|XP_009587503.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Nicotiana tomentosiformis]
Length = 508
Score = 208 bits (530), Expect = 6e-61
Identities = 123/257 (47%), Positives = 151/257 (58%), Gaps = 5/257 (1%)
Frame = -3
Query: 758 GKDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXX 579
GKDK + LVPK DDQQ + S T A SG DA+E E GG+
Sbjct: 224 GKDKR-HILVPKRDDQQQAEKSGTSAPGSGADAVEEETGGAADVGKKKILLLKGKEREIP 282
Query: 578 ISNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQS 399
NVS GS +Q NA+ KN+ +S+ +QNQRRE +G+IIRSILL +D RQNQ P SQ
Sbjct: 283 --NVSSGSLIQDNAAPIVKNTITSSAPQQNQRREASGKIIRSILL-KDARQNQAPSASQQ 339
Query: 398 ELRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPD 219
E +QD+DKKPPRPPS+Q FQKE NGV EDK+V DLH VHTEKQ+RR++ +DRPD
Sbjct: 340 EQH----SQDKDKKPPRPPSVQLFQKEINGVNEDKIVGTDLHVVHTEKQERRSRIRDRPD 395
Query: 218 RGVWTPLRR-----XXXXXXXXXXXXXXXXXXXXXXXAEDVKNEMLVTRGGEHRHIGSSR 54
RGVWTPLRR + KN++ RGGE R +GS R
Sbjct: 396 RGVWTPLRRADSLHASDESLSSSTSQSSEVLDSLEGSQGETKNDLPNVRGGEFRPMGSGR 455
Query: 53 NSHYSVENGSYRNGGRR 3
NSH S +NG+Y+ G R
Sbjct: 456 NSHSSFDNGTYKRRGMR 472
>ref|XP_009587502.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Nicotiana tomentosiformis]
Length = 517
Score = 208 bits (530), Expect = 7e-61
Identities = 123/257 (47%), Positives = 151/257 (58%), Gaps = 5/257 (1%)
Frame = -3
Query: 758 GKDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXX 579
GKDK + LVPK DDQQ + S T A SG DA+E E GG+
Sbjct: 233 GKDKR-HILVPKRDDQQQAEKSGTSAPGSGADAVEEETGGAADVGKKKILLLKGKEREIP 291
Query: 578 ISNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQS 399
NVS GS +Q NA+ KN+ +S+ +QNQRRE +G+IIRSILL +D RQNQ P SQ
Sbjct: 292 --NVSSGSLIQDNAAPIVKNTITSSAPQQNQRREASGKIIRSILL-KDARQNQAPSASQQ 348
Query: 398 ELRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPD 219
E +QD+DKKPPRPPS+Q FQKE NGV EDK+V DLH VHTEKQ+RR++ +DRPD
Sbjct: 349 EQH----SQDKDKKPPRPPSVQLFQKEINGVNEDKIVGTDLHVVHTEKQERRSRIRDRPD 404
Query: 218 RGVWTPLRR-----XXXXXXXXXXXXXXXXXXXXXXXAEDVKNEMLVTRGGEHRHIGSSR 54
RGVWTPLRR + KN++ RGGE R +GS R
Sbjct: 405 RGVWTPLRRADSLHASDESLSSSTSQSSEVLDSLEGSQGETKNDLPNVRGGEFRPMGSGR 464
Query: 53 NSHYSVENGSYRNGGRR 3
NSH S +NG+Y+ G R
Sbjct: 465 NSHSSFDNGTYKRRGMR 481
>ref|XP_015579218.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1
[Ricinus communis]
Length = 527
Score = 202 bits (515), Expect = 1e-58
Identities = 121/258 (46%), Positives = 158/258 (61%), Gaps = 6/258 (2%)
Frame = -3
Query: 758 GKDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXX 579
GKDKSTY LVPK DDQQ +D S AS SGT+ LE E+G SG T
Sbjct: 229 GKDKSTYLLVPKRDDQQFSDKSTPFASASGTEVLEDESGVSGITDTGKKKILLLKGKEKE 288
Query: 578 ISNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQS 399
IS +SGG S +QNA++ KN SSA +Q+QRRE++GRIIRSILLN+D+RQNQ G QS
Sbjct: 289 ISALSGGMS-KQNAASFDKNVTSSA-IKQSQRRESSGRIIRSILLNKDSRQNQSS-GFQS 345
Query: 398 ELRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPD 219
E +IQ+SN +++K+ PRP +Q K+ NG +DK V NDLH EKQ++RT+NKDRPD
Sbjct: 346 EQQIQSSNLEKEKRLPRPAHVQLVLKDVNGSSDDKFVGNDLHGFSGEKQEKRTRNKDRPD 405
Query: 218 RGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAE------DVKNEMLVTRGGEHRHIGSS 57
R VWTPLRR D+K + +R G+ + +GS
Sbjct: 406 RVVWTPLRRSDGSYASDESLSSSASQSTHTGQDSSQGNLGDIKVDSSNSRSGDVKTLGSG 465
Query: 56 RNSHYSVENGSYRNGGRR 3
R+SH S++NGS+++ GRR
Sbjct: 466 RSSHSSLDNGSHKHFGRR 483
>ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Solanum tuberosum] gi|565345688|ref|XP_006339923.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X1 [Solanum tuberosum]
gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of
nonsense transcripts UPF3-like isoform X1 [Solanum
tuberosum]
Length = 508
Score = 201 bits (512), Expect = 3e-58
Identities = 119/256 (46%), Positives = 147/256 (57%), Gaps = 5/256 (1%)
Frame = -3
Query: 755 KDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXXI 576
KDKS Y L+PK DQQL+ S + A S D +EGE G S
Sbjct: 222 KDKS-YILLPKRGDQQLSVKSGSSAPGSEIDVVEGEIGRSVTADSGKKKILLLKGKEKEG 280
Query: 575 SNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSE 396
NVSGGS QQN S+ KNS S + +QNQR+E +GRIIRSILL +D RQNQ S
Sbjct: 281 PNVSGGSLAQQNVSSALKNSPSLSALKQNQRQEASGRIIRSILL-KDARQNQSAFQSDQI 339
Query: 395 LRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDR 216
QD+D +PPRPPSMQ FQK+T+G EDKVV N+ H VH EKQ+RR++N+DRPDR
Sbjct: 340 -------QDKDMRPPRPPSMQLFQKDTSGANEDKVVGNEKHVVHIEKQERRSRNRDRPDR 392
Query: 215 GVWTPLRR-----XXXXXXXXXXXXXXXXXXXXXXXAEDVKNEMLVTRGGEHRHIGSSRN 51
GVW PLRR ++KN++ + RG E R IGS RN
Sbjct: 393 GVWAPLRRADSSQASNGSLSSGIPQSSQVREFVEGGQGELKNDLPIARGTEFRPIGSGRN 452
Query: 50 SHYSVENGSYRNGGRR 3
SH S +NG+Y++GGRR
Sbjct: 453 SHSSADNGNYKHGGRR 468
>ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
vinifera] gi|297739512|emb|CBI29694.3| unnamed protein
product [Vitis vinifera]
Length = 519
Score = 201 bits (512), Expect = 3e-58
Identities = 114/255 (44%), Positives = 154/255 (60%), Gaps = 4/255 (1%)
Frame = -3
Query: 755 KDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXXI 576
KDKST+ LVPK DDQ L+D S LA+ G +ALE E+G SG I
Sbjct: 225 KDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKVLLLKGKEREI 284
Query: 575 SNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSE 396
S+ LQQN ++P KN + +QNQRRE +GRIIRSILLN+D RQ+Q + Q+E
Sbjct: 285 SH----HLLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSM-FQTE 339
Query: 395 LRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDR 216
+ Q SN +++K+PPRPP +Q KETNG +DKVV ND+H+ +EKQD+RT+NKDRPDR
Sbjct: 340 QQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNKDRPDR 399
Query: 215 GVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAE----DVKNEMLVTRGGEHRHIGSSRNS 48
GVWTPLRR E +++++M R GE + +GS R
Sbjct: 400 GVWTPLRRSDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNARSGEVKALGSGRGG 459
Query: 47 HYSVENGSYRNGGRR 3
H +++NGS+++ GRR
Sbjct: 460 HSALDNGSHKHSGRR 474
>ref|XP_010657968.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Vitis
vinifera]
Length = 515
Score = 197 bits (502), Expect = 9e-57
Identities = 112/255 (43%), Positives = 152/255 (59%), Gaps = 4/255 (1%)
Frame = -3
Query: 755 KDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXXI 576
KDKST+ LVPK DDQ L+D S LA+ G +ALE E+G SG I
Sbjct: 225 KDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKVLLLKGKEREI 284
Query: 575 SNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSE 396
S+ QN ++P KN + +QNQRRE +GRIIRSILLN+D RQ+Q + Q+E
Sbjct: 285 SH--------QNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSM-FQTE 335
Query: 395 LRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDR 216
+ Q SN +++K+PPRPP +Q KETNG +DKVV ND+H+ +EKQD+RT+NKDRPDR
Sbjct: 336 QQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNKDRPDR 395
Query: 215 GVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAE----DVKNEMLVTRGGEHRHIGSSRNS 48
GVWTPLRR E +++++M R GE + +GS R
Sbjct: 396 GVWTPLRRSDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNARSGEVKALGSGRGG 455
Query: 47 HYSVENGSYRNGGRR 3
H +++NGS+++ GRR
Sbjct: 456 HSALDNGSHKHSGRR 470
>ref|XP_009587163.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Nicotiana
tomentosiformis]
Length = 469
Score = 196 bits (497), Expect = 2e-56
Identities = 110/189 (58%), Positives = 129/189 (68%)
Frame = -3
Query: 758 GKDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXX 579
GKDKS Y LVPK DDQQL+D S T A SG D +EGE G S
Sbjct: 221 GKDKS-YILVPKRDDQQLSDKSGTSAPGSGIDLVEGEIGRSVTADSGKKKILLLKGKEKE 279
Query: 578 ISNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQS 399
NVSGGS QQN ++ KNS SS+ +QNQR+E +G+IIRSILL +D RQNQ SQS
Sbjct: 280 GPNVSGGSLAQQNVASTLKNSPSSSAPKQNQRQEASGKIIRSILL-KDARQNQS--ASQS 336
Query: 398 ELRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPD 219
EL+IQ D+DK+PPRPPSMQ FQK+T+G EDKV NDLH VH EKQ+RR++N+DRPD
Sbjct: 337 ELQIQ----DKDKRPPRPPSMQLFQKDTSGANEDKVAGNDLHVVHIEKQERRSRNRDRPD 392
Query: 218 RGVWTPLRR 192
RGVW PLRR
Sbjct: 393 RGVWAPLRR 401
>ref|XP_010657969.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Vitis
vinifera]
Length = 514
Score = 195 bits (496), Expect = 7e-56
Identities = 111/255 (43%), Positives = 151/255 (59%), Gaps = 4/255 (1%)
Frame = -3
Query: 755 KDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXXI 576
KDKST+ LVPK DDQ L+D S LA+ G +ALE E+G SG I
Sbjct: 225 KDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKVLLLKGKEREI 284
Query: 575 SNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQSE 396
S+ N ++P KN + +QNQRRE +GRIIRSILLN+D RQ+Q + Q+E
Sbjct: 285 SH---------NVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSM-FQTE 334
Query: 395 LRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPDR 216
+ Q SN +++K+PPRPP +Q KETNG +DKVV ND+H+ +EKQD+RT+NKDRPDR
Sbjct: 335 QQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNKDRPDR 394
Query: 215 GVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAE----DVKNEMLVTRGGEHRHIGSSRNS 48
GVWTPLRR E +++++M R GE + +GS R
Sbjct: 395 GVWTPLRRSDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNARSGEVKALGSGRGG 454
Query: 47 HYSVENGSYRNGGRR 3
H +++NGS+++ GRR
Sbjct: 455 HSALDNGSHKHSGRR 469
>ref|XP_009775100.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Nicotiana sylvestris]
Length = 508
Score = 194 bits (492), Expect = 2e-55
Identities = 119/257 (46%), Positives = 145/257 (56%), Gaps = 5/257 (1%)
Frame = -3
Query: 758 GKDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXX 579
GKDK + LVP D QQ + S T A SG DA+E E GG+
Sbjct: 224 GKDKR-HVLVPNRDGQQQAEKSGTSAPGSGADAVEEETGGAADAGKKKILLLKGKEKEIP 282
Query: 578 ISNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQS 399
NVS GS +Q NA+ KN+ +S+ +QNQRRE +G+IIRSILL D QNQ SQ
Sbjct: 283 --NVSSGSVIQGNAAPIVKNTITSSAPQQNQRREASGKIIRSILLE-DAHQNQALSASQQ 339
Query: 398 ELRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPD 219
E +QD+DKKPPRPPS+Q FQKE NGV EDKVV DL VHTEKQ+RR++ +DRPD
Sbjct: 340 EQH----SQDKDKKPPRPPSVQLFQKEINGVNEDKVVGTDLRVVHTEKQERRSRIRDRPD 395
Query: 218 RGVWTPLRR-----XXXXXXXXXXXXXXXXXXXXXXXAEDVKNEMLVTRGGEHRHIGSSR 54
RGVWTPLRR + KN++ RGGE R +GS R
Sbjct: 396 RGVWTPLRRSDRLHASDESMSSSTSQSSEVLDSLEGTQGETKNDLPNVRGGEFRPMGSGR 455
Query: 53 NSHYSVENGSYRNGGRR 3
NSH S +NG+Y+ G R
Sbjct: 456 NSHSSFDNGTYKRRGMR 472
>ref|XP_009775092.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Nicotiana sylvestris]
Length = 517
Score = 194 bits (492), Expect = 3e-55
Identities = 119/257 (46%), Positives = 145/257 (56%), Gaps = 5/257 (1%)
Frame = -3
Query: 758 GKDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXX 579
GKDK + LVP D QQ + S T A SG DA+E E GG+
Sbjct: 233 GKDKR-HVLVPNRDGQQQAEKSGTSAPGSGADAVEEETGGAADAGKKKILLLKGKEKEIP 291
Query: 578 ISNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQS 399
NVS GS +Q NA+ KN+ +S+ +QNQRRE +G+IIRSILL D QNQ SQ
Sbjct: 292 --NVSSGSVIQGNAAPIVKNTITSSAPQQNQRREASGKIIRSILLE-DAHQNQALSASQQ 348
Query: 398 ELRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPD 219
E +QD+DKKPPRPPS+Q FQKE NGV EDKVV DL VHTEKQ+RR++ +DRPD
Sbjct: 349 EQH----SQDKDKKPPRPPSVQLFQKEINGVNEDKVVGTDLRVVHTEKQERRSRIRDRPD 404
Query: 218 RGVWTPLRR-----XXXXXXXXXXXXXXXXXXXXXXXAEDVKNEMLVTRGGEHRHIGSSR 54
RGVWTPLRR + KN++ RGGE R +GS R
Sbjct: 405 RGVWTPLRRSDRLHASDESMSSSTSQSSEVLDSLEGTQGETKNDLPNVRGGEFRPMGSGR 464
Query: 53 NSHYSVENGSYRNGGRR 3
NSH S +NG+Y+ G R
Sbjct: 465 NSHSSFDNGTYKRRGMR 481
>ref|XP_009786002.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Nicotiana
sylvestris]
Length = 469
Score = 192 bits (489), Expect = 3e-55
Identities = 109/189 (57%), Positives = 127/189 (67%)
Frame = -3
Query: 758 GKDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXX 579
GKDKS Y LVPK DDQQL+D S T A SG D +EGE G S
Sbjct: 221 GKDKS-YILVPKRDDQQLSDKSRTSAPGSGIDLVEGEIGRSVTADSGKKKILLLKGKEKE 279
Query: 578 ISNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQS 399
NVSGGS QQN ++ KNS SS+ +QNQR+E +GRIIRSILL +D RQNQ SQS
Sbjct: 280 GPNVSGGSLAQQNVASTLKNSPSSSAPKQNQRQEASGRIIRSILL-KDARQNQS--ASQS 336
Query: 398 ELRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPD 219
E +IQ D+DK+PPRPPSMQ FQK+T+G EDK NDLH VH EKQ+RR++N+DRPD
Sbjct: 337 EHQIQ----DKDKRPPRPPSMQLFQKDTSGANEDKAAGNDLHVVHVEKQERRSRNRDRPD 392
Query: 218 RGVWTPLRR 192
RGVW PLRR
Sbjct: 393 RGVWAPLRR 401
>ref|XP_011028362.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Populus euphratica]
Length = 521
Score = 192 bits (488), Expect = 1e-54
Identities = 118/258 (45%), Positives = 153/258 (59%), Gaps = 6/258 (2%)
Frame = -3
Query: 758 GKDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXX 579
GKDKSTY VPK D QQL+ N+ TL S SGT LE E+G SG T
Sbjct: 224 GKDKSTYVQVPKRDGQQLS-NAVTLGSGSGTAVLEDESGVSGITDSGKKKILLLKGKEKE 282
Query: 578 ISNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQS 399
IS V+G + QQ+ S+ +N SS + +QRRET+GR+IRSILLN+D+R + G S
Sbjct: 283 ISLVTGTMAQQQSISSSDRNIISSTVLK-SQRRETSGRMIRSILLNKDSRHIRSS-GVHS 340
Query: 398 ELRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPD 219
E ++QTSN ++DK+PPRPP Q K+ NG +DKVV NDLH EKQ++RT+NKDRPD
Sbjct: 341 EPQMQTSNLEKDKRPPRPPHAQLGLKDANGTPDDKVVGNDLHGFPNEKQEKRTRNKDRPD 400
Query: 218 RGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAE------DVKNEMLVTRGGEHRHIGSS 57
RGVWTPLRR DVK + L R GE + +GS
Sbjct: 401 RGVWTPLRRSDGSYASDESLSSSASQSTQSVFDSSQGNHGDVKVDNLNLRSGEVKVLGSG 460
Query: 56 RNSHYSVENGSYRNGGRR 3
R++H S++NGS+++ GRR
Sbjct: 461 RSNHSSLDNGSHKHFGRR 478
>ref|XP_012066695.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Jatropha curcas] gi|643736043|gb|KDP42459.1|
hypothetical protein JCGZ_00256 [Jatropha curcas]
Length = 510
Score = 191 bits (486), Expect = 2e-54
Identities = 119/258 (46%), Positives = 154/258 (59%), Gaps = 6/258 (2%)
Frame = -3
Query: 758 GKDKSTYSLVPKHDDQQLTDNSATLASVSGTDALEGENGGSGPTXXXXXXXXXXXXXXXX 579
GKDKSTY LVPK DDQQL+D + TL + SG + LE E+G SG T
Sbjct: 222 GKDKSTYILVPKRDDQQLSDKAVTLGTASGAEVLEDESGASGITDAGKKKILLLKGKEKE 281
Query: 578 ISNVSGGSSLQQNASNPAKNSHSSAPFRQNQRRETNGRIIRSILLNRDTRQNQPPLGSQS 399
IS+ QNA++ KN SSA +QNQRRE +GRIIRSILLN+++RQNQ G QS
Sbjct: 282 ISD--------QNAASFDKNVISSA-VKQNQRREASGRIIRSILLNKESRQNQSS-GIQS 331
Query: 398 ELRIQTSNQDRDKKPPRPPSMQSFQKETNGVLEDKVVSNDLHAVHTEKQDRRTKNKDRPD 219
E ++QTSN +++K+PPRPP +Q TNG L+DKVV NDLH EKQ++RT+NKDRPD
Sbjct: 332 EHQMQTSNSEKEKRPPRPPHVQ-LVLNTNGALDDKVVINDLHGFSGEKQEKRTRNKDRPD 390
Query: 218 RGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXAE------DVKNEMLVTRGGEHRHIGSS 57
R VWTPLRR D+K + +R GE + + +
Sbjct: 391 RVVWTPLRRSDGSYASDESLSLSASQSTQSGVDSSQGNLGDLKVDPSNSRSGEVKTL-TG 449
Query: 56 RNSHYSVENGSYRNGGRR 3
R SH S++NGS+++ GRR
Sbjct: 450 RGSHSSLDNGSHKHFGRR 467