BLASTX nr result

ID: Rehmannia27_contig00019882 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00019882
         (470 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015054812.1| PREDICTED: uncharacterized protein LOC107001...    59   1e-07
ref|XP_015078407.1| PREDICTED: uncharacterized protein LOC107022...    56   2e-06
ref|YP_007761643.1| capsid protein [Rose yellow vein virus] gi|3...    54   8e-06

>ref|XP_015054812.1| PREDICTED: uncharacterized protein LOC107001178, partial [Solanum
           pennellii]
          Length = 269

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 5/132 (3%)
 Frame = -1

Query: 452 KQALYSLELLDICHIDEYIKLFTEYRWKSKI---EEKEAAQLFFAKIPSPWREMFIREYK 282
           +Q +  L +  +C+I+EY   F EY +K+K    E KE  + +F K+P P+    I+++ 
Sbjct: 27  RQLMTKLAICKMCYIEEYTCAFKEYYYKAKYDFDEAKEIRKQYFTKLPEPFSTKVIKDWN 86

Query: 281 SATDLDTVARKMSFLKAKLSEWCYQAALYRNYKRLRGINKAV--PLCCVDNDIPTVVGGQ 108
               +DT+  ++ F    L +W  Q  L  N K    + K +   L C  N I    G  
Sbjct: 87  DEGLVDTLGARIKF----LHQWFIQ--LCENQKEKLKMEKVLNKNLACCKNKIAPQFGYI 140

Query: 107 PRRHKKKKERSH 72
            + +KKKK R +
Sbjct: 141 TKNYKKKKPRQY 152


>ref|XP_015078407.1| PREDICTED: uncharacterized protein LOC107022252 [Solanum pennellii]
          Length = 431

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
 Frame = -1

Query: 452 KQALYSLELLDICHIDEYIKLFTEYRWKSKI---EEKEAAQLFFAKIPSPWREMFIREYK 282
           +Q +  L +  +C+I+EY   F EY +K+K    E KE  Q +F K+P P+    I+++ 
Sbjct: 157 RQLMTKLAICKMCYIEEYTCAFKEYYYKAKYNLNEAKEIRQQYFTKLPEPFSTKIIKDWN 216

Query: 281 SATDLDTVARKMSFLKAKLSEWCYQAALYRNYKRLRGINKAVP---LCCVDNDIPTVVGG 111
               +DT+  ++ F    L +W  Q  L  N K    + K VP   L C  N +    G 
Sbjct: 217 DEGLVDTLGARIKF----LHQWFIQ--LCENQKEKLKMEK-VPNKNLACCKNKMAPQFGC 269

Query: 110 QPRRHKKKKERSH 72
             ++ K KK +++
Sbjct: 270 TNKKQKPKKYKNY 282


>ref|YP_007761643.1| capsid protein [Rose yellow vein virus] gi|397559411|gb|AFO54490.1|
           capsid protein [Rose yellow vein virus]
          Length = 498

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 36/137 (26%), Positives = 73/137 (53%), Gaps = 7/137 (5%)
 Frame = -1

Query: 464 RKRYKQALYSLELLDICHIDEYIKLFTEYRW-KSKIEEKEAAQLFFAKIPSPWREMFIRE 288
           +++ K  L +L L DI  +D+Y  +FT+  W   ++   E    +F+K+P P+ E   +E
Sbjct: 269 QEKAKHLLQTLRLCDISMLDKYNVIFTKLYWIAGEVTNLETLNSYFSKLPPPFNEKAKKE 328

Query: 287 YKSATDLDTVARKMSFLKAKLSEWCYQAALYRNYKRLRGINK-AVPLCCVDNDIPTV-VG 114
           Y S  + DT+ +++  ++  L ++C++       +RL  + K +V   C  ++ P + +G
Sbjct: 329 YVS-DEKDTIGKRVRHVQNILEQYCFE-------RRLANVTKQSVKAICAKHNPPNLDIG 380

Query: 113 GQPRR----HKKKKERS 75
            +  R    HK+K++ S
Sbjct: 381 CRQERSVFKHKRKRKFS 397


Top