BLASTX nr result
ID: Rehmannia27_contig00019844
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00019844
(717 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS72238.1| hypothetical protein M569_02516, partial [Genlise... 227 1e-96
ref|XP_012832806.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 208 2e-91
ref|XP_013627096.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 189 6e-74
ref|XP_011099903.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 249 1e-72
ref|XP_011070096.1| PREDICTED: U5 small nuclear ribonucleoprotei... 248 2e-72
ref|XP_006428571.1| hypothetical protein CICLE_v100108902mg, par... 223 9e-70
emb|CDP11347.1| unnamed protein product [Coffea canephora] 217 5e-68
ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotei... 231 3e-66
emb|CDP17811.1| unnamed protein product [Coffea canephora] 230 5e-66
gb|KVH95384.1| AAA+ ATPase domain-containing protein, partial [C... 229 9e-66
ref|XP_010270595.1| PREDICTED: U5 small nuclear ribonucleoprotei... 229 2e-65
ref|XP_009606072.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 228 4e-65
ref|XP_009787289.1| PREDICTED: U5 small nuclear ribonucleoprotei... 227 8e-65
ref|XP_013403400.1| PREDICTED: U5 small nuclear ribonucleoprotei... 162 2e-64
ref|XP_015079049.1| PREDICTED: U5 small nuclear ribonucleoprotei... 225 3e-64
ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotei... 225 3e-64
ref|XP_010537248.1| PREDICTED: U5 small nuclear ribonucleoprotei... 225 3e-64
ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase ... 225 3e-64
ref|XP_010670756.1| PREDICTED: U5 small nuclear ribonucleoprotei... 225 4e-64
ref|XP_010061242.1| PREDICTED: U5 small nuclear ribonucleoprotei... 225 4e-64
>gb|EPS72238.1| hypothetical protein M569_02516, partial [Genlisea aurea]
Length = 1210
Score = 227 bits (578), Expect(2) = 1e-96
Identities = 109/135 (80%), Positives = 123/135 (91%)
Frame = +3
Query: 300 ENIETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVLDSDNVKAGEDVS 479
+NIETVFDLVEMEDDERRELLQM+DS+L+DIARFCNRFPNIDLTY+V+D D V+AG DVS
Sbjct: 1057 KNIETVFDLVEMEDDERRELLQMTDSELMDIARFCNRFPNIDLTYEVVDGDGVEAGRDVS 1116
Query: 480 VHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKRVTLQRKSRVKLD 659
+ V+LERD EGRTEVG VDAPRYPK KE GWWLVVGD KTNQLVAIKRVTLQRKSRV+LD
Sbjct: 1117 LQVNLERDLEGRTEVGSVDAPRYPKQKEEGWWLVVGDIKTNQLVAIKRVTLQRKSRVRLD 1176
Query: 660 FTAPTEPGKKTHSVF 704
FTAP E GKK ++++
Sbjct: 1177 FTAPKESGKKDYTLY 1191
Score = 154 bits (390), Expect(2) = 1e-96
Identities = 78/88 (88%), Positives = 84/88 (95%)
Frame = +1
Query: 25 NVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEVSQ 204
NVKANALL AHFSR+ IGGNLASDQQ+VLIYA RLLQA+VDVISSNGWLSLALLAME+SQ
Sbjct: 968 NVKANALLQAHFSRRPIGGNLASDQQQVLIYASRLLQAMVDVISSNGWLSLALLAMELSQ 1027
Query: 205 MVTQGMWERDSMLLQLPPFTKELAKRCQ 288
MVTQGMWERDS+LLQLP FT+ELAKRCQ
Sbjct: 1028 MVTQGMWERDSVLLQLPHFTEELAKRCQ 1055
>ref|XP_012832806.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase [Erythranthe guttata]
Length = 2170
Score = 208 bits (529), Expect(2) = 2e-91
Identities = 99/135 (73%), Positives = 118/135 (87%)
Frame = +3
Query: 300 ENIETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVLDSDNVKAGEDVS 479
+ +ET+ DLV+M+DDERRE LQMSDSQ I CNR P+ DLTYDV + DNV+AGED+S
Sbjct: 2008 KKVETIADLVKMDDDERREXLQMSDSQXW-ICSMCNRLPDXDLTYDVTNEDNVRAGEDIS 2066
Query: 480 VHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKRVTLQRKSRVKLD 659
VHVSLERD +GRTEVGPV+APRYPKSKE GWWLVVGDTKTNQL+AIKRV LQRKS+VKL+
Sbjct: 2067 VHVSLERDLQGRTEVGPVNAPRYPKSKEEGWWLVVGDTKTNQLLAIKRVALQRKSKVKLE 2126
Query: 660 FTAPTEPGKKTHSVF 704
FTAPTEPG++T+ ++
Sbjct: 2127 FTAPTEPGERTYQLY 2141
Score = 156 bits (394), Expect(2) = 2e-91
Identities = 79/95 (83%), Positives = 85/95 (89%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+PNVKANALL AHFSRQ IGG LASDQQEV+I A RLLQA+VDVISS+GWL+LALLAMEV
Sbjct: 1914 DPNVKANALLQAHFSRQTIGGTLASDQQEVVINASRLLQAMVDVISSSGWLNLALLAMEV 1973
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGK 303
SQMVTQGMWERD MLLQLP FTK+ AKRC ENP K
Sbjct: 1974 SQMVTQGMWERDXMLLQLPHFTKDXAKRCMENPWK 2008
>ref|XP_013627096.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase [Brassica oleracea var. oleracea]
Length = 2120
Score = 189 bits (480), Expect(2) = 6e-74
Identities = 88/132 (66%), Positives = 114/132 (86%), Gaps = 2/132 (1%)
Frame = +3
Query: 303 NIETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVLDSDNVKAGEDVSV 482
NIETVFDLVEMED R+ELLQMS++QL+DIARFCNR+PNIDL Y+V+DS V G+++++
Sbjct: 1989 NIETVFDLVEMEDGRRQELLQMSNAQLLDIARFCNRYPNIDLAYEVVDSKEVTPGKEITL 2048
Query: 483 HVSLERDFE--GRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKRVTLQRKSRVKL 656
+ L+RD E GRT+VG V+APRYPK+KE GWW+VVGDTKTNQL+AIKR++LQ K++V+L
Sbjct: 2049 QLMLQRDMEMEGRTQVGSVEAPRYPKTKEEGWWVVVGDTKTNQLLAIKRISLQEKAKVRL 2108
Query: 657 DFTAPTEPGKKT 692
F PTEPG+K+
Sbjct: 2109 AFAVPTEPGEKS 2120
Score = 116 bits (291), Expect(2) = 6e-74
Identities = 66/101 (65%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Frame = +1
Query: 10 SVMNPNVKANALLHAHFSRQ-MIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALL 186
S NP + LL A+FSRQ +I NLA DQ+EV++ A RL+Q +VDVISSN L+LALL
Sbjct: 1894 SFENPKC-TDTLLQAYFSRQKIISENLAMDQREVVLSATRLVQGMVDVISSNDCLNLALL 1952
Query: 187 AMEVSQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTL 309
AMEVSQMVTQGMWERDS LLQLP F +LAKRCQEN +T+
Sbjct: 1953 AMEVSQMVTQGMWERDSTLLQLPHFINDLAKRCQENNIETV 1993
>ref|XP_011099903.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Sesamum indicum]
Length = 2166
Score = 249 bits (636), Expect = 1e-72
Identities = 124/143 (86%), Positives = 133/143 (93%)
Frame = +3
Query: 276 KEVPGKSRENIETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVLDSDN 455
+E PGKS IETVFDLVEMEDDERR+LLQMSDSQL+DIARFCNRFPNIDLTY+VLDSDN
Sbjct: 1998 QENPGKS---IETVFDLVEMEDDERRDLLQMSDSQLMDIARFCNRFPNIDLTYEVLDSDN 2054
Query: 456 VKAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKRVTLQ 635
V AGEDVSVHVSLERD EGR EVGPVDAPRYPKSKE GWWLVVGDTKTNQL+AIKRV LQ
Sbjct: 2055 VGAGEDVSVHVSLERDLEGRIEVGPVDAPRYPKSKEEGWWLVVGDTKTNQLLAIKRVALQ 2114
Query: 636 RKSRVKLDFTAPTEPGKKTHSVF 704
RKSRVKLDFTAP EPGKKT++++
Sbjct: 2115 RKSRVKLDFTAPAEPGKKTYTLY 2137
Score = 180 bits (456), Expect = 2e-48
Identities = 120/238 (50%), Positives = 147/238 (61%), Gaps = 5/238 (2%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+PNVKANALL AHFSRQ IGGNLASDQQEVLIYA RLLQA+VDVISSNGWL+LALLAMEV
Sbjct: 1909 DPNVKANALLQAHFSRQTIGGNLASDQQEVLIYASRLLQAMVDVISSNGWLNLALLAMEV 1968
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTLRRSLILWRWRMMKGESSCKCQTH 378
SQMVTQGMWERDSMLLQLP FTKELAKRCQENPGK++ L M+ +
Sbjct: 1969 SQMVTQGMWERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLVE---MEDDERRDLLQM 2025
Query: 379 S*SILLDFVIVSQTLI*LTMCWIVIMLKLEKMLVCMSVLNVILKEGQRWGLWM-PLDILN 555
S S L+D + + + V+ +SV +V L+ + + P+D
Sbjct: 2026 SDSQLMDIARFCNRFPNIDLTYEVLDSDNVGAGEDVSV-HVSLERDLEGRIEVGPVDAPR 2084
Query: 556 -RKKEDGGWWLVI--LKLISWL-LSKG*LYRESPEXXXXXXXXXXXERKHTLYFMCDS 717
K ++ GWWLV+ K L + + L R+S ++ +TLYFMCDS
Sbjct: 2085 YPKSKEEGWWLVVGDTKTNQLLAIKRVALQRKSRVKLDFTAPAEPGKKTYTLYFMCDS 2142
>ref|XP_011070096.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Sesamum indicum] gi|747048192|ref|XP_011070097.1|
PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa
helicase-like [Sesamum indicum]
gi|747048194|ref|XP_011070098.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like [Sesamum
indicum]
Length = 2167
Score = 248 bits (634), Expect = 2e-72
Identities = 123/147 (83%), Positives = 134/147 (91%), Gaps = 4/147 (2%)
Frame = +3
Query: 276 KEVPGKSREN----IETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVL 443
KE+ + +EN IETVFDLVEMEDDERRELLQMSD QL+DIARFCNRFPNIDLTY+VL
Sbjct: 1992 KELAKRCQENRGKSIETVFDLVEMEDDERRELLQMSDLQLMDIARFCNRFPNIDLTYEVL 2051
Query: 444 DSDNVKAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKR 623
DSDNV+ GEDVSVHVSLERD EGRTEVGPVDAPRYPKSKE GWWLVVGDTKTNQL+AIKR
Sbjct: 2052 DSDNVRTGEDVSVHVSLERDLEGRTEVGPVDAPRYPKSKEEGWWLVVGDTKTNQLLAIKR 2111
Query: 624 VTLQRKSRVKLDFTAPTEPGKKTHSVF 704
V LQRKSRVKLDFTAP EPGKKT++++
Sbjct: 2112 VALQRKSRVKLDFTAPAEPGKKTYTLY 2138
Score = 175 bits (443), Expect = 1e-46
Identities = 115/237 (48%), Positives = 145/237 (61%), Gaps = 4/237 (1%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+PNVKANALL AHFSRQ IGGNLASDQQEVLIYA RLLQA+VDVISSNGWL+LALLAMEV
Sbjct: 1910 DPNVKANALLQAHFSRQTIGGNLASDQQEVLIYASRLLQAMVDVISSNGWLNLALLAMEV 1969
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTLRRSLILWRWRMMKGESSCKCQTH 378
SQMVTQG+WERDSMLLQLP FTKELAKRCQEN GK++ L M+ + +
Sbjct: 1970 SQMVTQGIWERDSMLLQLPHFTKELAKRCQENRGKSIETVFDLVE---MEDDERRELLQM 2026
Query: 379 S*SILLDFVIVSQTLI*LTMCWIVIMLKLEKMLVCMSVLNVILKEGQRWGLWMPLDILN- 555
S L+D + + + V+ + +SV + ++ + P+D
Sbjct: 2027 SDLQLMDIARFCNRFPNIDLTYEVLDSDNVRTGEDVSVHVSLERDLEGRTEVGPVDAPRY 2086
Query: 556 RKKEDGGWWLVI--LKLISWL-LSKG*LYRESPEXXXXXXXXXXXERKHTLYFMCDS 717
K ++ GWWLV+ K L + + L R+S ++ +TLYFMCDS
Sbjct: 2087 PKSKEEGWWLVVGDTKTNQLLAIKRVALQRKSRVKLDFTAPAEPGKKTYTLYFMCDS 2143
>ref|XP_006428571.1| hypothetical protein CICLE_v100108902mg, partial [Citrus
clementina] gi|557530628|gb|ESR41811.1| hypothetical
protein CICLE_v100108902mg, partial [Citrus clementina]
Length = 249
Score = 223 bits (567), Expect = 9e-70
Identities = 109/143 (76%), Positives = 128/143 (89%)
Frame = +3
Query: 276 KEVPGKSRENIETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVLDSDN 455
+E PGKS IETVFDLVEMEDDERRELLQMSD QL+DIARFCNRFPNID++++V DS+N
Sbjct: 85 QENPGKS---IETVFDLVEMEDDERRELLQMSDVQLLDIARFCNRFPNIDMSFEVQDSEN 141
Query: 456 VKAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKRVTLQ 635
V+AGED+++ V LERD EGRTEVGPV + RYPK+KE GWWLVVGDTKTNQL+AIKRV+LQ
Sbjct: 142 VRAGEDITLQVVLERDLEGRTEVGPVYSNRYPKAKEEGWWLVVGDTKTNQLLAIKRVSLQ 201
Query: 636 RKSRVKLDFTAPTEPGKKTHSVF 704
RKSRVKLDF AP E GKKT++++
Sbjct: 202 RKSRVKLDFAAPAEAGKKTYTLY 224
Score = 161 bits (407), Expect = 1e-45
Identities = 110/234 (47%), Positives = 137/234 (58%), Gaps = 6/234 (2%)
Frame = +1
Query: 34 ANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEVSQMVT 213
ANALL AHFSRQ +GGNL DQ+EVL+ A RLLQA+VDVISSNGWLSLALLAMEVSQMVT
Sbjct: 1 ANALLQAHFSRQQVGGNLKLDQEEVLLSASRLLQAMVDVISSNGWLSLALLAMEVSQMVT 60
Query: 214 QGMWERDSMLLQLPPFTKELAKRCQENPGKTLRRSLILWRWRMMKGESSCKCQTHS*SIL 393
QG+WERDSMLLQLP FTK+LAKRCQENPGK++ L M+ + + S L
Sbjct: 61 QGIWERDSMLLQLPHFTKDLAKRCQENPGKSIETVFDLVE---MEDDERRELLQMSDVQL 117
Query: 394 LDFVIVSQTLI*LTMCWIVIMLKLEKMLVCMSV-LNVILKEGQRWGLWMPLDILNR--KK 564
LD + M + V E + + L V+L+ + NR K
Sbjct: 118 LDIARFCNRFPNIDMSFEV--QDSENVRAGEDITLQVVLERDLEGRTEVGPVYSNRYPKA 175
Query: 565 EDGGWWLVI--LKLISWL-LSKG*LYRESPEXXXXXXXXXXXERKHTLYFMCDS 717
++ GWWLV+ K L + + L R+S ++ +TLYFMCDS
Sbjct: 176 KEEGWWLVVGDTKTNQLLAIKRVSLQRKSRVKLDFAAPAEAGKKTYTLYFMCDS 229
>emb|CDP11347.1| unnamed protein product [Coffea canephora]
Length = 220
Score = 217 bits (553), Expect = 5e-68
Identities = 105/143 (73%), Positives = 123/143 (86%)
Frame = +3
Query: 276 KEVPGKSRENIETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVLDSDN 455
+E PGKS IETVFDLVEMEDDERRELLQMS+SQL+DIARFCNRFPNIDL YDV D DN
Sbjct: 50 QENPGKS---IETVFDLVEMEDDERRELLQMSESQLLDIARFCNRFPNIDLAYDVPDRDN 106
Query: 456 VKAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKRVTLQ 635
V+AGE++ VHV+LERD EGR+E+GPVDAPRYP+ KE GWWLVVGD KT+QL+AIK VT Q
Sbjct: 107 VRAGENIKVHVTLERDLEGRSEIGPVDAPRYPQVKEEGWWLVVGDPKTDQLLAIKTVTFQ 166
Query: 636 RKSRVKLDFTAPTEPGKKTHSVF 704
RKS V+LDF AP E G++ + ++
Sbjct: 167 RKSTVRLDFDAPAEAGRRNYMLY 189
Score = 104 bits (260), Expect = 4e-24
Identities = 49/57 (85%), Positives = 56/57 (98%)
Frame = +1
Query: 139 VVDVISSNGWLSLALLAMEVSQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTL 309
+VDVISSNGWL+LALLAMEVSQMVTQGMWERDS+LLQLP FTKELA++CQENPGK++
Sbjct: 1 MVDVISSNGWLTLALLAMEVSQMVTQGMWERDSVLLQLPHFTKELAQKCQENPGKSI 57
>ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum tuberosum]
Length = 2174
Score = 231 bits (589), Expect = 3e-66
Identities = 115/147 (78%), Positives = 129/147 (87%), Gaps = 4/147 (2%)
Frame = +3
Query: 276 KEVPGKSREN----IETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVL 443
KE+ K +EN IETVFDLVEMEDDERRELLQMSD QL+DIARFCNRFPNIDLTYDVL
Sbjct: 2000 KELAKKCQENPGRSIETVFDLVEMEDDERRELLQMSDLQLLDIARFCNRFPNIDLTYDVL 2059
Query: 444 DSDNVKAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKR 623
DSDNV AG+DVSV V+LERD EGRTEVGPV APRYPK+KE GWWLVVGDTK+NQL+AIKR
Sbjct: 2060 DSDNVSAGDDVSVQVTLERDLEGRTEVGPVFAPRYPKTKEEGWWLVVGDTKSNQLLAIKR 2119
Query: 624 VTLQRKSRVKLDFTAPTEPGKKTHSVF 704
VTLQRKS+VKLDF AP E G + ++++
Sbjct: 2120 VTLQRKSKVKLDFAAPAEAGTRNYTLY 2146
Score = 172 bits (436), Expect = 1e-45
Identities = 112/237 (47%), Positives = 141/237 (59%), Gaps = 4/237 (1%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+P+VKANALL AHFSRQM+GGNLASDQQEVL+ A RLLQA+VDVISSNGWLSLALL MEV
Sbjct: 1918 DPHVKANALLQAHFSRQMVGGNLASDQQEVLLSATRLLQAMVDVISSNGWLSLALLTMEV 1977
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTLRRSLILWRWRMMKGESSCKCQTH 378
SQMVTQGMWERDSMLLQLP FTKELAK+CQENPG+++ L M+ + +
Sbjct: 1978 SQMVTQGMWERDSMLLQLPHFTKELAKKCQENPGRSIETVFDLVE---MEDDERRELLQM 2034
Query: 379 S*SILLDFVIVSQTLI*LTMCWIVIMLKLEKMLVCMSVLNVILKEGQ-RWGLWMPLDILN 555
S LLD + + + V+ +SV + ++ + R +
Sbjct: 2035 SDLQLLDIARFCNRFPNIDLTYDVLDSDNVSAGDDVSVQVTLERDLEGRTEVGPVFAPRY 2094
Query: 556 RKKEDGGWWLVILKLIS---WLLSKG*LYRESPEXXXXXXXXXXXERKHTLYFMCDS 717
K ++ GWWLV+ S + + L R+S R +TLYFMCDS
Sbjct: 2095 PKTKEEGWWLVVGDTKSNQLLAIKRVTLQRKSKVKLDFAAPAEAGTRNYTLYFMCDS 2151
>emb|CDP17811.1| unnamed protein product [Coffea canephora]
Length = 2120
Score = 230 bits (587), Expect = 5e-66
Identities = 114/143 (79%), Positives = 128/143 (89%)
Frame = +3
Query: 276 KEVPGKSRENIETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVLDSDN 455
+E PGKS IETVFDLVEMEDDERRELLQMSD QL+DIARFCNRFPNIDL YDV +SDN
Sbjct: 1949 QENPGKS---IETVFDLVEMEDDERRELLQMSDLQLMDIARFCNRFPNIDLAYDVPESDN 2005
Query: 456 VKAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKRVTLQ 635
V+AGE++SVHV+LERD EGR EVGPVDAPRYPK KE GWWLVVGDTKTNQL+AIKRVTLQ
Sbjct: 2006 VRAGENISVHVTLERDLEGRIEVGPVDAPRYPKVKEEGWWLVVGDTKTNQLLAIKRVTLQ 2065
Query: 636 RKSRVKLDFTAPTEPGKKTHSVF 704
RKS+V+LDF A E GKKT++++
Sbjct: 2066 RKSKVRLDFDASAEAGKKTYTLY 2088
Score = 168 bits (426), Expect = 3e-44
Identities = 82/97 (84%), Positives = 94/97 (96%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+P+VKANALL AHF+RQ++GGNLASDQ+EVLI+A RLLQA+VDVISS+GWLSLALLAMEV
Sbjct: 1860 DPHVKANALLQAHFARQLLGGNLASDQREVLIFASRLLQAMVDVISSSGWLSLALLAMEV 1919
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTL 309
SQMVTQGMWERDSMLLQLP FTKELAK+CQENPGK++
Sbjct: 1920 SQMVTQGMWERDSMLLQLPHFTKELAKKCQENPGKSI 1956
>gb|KVH95384.1| AAA+ ATPase domain-containing protein, partial [Cynara cardunculus
var. scolymus]
Length = 2105
Score = 229 bits (585), Expect = 9e-66
Identities = 113/144 (78%), Positives = 133/144 (92%), Gaps = 1/144 (0%)
Frame = +3
Query: 276 KEVPGKSRENIETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVLDSDN 455
+E PG+S IETVFDLVEMEDDERRELLQMSDSQL+DIA+FCNRFPNIDL+YDVLDSDN
Sbjct: 1938 QENPGRS---IETVFDLVEMEDDERRELLQMSDSQLMDIAKFCNRFPNIDLSYDVLDSDN 1994
Query: 456 VKAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKRVTLQ 635
++AG+D ++ V+LERD EGRTEVGPVDAPRYPK+KE GWWLVVGDTKTNQL+AIKRV+LQ
Sbjct: 1995 IRAGDDFTLLVTLERDLEGRTEVGPVDAPRYPKAKEEGWWLVVGDTKTNQLLAIKRVSLQ 2054
Query: 636 RKSRVKLD-FTAPTEPGKKTHSVF 704
RKS+VKLD TAP+EPGKK+ +++
Sbjct: 2055 RKSKVKLDNITAPSEPGKKSFTLY 2078
Score = 164 bits (416), Expect = 6e-43
Identities = 108/238 (45%), Positives = 145/238 (60%), Gaps = 5/238 (2%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+P+VKANAL+ AHFSRQ++GGNL SDQQEVL+ A RLLQA+VDVISS+GWLSLALLAMEV
Sbjct: 1849 DPHVKANALIQAHFSRQLVGGNLGSDQQEVLLSASRLLQAMVDVISSSGWLSLALLAMEV 1908
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTLRRSLILWRWRMMKGESSCKCQTH 378
SQMVTQGMWERDS LLQLP FTK+LAKRCQENPG+++ L M+ + +
Sbjct: 1909 SQMVTQGMWERDSNLLQLPHFTKDLAKRCQENPGRSIETVFDLVE---MEDDERRELLQM 1965
Query: 379 S*SILLDFVIVSQTLI*LTMCWIVIMLKLEKMLVCMSVLNVILKEGQRWGLWMPLDILN- 555
S S L+D + + + V+ + ++L + ++ + P+D
Sbjct: 1966 SDSQLMDIAKFCNRFPNIDLSYDVLDSDNIRAGDDFTLLVTLERDLEGRTEVGPVDAPRY 2025
Query: 556 RKKEDGGWWLVI--LKLISWL-LSKG*LYRESP-EXXXXXXXXXXXERKHTLYFMCDS 717
K ++ GWWLV+ K L + + L R+S + ++ TLYFMCDS
Sbjct: 2026 PKAKEEGWWLVVGDTKTNQLLAIKRVSLQRKSKVKLDNITAPSEPGKKSFTLYFMCDS 2083
>ref|XP_010270595.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Nelumbo nucifera] gi|720046748|ref|XP_010270596.1|
PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa
helicase-like [Nelumbo nucifera]
Length = 2177
Score = 229 bits (583), Expect = 2e-65
Identities = 109/143 (76%), Positives = 135/143 (94%)
Frame = +3
Query: 276 KEVPGKSRENIETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVLDSDN 455
+E PGKS IETVFDLVEMEDDERRELLQMSDSQL+DIARFCNRFPNID+TY+V++SD+
Sbjct: 2009 QENPGKS---IETVFDLVEMEDDERRELLQMSDSQLLDIARFCNRFPNIDMTYEVMESDS 2065
Query: 456 VKAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKRVTLQ 635
V+AG+DV++ V+LERD EGR+EVGPVDAPRYPK+KE GWWLVVGDTKTNQL+AIKRV+LQ
Sbjct: 2066 VRAGDDVTLLVTLERDLEGRSEVGPVDAPRYPKAKEEGWWLVVGDTKTNQLLAIKRVSLQ 2125
Query: 636 RKSRVKLDFTAPTEPGKKTHSVF 704
RKS+VKL+F+AP+E G+K+++++
Sbjct: 2126 RKSKVKLEFSAPSEAGRKSYTLY 2148
Score = 172 bits (437), Expect = 9e-46
Identities = 112/237 (47%), Positives = 144/237 (60%), Gaps = 4/237 (1%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+P+VKANALL AHFSR + GNLASDQ+EVL+ A RLLQA+VDVISSNGWLSLALLAMEV
Sbjct: 1920 DPHVKANALLQAHFSRHTVVGNLASDQREVLLSASRLLQAMVDVISSNGWLSLALLAMEV 1979
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTLRRSLILWRWRMMKGESSCKCQTH 378
SQMVTQGMWERDSMLLQLP FTKELAK+CQENPGK++ L M+ + +
Sbjct: 1980 SQMVTQGMWERDSMLLQLPHFTKELAKKCQENPGKSIETVFDLVE---MEDDERRELLQM 2036
Query: 379 S*SILLDFVIVSQTLI*LTMCWIVIMLKLEKMLVCMSVLNVILKEGQRWGLWMPLDILN- 555
S S LLD + M + V+ + +++L + ++ + P+D
Sbjct: 2037 SDSQLLDIARFCNRFPNIDMTYEVMESDSVRAGDDVTLLVTLERDLEGRSEVGPVDAPRY 2096
Query: 556 RKKEDGGWWLVI--LKLISWL-LSKG*LYRESPEXXXXXXXXXXXERKHTLYFMCDS 717
K ++ GWWLV+ K L + + L R+S + +TLYFMCDS
Sbjct: 2097 PKAKEEGWWLVVGDTKTNQLLAIKRVSLQRKSKVKLEFSAPSEAGRKSYTLYFMCDS 2153
>ref|XP_009606072.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Nicotiana tomentosiformis]
Length = 2189
Score = 228 bits (580), Expect = 4e-65
Identities = 112/143 (78%), Positives = 128/143 (89%)
Frame = +3
Query: 276 KEVPGKSRENIETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVLDSDN 455
+E PGKS +ETVFDLVE+EDDERRELLQMSD QL+DIARFCNRFPNIDLTY+VLDS N
Sbjct: 2019 QENPGKS---VETVFDLVELEDDERRELLQMSDLQLMDIARFCNRFPNIDLTYEVLDSGN 2075
Query: 456 VKAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKRVTLQ 635
V AG+DVSV V+LERD EGRTEVGPV AP+YPK+KE GWWLVVGDTK+NQL+AIKRVTLQ
Sbjct: 2076 VSAGDDVSVQVTLERDLEGRTEVGPVFAPKYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQ 2135
Query: 636 RKSRVKLDFTAPTEPGKKTHSVF 704
RKSRVKLDF AP E G +T++++
Sbjct: 2136 RKSRVKLDFAAPAEAGTRTYTLY 2158
Score = 167 bits (422), Expect = 9e-44
Identities = 81/97 (83%), Positives = 93/97 (95%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+P++KANALL AHFSRQ++GGNLASDQQEVL+ + RLLQA+VDVISSNGWLSLALLAMEV
Sbjct: 1930 DPHIKANALLQAHFSRQVLGGNLASDQQEVLLSSTRLLQAMVDVISSNGWLSLALLAMEV 1989
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTL 309
SQMVTQGMWERDSMLLQLP FTK+LAK+CQENPGK++
Sbjct: 1990 SQMVTQGMWERDSMLLQLPHFTKDLAKKCQENPGKSV 2026
>ref|XP_009787289.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Nicotiana sylvestris]
Length = 2181
Score = 227 bits (578), Expect = 8e-65
Identities = 112/143 (78%), Positives = 128/143 (89%)
Frame = +3
Query: 276 KEVPGKSRENIETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVLDSDN 455
+E PGKS +ETVFDLVE+EDDERRELLQMSD QL+DIARFCNRFPNIDLTY+VLDSDN
Sbjct: 2011 QENPGKS---VETVFDLVELEDDERRELLQMSDLQLMDIARFCNRFPNIDLTYEVLDSDN 2067
Query: 456 VKAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKRVTLQ 635
V AG+DVSV V+LERD EGRTEVGPV AP+YPK+KE GWWLVVGDTK+NQL+AIKRVTLQ
Sbjct: 2068 VSAGDDVSVQVTLERDLEGRTEVGPVFAPKYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQ 2127
Query: 636 RKSRVKLDFTAPTEPGKKTHSVF 704
RKSRVKLDF AP E +T++++
Sbjct: 2128 RKSRVKLDFAAPAEAVTRTYTLY 2150
Score = 167 bits (422), Expect = 9e-44
Identities = 81/97 (83%), Positives = 93/97 (95%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+P++KANALL AHFSRQ++GGNLASDQQEVL+ + RLLQA+VDVISSNGWLSLALLAMEV
Sbjct: 1922 DPHIKANALLQAHFSRQVLGGNLASDQQEVLLSSTRLLQAMVDVISSNGWLSLALLAMEV 1981
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTL 309
SQMVTQGMWERDSMLLQLP FTK+LAK+CQENPGK++
Sbjct: 1982 SQMVTQGMWERDSMLLQLPHFTKDLAKKCQENPGKSV 2018
>ref|XP_013403400.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Lingula anatina]
Length = 2136
Score = 162 bits (410), Expect(2) = 2e-64
Identities = 74/137 (54%), Positives = 112/137 (81%)
Frame = +3
Query: 300 ENIETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVLDSDNVKAGEDVS 479
+NI+TVFD++EMEDDER LL +S++++ D+ARFCNR+PNI++TY+V + DNVK+G V+
Sbjct: 1972 KNIDTVFDVMEMEDDERNTLLSLSETEMADVARFCNRYPNIEMTYEVEEKDNVKSGSPVN 2031
Query: 480 VHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKRVTLQRKSRVKLD 659
V V+LER+ E GPV AP +P+ +E GWW+V+GD K+N L++IKR+TLQ+K++VKLD
Sbjct: 2032 VAVTLEREDE---IAGPVVAPFFPQKREEGWWVVIGDPKSNSLISIKRLTLQQKAKVKLD 2088
Query: 660 FTAPTEPGKKTHSVFHV 710
F AP+ PGK ++ ++++
Sbjct: 2089 FVAPS-PGKHSYVLYYM 2104
Score = 112 bits (279), Expect(2) = 2e-64
Identities = 55/91 (60%), Positives = 67/91 (73%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+P+VK N LL AH SR + L SD +++L A RL+QA VDV+SSNGWLS AL AME+
Sbjct: 1881 DPHVKTNLLLQAHLSRMQLPAELQSDTEDILTKAIRLIQACVDVLSSNGWLSPALAAMEL 1940
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQE 291
+QMVTQ MW +DS L QLP FT E+ KRCQE
Sbjct: 1941 AQMVTQAMWGKDSYLKQLPHFTAEIIKRCQE 1971
>ref|XP_015079049.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum pennellii]
Length = 2174
Score = 225 bits (574), Expect = 3e-64
Identities = 112/147 (76%), Positives = 128/147 (87%), Gaps = 4/147 (2%)
Frame = +3
Query: 276 KEVPGKSREN----IETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVL 443
KE+ K +EN IETVFDLVEMED+ERRELLQMSD QL+DIARFCNRFPNIDLTY V+
Sbjct: 2000 KELAKKCQENPGRSIETVFDLVEMEDNERRELLQMSDLQLLDIARFCNRFPNIDLTYHVV 2059
Query: 444 DSDNVKAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKR 623
DSDNV AG+DVSV V+LERD EGRTEVGPV APRYPK+KE GWWLVVGDTK+NQL+AIKR
Sbjct: 2060 DSDNVSAGDDVSVQVTLERDLEGRTEVGPVFAPRYPKTKEEGWWLVVGDTKSNQLLAIKR 2119
Query: 624 VTLQRKSRVKLDFTAPTEPGKKTHSVF 704
VTLQRKS+VKLDF AP E G + ++++
Sbjct: 2120 VTLQRKSKVKLDFAAPAEAGTRNYTLY 2146
Score = 172 bits (435), Expect = 2e-45
Identities = 112/237 (47%), Positives = 140/237 (59%), Gaps = 4/237 (1%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+P+VKANALL AHFSRQM+GGNLASDQQEVL+ A RLLQA+VDVISSNGWLSLALL MEV
Sbjct: 1918 DPHVKANALLQAHFSRQMVGGNLASDQQEVLLSATRLLQAMVDVISSNGWLSLALLTMEV 1977
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTLRRSLILWRWRMMKGESSCKCQTH 378
SQMVTQGMWERDSMLLQLP FTKELAK+CQENPG+++ L M+ +
Sbjct: 1978 SQMVTQGMWERDSMLLQLPHFTKELAKKCQENPGRSIETVFDLVE---MEDNERRELLQM 2034
Query: 379 S*SILLDFVIVSQTLI*LTMCWIVIMLKLEKMLVCMSVLNVILKEGQ-RWGLWMPLDILN 555
S LLD + + + V+ +SV + ++ + R +
Sbjct: 2035 SDLQLLDIARFCNRFPNIDLTYHVVDSDNVSAGDDVSVQVTLERDLEGRTEVGPVFAPRY 2094
Query: 556 RKKEDGGWWLVILKLIS---WLLSKG*LYRESPEXXXXXXXXXXXERKHTLYFMCDS 717
K ++ GWWLV+ S + + L R+S R +TLYFMCDS
Sbjct: 2095 PKTKEEGWWLVVGDTKSNQLLAIKRVTLQRKSKVKLDFAAPAEAGTRNYTLYFMCDS 2151
>ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
[Solanum lycopersicum]
Length = 2174
Score = 225 bits (574), Expect = 3e-64
Identities = 112/147 (76%), Positives = 128/147 (87%), Gaps = 4/147 (2%)
Frame = +3
Query: 276 KEVPGKSREN----IETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVL 443
KE+ K +EN IETVFDLVEMED+ERRELLQMSD QL+DIARFCNRFPNIDLTY V+
Sbjct: 2000 KELAKKCQENPGRSIETVFDLVEMEDNERRELLQMSDLQLLDIARFCNRFPNIDLTYHVV 2059
Query: 444 DSDNVKAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKR 623
DSDNV AG+DVSV V+LERD EGRTEVGPV APRYPK+KE GWWLVVGDTK+NQL+AIKR
Sbjct: 2060 DSDNVSAGDDVSVQVTLERDLEGRTEVGPVFAPRYPKTKEEGWWLVVGDTKSNQLLAIKR 2119
Query: 624 VTLQRKSRVKLDFTAPTEPGKKTHSVF 704
VTLQRKS+VKLDF AP E G + ++++
Sbjct: 2120 VTLQRKSKVKLDFAAPAEAGMRNYTLY 2146
Score = 171 bits (434), Expect = 2e-45
Identities = 112/237 (47%), Positives = 140/237 (59%), Gaps = 4/237 (1%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+P+VKANALL AHFSRQM+GGNLASDQQEVL+ A RLLQA+VDVISSNGWLSLALL MEV
Sbjct: 1918 DPHVKANALLQAHFSRQMVGGNLASDQQEVLLSATRLLQAMVDVISSNGWLSLALLTMEV 1977
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTLRRSLILWRWRMMKGESSCKCQTH 378
SQMVTQGMWERDSMLLQLP FTKELAK+CQENPG+++ L M+ +
Sbjct: 1978 SQMVTQGMWERDSMLLQLPHFTKELAKKCQENPGRSIETVFDLVE---MEDNERRELLQM 2034
Query: 379 S*SILLDFVIVSQTLI*LTMCWIVIMLKLEKMLVCMSVLNVILKEGQ-RWGLWMPLDILN 555
S LLD + + + V+ +SV + ++ + R +
Sbjct: 2035 SDLQLLDIARFCNRFPNIDLTYHVVDSDNVSAGDDVSVQVTLERDLEGRTEVGPVFAPRY 2094
Query: 556 RKKEDGGWWLVILKLIS---WLLSKG*LYRESPEXXXXXXXXXXXERKHTLYFMCDS 717
K ++ GWWLV+ S + + L R+S R +TLYFMCDS
Sbjct: 2095 PKTKEEGWWLVVGDTKSNQLLAIKRVTLQRKSKVKLDFAAPAEAGMRNYTLYFMCDS 2151
>ref|XP_010537248.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
[Tarenaya hassleriana]
Length = 2167
Score = 225 bits (574), Expect = 3e-64
Identities = 109/143 (76%), Positives = 129/143 (90%)
Frame = +3
Query: 276 KEVPGKSRENIETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVLDSDN 455
+E PGKS +ETVFDLVEMEDDERRELLQMSDSQL+DIARFCNRFPNIDLTY+V+DS+
Sbjct: 2002 QENPGKS---VETVFDLVEMEDDERRELLQMSDSQLLDIARFCNRFPNIDLTYEVVDSEG 2058
Query: 456 VKAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKRVTLQ 635
V G +V++ V+LERD EGR+EVGPVDA RYPK+KE GWWLVVGDT TNQL+AIKRV+LQ
Sbjct: 2059 VTPGREVTLQVTLERDMEGRSEVGPVDAGRYPKTKEEGWWLVVGDTNTNQLLAIKRVSLQ 2118
Query: 636 RKSRVKLDFTAPTEPGKKTHSVF 704
RK+RVKLDFTAPTEPG K+++++
Sbjct: 2119 RKARVKLDFTAPTEPGDKSYTLY 2141
Score = 169 bits (428), Expect = 1e-44
Identities = 113/241 (46%), Positives = 145/241 (60%), Gaps = 8/241 (3%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+P+VKANALL AHFSRQ IGGNLA DQ+EVL+ A RLLQA+VDVISSNGWL+LALLAMEV
Sbjct: 1913 DPHVKANALLQAHFSRQNIGGNLAMDQREVLLSATRLLQAMVDVISSNGWLNLALLAMEV 1972
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTLRRSLILWRWRMMKGESSCKCQTH 378
SQMVTQGMWERDSMLLQLP FTK+LAKRCQENPGK++ L M+ + +
Sbjct: 1973 SQMVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKSVETVFDLVE---MEDDERRELLQM 2029
Query: 379 S*SILLDFVIVSQTLI*LTMCWIVIMLKLEKMLVCMSVLNVILKEGQRWGLWM--PLDI- 549
S S LLD + + + V+ E + V + E G P+D
Sbjct: 2030 SDSQLLDIARFCNRFPNIDLTYEVV--DSEGVTPGREVTLQVTLERDMEGRSEVGPVDAG 2087
Query: 550 LNRKKEDGGWWLVI-----LKLISWLLSKG*LYRESPEXXXXXXXXXXXERKHTLYFMCD 714
K ++ GWWLV+ +L++ + + L R++ ++ +TLYFMCD
Sbjct: 2088 RYPKTKEEGWWLVVGDTNTNQLLA--IKRVSLQRKARVKLDFTAPTEPGDKSYTLYFMCD 2145
Query: 715 S 717
S
Sbjct: 2146 S 2146
>ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
gi|222869248|gb|EEF06379.1| U5 small nuclear
ribonucleoprotein helicase [Populus trichocarpa]
Length = 2157
Score = 225 bits (574), Expect = 3e-64
Identities = 106/143 (74%), Positives = 131/143 (91%)
Frame = +3
Query: 276 KEVPGKSRENIETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVLDSDN 455
+E PGKS IETVFDLVEMEDDERRELLQMSDSQL+DI RFCNRFPNID++Y+V+D DN
Sbjct: 1986 QENPGKS---IETVFDLVEMEDDERRELLQMSDSQLLDIVRFCNRFPNIDMSYEVMDGDN 2042
Query: 456 VKAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKRVTLQ 635
V+AGED+++ V+LERD EGRTEVGPVD+PRYPK+KE GWWLVVGDTK+NQL+AIKRV+LQ
Sbjct: 2043 VRAGEDITLLVTLERDLEGRTEVGPVDSPRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQ 2102
Query: 636 RKSRVKLDFTAPTEPGKKTHSVF 704
RKS+VKL+F AP + G+K+++++
Sbjct: 2103 RKSKVKLEFAAPADTGRKSYTLY 2125
Score = 172 bits (436), Expect = 1e-45
Identities = 112/240 (46%), Positives = 143/240 (59%), Gaps = 7/240 (2%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+P+VKAN LL AHFSRQ +GGNLA DQ+EVL+ RLLQA+VDVISSNGWLSLALLAMEV
Sbjct: 1897 DPHVKANVLLQAHFSRQSVGGNLALDQREVLLSGSRLLQAMVDVISSNGWLSLALLAMEV 1956
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTLRRSLILWRWRMMKGESSCKCQTH 378
SQMVTQGMWERDSMLLQLP FTK++AKRCQENPGK++ L M+ + +
Sbjct: 1957 SQMVTQGMWERDSMLLQLPHFTKDMAKRCQENPGKSIETVFDLVE---MEDDERRELLQM 2013
Query: 379 S*SILLDFVIVSQTLI*LTMCWIVI---MLKLEKMLVCMSVLNVILKEGQRWGLWMPLDI 549
S S LLD V + M + V+ ++ + + + L L+ G P+D
Sbjct: 2014 SDSQLLDIVRFCNRFPNIDMSYEVMDGDNVRAGEDITLLVTLERDLEGRTEVG---PVDS 2070
Query: 550 LN-RKKEDGGWWLVILKLIS---WLLSKG*LYRESPEXXXXXXXXXXXERKHTLYFMCDS 717
K ++ GWWLV+ S + + L R+S + +TLYFMCDS
Sbjct: 2071 PRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKVKLEFAAPADTGRKSYTLYFMCDS 2130
>ref|XP_010670756.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Beta vulgaris subsp. vulgaris]
Length = 2175
Score = 225 bits (573), Expect = 4e-64
Identities = 109/149 (73%), Positives = 134/149 (89%), Gaps = 4/149 (2%)
Frame = +3
Query: 276 KEVPGKSREN----IETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVL 443
KE+ + +EN IETVFDLVEMED+ERRELLQMSDSQL+DIARFCNRFPNID+TY+V+
Sbjct: 1997 KELAKRCQENPDKPIETVFDLVEMEDNERRELLQMSDSQLLDIARFCNRFPNIDMTYEVV 2056
Query: 444 DSDNVKAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKR 623
+SDN+ AG+DV++ V+LERD EGR+EVGPVDA RYPK+KE GWWLVVGDTK+NQL+AIKR
Sbjct: 2057 ESDNIGAGDDVTLVVTLERDLEGRSEVGPVDALRYPKAKEEGWWLVVGDTKSNQLLAIKR 2116
Query: 624 VTLQRKSRVKLDFTAPTEPGKKTHSVFHV 710
VTLQRKS+VKLDF AP E GKKT++++++
Sbjct: 2117 VTLQRKSKVKLDFVAPAEVGKKTYTLYYM 2145
Score = 167 bits (423), Expect = 6e-44
Identities = 111/239 (46%), Positives = 141/239 (58%), Gaps = 6/239 (2%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+P+VKAN LL AHFSR +GGNLA+DQ+EVL+ A RLLQA+VDVISSNGWL+LALLAMEV
Sbjct: 1915 DPHVKANVLLQAHFSRHPLGGNLAADQREVLLSASRLLQAMVDVISSNGWLNLALLAMEV 1974
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTLRRSLILWRWRMMKGESSCKCQTH 378
SQMVTQGMWERDSMLLQLP F+KELAKRCQENP K + L M+ +
Sbjct: 1975 SQMVTQGMWERDSMLLQLPHFSKELAKRCQENPDKPIETVFDLVE---MEDNERRELLQM 2031
Query: 379 S*SILLDFVIVSQTLI*LTMCWIVIMLKLEKMLVCMSVLNVILKEGQRWGLWM--PLDIL 552
S S LLD + M + V+ + + + V V+ E G P+D L
Sbjct: 2032 SDSQLLDIARFCNRFPNIDMTYEVV--ESDNIGAGDDVTLVVTLERDLEGRSEVGPVDAL 2089
Query: 553 N-RKKEDGGWWLVILKLIS---WLLSKG*LYRESPEXXXXXXXXXXXERKHTLYFMCDS 717
K ++ GWWLV+ S + + L R+S ++ +TLY+MCDS
Sbjct: 2090 RYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSKVKLDFVAPAEVGKKTYTLYYMCDS 2148
>ref|XP_010061242.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Eucalyptus grandis] gi|629102690|gb|KCW68159.1|
hypothetical protein EUGRSUZ_F01825 [Eucalyptus grandis]
Length = 2173
Score = 225 bits (573), Expect = 4e-64
Identities = 108/142 (76%), Positives = 131/142 (92%)
Frame = +3
Query: 279 EVPGKSRENIETVFDLVEMEDDERRELLQMSDSQLIDIARFCNRFPNIDLTYDVLDSDNV 458
E PGKS +ETVFDL+EMED ER+ELLQMSDSQL+DIARFCNRFPNIDLTY+VL++++V
Sbjct: 2008 ENPGKS---VETVFDLLEMEDGERQELLQMSDSQLLDIARFCNRFPNIDLTYEVLNNESV 2064
Query: 459 KAGEDVSVHVSLERDFEGRTEVGPVDAPRYPKSKEGGWWLVVGDTKTNQLVAIKRVTLQR 638
AG+D+++ V LERD EGRTEVGPVDAPRYPK+KE GWWLVVGDTKTNQL+AIKRV+LQR
Sbjct: 2065 SAGDDMTLQVMLERDMEGRTEVGPVDAPRYPKAKEEGWWLVVGDTKTNQLLAIKRVSLQR 2124
Query: 639 KSRVKLDFTAPTEPGKKTHSVF 704
KS+VKL+F+AP+E GKKT+S++
Sbjct: 2125 KSKVKLEFSAPSEAGKKTYSLY 2146
Score = 166 bits (420), Expect = 2e-43
Identities = 111/237 (46%), Positives = 145/237 (61%), Gaps = 4/237 (1%)
Frame = +1
Query: 19 NPNVKANALLHAHFSRQMIGGNLASDQQEVLIYACRLLQAVVDVISSNGWLSLALLAMEV 198
+P+VKANALL AHFSRQ +GGNLA DQ+EVL+ A RLLQA+VDVISS+GWLSLALLAMEV
Sbjct: 1918 DPHVKANALLQAHFSRQPVGGNLALDQREVLLSASRLLQAMVDVISSSGWLSLALLAMEV 1977
Query: 199 SQMVTQGMWERDSMLLQLPPFTKELAKRCQENPGKTLRRSLILWRWRMMKGESSCKCQTH 378
SQMVTQGMWERDSMLLQLP FTK+LAK+C ENPGK++ L M GE Q
Sbjct: 1978 SQMVTQGMWERDSMLLQLPHFTKDLAKKCLENPGKSVETVFDL--LEMEDGERQELLQM- 2034
Query: 379 S*SILLDFVIVSQTLI*LTMCWIVIMLKLEKMLVCMSVLNVILKEGQRWGLWMPLDILN- 555
S S LLD + + + V+ + M++ ++ ++ + P+D
Sbjct: 2035 SDSQLLDIARFCNRFPNIDLTYEVLNNESVSAGDDMTLQVMLERDMEGRTEVGPVDAPRY 2094
Query: 556 RKKEDGGWWLVI--LKLISWL-LSKG*LYRESPEXXXXXXXXXXXERKHTLYFMCDS 717
K ++ GWWLV+ K L + + L R+S ++ ++LYFMCDS
Sbjct: 2095 PKAKEEGWWLVVGDTKTNQLLAIKRVSLQRKSKVKLEFSAPSEAGKKTYSLYFMCDS 2151