BLASTX nr result
ID: Rehmannia27_contig00019581
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00019581
(666 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011076392.1| PREDICTED: DNA-directed RNA polymerase III s... 204 3e-61
ref|XP_012852318.1| PREDICTED: uncharacterized protein LOC105971... 186 1e-54
ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260... 182 6e-53
emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera] 176 2e-50
emb|CDP05351.1| unnamed protein product [Coffea canephora] 172 7e-49
ref|XP_010656128.1| PREDICTED: uncharacterized protein LOC100256... 170 1e-48
ref|XP_011094009.1| PREDICTED: DNA-directed RNA polymerase III s... 169 2e-48
ref|XP_008234419.1| PREDICTED: uncharacterized protein LOC103333... 169 5e-48
ref|XP_009784284.1| PREDICTED: DNA-directed RNA polymerase III s... 168 2e-47
ref|XP_009784283.1| PREDICTED: DNA-directed RNA polymerase III s... 168 2e-47
ref|XP_010321476.1| PREDICTED: DNA-directed RNA polymerase III s... 169 2e-47
ref|XP_015074519.1| PREDICTED: DNA-directed RNA polymerase III s... 166 2e-46
ref|XP_009370450.1| PREDICTED: uncharacterized protein LOC103959... 164 3e-46
ref|XP_008234418.1| PREDICTED: uncharacterized protein LOC103333... 164 3e-46
ref|XP_008376400.1| PREDICTED: DNA-directed RNA polymerase III s... 164 4e-46
gb|KYP67913.1| DNA-directed RNA polymerase III subunit RPC4, par... 164 4e-46
ref|XP_006355616.1| PREDICTED: DNA-directed RNA polymerase III s... 165 5e-46
ref|XP_015167910.1| PREDICTED: DNA-directed RNA polymerase III s... 165 5e-46
ref|XP_009773975.1| PREDICTED: DNA-directed RNA polymerase III s... 160 5e-46
ref|XP_015581085.1| PREDICTED: DNA-directed RNA polymerase III s... 161 7e-46
>ref|XP_011076392.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like
[Sesamum indicum] gi|747059973|ref|XP_011076393.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc4-like [Sesamum indicum]
gi|747059975|ref|XP_011076394.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc4-like [Sesamum indicum]
Length = 366
Score = 204 bits (519), Expect = 3e-61
Identities = 118/219 (53%), Positives = 145/219 (66%), Gaps = 25/219 (11%)
Frame = -2
Query: 665 DY-NSYYPTTIPFRRPNSGDPEELDKAEFEEAPEYDENSLLSAPELGLLDQDDNTRMLFF 489
DY +SYYPTT+P+RRP SGDPE+LDK EFEEA EYDEN+L SA +LGLL QDD RMLFF
Sbjct: 149 DYKHSYYPTTLPWRRPYSGDPEKLDKEEFEEASEYDENNLSSASDLGLLGQDDTQRMLFF 208
Query: 488 KFPSILP-GYKSTPP-----------------SETSKGKEIADSSSRAS------KGKEI 381
+FP LP G + T S SKGKEI R S KGK+I
Sbjct: 209 QFPPNLPLGRRQTGTNKRDTANDLKALECGVFSAASKGKEIVGCGPRVSGISMGTKGKDI 268
Query: 380 SESSENRASGDPSKTSESSKISGLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCAC 201
+ +S N SG PS +K LE+LP+GY+GKMLVYKSG VKLKLGD+L DVSPG C
Sbjct: 269 APNSINLVSGHPS-----NKGCSLEELPEGYMGKMLVYKSGAVKLKLGDILYDVSPGSDC 323
Query: 200 IVSRHVMAMNTDDRHCSYLGDVNQRAVVTPEVDSLLDMI 84
++ VMA++T +R C LG +N+RAVVTP++D L+D +
Sbjct: 324 TFAQSVMAIDTTNRDCCDLGALNKRAVVTPDIDFLVDNV 362
>ref|XP_012852318.1| PREDICTED: uncharacterized protein LOC105971930 [Erythranthe
guttata] gi|604305879|gb|EYU24936.1| hypothetical
protein MIMGU_mgv1a009918mg [Erythranthe guttata]
Length = 327
Score = 186 bits (472), Expect = 1e-54
Identities = 111/193 (57%), Positives = 134/193 (69%), Gaps = 2/193 (1%)
Frame = -2
Query: 665 DY-NSYYPTTIPFRRPNSGDPEELDKAEFEEAPEYDENSLLSAPELGLLDQDDNT-RMLF 492
DY NSYYPTT+P RRP SG+PE LD +EFE+A EYDE+SL SA LGLLD+D NT +MLF
Sbjct: 143 DYENSYYPTTLPLRRPYSGNPELLDNSEFEDAVEYDEDSLSSASGLGLLDEDANTPKMLF 202
Query: 491 FKFPSILPGYKSTPPSETSKGKEIADSSSRASKGKEISESSENRASGDPSKTSESSKISG 312
F+FPS LP T SKGKEIA ++SR I +S N P K S
Sbjct: 203 FQFPSNLP----TGKRAASKGKEIAGTNSR------ILATSIN-----PPKEG-----SR 242
Query: 311 LEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCACIVSRHVMAMNTDDRHCSYLGDVN 132
LE+LP GY+GKMLVYKSG VKLKLG VL DVSPG C+ S+ V+A+NT D C +G+VN
Sbjct: 243 LEELPDGYMGKMLVYKSGAVKLKLGGVLYDVSPGSDCMFSQSVVAVNTTDGSCCEVGEVN 302
Query: 131 QRAVVTPEVDSLL 93
+RA+VTP++ SLL
Sbjct: 303 KRAIVTPDIGSLL 315
>ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260717 [Vitis vinifera]
gi|297745083|emb|CBI38675.3| unnamed protein product
[Vitis vinifera]
Length = 348
Score = 182 bits (462), Expect = 6e-53
Identities = 103/202 (50%), Positives = 140/202 (69%), Gaps = 10/202 (4%)
Frame = -2
Query: 665 DY-NSYYPTTIPFRRPNSGDPEELDKAEFEEAP---EYDENSLLSAPELGLLDQDDNTRM 498
DY +SYYPTT+P R+P+SGDPE LD+AEF EA EYDE ++ A ELGLL++ + RM
Sbjct: 149 DYVHSYYPTTLPLRKPHSGDPEILDEAEFGEASTNLEYDEKTINPASELGLLEESEKGRM 208
Query: 497 LFFKFPSILPGYKSTPPSETSKGKEIADSSSR------ASKGKEISESSENRASGDPSKT 336
F+ P+ LP +K +P ++KGKEI ++S+ ++KGK+++ SS S T
Sbjct: 209 FLFQLPANLPLFKQSP---SAKGKEIVENSTSLEGIYASAKGKQVARSS---LSSKSIGT 262
Query: 335 SESSKISGLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCACIVSRHVMAMNTDDRH 156
SE S LEDL G+IGKMLVYKSG +KLKLG++L DVSPG C + V+A+NT D+H
Sbjct: 263 SEHS--CRLEDLAGGHIGKMLVYKSGAIKLKLGEILYDVSPGLDCTCVQDVVAINTVDKH 320
Query: 155 CSYLGDVNQRAVVTPEVDSLLD 90
C LG++ +R +VTP+VDSLLD
Sbjct: 321 CYALGELGKRVIVTPDVDSLLD 342
>emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]
Length = 348
Score = 176 bits (445), Expect = 2e-50
Identities = 102/202 (50%), Positives = 136/202 (67%), Gaps = 10/202 (4%)
Frame = -2
Query: 665 DY-NSYYPTTIPFRRPNSGDPEELDKAEFEEAP---EYDENSLLSAPELGLLDQDDNTRM 498
DY +SYYPTT+P R+P+SGDPE LD+AEF EA EYDE ++ A ELGLL++ + RM
Sbjct: 149 DYVHSYYPTTLPLRKPHSGDPEILDEAEFGEASTNLEYDEKTINPASELGLLEESEKGRM 208
Query: 497 LFFKFPSILPGYKSTPPSETSKGKEIADSSSR------ASKGKEISESSENRASGDPSKT 336
F+ P+ LP K S ++KGKEI +S+ ++KGK+++ SS S T
Sbjct: 209 FLFQLPANLPLVKQ---SASAKGKEIVGNSTSLEGIYASAKGKQVARSS---LSSKSIGT 262
Query: 335 SESSKISGLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCACIVSRHVMAMNTDDRH 156
SE S LEDL G+ GKMLVYKSG +KLKLG++L DVSPG C + V+A+NT D+H
Sbjct: 263 SEHS--CRLEDLAGGHXGKMLVYKSGAIKLKLGEILYDVSPGLDCTCVQDVVAINTVDKH 320
Query: 155 CSYLGDVNQRAVVTPEVDSLLD 90
C LG++ +R +VTP+VDSLLD
Sbjct: 321 CYALGELGKRVIVTPDVDSLLD 342
>emb|CDP05351.1| unnamed protein product [Coffea canephora]
Length = 380
Score = 172 bits (437), Expect = 7e-49
Identities = 105/228 (46%), Positives = 137/228 (60%), Gaps = 37/228 (16%)
Frame = -2
Query: 665 DYN-SYYPTTIPFRRPNSGDPEELDKAEFEEAP---EYDENSLLSAPELGLLDQDDNTRM 498
DYN SYYP +P RRP SGDPE LD+ EF EA EYDE+++ SA +LGLL++ D +M
Sbjct: 152 DYNHSYYPVALPIRRPYSGDPEVLDREEFGEAKAASEYDESAIHSASDLGLLEEVDGEKM 211
Query: 497 LFFKFPSILPGYK------STPPSE------------------------TSKGKEIADSS 408
LF +FP+ LP K ST SE T+KGKEI S
Sbjct: 212 LFLQFPANLPFVKRESGPGSTGTSEHASASVNHKHRAGSSRPGGSVAPTTAKGKEIPGSF 271
Query: 407 SRAS---KGKEISESSENRASGDPSKTSESSKISGLEDLPKGYIGKMLVYKSGDVKLKLG 237
S KGKEI SS + G + + LE+LP G++GK+LV+KSG VKLKLG
Sbjct: 272 PMVSGDAKGKEIVNSSVSSVVGT------NKNVCSLEELPPGFMGKILVFKSGAVKLKLG 325
Query: 236 DVLCDVSPGCACIVSRHVMAMNTDDRHCSYLGDVNQRAVVTPEVDSLL 93
D+L DVSPG C ++ ++A+NT D+HC LG+V++RAVVTP++D LL
Sbjct: 326 DMLYDVSPGSNCTFAQDIVAINTSDKHCCNLGEVSKRAVVTPDIDHLL 373
>ref|XP_010656128.1| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
Length = 315
Score = 170 bits (430), Expect = 1e-48
Identities = 92/194 (47%), Positives = 122/194 (62%), Gaps = 3/194 (1%)
Frame = -2
Query: 665 DYNSYYPTTIPFRRPNSGDPEELDKAEFEEAPE---YDENSLLSAPELGLLDQDDNTRML 495
DY +YYP T+P RRP SG+PE LD+ EF EA E YDENS A ELGL+D++ ML
Sbjct: 124 DYYTYYPVTLPLRRPYSGNPELLDEEEFGEASESTAYDENSTNPAMELGLMDENQEASML 183
Query: 494 FFKFPSILPGYKSTPPSETSKGKEIADSSSRASKGKEISESSENRASGDPSKTSESSKIS 315
F + P+ +P K +E KE A SS + + + +G KT
Sbjct: 184 FLQLPATMPMIKQAATAEV---KENASSSKPPEDAGQANRLKPSEGAGSIQKTCR----- 235
Query: 314 GLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCACIVSRHVMAMNTDDRHCSYLGDV 135
LE+LP G++GKMLVYKSG +KLKLGD L DVSPG C+ ++ V+A+NT+D+ C LG++
Sbjct: 236 -LEELPSGFMGKMLVYKSGAIKLKLGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVLGEL 294
Query: 134 NQRAVVTPEVDSLL 93
+RAVVTP+VDS L
Sbjct: 295 KKRAVVTPDVDSAL 308
>ref|XP_011094009.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Sesamum
indicum]
Length = 299
Score = 169 bits (428), Expect = 2e-48
Identities = 91/197 (46%), Positives = 124/197 (62%), Gaps = 3/197 (1%)
Frame = -2
Query: 665 DYNSYYPTTIPFRRPNSGDPEELDKAEFEEAPE---YDENSLLSAPELGLLDQDDNTRML 495
DY +YYPTT+P RRP SG+PE LD+ EF E P+ YDE++ SA ELGLLD++ +
Sbjct: 121 DYYTYYPTTLPLRRPYSGNPELLDEEEFAEDPQNSTYDESAENSALELGLLDENMEETIF 180
Query: 494 FFKFPSILPGYKSTPPSETSKGKEIADSSSRASKGKEISESSENRASGDPSKTSESSKIS 315
F + PSILP K + +E + AD + KG E S+ K
Sbjct: 181 FLQLPSILPTTKQSTNAEVPE----ADKKANPGKGAEASQ-----------------KPC 219
Query: 314 GLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCACIVSRHVMAMNTDDRHCSYLGDV 135
LEDLP G +GKMLVY+SG +KLKLGD L DVS G C+ + V+A+NTDD+HC +G++
Sbjct: 220 RLEDLPAGLMGKMLVYRSGAIKLKLGDTLYDVSAGLNCVFGQDVVAINTDDKHCCNMGEI 279
Query: 134 NQRAVVTPEVDSLLDMI 84
++RA++TP+ DS+LD I
Sbjct: 280 SKRAIITPDTDSMLDAI 296
>ref|XP_008234419.1| PREDICTED: uncharacterized protein LOC103333371 isoform X2 [Prunus
mume]
Length = 324
Score = 169 bits (427), Expect = 5e-48
Identities = 94/193 (48%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Frame = -2
Query: 656 SYYPTTIPFRRPNSGDPEELDKAEFEE--APEYDENSLLSAPELGLLDQDDNTRMLFFKF 483
+YYPTT+P R+PNSGDPE L+ EF E EYDE+++ A ELGLL++ RMLF +
Sbjct: 150 TYYPTTLPLRKPNSGDPEVLNVNEFGEDAEKEYDESTINHAAELGLLEEKAEARMLFVQL 209
Query: 482 PSILPGYKSTPPSETSKGKEIADSSSRASKGKEISESSENRASGDPSKTSESSKISGLED 303
P+ILP T S T+KGKE ++ S+ ++G P K LE+
Sbjct: 210 PTILP---LTKRSATAKGKE------------KVGSSTSLESTGAPKKGCS------LEE 248
Query: 302 LPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCACIVSRHVMAMNTDDRHCSYLGDVNQRA 123
LP GY+GKMLVYKSG +KLKLG+ LCDVSPG CI V +NT+++ C LG ++ RA
Sbjct: 249 LPGGYMGKMLVYKSGAIKLKLGNTLCDVSPGSDCICDEDVAVINTEEKTCCVLGGISHRA 308
Query: 122 VVTPEVDSLLDMI 84
VVTP VDSLL++I
Sbjct: 309 VVTPNVDSLLNVI 321
>ref|XP_009784284.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X2 [Nicotiana sylvestris]
Length = 355
Score = 168 bits (426), Expect = 2e-47
Identities = 98/204 (48%), Positives = 135/204 (66%), Gaps = 13/204 (6%)
Frame = -2
Query: 662 YNSYYPTTIPFRRPNSGDPEELDKAEFEEAP---EYDENSLLSAPELGLLDQDDNTRMLF 492
+++ YP T+P RRP +GDPE LD+AEF +A EYDEN++ A ELGLL++ D+ ++LF
Sbjct: 153 HHTNYPITLPLRRPYAGDPEILDEAEFGKAAANAEYDENNIHPASELGLLEKKDDVQILF 212
Query: 491 FKFPSILP----GYKSTP---PSETSKGKEIADSSSR---ASKGKEISESSENRASGDPS 342
+ P LP G + T PS KGKE A ++ R ++KGKEI +SS + +
Sbjct: 213 LQLPVNLPLATKGGRDTAGCLPSPMLKGKEAAGTAPRLLASAKGKEIVDSSTISRRHNTA 272
Query: 341 KTSESSKISGLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCACIVSRHVMAMNTDD 162
K + LE LP G +GKMLVYKSG +KLKLGD+L DVSPG C S+ V+A+NT +
Sbjct: 273 KEA-----CNLEKLPAGNMGKMLVYKSGAIKLKLGDILYDVSPGVDCSFSQDVVAINTVE 327
Query: 161 RHCSYLGDVNQRAVVTPEVDSLLD 90
+HC LG++ +RAVVTP+VD LL+
Sbjct: 328 KHCCQLGEIGKRAVVTPDVDFLLN 351
>ref|XP_009784283.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X1 [Nicotiana sylvestris]
Length = 356
Score = 168 bits (426), Expect = 2e-47
Identities = 98/204 (48%), Positives = 135/204 (66%), Gaps = 13/204 (6%)
Frame = -2
Query: 662 YNSYYPTTIPFRRPNSGDPEELDKAEFEEAP---EYDENSLLSAPELGLLDQDDNTRMLF 492
+++ YP T+P RRP +GDPE LD+AEF +A EYDEN++ A ELGLL++ D+ ++LF
Sbjct: 154 HHTNYPITLPLRRPYAGDPEILDEAEFGKAAANAEYDENNIHPASELGLLEKKDDVQILF 213
Query: 491 FKFPSILP----GYKSTP---PSETSKGKEIADSSSR---ASKGKEISESSENRASGDPS 342
+ P LP G + T PS KGKE A ++ R ++KGKEI +SS + +
Sbjct: 214 LQLPVNLPLATKGGRDTAGCLPSPMLKGKEAAGTAPRLLASAKGKEIVDSSTISRRHNTA 273
Query: 341 KTSESSKISGLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCACIVSRHVMAMNTDD 162
K + LE LP G +GKMLVYKSG +KLKLGD+L DVSPG C S+ V+A+NT +
Sbjct: 274 KEA-----CNLEKLPAGNMGKMLVYKSGAIKLKLGDILYDVSPGVDCSFSQDVVAINTVE 328
Query: 161 RHCSYLGDVNQRAVVTPEVDSLLD 90
+HC LG++ +RAVVTP+VD LL+
Sbjct: 329 KHCCQLGEIGKRAVVTPDVDFLLN 352
>ref|XP_010321476.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Solanum
lycopersicum]
Length = 371
Score = 169 bits (427), Expect = 2e-47
Identities = 100/221 (45%), Positives = 140/221 (63%), Gaps = 30/221 (13%)
Frame = -2
Query: 662 YNSYYPTTIPFRRPNSGDPEELDKAEFEEAP---EYDENSLLSAPELGLLDQDDNTRMLF 492
++S YP T+P RRP +GDPE L++AEF EA EYDEN++ A ELGLL++ D+ ++LF
Sbjct: 152 HHSNYPVTLPLRRPYAGDPEILNEAEFGEAAKNAEYDENNINPASELGLLEKKDDVQLLF 211
Query: 491 FKFPS--------------------ILPGYKS----TPPSETSKGKEIADSSSR---ASK 393
+ P+ LPG KS T S KGKE+A S+ R ++K
Sbjct: 212 LQLPANLPLSKLQASTGGRDTAVSLTLPGDKSDKAATLSSPMLKGKEVAGSAPRFLASAK 271
Query: 392 GKEISESSENRASGDPSKTSESSKISGLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSP 213
GKEIS+SS + + ++K+ L++LP G +GKMLVYKSG +KLKLGD+L DVSP
Sbjct: 272 GKEISDSS----TISRRHNNTTNKVCSLQELPAGSMGKMLVYKSGAIKLKLGDILYDVSP 327
Query: 212 GCACIVSRHVMAMNTDDRHCSYLGDVNQRAVVTPEVDSLLD 90
G C S+ V+A+NT ++ C LG++ +RAVVTP+VD LL+
Sbjct: 328 GVECSFSQDVVAINTAEKQCCQLGELGKRAVVTPDVDFLLN 368
>ref|XP_015074519.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Solanum
pennellii]
Length = 371
Score = 166 bits (420), Expect = 2e-46
Identities = 99/221 (44%), Positives = 139/221 (62%), Gaps = 30/221 (13%)
Frame = -2
Query: 662 YNSYYPTTIPFRRPNSGDPEELDKAEFEEAP---EYDENSLLSAPELGLLDQDDNTRMLF 492
++S YP T+P RRP +GDPE L++AEF EA EYDEN++ A ELGLL++ D+ ++LF
Sbjct: 152 HHSNYPVTLPLRRPYAGDPEILNEAEFGEAAKNAEYDENNINPASELGLLEKKDDVQLLF 211
Query: 491 FKFPS--------------------ILPGYKS----TPPSETSKGKEIADSSSR---ASK 393
+ P+ LPG KS T S KGKE+A S+ R ++K
Sbjct: 212 LQLPANLPLSKLQASTGGRDTAVSLTLPGDKSDKAATLSSPMLKGKEVAGSAPRFLASAK 271
Query: 392 GKEISESSENRASGDPSKTSESSKISGLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSP 213
GKEI++SS + + ++K L++LP G +GKMLVYKSG +KLKLGD+L DVSP
Sbjct: 272 GKEIADSS----TISRRHNNTTNKACSLQELPAGSMGKMLVYKSGAIKLKLGDILYDVSP 327
Query: 212 GCACIVSRHVMAMNTDDRHCSYLGDVNQRAVVTPEVDSLLD 90
G C S+ V+A+NT ++ C LG++ +RAVVTP+VD LL+
Sbjct: 328 GVECSFSQDVVAINTAEKQCCQLGELGKRAVVTPDVDFLLN 368
>ref|XP_009370450.1| PREDICTED: uncharacterized protein LOC103959808 [Pyrus x
bretschneideri]
Length = 329
Score = 164 bits (416), Expect = 3e-46
Identities = 92/197 (46%), Positives = 128/197 (64%), Gaps = 3/197 (1%)
Frame = -2
Query: 665 DY-NSYYPTTIPFRRPNSGDPEELDKAEFEE--APEYDENSLLSAPELGLLDQDDNTRML 495
DY N+YYPTT+P R+PNSGDPE L+ EF E EYDE+++ A +LGLL++ ++L
Sbjct: 150 DYENTYYPTTLPLRQPNSGDPEILNANEFGEDAEKEYDESAINPASKLGLLEEKGKAKLL 209
Query: 494 FFKFPSILPGYKSTPPSETSKGKEIADSSSRASKGKEISESSENRASGDPSKTSESSKIS 315
F + PSILP ++ PS T+KGKE ++ S+ +SG P K
Sbjct: 210 FVQLPSILP--LTSKPSATAKGKE------------KVGSSTSLESSGAPKKEGS----- 250
Query: 314 GLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCACIVSRHVMAMNTDDRHCSYLGDV 135
E+LP G++GKMLVYKSG +KL+LGD L DVSPG + ++ V+ NT ++ C LG++
Sbjct: 251 -FEELPAGFMGKMLVYKSGAIKLRLGDTLYDVSPGSDSVSAQDVVVANTAEKKCIVLGEL 309
Query: 134 NQRAVVTPEVDSLLDMI 84
QRAVVTP+VDSLL++I
Sbjct: 310 RQRAVVTPDVDSLLNVI 326
>ref|XP_008234418.1| PREDICTED: uncharacterized protein LOC103333371 isoform X1 [Prunus
mume]
Length = 325
Score = 164 bits (415), Expect = 3e-46
Identities = 94/194 (48%), Positives = 123/194 (63%), Gaps = 3/194 (1%)
Frame = -2
Query: 656 SYYPTTIPFRRPNSGDPEE-LDKAEFEE--APEYDENSLLSAPELGLLDQDDNTRMLFFK 486
+YYPTT+P R+PNSGDP E L+ EF E EYDE+++ A ELGLL++ RMLF +
Sbjct: 150 TYYPTTLPLRKPNSGDPGEVLNVNEFGEDAEKEYDESTINHAAELGLLEEKAEARMLFVQ 209
Query: 485 FPSILPGYKSTPPSETSKGKEIADSSSRASKGKEISESSENRASGDPSKTSESSKISGLE 306
P+ILP T S T+KGKE ++ S+ ++G P K LE
Sbjct: 210 LPTILP---LTKRSATAKGKE------------KVGSSTSLESTGAPKKGCS------LE 248
Query: 305 DLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCACIVSRHVMAMNTDDRHCSYLGDVNQR 126
+LP GY+GKMLVYKSG +KLKLG+ LCDVSPG CI V +NT+++ C LG ++ R
Sbjct: 249 ELPGGYMGKMLVYKSGAIKLKLGNTLCDVSPGSDCICDEDVAVINTEEKTCCVLGGISHR 308
Query: 125 AVVTPEVDSLLDMI 84
AVVTP VDSLL++I
Sbjct: 309 AVVTPNVDSLLNVI 322
>ref|XP_008376400.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like [Malus
domestica]
Length = 329
Score = 164 bits (415), Expect = 4e-46
Identities = 93/197 (47%), Positives = 128/197 (64%), Gaps = 3/197 (1%)
Frame = -2
Query: 665 DY-NSYYPTTIPFRRPNSGDPEELDKAEFEE--APEYDENSLLSAPELGLLDQDDNTRML 495
DY N+YYPTT+P R+PNSGDPE L+ EF E EYDE+++ A +LGLL++ ++L
Sbjct: 150 DYENTYYPTTLPLRQPNSGDPEILNANEFGEDAEKEYDESTINPASKLGLLEEKVKAKLL 209
Query: 494 FFKFPSILPGYKSTPPSETSKGKEIADSSSRASKGKEISESSENRASGDPSKTSESSKIS 315
F + PSILP ++ PS T+KGKE ++ S +SG P K
Sbjct: 210 FVQLPSILP--LTSKPSATAKGKE------------KVGSSKSLESSGAPKKEGS----- 250
Query: 314 GLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCACIVSRHVMAMNTDDRHCSYLGDV 135
LE+LP G++GKMLVYKSG +KL+LGD L DVSPG + ++ V+ NT ++ C LG++
Sbjct: 251 -LEELPAGFMGKMLVYKSGAIKLRLGDTLYDVSPGSDSMSAQDVVVANTAEKKCIVLGEL 309
Query: 134 NQRAVVTPEVDSLLDMI 84
QRAVVTP+VDSLL++I
Sbjct: 310 RQRAVVTPDVDSLLNVI 326
>gb|KYP67913.1| DNA-directed RNA polymerase III subunit RPC4, partial [Cajanus
cajan]
Length = 345
Score = 164 bits (416), Expect = 4e-46
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 4/194 (2%)
Frame = -2
Query: 665 DYN-SYYPTTIPFRRPNSGDPEELDKAEFEEAP---EYDENSLLSAPELGLLDQDDNTRM 498
DY+ SYYPTT+P R+PNSGDPE LD+ EF EA EYDEN++ SA ELGLL++ + M
Sbjct: 174 DYDHSYYPTTLPLRKPNSGDPEILDEEEFGEAAASVEYDENAVNSAAELGLLEKSEQQTM 233
Query: 497 LFFKFPSILPGYKSTPPSETSKGKEIADSSSRASKGKEISESSENRASGDPSKTSESSKI 318
LFFKFP+ LP K + +KGKE +S+ +G+P+K SK
Sbjct: 234 LFFKFPAALPLEK-----QNNKGKEKIGTST---------------VTGEPTK----SKG 269
Query: 317 SGLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCACIVSRHVMAMNTDDRHCSYLGD 138
LE+LP+G++GKMLVYKSG +KLKLG+ L DVS G C+ ++ ++AMN + C L
Sbjct: 270 IALEELPRGHMGKMLVYKSGAIKLKLGETLFDVSSGTNCVFAQDIVAMNAAQKQCCNLSK 329
Query: 137 VNQRAVVTPEVDSL 96
+N+R VV P++DS+
Sbjct: 330 INKRVVVVPDLDSI 343
>ref|XP_006355616.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X2 [Solanum tuberosum]
Length = 368
Score = 165 bits (417), Expect = 5e-46
Identities = 96/218 (44%), Positives = 136/218 (62%), Gaps = 27/218 (12%)
Frame = -2
Query: 662 YNSYYPTTIPFRRPNSGDPEELDKAEFEEAPE---YDENSLLSAPELGLLDQDDNTRMLF 492
++S YP T+P RRP +GDPE L++AEF EA + YDEN++ A ELGLL++ D+ ++LF
Sbjct: 152 HHSNYPVTLPLRRPYAGDPEILNEAEFGEAAKNAVYDENNINPASELGLLEKKDDVQLLF 211
Query: 491 FKFPS--------------------ILPGYKS----TPPSETSKGKEIADSSSRASKGKE 384
+ P+ LPG KS T S KGKE+A S+ +KGKE
Sbjct: 212 LQLPANLPLSKLQASTGGRDTAVCLTLPGDKSDKAATLSSPMLKGKEVAGSALAGAKGKE 271
Query: 383 ISESSENRASGDPSKTSESSKISGLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCA 204
I++S + + ++K L++LP G +GKMLVYKSG +KLKLGD+L DVSPG
Sbjct: 272 IADSP----TISRRHNNTTNKACSLQELPAGSMGKMLVYKSGAIKLKLGDILYDVSPGVE 327
Query: 203 CIVSRHVMAMNTDDRHCSYLGDVNQRAVVTPEVDSLLD 90
C S+ V+A+NT ++ C LG++ +RAVVTP+VD LL+
Sbjct: 328 CSFSQDVVAINTAEKQCCQLGELGKRAVVTPDVDFLLN 365
>ref|XP_015167910.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X1 [Solanum tuberosum]
Length = 370
Score = 165 bits (417), Expect = 5e-46
Identities = 96/218 (44%), Positives = 136/218 (62%), Gaps = 27/218 (12%)
Frame = -2
Query: 662 YNSYYPTTIPFRRPNSGDPEELDKAEFEEAPE---YDENSLLSAPELGLLDQDDNTRMLF 492
++S YP T+P RRP +GDPE L++AEF EA + YDEN++ A ELGLL++ D+ ++LF
Sbjct: 154 HHSNYPVTLPLRRPYAGDPEILNEAEFGEAAKNAVYDENNINPASELGLLEKKDDVQLLF 213
Query: 491 FKFPS--------------------ILPGYKS----TPPSETSKGKEIADSSSRASKGKE 384
+ P+ LPG KS T S KGKE+A S+ +KGKE
Sbjct: 214 LQLPANLPLSKLQASTGGRDTAVCLTLPGDKSDKAATLSSPMLKGKEVAGSALAGAKGKE 273
Query: 383 ISESSENRASGDPSKTSESSKISGLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCA 204
I++S + + ++K L++LP G +GKMLVYKSG +KLKLGD+L DVSPG
Sbjct: 274 IADSP----TISRRHNNTTNKACSLQELPAGSMGKMLVYKSGAIKLKLGDILYDVSPGVE 329
Query: 203 CIVSRHVMAMNTDDRHCSYLGDVNQRAVVTPEVDSLLD 90
C S+ V+A+NT ++ C LG++ +RAVVTP+VD LL+
Sbjct: 330 CSFSQDVVAINTAEKQCCQLGELGKRAVVTPDVDFLLN 367
>ref|XP_009773975.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
[Nicotiana sylvestris]
Length = 226
Score = 160 bits (406), Expect = 5e-46
Identities = 86/197 (43%), Positives = 124/197 (62%), Gaps = 3/197 (1%)
Frame = -2
Query: 665 DYNSYYPTTIPFRRPNSGDPEELDKAEFEEAPE---YDENSLLSAPELGLLDQDDNTRML 495
DY + YPTT+P RRP SG+PE LD+ EF EA YDEN++ A ELGL++++ +M
Sbjct: 57 DYYTNYPTTLPLRRPYSGNPELLDEEEFGEASRSSSYDENTIKPAMELGLMEENLEEKMF 116
Query: 494 FFKFPSILPGYKSTPPSETSKGKEIADSSSRASKGKEISESSENRASGDPSKTSESSKIS 315
F + P+ +P K + +E S+ SSSR SK K S
Sbjct: 117 FIQLPTAMPMLKQSIKTEGSEA-----SSSRPSKAKAYS--------------------- 150
Query: 314 GLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCACIVSRHVMAMNTDDRHCSYLGDV 135
+ +LP+G++GKMLVYKSG +KLKLGD L DVSPG C ++ V+A+NT+++HCS +G++
Sbjct: 151 -INELPRGFMGKMLVYKSGAIKLKLGDTLYDVSPGMDCSFAQDVVAVNTEEKHCSNIGEL 209
Query: 134 NQRAVVTPEVDSLLDMI 84
+R ++TP+VDS+LD I
Sbjct: 210 TKRIIITPDVDSILDSI 226
>ref|XP_015581085.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 isoform X2
[Ricinus communis] gi|1000985295|ref|XP_015581092.1|
PREDICTED: DNA-directed RNA polymerase III subunit rpc4
isoform X2 [Ricinus communis]
Length = 263
Score = 161 bits (408), Expect = 7e-46
Identities = 95/198 (47%), Positives = 129/198 (65%), Gaps = 4/198 (2%)
Frame = -2
Query: 665 DYN-SYYPTTIPFRRPNSGDPEELDKAEFEEAP---EYDENSLLSAPELGLLDQDDNTRM 498
DY+ +YYPTT+P RRP SGDP LD+AEF EA EYDE+++ A +L LL++ D +M
Sbjct: 83 DYDRTYYPTTLPLRRPYSGDPVLLDEAEFGEAARKLEYDESTMNPASDLELLEECDTEKM 142
Query: 497 LFFKFPSILPGYKSTPPSETSKGKEIADSSSRASKGKEISESSENRASGDPSKTSESSKI 318
+FF+ P+ LP K S ++KGKE A+ S S+GK ++ K
Sbjct: 143 IFFQLPAKLPLVKR---SASAKGKEKAEGSI-PSQGKNAAK-----------------KE 181
Query: 317 SGLEDLPKGYIGKMLVYKSGDVKLKLGDVLCDVSPGCACIVSRHVMAMNTDDRHCSYLGD 138
S L+ L GY+GKMLVY+SG VKLKLGD L DVS G C+ ++ VMA+NT +HC +G+
Sbjct: 182 SSLDGLSAGYMGKMLVYRSGAVKLKLGDTLYDVSQGSDCMFAQDVMAINTAAKHCCTIGE 241
Query: 137 VNQRAVVTPEVDSLLDMI 84
+ +RAVVTP+VDSLLD +
Sbjct: 242 LEKRAVVTPDVDSLLDSV 259