BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00018957
         (1370 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP35708.1| Copia protein [Cajanus cajan]                          366   e-119
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]   371   e-118
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]   377   e-118
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   375   e-117
gb|KYP64118.1| Retrovirus-related Pol polyprotein from transposo...   358   e-117
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   380   e-116
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   378   e-115
ref|XP_015889801.1| PREDICTED: uncharacterized mitochondrial pro...   353   e-115
ref|XP_015386751.1| PREDICTED: uncharacterized mitochondrial pro...   350   e-114
ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643...   368   e-114
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   374   e-114
gb|KYP71313.1| Retrovirus-related Pol polyprotein from transposo...   349   e-113
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   372   e-113
ref|XP_015689736.1| PREDICTED: uncharacterized mitochondrial pro...   347   e-113
ref|XP_013594553.1| PREDICTED: uncharacterized mitochondrial pro...   347   e-113
gb|AAB82754.1| retrofit [Oryza longistaminata]                        372   e-113
gb|KYP75364.1| Copia protein [Cajanus cajan]                          355   e-112
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  370   e-112
gb|KYP45104.1| Retrovirus-related Pol polyprotein from transposo...   349   e-112
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   367   e-112

>gb|KYP35708.1| Copia protein [Cajanus cajan]
          Length = 493

 Score =  366 bits (939), Expect = e-119
 Identities = 186/396 (46%), Positives = 249/396 (62%)
 Frame = +2

Query: 2    AFLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXX 181
            AFL+G L++TVYM+QP GF D  KP+HVCKL KAIYGLKQAP+AW               
Sbjct: 97   AFLNGYLKQTVYMNQPEGFADPTKPNHVCKLSKAIYGLKQAPRAWFDSLKNALLKWGFQN 156

Query: 182  XXXXXXXXYRRTGSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLG 361
                      R  ++             TG+++K +   ++ L+  FSLK LG++ YFLG
Sbjct: 157  TKSDTSLFTLRGKNHITFLLIYVDDIIVTGNNTKFLEAFVKQLNIVFSLKDLGQLHYFLG 216

Query: 362  LEVHKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFSSPSVYRST 541
            +EVH+   G+ L Q KY  D+L    M +  PC TP  + ++ ++ +     +P+ +R  
Sbjct: 217  IEVHRDATGMYLKQSKYIKDLLRKFKMENASPCPTPMVTGKQFTI-EGEKLKNPTEFRQA 275

Query: 542  IGALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQMQ 721
            IGALQYLT TRPD+AF VNKLSQF+ SPT++HW   KR+LRY++GT+ Y +       + 
Sbjct: 276  IGALQYLTNTRPDIAFSVNKLSQFMSSPTLDHWQGIKRILRYLQGTMHYCLHIKCSAYLD 335

Query: 722  LQGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATSDF 901
            + GFSDADWA S+DDRKS +G C+F G  +VSWSS+KQ VV+RSSTESEYR+LA   ++ 
Sbjct: 336  IAGFSDADWATSVDDRKSMAGQCVFLGDTLVSWSSRKQQVVSRSSTESEYRALADLAAEI 395

Query: 902  LWIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKEVE 1081
             W +S+  EL +P     +LWCDN SA +LASNPV HARTKHIE D H+IR++V   +V 
Sbjct: 396  TWTRSLLTELKLPQPRKPILWCDNLSAKALASNPVMHARTKHIETDVHYIRDQVLQDKVI 455

Query: 1082 VRYLSSEDQLADALTKPLPAHRFQQLCSKFTMRTPP 1189
            V Y+ S DQ+AD LTK L   RF QL  K  +   P
Sbjct: 456  VAYVPSADQIADCLTKALTHTRFNQLRDKLGVTPSP 491


>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
          Length = 773

 Score =  371 bits (953), Expect = e-118
 Identities = 187/395 (47%), Positives = 248/395 (62%)
 Frame = +2

Query: 5    FLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXXX 184
            FL+GDL+E V+M QP GF++   P++VCKL KA+YGLKQAP+AW                
Sbjct: 319  FLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSS 378

Query: 185  XXXXXXXYRRTGSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLGL 364
                      T ++             TG +   +S  I  L   F+L+ LG + YFLG+
Sbjct: 379  RADTSLFIFHTATDILILLVYVDDILVTGSNPTLVSHFISYLRTKFALRDLGPLSYFLGI 438

Query: 365  EVHKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFSSPSVYRSTI 544
            +  ++ + L LNQ KY  D+L+   M   KP  TP    + LS  D    S PS YR T+
Sbjct: 439  QAQQLGSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGVSLSDPSEYRRTV 498

Query: 545  GALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQMQL 724
            GALQY+TLTRPD+AF VNK  QF+  P+  HW A KR+LRY+KGT+   + F P   M+ 
Sbjct: 499  GALQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMEX 558

Query: 725  QGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATSDFL 904
            QG+SDADWA   DDR+STSG+C+F G N++SWSS KQ +V++SS ESEYR L S T++ +
Sbjct: 559  QGYSDADWASCPDDRRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELV 618

Query: 905  WIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKEVEV 1084
            WI+S+  EL +P S P +LWCDN SA  LA+NPVFH+R+KHIE+D HFIREKV  +E+++
Sbjct: 619  WIQSLLQELCLPTS-PPILWCDNQSAAHLAANPVFHSRSKHIELDLHFIREKVLRQELQI 677

Query: 1085 RYLSSEDQLADALTKPLPAHRFQQLCSKFTMRTPP 1189
             Y+ S DQLAD  TK LP  +F  L SK T+  PP
Sbjct: 678  CYVPSGDQLADIFTKHLPITQFCNLRSKLTVTYPP 712


>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score =  377 bits (967), Expect = e-118
 Identities = 187/397 (47%), Positives = 250/397 (62%)
 Frame = +2

Query: 2    AFLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXX 181
            AFL+G++ ETVY+ QPAGF+ ++ P HVCKL KA+YGLKQAP+ W               
Sbjct: 604  AFLNGEITETVYLSQPAGFVSTSHPQHVCKLQKALYGLKQAPRVWFHKLREALHTWGFIS 663

Query: 182  XXXXXXXXYRRTGSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLG 361
                      +   N             TG++   +  +IQ L   F+LK LG V+ FLG
Sbjct: 664  STSDTSLFIYKHNGNFLLLLVYVDDLLITGNNVPLVQTLIQDLQNRFALKDLGLVKDFLG 723

Query: 362  LEVHKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFSSPSVYRST 541
             E  +   GL L Q KY  D+L    M   KP  TP +++ KL       FS P++YRST
Sbjct: 724  FEALRTTTGLHLTQSKYTTDLLIKTKMHSAKPVPTPMSAALKLHAASGPAFSDPTLYRST 783

Query: 542  IGALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQMQ 721
            IGALQYLT TRPD+AF VNKLSQ+L  PT  HW ACKRVLRY+KG +   + F P   + 
Sbjct: 784  IGALQYLTYTRPDIAFAVNKLSQYLQQPTELHWTACKRVLRYLKGIVHRGLHFTPASSLH 843

Query: 722  LQGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATSDF 901
            LQ ++DADWA SIDDR+ST+G+C+F G N+ +WSS+KQ VVARSST++EYR+LA A+ + 
Sbjct: 844  LQVYTDADWASSIDDRRSTTGYCVFLGTNLFTWSSRKQPVVARSSTKAEYRALAHASXEV 903

Query: 902  LWIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKEVE 1081
             W++S+F ELGI +    ++WCDN  A +LA+NPVFH+RTKHIE+D  ++RE+V +K++ 
Sbjct: 904  AWLRSLFSELGISLVNTPVIWCDNQGAGALAANPVFHSRTKHIEVDVXYVREQVLDKKLV 963

Query: 1082 VRYLSSEDQLADALTKPLPAHRFQQLCSKFTMRTPPG 1192
            V Y+ S +Q AD  TKPL   RFQ L +K  +    G
Sbjct: 964  VSYVPSVEQXADLFTKPLSIPRFQYLLTKLNLXVSLG 1000


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  375 bits (962), Expect = e-117
 Identities = 184/387 (47%), Positives = 253/387 (65%), Gaps = 2/387 (0%)
 Frame = +2

Query: 2    AFLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXX 181
            AFLHG L+E VYM QP GF +  +P+++CKL KA+YGLKQAP+AW               
Sbjct: 538  AFLHGYLEEEVYMRQPPGFENKGQPNYLCKLDKALYGLKQAPRAWYSRLSTKLQELGFIS 597

Query: 182  XXXXXXXXYRRTGSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLG 361
                    +   G                   ++ ++ +++ L++ F+LK LG++ YFLG
Sbjct: 598  SKADTSLFFYNKGGCTIFILVYVDDIIVASSSAEVVAALLKDLEKDFALKDLGDLHYFLG 657

Query: 362  LEVHKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSL--GDSAPFSSPSVYR 535
            +EV K+  GL+L+Q  YA DIL  A M  CKP  TP ++++KLS+  GD    +  S YR
Sbjct: 658  IEVKKVSQGLVLSQAWYASDILKRAGMSICKPASTPLSTTEKLSIEDGDFLGQNDASHYR 717

Query: 536  STIGALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQ 715
            S +GALQYLTLTR DL+F+VNK+ QFLHSPT  HW A KR+LRYIKGT+ + + F     
Sbjct: 718  SIVGALQYLTLTRSDLSFLVNKVCQFLHSPTTVHWSAVKRILRYIKGTVEFGLRFGKSDS 777

Query: 716  MQLQGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATS 895
            M +  FSDADWAG  DDR+ST GF +F GPN++SWS++KQ+ V+RSSTE+EY++LA+AT+
Sbjct: 778  MLISAFSDADWAGCSDDRRSTGGFAVFLGPNLISWSARKQATVSRSSTEAEYKALANATT 837

Query: 896  DFLWIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKE 1075
            +  W++ +  EL I     + LWCDN  A  L++NPVFHARTKHIEID HF+RE+V  K 
Sbjct: 838  EVTWVRKILDELRIARPSVAQLWCDNLGATYLSANPVFHARTKHIEIDYHFVREQVAKKL 897

Query: 1076 VEVRYLSSEDQLADALTKPLPAHRFQQ 1156
            ++++++S+ DQLAD  TK LPA    Q
Sbjct: 898  LDIQFISTTDQLADGFTKSLPAPSLAQ 924


>gb|KYP64118.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 416

 Score =  358 bits (918), Expect = e-117
 Identities = 179/390 (45%), Positives = 250/390 (64%), Gaps = 1/390 (0%)
 Frame = +2

Query: 2    AFLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXX 181
            AFLHG+LQET+YM QP GF+   K   VCKL+KA+YGLKQAP++W               
Sbjct: 6    AFLHGNLQETIYMTQPPGFVSFDKHK-VCKLLKALYGLKQAPRSWFHKLSMTLRSLGFNS 64

Query: 182  XXXXXXXXYRRTGSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLG 361
                     R T ++             T   S +I  +I  L+  FSLK LG + YFLG
Sbjct: 65   AKSDTALFMRFTPTSKTYVLVYVDDIIITSSSSSEIISLIAHLNNKFSLKDLGPLHYFLG 124

Query: 362  LEV-HKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFSSPSVYRS 538
            +EV H    G+LL+Q KY  D+L   N+LD KP  TP  S  KL+   S     P+ YRS
Sbjct: 125  IEVQHHSDGGILLSQSKYIRDLLHKTNLLDSKPQPTPMVSGLKLTADGSFSVQDPTHYRS 184

Query: 539  TIGALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQM 718
             +GALQY+T+TRP+++F VNK+ QF+H P  +HW A KR+LRY++G+++Y +   P  Q+
Sbjct: 185  IVGALQYITVTRPEISFSVNKVCQFMHKPQEHHWRAVKRILRYLQGSITYGLHIKPSQQL 244

Query: 719  QLQGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATSD 898
             + GF D+DW    DDRKST+G+C++ GPN+VSWSSKKQ VV+RSSTE+EYR LA+ T+D
Sbjct: 245  HIMGFCDSDWGSDPDDRKSTTGYCVYLGPNLVSWSSKKQVVVSRSSTEAEYRGLAAVTAD 304

Query: 899  FLWIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKEV 1078
             LW++++  EL +P++ P  ++CDN  A+ L +NPV H+RTKH E+D HF+R+KV ++E+
Sbjct: 305  ILWLQNLLKELRVPVALPR-IYCDNLGAVHLTANPVMHSRTKHFELDLHFVRDKVLSREL 363

Query: 1079 EVRYLSSEDQLADALTKPLPAHRFQQLCSK 1168
             V +L +E Q+AD LTK +   +F    SK
Sbjct: 364  VVIHLPAEFQVADILTKAISNPQFTTFRSK 393


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  380 bits (976), Expect = e-116
 Identities = 186/383 (48%), Positives = 247/383 (64%)
 Frame = +2

Query: 2    AFLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXX 181
            AFL+GDLQE V+M QP GFID   P+ VC+L KA+YGLKQAP+AW               
Sbjct: 1049 AFLNGDLQEEVFMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLSFGFVS 1108

Query: 182  XXXXXXXXYRRTGSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLG 361
                     R T ++              G D+  I+ +I  L+  FSLK LGEV YFLG
Sbjct: 1109 AKSDQSLFLRFTPNHITYVLVYVDDILVIGSDTAAITSLIAQLNSEFSLKDLGEVHYFLG 1168

Query: 362  LEVHKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFSSPSVYRST 541
            ++V    NGL L+Q KY  D+L    M+ CKP  TP  +  KL +GD  P      YRST
Sbjct: 1169 IQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRVGDGDPVEDLHGYRST 1228

Query: 542  IGALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQMQ 721
            +GALQY+T+TRP+L+F VNK+ QF+ +PT  HW   KR+LRY++GTL + +       + 
Sbjct: 1229 VGALQYVTITRPELSFSVNKVCQFMQNPTEEHWKVVKRILRYLQGTLQHGLHLKKSSNLD 1288

Query: 722  LQGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATSDF 901
            L GF DADWA  +DDR+STSG C+F GPN++SW SKKQ +V+RSS E EYRSLA   ++ 
Sbjct: 1289 LIGFCDADWASDLDDRRSTSGHCVFLGPNLISWQSKKQHIVSRSSIEIEYRSLAGLVAEI 1348

Query: 902  LWIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKEVE 1081
             W++S+  EL +P+++P L+WCDN S + L++NPV HARTKHIE+D +F+REKV  KEVE
Sbjct: 1349 TWLRSLLSELQLPLAKPPLVWCDNLSTVLLSANPVLHARTKHIELDLYFVREKVIRKEVE 1408

Query: 1082 VRYLSSEDQLADALTKPLPAHRF 1150
            VR++ S DQLAD LTK + + +F
Sbjct: 1409 VRHVPSADQLADVLTKTVSSTQF 1431


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  378 bits (971), Expect = e-115
 Identities = 187/394 (47%), Positives = 250/394 (63%), Gaps = 2/394 (0%)
 Frame = +2

Query: 2    AFLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXX 181
            AFLHG L+E VYM QP GF D  KP HVCKL KA+YGLKQAP+AW               
Sbjct: 1057 AFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKG 1116

Query: 182  XXXXXXXXYRRTGSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLG 361
                    +   G                    K  + ++Q L   F+LK LGE+ YFLG
Sbjct: 1117 SKPDTSLFFLNKGDITMFVLVYVDDIIVASSSEKATAALLQDLKGEFALKDLGELHYFLG 1176

Query: 362  LEVHKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFS--SPSVYR 535
            +EV K+QNG++LNQ KYA D+L    M+DCKP +TP + S+KLSL + +       S YR
Sbjct: 1177 IEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYR 1236

Query: 536  STIGALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQ 715
            S +GALQYLTLTRPD+AF VNK+ QFLH+PT  HW A KR+LRY+K      +  H    
Sbjct: 1237 SVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGS 1296

Query: 716  MQLQGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATS 895
              + GFSDADWAG +DDR+ST GF IF G N+VSW+++KQ+ V+RSSTESEY+++A+AT+
Sbjct: 1297 TLVSGFSDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATA 1356

Query: 896  DFLWIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKE 1075
            + +W++++  EL I   + + +WCDN  A  L++NPVFHARTKHIE+D HF+RE+V  K 
Sbjct: 1357 EIMWVQTLLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKL 1416

Query: 1076 VEVRYLSSEDQLADALTKPLPAHRFQQLCSKFTM 1177
            +E+ ++S+ DQ+AD  TKPL     +   S   +
Sbjct: 1417 LEIDFVSTNDQVADGFTKPLSVRLLENFKSNLNL 1450


>ref|XP_015889801.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
            [Ziziphus jujuba]
          Length = 426

 Score =  353 bits (905), Expect = e-115
 Identities = 173/370 (46%), Positives = 241/370 (65%)
 Frame = +2

Query: 38   MHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXXXXXXXXXXYRRT 217
            M QP GF+ S  P++VCKL KA+YGL+QAP+AW                          +
Sbjct: 1    MSQPEGFVSSTHPAYVCKLQKALYGLRQAPRAWFDKLKQALLHKGFKNSQADTSLFMYNS 60

Query: 218  GSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLGLEVHKIQNGLLL 397
            G+              TG+++  ++ +I  L++ FSLK LG++ +FLG+EVH+ +  + L
Sbjct: 61   GTTCAMILVYVDDIIITGNNAIFVNQLIGDLNQQFSLKDLGDLHFFLGIEVHRSEGVMHL 120

Query: 398  NQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFSSPSVYRSTIGALQYLTLTRP 577
             Q KY  D+L    M   K   +P  + ++LSL D   F +P +YRST+GALQYLT+TRP
Sbjct: 121  TQSKYIRDLLQKTKMDGAKEVSSPMLTGRQLSLYDGDMFDNPELYRSTVGALQYLTITRP 180

Query: 578  DLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQMQLQGFSDADWAGS 757
            +++F VNKLSQFLH+PT +HW ACKR+LRY+KGT+ Y        Q+ L  F+D+DWA +
Sbjct: 181  EISFSVNKLSQFLHAPTTDHWEACKRLLRYLKGTIQYGFQLQASNQLVLHAFADSDWASN 240

Query: 758  IDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATSDFLWIKSVFHELGI 937
             DDRKSTSG+CIF G +++SWSSKKQ VVARSSTE+EYR+LA  T++  W++++  EL  
Sbjct: 241  PDDRKSTSGYCIFLGASLISWSSKKQHVVARSSTEAEYRALAHVTAELCWLRNLSQELQF 300

Query: 938  PISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKEVEVRYLSSEDQLAD 1117
               +P ++W DN  A  LASNPV HAR KHIEID HF+R+KV +KE+E+RY+ S++Q+AD
Sbjct: 301  LFDKP-IIWSDNIGAALLASNPVHHARVKHIEIDLHFVRDKVLDKELEIRYVPSKEQIAD 359

Query: 1118 ALTKPLPAHR 1147
              TK L   R
Sbjct: 360  IFTKSLVDER 369


>ref|XP_015386751.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
            [Citrus sinensis]
          Length = 389

 Score =  350 bits (898), Expect = e-114
 Identities = 170/377 (45%), Positives = 242/377 (64%)
 Frame = +2

Query: 38   MHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXXXXXXXXXXYRRT 217
            M QP GF + +KP+++CKL KA+YGL+QAP+AW                       +RRT
Sbjct: 1    MPQPEGFENKSKPNYICKLNKALYGLRQAPRAWFDKLKSALYSWDFENSKYDTSLFFRRT 60

Query: 218  GSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLGLEVHKIQNGLLL 397
             S+             TG  SKD+  VI  L + F+LK LG + +FLG++V + Q+ +LL
Sbjct: 61   KSDIIIMLIYVDDIIITGSSSKDVEEVIVKLSKTFALKDLGSLNFFLGIQVTRNQDTILL 120

Query: 398  NQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFSSPSVYRSTIGALQYLTLTRP 577
            +Q KY  D+L    M +CK  DTP+++S+KL   + A F  P+ YRS IG+LQY  LTRP
Sbjct: 121  SQTKYVQDLLIKVEMANCKGIDTPFSTSEKLKRNEGAKFHDPTFYRSVIGSLQYAVLTRP 180

Query: 578  DLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQMQLQGFSDADWAGS 757
            +LAF V+KLSQF+ +P  +HW ACK VLRY+K T++  +         L  ++DADWA  
Sbjct: 181  ELAFYVSKLSQFMSNPRQSHWIACKTVLRYLKNTMNMCLRIKKSEYFDLIAYTDADWASD 240

Query: 758  IDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATSDFLWIKSVFHELGI 937
             DDR+S SG+C++ G N+V+WSS+KQ VVARS+ ESEYR++A  +++  WI S+  EL +
Sbjct: 241  PDDRRSISGYCVYLGNNLVAWSSRKQGVVARSTAESEYRAMALCSAEITWISSLLTELEL 300

Query: 938  PISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKEVEVRYLSSEDQLAD 1117
             I    ++  D+ SA ++A+NPV+H+RTKH EID HFIR+KV   E+E+ Y++S+DQ AD
Sbjct: 301  KIQGTPMILSDSTSAAAIAANPVYHSRTKHFEIDLHFIRDKVMKGEIEITYVASKDQTAD 360

Query: 1118 ALTKPLPAHRFQQLCSK 1168
             LTKPLP ++F    SK
Sbjct: 361  VLTKPLPYYKFDYFRSK 377


>ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643719 [Jatropha curcas]
          Length = 1003

 Score =  368 bits (945), Expect = e-114
 Identities = 185/396 (46%), Positives = 250/396 (63%)
 Frame = +2

Query: 2    AFLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXX 181
            AFLHG L E +YM QP GFIDS  P +VCKL K++YGL+QAP+AW               
Sbjct: 606  AFLHGYLDEDIYMDQPPGFIDSVHPDYVCKLQKSLYGLRQAPRAWFQRLSNFLLQLGFKA 665

Query: 182  XXXXXXXXYRRTGSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLG 361
                      + G+              T  D   +   + AL   F ++ LG + YFLG
Sbjct: 666  SKADTSLFIYQDGNIQCFILVYVDDILLTCSDFSKLEFFLHALKSAFPVRDLGRLTYFLG 725

Query: 362  LEVHKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFSSPSVYRST 541
            +EV    +G+LL+Q+KY  D+L   NM D KP  TP  ++  LS       ++   +R  
Sbjct: 726  IEVIPTSHGILLSQQKYVRDLLLQFNMNDSKPTLTPMATTPPLSKHGDEILATADQFRKL 785

Query: 542  IGALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQMQ 721
            +G LQY+TLTRPD++F VNKL+QF+H PT  HW A KR+LRY+ GT S  +       + 
Sbjct: 786  VGTLQYVTLTRPDVSFAVNKLAQFMHHPTAAHWIAAKRLLRYLHGTASMGLFLSIDSPIS 845

Query: 722  LQGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATSDF 901
            LQ FSD+DWAG  DDRKSTSG+ I+ G N++SWSSKKQS VARSSTESEYRS+A ATS+ 
Sbjct: 846  LQCFSDSDWAGCPDDRKSTSGYAIYLGNNLISWSSKKQSTVARSSTESEYRSIAHATSEI 905

Query: 902  LWIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKEVE 1081
            +WI S+  ELG+ +  P+ LWCDN  AI L SNPVFHARTKHIE+D HF+R++VQ+K+++
Sbjct: 906  MWILSLLSELGVSVL-PATLWCDNIGAIYLTSNPVFHARTKHIELDVHFVRDQVQHKKIQ 964

Query: 1082 VRYLSSEDQLADALTKPLPAHRFQQLCSKFTMRTPP 1189
            ++++S +DQ+AD +TKPL +  F +   K  ++ PP
Sbjct: 965  IKFISGQDQIADIMTKPLGSRLFLRHRDKLRLQAPP 1000


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  374 bits (961), Expect = e-114
 Identities = 189/396 (47%), Positives = 250/396 (63%)
 Frame = +2

Query: 2    AFLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXX 181
            AFL+GDL+E V+M QP GF++   P++VCKL KA+YGLKQAP+AW               
Sbjct: 971  AFLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQS 1030

Query: 182  XXXXXXXXYRRTGSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLG 361
                       T ++             TG +   +S  I  L   F+L+ LG + YFLG
Sbjct: 1031 SRADTSLFIFHTATDILILLVYVDDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFLG 1090

Query: 362  LEVHKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFSSPSVYRST 541
            ++  ++ + L LNQ KY  D+L+   M   KP  TP    + LS  D    S PS YR T
Sbjct: 1091 IQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGMSLSDPSEYRRT 1150

Query: 542  IGALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQMQ 721
            +GALQY+TLTRPD+AF VNK  QF+  P+  HW A KR+LRY+KGT+   + F P   M+
Sbjct: 1151 VGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYLKGTIHLGLHFQPAASME 1210

Query: 722  LQGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATSDF 901
            LQG+SDADWA   DDR+STSG+C+F G N++SWSS KQ +V++SS ESEYR L S T++ 
Sbjct: 1211 LQGYSDADWASCPDDRRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAEL 1270

Query: 902  LWIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKEVE 1081
            +WI+S+  EL +P S P +LWCDN SA  LA+NPVFH+R+KHIE+D HFIREKV  +E++
Sbjct: 1271 VWIQSLLQELCLPTS-PPILWCDNQSAAHLAANPVFHSRSKHIELDLHFIREKVLRQELQ 1329

Query: 1082 VRYLSSEDQLADALTKPLPAHRFQQLCSKFTMRTPP 1189
            + Y+ S DQLAD  TK LP  +F  L SK T+  PP
Sbjct: 1330 ICYVPSGDQLADIFTKHLPITQFCNLRSKLTVTYPP 1365


>gb|KYP71313.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 413

 Score =  349 bits (895), Expect = e-113
 Identities = 176/390 (45%), Positives = 241/390 (61%), Gaps = 1/390 (0%)
 Frame = +2

Query: 2    AFLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXX 181
            AFLHGDL+E +YM QP GF+       VCKL K++YGLKQ+P+AW               
Sbjct: 14   AFLHGDLEEEIYMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIR 73

Query: 182  XXXXXXXXYRRTGSNXXXXXXXXXXXXX-TGDDSKDISLVIQALDRHFSLKHLGEVQYFL 358
                    +RR+ ++              TGDD + I  + Q L +HF  K LG ++YFL
Sbjct: 74   CETDHSVFFRRSSTHRFIYLVVYVDDIVITGDDQEGIKALKQHLFKHFQTKDLGPLRYFL 133

Query: 359  GLEVHKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFSSPSVYRS 538
            G+EV + ++G+ ++Q+KYA+DIL    + DCKP DTP + + KL      P+  P  YR 
Sbjct: 134  GIEVAQSKSGIAISQRKYALDILEETGLTDCKPVDTPMDPNVKLMPNQGEPYPDPGRYRR 193

Query: 539  TIGALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQM 718
             +G L YLT+TRPD++F V+ +SQFL+SP  +HW A  R+LRYIK +    + ++     
Sbjct: 194  LVGKLNYLTMTRPDISFPVSVVSQFLNSPCESHWLAVVRILRYIKRSPGKGLVYNDRGHT 253

Query: 719  QLQGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATSD 898
             + G+SDADWAG   DR+STSG+C+F G N+VSW SKKQSVVARSSTE+EYR++A  T +
Sbjct: 254  NIVGYSDADWAGDASDRRSTSGYCVFMGGNLVSWKSKKQSVVARSSTEAEYRAMAHTTCE 313

Query: 899  FLWIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKEV 1078
             LW+K +  EL         L CDN SA+ L+SNPVFH RTKHIE+D HFIREK+ +  +
Sbjct: 314  LLWLKFLIQELQFCKVGHMELVCDNQSALYLSSNPVFHERTKHIEVDCHFIREKILSGII 373

Query: 1079 EVRYLSSEDQLADALTKPLPAHRFQQLCSK 1168
            +   + S+DQLAD  TK L   R   +C+K
Sbjct: 374  KTSSVCSKDQLADIFTKSLRGPRITYICNK 403


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  372 bits (954), Expect = e-113
 Identities = 179/380 (47%), Positives = 246/380 (64%), Gaps = 2/380 (0%)
 Frame = +2

Query: 2    AFLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXX 181
            AFLHG L+E VYM QP G+ DS K ++VCKL KA+YGLKQAP+AW               
Sbjct: 917  AFLHGVLEEEVYMQQPPGYEDSTKLNYVCKLDKALYGLKQAPRAWYSRLSNKLLSLGFQA 976

Query: 182  XXXXXXXXYRRTGSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLG 361
                    +   GS                   K    ++  L++ F+LK LG++ YFLG
Sbjct: 977  SKADTSLFFYNKGSVTIFVLVYVDDIIVASSTHKATEALLSDLNKEFALKDLGDLNYFLG 1036

Query: 362  LEVHKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFSSPSV--YR 535
            +EV+K+++G++L Q KYA D+L    M DCKP  TP ++S+KLS+ + +P     +  YR
Sbjct: 1037 IEVNKVRDGIILTQDKYASDLLKKVGMSDCKPISTPLSTSEKLSIHEGSPLGEKDITQYR 1096

Query: 536  STIGALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQ 715
            S +GALQYLTLTRPD+AF VNK+ QFLH+PT  HW A KR+LRYIK   +  +  H    
Sbjct: 1097 SIVGALQYLTLTRPDIAFSVNKVCQFLHAPTTLHWAAVKRILRYIKQCTNLGLHIHRSDS 1156

Query: 716  MQLQGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATS 895
              +  FSDADWAGS+DDRKST GF +F G N+VSWS++KQ  V+RSSTESEY++LA+AT+
Sbjct: 1157 TLVSAFSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTESEYKALANATA 1216

Query: 896  DFLWIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKE 1075
            + +W++ +  E+ I     + LWCDN  A  L++NP+FHARTKHIE+D HF+R++V  K 
Sbjct: 1217 ELIWVQILLTEISIKSPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDYHFVRDRVAKKL 1276

Query: 1076 VEVRYLSSEDQLADALTKPL 1135
            +++ Y+ + DQ+AD  TKPL
Sbjct: 1277 LDIEYVPTGDQVADGFTKPL 1296


>ref|XP_015689736.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
            [Oryza brachyantha]
          Length = 385

 Score =  347 bits (890), Expect = e-113
 Identities = 173/368 (47%), Positives = 234/368 (63%), Gaps = 2/368 (0%)
 Frame = +2

Query: 38   MHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXXXXXXXXXXYRRT 217
            M Q  GF D  KP ++CKL K++YGLKQAP AW                       Y   
Sbjct: 1    MEQLPGFKDVTKPHYICKLDKSLYGLKQAPGAWFARLSKKLIDLGFSASKADTSLFYIHK 60

Query: 218  GSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLGLEVHKIQNGLLL 397
            G                    +  S ++Q L   F+LK LGE+ YFLG+EV K  NG++L
Sbjct: 61   GDIAIFILVYVDDIIVASSSERATSALLQDLKAEFALKDLGELYYFLGIEVSKTHNGIVL 120

Query: 398  NQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPF--SSPSVYRSTIGALQYLTLT 571
             Q KYA ++L    MLDCKP +TP + S+KLSL + +    +  + YRS +GALQYLTLT
Sbjct: 121  TQDKYATNLLKKVGMLDCKPANTPLSVSEKLSLHEGSLLGPNDATQYRSIVGALQYLTLT 180

Query: 572  RPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQMQLQGFSDADWA 751
            RPD+AF VNK+ QFLH+PT  HW A KR+LR IK   S  +  H     ++ GFSDADWA
Sbjct: 181  RPDIAFSVNKVCQFLHAPTTVHWTAVKRILRCIKQCTSMGLNIHRSGSTRVSGFSDADWA 240

Query: 752  GSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATSDFLWIKSVFHEL 931
            GS+DDRKST GF +F G N+VSWS++KQ+ V+RSST+SEY+++A+AT + +W++++  EL
Sbjct: 241  GSVDDRKSTGGFAVFIGSNLVSWSARKQATVSRSSTQSEYKAIANATVEIMWVQTLLVEL 300

Query: 932  GIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKEVEVRYLSSEDQL 1111
             I   + + +WCDN  A  L++NPVFHARTK+IE+D HF+RE+V  K +E+ ++SS DQ+
Sbjct: 301  RIKSPQAAKIWCDNLGAKYLSANPVFHARTKYIEVDYHFVRERVSQKLLEIDFVSSGDQV 360

Query: 1112 ADALTKPL 1135
            AD  TKPL
Sbjct: 361  ADGFTKPL 368


>ref|XP_013594553.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
            [Brassica oleracea var. oleracea]
          Length = 386

 Score =  347 bits (890), Expect = e-113
 Identities = 178/380 (46%), Positives = 232/380 (61%)
 Frame = +2

Query: 38   MHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXXXXXXXXXXYRRT 217
            M QP G ID  KP+HV KL KA+YGLKQAP+AW                         +T
Sbjct: 1    MLQPPGMIDKDKPNHVWKLKKAVYGLKQAPRAWYQALKDFLISIGFKNSLADASLFILQT 60

Query: 218  GSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLGLEVHKIQNGLLL 397
            GS+             TG  ++++  V   L   FSLK LGE+ YFLG+E  + + GL L
Sbjct: 61   GSSFIYILIYVDDIVITGSHAQELRKVTTKLAGKFSLKELGELSYFLGMEATRTEKGLHL 120

Query: 398  NQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFSSPSVYRSTIGALQYLTLTRP 577
             Q KY  D+L  A M D KP  TP +S+Q L+L      S PS YR  +G+LQYL LTRP
Sbjct: 121  TQTKYITDLLRRAKMADAKPVATPMSSTQVLTLNSGDLLSDPSEYRVIVGSLQYLGLTRP 180

Query: 578  DLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQMQLQGFSDADWAGS 757
            D+AF VN+LSQF+H PT  HW A KRVLRY+ GT    I F       L  +SDADWAG 
Sbjct: 181  DIAFPVNRLSQFMHQPTSTHWEAAKRVLRYLAGTADKGIFFSANTPFNLHAYSDADWAGD 240

Query: 758  IDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATSDFLWIKSVFHELGI 937
             DD  ST  + ++ G   +SWS+KKQ  VARSSTE+EYR+L  A ++ +W++SV  ELGI
Sbjct: 241  HDDYNSTGAYIVYLGRQPISWSAKKQGGVARSSTEAEYRALTEAAAELMWVQSVMSELGI 300

Query: 938  PISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKEVEVRYLSSEDQLAD 1117
              ++  +L+CDN  A  L++NPVFH+R KH+ +D HF+R++VQ K++ V ++SS DQLAD
Sbjct: 301  KSTDTPVLYCDNIGATYLSANPVFHSRMKHLALDYHFVRQQVQAKKLRVTHISSVDQLAD 360

Query: 1118 ALTKPLPAHRFQQLCSKFTM 1177
            ALTKPL   RF+ L SK  +
Sbjct: 361  ALTKPLARSRFETLTSKIEL 380


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  372 bits (954), Expect = e-113
 Identities = 180/382 (47%), Positives = 248/382 (64%), Gaps = 2/382 (0%)
 Frame = +2

Query: 2    AFLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXX 181
            AFLHG L+E VYM QP GF  S+KP +VCKL KA+YGLKQAP+AW               
Sbjct: 1049 AFLHGFLEEEVYMQQPPGFESSSKPDYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEA 1108

Query: 182  XXXXXXXXYRRTGSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLG 361
                    +   G                    K  + +++ L++ F+LK LG++ YFLG
Sbjct: 1109 SKADTSLFFLNKGGILMFVLVYVDDIIVASSTEKATTALLKDLNKEFALKDLGDLHYFLG 1168

Query: 362  LEVHKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFSSPSV--YR 535
            +EV K+ NG++L Q+KYA D+L   NM +CKP  TP + S+KL+L + +P        YR
Sbjct: 1169 IEVTKVSNGVILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDAIQYR 1228

Query: 536  STIGALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQ 715
            S +GALQYLTLTRPD+A+ VNK+ QFLH+PT +HW A KR+LRY+    S  +  H    
Sbjct: 1229 SIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLHIHKSAS 1288

Query: 716  MQLQGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATS 895
              + G+SDADWAGSIDDRKST GF +F G N+VSWS++KQ  V+RSSTE+EY+++A+ T+
Sbjct: 1289 TLVHGYSDADWAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTA 1348

Query: 896  DFLWIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKE 1075
            + +W++++  ELGI   + + +WCDN  A  L++NPVFHARTKHIE+D HF+RE+V  K 
Sbjct: 1349 ELIWVQTLLKELGIESPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKL 1408

Query: 1076 VEVRYLSSEDQLADALTKPLPA 1141
            +E+ ++ S DQ+AD  TK L A
Sbjct: 1409 LEIDFVPSGDQVADGFTKALSA 1430


>gb|KYP75364.1| Copia protein [Cajanus cajan]
          Length = 702

 Score =  355 bits (912), Expect = e-112
 Identities = 176/396 (44%), Positives = 245/396 (61%)
 Frame = +2

Query: 2    AFLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXX 181
            AFL+G L+ETV+MHQP GF D  KP HVCK +KAIYGLKQAP+AW               
Sbjct: 287  AFLNGYLKETVFMHQPEGFTDPNKPHHVCKFIKAIYGLKQAPRAWFDRLKKALLRWGFQN 346

Query: 182  XXXXXXXXYRRTGSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLG 361
                    + R  ++             TG ++  +   I+ L+  F+LK LG++ YFLG
Sbjct: 347  TRSDSSLFFLRGENHITFLLIYVDDIIVTGSNTNFLQAFIKQLNVVFALKDLGKLHYFLG 406

Query: 362  LEVHKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFSSPSVYRST 541
            +EVH+   G+ L Q KY  DIL    M     C TP  + +  +  +  P  +P+++R  
Sbjct: 407  IEVHRDSGGMFLKQIKYIADILKKFKMDRASSCPTPMVTGRSFT-NEGEPMKNPTIFRQA 465

Query: 542  IGALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQMQ 721
            IGALQYLT +RPD+A+ VNKL Q++ +PT +HW   KR+LRY+ GT+++ +       + 
Sbjct: 466  IGALQYLTNSRPDIAYSVNKLCQYMSAPTDDHWQGIKRILRYLCGTINHCLHIKSSADLD 525

Query: 722  LQGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATSDF 901
            + GFSDA WA SIDDRKS +G C+F G ++++WSS+KQ VV+RSSTESEYR+L    ++ 
Sbjct: 526  IAGFSDAYWAISIDDRKSIAGQCVFLGESLIAWSSRKQKVVSRSSTESEYRALVDLAAEV 585

Query: 902  LWIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKEVE 1081
             WIKS+  E+ +P+    +LWCDN SA +LASNPV HAR+KHIE+D HFIR++V   ++ 
Sbjct: 586  KWIKSLLQEIKLPMPRKPILWCDNLSAKALASNPVMHARSKHIEVDIHFIRDQVLQNQIS 645

Query: 1082 VRYLSSEDQLADALTKPLPAHRFQQLCSKFTMRTPP 1189
            + Y+ S DQ+AD LTK L   RF QL  K  +   P
Sbjct: 646  IAYVPSSDQIADCLTKALTHSRFSQLRDKLGVVQSP 681


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  370 bits (951), Expect = e-112
 Identities = 177/380 (46%), Positives = 249/380 (65%), Gaps = 2/380 (0%)
 Frame = +2

Query: 2    AFLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXX 181
            AFLHG L+E VYM QP GF   +KP++VCKL KA+YGLKQAP+AW               
Sbjct: 1040 AFLHGFLEEEVYMQQPPGFESFSKPNYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEA 1099

Query: 182  XXXXXXXXYRRTGSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLG 361
                    +   G                    K  + +++ L++ F+LK LG++ YFLG
Sbjct: 1100 SKADTSLFFLNKGGIIMFVLVYVDDIIIASSTEKATTALLKDLNKEFALKDLGDLHYFLG 1159

Query: 362  LEVHKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPF--SSPSVYR 535
            +EV K+ NG++L Q+KYA D+L   NM +CKP  TP + S+KL+L + +P   +  + YR
Sbjct: 1160 IEVTKVPNGIVLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYR 1219

Query: 536  STIGALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQ 715
            S +GALQYLTLTRPD+A+ VNK+ QFLH+PT +HW A KR+LRY+    S  +  H    
Sbjct: 1220 SIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTDHWTAVKRILRYLNQCTSLGLNIHKSAS 1279

Query: 716  MQLQGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATS 895
              + G+SDADWAGS+DDRKST GF +F G N+VSWS++KQ  V+RSSTE+EY+++A+ T+
Sbjct: 1280 TLVHGYSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTA 1339

Query: 896  DFLWIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKE 1075
            + +W++++  ELGI   + + +WCDN  A  L++NPVFHARTKHIE+D HF+RE+V  K 
Sbjct: 1340 ELIWVQTLLRELGIDSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKL 1399

Query: 1076 VEVRYLSSEDQLADALTKPL 1135
            +E+ ++ S DQ+AD  TK L
Sbjct: 1400 LEIDFVPSGDQVADGFTKAL 1419


>gb|KYP45104.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 512

 Score =  349 bits (895), Expect = e-112
 Identities = 176/390 (45%), Positives = 241/390 (61%), Gaps = 1/390 (0%)
 Frame = +2

Query: 2    AFLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXX 181
            AFLHGDL+E +YM QP GF+       VCKL K++YGLKQ+P+AW               
Sbjct: 113  AFLHGDLEEEIYMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIR 172

Query: 182  XXXXXXXXYRRTGSNXXXXXXXXXXXXX-TGDDSKDISLVIQALDRHFSLKHLGEVQYFL 358
                    +RR+ ++              TGDD + I  + Q L +HF  K LG ++YFL
Sbjct: 173  CETDHSVFFRRSSTHRFIYLVVYVDDIVITGDDQEGIKALKQHLFKHFQTKDLGPLRYFL 232

Query: 359  GLEVHKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPFSSPSVYRS 538
            G+EV + ++G+ ++Q+KYA+DIL    + DCKP DTP + + KL      P+  P  YR 
Sbjct: 233  GIEVAQSKSGIAISQRKYALDILEETGLTDCKPVDTPMDPNVKLMPNQGEPYPDPGRYRR 292

Query: 539  TIGALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQM 718
             +G L YLT+TRPD++F V+ +SQFL+SP  +HW A  R+LRYIK +    + ++     
Sbjct: 293  LVGKLNYLTMTRPDISFPVSVVSQFLNSPCESHWLAVVRILRYIKRSPGKGLVYNDRGHT 352

Query: 719  QLQGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATSD 898
             + G+SDADWAG   DR+STSG+C+F G N+VSW SKKQSVVARSSTE+EYR++A  T +
Sbjct: 353  NIVGYSDADWAGDASDRRSTSGYCVFMGGNLVSWKSKKQSVVARSSTEAEYRAMAHTTCE 412

Query: 899  FLWIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKEV 1078
             LW+K +  EL         L CDN SA+ L+SNPVFH RTKHIE+D HFIREK+ +  +
Sbjct: 413  LLWLKFLIQELQFCKVGHMELVCDNQSALYLSSNPVFHERTKHIEVDCHFIREKILSGII 472

Query: 1079 EVRYLSSEDQLADALTKPLPAHRFQQLCSK 1168
            +   + S+DQLAD  TK L   R   +C+K
Sbjct: 473  KTSSVCSKDQLADIFTKSLRGPRITYICNK 502


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  367 bits (941), Expect = e-112
 Identities = 176/386 (45%), Positives = 247/386 (63%), Gaps = 2/386 (0%)
 Frame = +2

Query: 2    AFLHGDLQETVYMHQPAGFIDSAKPSHVCKLVKAIYGLKQAPKAWTXXXXXXXXXXXXXX 181
            AFLHG L+E VYM QP G+ DS+ P +VCKL KA+YGLKQAP+AW               
Sbjct: 851  AFLHGVLEEEVYMKQPPGYEDSSLPGYVCKLDKALYGLKQAPRAWYSRLSKKLYDMGFQG 910

Query: 182  XXXXXXXXYRRTGSNXXXXXXXXXXXXXTGDDSKDISLVIQALDRHFSLKHLGEVQYFLG 361
                    +   G               T    + +  +++ L + F+LK LG++ YFLG
Sbjct: 911  SKADTSLFFYNKGDLIIFVLIYVDDIIVTSSRQEAVPALLRDLQKEFALKDLGDLHYFLG 970

Query: 362  LEVHKIQNGLLLNQKKYAVDILSAANMLDCKPCDTPYNSSQKLSLGDSAPF--SSPSVYR 535
            +EV K+  G++L Q KY  D+L   NM DCKP  TP ++S+KLS+ +  P   +  + YR
Sbjct: 971  IEVTKVSGGIVLTQDKYVNDLLRRVNMFDCKPVSTPLSTSEKLSINEGDPLGPNDATHYR 1030

Query: 536  STIGALQYLTLTRPDLAFVVNKLSQFLHSPTVNHWGACKRVLRYIKGTLSYSITFHPCLQ 715
            S +GALQYLTLTRPD+AF VNK+ QFLH+PT +HW A KR+LRY+K      +       
Sbjct: 1031 SVVGALQYLTLTRPDIAFPVNKVCQFLHAPTTHHWAAVKRILRYLKQCTRLGLKLSKSRS 1090

Query: 716  MQLQGFSDADWAGSIDDRKSTSGFCIFFGPNIVSWSSKKQSVVARSSTESEYRSLASATS 895
            M +  +SDADWAGS+DDR+ST GF +F G N+VSWS++KQ+ V+RSSTESEY++LA+AT+
Sbjct: 1091 MLVSAYSDADWAGSLDDRRSTGGFAVFLGDNLVSWSARKQATVSRSSTESEYKALANATA 1150

Query: 896  DFLWIKSVFHELGIPISEPSLLWCDNASAISLASNPVFHARTKHIEIDAHFIREKVQNKE 1075
            + +W++++  EL +     + LWCDN  A  L++NPVFHARTKHIE+D HF+RE+V  K 
Sbjct: 1151 EIMWVQTLLAELQVESPSMAKLWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSRKL 1210

Query: 1076 VEVRYLSSEDQLADALTKPLPAHRFQ 1153
            +E+ ++ + DQ+AD  TK L   + +
Sbjct: 1211 LEIDFVPTGDQVADGFTKALSVRQLE 1236