BLASTX nr result
ID: Rehmannia27_contig00018722
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00018722
(1033 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AJE29370.1| putative gag protein [Coffea canephora] 72 3e-19
ref|XP_010277638.1| PREDICTED: uncharacterized protein LOC104612... 50 1e-17
ref|XP_007034896.1| Uncharacterized protein TCM_020722 [Theobrom... 50 3e-12
ref|XP_007046118.1| Uncharacterized protein TCM_011728 [Theobrom... 53 1e-11
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo... 42 5e-11
ref|XP_007026864.1| Adenine nucleotide alpha hydrolases-like sup... 50 7e-11
ref|XP_007010124.1| Uncharacterized protein TCM_043452 [Theobrom... 61 4e-10
ref|XP_011459790.1| PREDICTED: uncharacterized protein LOC105350... 40 6e-10
ref|XP_007024836.1| Leucine-rich repeat transmembrane protein ki... 46 1e-09
ref|XP_010277636.1| PREDICTED: uncharacterized protein LOC104612... 47 2e-09
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 41 4e-09
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 38 5e-09
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 40 7e-09
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 40 9e-09
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 40 9e-09
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group] 41 9e-09
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 40 2e-08
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] 40 2e-08
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] 39 3e-08
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 39 4e-08
>gb|AJE29370.1| putative gag protein [Coffea canephora]
Length = 433
Score = 72.4 bits (176), Expect(2) = 3e-19
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = -1
Query: 880 LTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRI 722
LT+S +TSSRD WILDSGC+ HV SR DYFD LQ ++AG + GDGSTC++
Sbjct: 269 LTISKGNNTSSRDGWILDSGCVSHVCSRLDYFDTLQRKKAGFMCLGDGSTCQV 321
Score = 51.6 bits (122), Expect(2) = 3e-19
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDS 606
+GVVKIKM +G R+LGGVAYVPK+R NLIS Q+DS
Sbjct: 324 VGVVKIKMLNGEIRSLGGVAYVPKLRRNLISLNQLDS 360
>ref|XP_010277638.1| PREDICTED: uncharacterized protein LOC104612030 [Nelumbo nucifera]
Length = 201
Score = 50.4 bits (119), Expect(3) = 1e-17
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = -1
Query: 880 LTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIM 719
L VS + S + W+LD GC MH++ R++YFD Q ++ ++ GD STC IM
Sbjct: 12 LIVSEGMCYFSPNEWVLDFGCSMHIFFRKEYFDTFQERKTCVVSLGDESTCNIM 65
Score = 47.0 bits (110), Expect(3) = 1e-17
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSCDI 591
+G +KIKM D V TLGG YV KM NLIS Q+DS C +
Sbjct: 67 VGTMKIKMFDRVVHTLGGATYVSKMCRNLISLSQLDSKECKV 108
Score = 40.8 bits (94), Expect(3) = 1e-17
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 26/93 (27%)
Frame = -2
Query: 606 QQLRYSAGGGVLKITHGGRVLRVREKYRNLYRLV----------------------TSRI 493
++ + A GG +KIT G VL EK + LY LV T R+
Sbjct: 104 KECKVFAAGGAIKITRGDMVLMKEEKCKGLYHLVKSTIVPKTLMGCWKRNVQXSVATRRV 163
Query: 492 TGSGSVPEE---FQGIDGCEGN-PVGREEGLRS 406
+ + V FQGID E P+GREEG RS
Sbjct: 164 SFADKVETSAASFQGIDDGEKKIPIGREEGSRS 196
>ref|XP_007034896.1| Uncharacterized protein TCM_020722 [Theobroma cacao]
gi|508713925|gb|EOY05822.1| Uncharacterized protein
TCM_020722 [Theobroma cacao]
Length = 218
Score = 50.4 bits (119), Expect(3) = 3e-12
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 5/46 (10%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDS-----NSCD 594
+ VVKIKM DGV +LGGVAYVPKMR NLIS +DS ++CD
Sbjct: 90 LAVVKIKMFDGVVLSLGGVAYVPKMRKNLISLSLLDSKGYGYSACD 135
Score = 37.0 bits (84), Expect(3) = 3e-12
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = -1
Query: 880 LTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIMRL 713
LT+S +D + W LDS H+ ++D FDLLQ AG L G+ S ++M L
Sbjct: 37 LTISEDMDANFD--WYLDSASATHICYQKDCFDLLQEGMAGNLTLGNKSIVKVMGL 90
Score = 32.7 bits (73), Expect(3) = 3e-12
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Frame = -2
Query: 594 YSAGGGVLKITHGGRVLRVREKYRNLYRLVT------SRITGSGSVPEEFQGIDGCEGNP 433
YSA GV+K+T G VL + LYRL + TG GS E ++ +
Sbjct: 131 YSACDGVVKVTQGDMVLMRGNLHNGLYRLECEASKGWEQCTGDGSYQSEISFVEEVMKDS 190
Query: 432 VGREEGLRS 406
G ++G R+
Sbjct: 191 HGVDDGERT 199
>ref|XP_007046118.1| Uncharacterized protein TCM_011728 [Theobroma cacao]
gi|508710053|gb|EOY01950.1| Uncharacterized protein
TCM_011728 [Theobroma cacao]
Length = 176
Score = 53.1 bits (126), Expect(3) = 1e-11
Identities = 30/46 (65%), Positives = 34/46 (73%), Gaps = 5/46 (10%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDS-----NSCD 594
I VVKIKM DGV R+LGGVAYVPKMR NLIS +DS ++CD
Sbjct: 48 IRVVKIKMFDGVVRSLGGVAYVPKMRKNLISLSLLDSKGFGYSACD 93
Score = 34.3 bits (77), Expect(3) = 1e-11
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -1
Query: 838 WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIMRLEW*KSK 695
W LDS H+ ++D FDLLQ AG L G+ S ++M + K K
Sbjct: 7 WYLDSASATHICYQKDCFDLLQEGVAGNLTLGNKSIVKVMGIRVVKIK 54
Score = 30.8 bits (68), Expect(3) = 1e-11
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Frame = -2
Query: 594 YSAGGGVLKITHGGRVLRVREKYRNLYRLVT------SRITGSGSVPEEFQGIDGCEGNP 433
YSA GV+K+T G VL + LYRL + TG GS E +
Sbjct: 89 YSACDGVVKVTQGDMVLMRGNLHNGLYRLECEASKGWEQCTGDGSYQSEISFAEEVMKGS 148
Query: 432 VGREEGLRS 406
G ++G R+
Sbjct: 149 HGVDDGERT 157
>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 42.0 bits (97), Expect(3) = 5e-11
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = -1
Query: 874 VSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRI 722
+S D S+ WILDSGC H+ +D F L+ +G++ G+ + C+I
Sbjct: 275 ISVSSDKRSKTEWILDSGCTFHMCPYKDLFTTLEPVDSGVVLMGNDTQCKI 325
Score = 37.4 bits (85), Expect(3) = 5e-11
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSCDIQLE 582
IG ++IK DG +TL V ++P ++ NLIS ++S C E
Sbjct: 328 IGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAE 372
Score = 36.2 bits (82), Expect(3) = 5e-11
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -2
Query: 597 RYSAGGGVLKITHGGRVLRVREKYRNLYRLVTSRITGSGSVPEEFQGID 451
+YSA GGVLK++ G VL + +LY L S +TGS +V D
Sbjct: 368 KYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKD 416
>ref|XP_007026864.1| Adenine nucleotide alpha hydrolases-like superfamily protein
[Theobroma cacao] gi|508715469|gb|EOY07366.1| Adenine
nucleotide alpha hydrolases-like superfamily protein
[Theobroma cacao]
Length = 434
Score = 50.4 bits (119), Expect(3) = 7e-11
Identities = 28/44 (63%), Positives = 32/44 (72%), Gaps = 5/44 (11%)
Frame = -3
Query: 710 VVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDS-----NSCD 594
VVKIKM DGV R+LGGVAYVPKM NLIS +DS ++CD
Sbjct: 308 VVKIKMFDGVVRSLGGVAYVPKMHKNLISLSLLDSKGYGYSACD 351
Score = 35.8 bits (81), Expect(3) = 7e-11
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -1
Query: 907 GDSCGSWRYLTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTC 728
GD+C LT+S +D +S W LD H+ +++ FDLLQ G L G+ S
Sbjct: 247 GDNCD---VLTISENMDANSD--WYLDFASATHICYQKNCFDLLQEGVTGNLTLGNKSIV 301
Query: 727 RIMRL 713
++M L
Sbjct: 302 KVMGL 306
Score = 28.9 bits (63), Expect(3) = 7e-11
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Frame = -2
Query: 594 YSAGGGVLKITHGGRVLRVREKYRNLYRLVT------SRITGSGSVPEEFQGIDGCEGNP 433
YSA GV+K+T G VL + LY L + TG GS E + +
Sbjct: 347 YSACDGVVKVTQGDMVLMRGNLHNGLYHLECEASKGWEQCTGDGSYQSEISLAEEVMKDS 406
Query: 432 VGREEGLRS 406
G ++G R+
Sbjct: 407 HGVDDGERT 415
>ref|XP_007010124.1| Uncharacterized protein TCM_043452 [Theobroma cacao]
gi|508727037|gb|EOY18934.1| Uncharacterized protein
TCM_043452 [Theobroma cacao]
Length = 166
Score = 60.8 bits (146), Expect(2) = 4e-10
Identities = 36/61 (59%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSCDIQL--EVES*KSHMAEGS* 543
IGVVKIKM DGV R+LGGVAYVPKMR NLIS +DS DI L V+ MA+
Sbjct: 48 IGVVKIKMFDGVVRSLGGVAYVPKMRKNLISLSLLDSKGSDITLFFNVKGNNQQMADSEE 107
Query: 542 G 540
G
Sbjct: 108 G 108
Score = 32.3 bits (72), Expect(2) = 4e-10
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 838 WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIM 719
W LDS H+ ++D FDLLQ G L G+ S ++M
Sbjct: 7 WYLDSASATHICYQKDCFDLLQEVVVGNLTLGNKSIVKVM 46
>ref|XP_011459790.1| PREDICTED: uncharacterized protein LOC105350096 [Fragaria vesca
subsp. vesca]
Length = 201
Score = 39.7 bits (91), Expect(3) = 6e-10
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = -1
Query: 883 YLTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIM 719
+L VS T S+ WILD+G H+ RR+YFD Q + G + GDG+ R+M
Sbjct: 14 FLMVSKGKYTCSQRDWILDTGSSNHLCFRREYFDTFQ-EVKGFVTWGDGTRRRVM 67
Score = 38.9 bits (89), Expect(3) = 6e-10
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDS 606
+G VK+KM DG +LG V +VP R NL S Q+DS
Sbjct: 69 VGTVKVKMFDGAVCSLGDVVFVPTFRRNLKSLSQLDS 105
Score = 33.5 bits (75), Expect(3) = 6e-10
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 23/93 (24%)
Frame = -2
Query: 597 RYSAGGGVLKITHGGRVLRVREKYRNLYRLV----TSRITGSGSVPEE-------FQGI- 454
R S+ GGV+K++ G VL EK +++RL+ TS++ G E F GI
Sbjct: 109 RVSSAGGVMKVSRGFMVLMKGEKCGSMFRLIGKTQTSKVVGKQCAQESRYLRQVLFAGIA 168
Query: 453 -----------DGCEGNPVGREEGLRSSLSAVN 388
DG + NP REE SL VN
Sbjct: 169 KRAGTSFQVSDDGEKVNP-AREEVKTRSLFRVN 200
>ref|XP_007024836.1| Leucine-rich repeat transmembrane protein kinase [Theobroma cacao]
gi|508780202|gb|EOY27458.1| Leucine-rich repeat
transmembrane protein kinase [Theobroma cacao]
Length = 1179
Score = 45.8 bits (107), Expect(3) = 1e-09
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -3
Query: 710 VVKIKMGDGVDRTLGGVAYVPKMRMNLIS 624
VVKIKM DGV R+L G+AYVPKMR NLIS
Sbjct: 1078 VVKIKMFDGVVRSLDGMAYVPKMRKNLIS 1106
Score = 41.6 bits (96), Expect(3) = 1e-09
Identities = 28/71 (39%), Positives = 38/71 (53%)
Frame = -1
Query: 907 GDSCGSWRYLTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTC 728
GD C LT+S +D +S W L+S H+ ++D FDLLQ AG L G+ S
Sbjct: 1017 GDDCD---VLTISENMDANSY--WYLNSASATHICYQKDCFDLLQEGVAGNLTLGNKSIV 1071
Query: 727 RIMRLEW*KSK 695
++M LE K K
Sbjct: 1072 KVMGLEVVKIK 1082
Score = 23.1 bits (48), Expect(3) = 1e-09
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 594 YSAGGGVLKITHGGRVLRVREKYRNLYRL 508
YSA GV+K+T VL + LY L
Sbjct: 1117 YSACDGVVKVTQRDMVLMRGNLHNGLYHL 1145
>ref|XP_010277636.1| PREDICTED: uncharacterized protein LOC104612027 [Nelumbo nucifera]
Length = 276
Score = 47.0 bits (110), Expect(3) = 2e-09
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSCDI 591
+G +KIKM D V TLGG YV KM NLIS Q+DS C +
Sbjct: 142 VGTMKIKMFDRVVHTLGGATYVSKMCRNLISLSQLDSKECKV 183
Score = 32.7 bits (73), Expect(3) = 2e-09
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 26/93 (27%)
Frame = -2
Query: 606 QQLRYSAGGGVLKITHGGRVLRVREKYRNLYRLV----------------------TSRI 493
++ + A GG +KIT VL EK + LY LV T R+
Sbjct: 179 KECKVFAVGGAIKITRANMVLMKEEKCKGLYHLVKRTIVPKTLMGCWKRNVQGSIATRRV 238
Query: 492 TGSGSVPEE---FQGIDGCEGN-PVGREEGLRS 406
+ + V F GID E +GREEG RS
Sbjct: 239 SFANKVETSVAIFHGIDDGEKKIHIGREEGSRS 271
Score = 30.8 bits (68), Expect(3) = 2e-09
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 802 SRRDYFDLLQLQRAGILFSGDGSTCRIMRL 713
S+++YFD Q ++ ++ GD STC IM +
Sbjct: 113 SKKEYFDTFQERKTCVVSLGDESTCNIMNV 142
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
subsp. vulgaris]
Length = 2676
Score = 41.2 bits (95), Expect(3) = 4e-09
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSC 597
IG V I M DG RTL V +VP+M+ NLIS +D+N C
Sbjct: 333 IGSVDITMFDGTVRTLSKVRHVPEMKKNLISLGTLDNNGC 372
Score = 37.4 bits (85), Expect(3) = 4e-09
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 850 SRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIM 719
S+ WI+DSGC HV +D F + G + G+ +TC+++
Sbjct: 288 SKSEWIMDSGCSFHVTPYKDMFTSYEEFNGGTVTMGNNATCKVV 331
Score = 30.4 bits (67), Expect(3) = 4e-09
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 597 RYSAGGGVLKITHGGRVLRVREKYRNLYRLVTSRITGSGSV 475
+Y A GGVL + G VL K +LY L S ++GS +V
Sbjct: 373 KYIAEGGVLNVIRGALVLMKGIKRGSLYVLQGSMVSGSANV 413
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 38.1 bits (87), Expect(3) = 5e-09
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 609
IG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 250 IGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLD 285
Score = 37.0 bits (84), Expect(3) = 5e-09
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 844 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRI 722
D WILD+ C H+ RD+F + + G + GD + C +
Sbjct: 207 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEV 247
Score = 33.5 bits (75), Expect(3) = 5e-09
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 597 RYSAGGGVLKITHGGR-VLRVREKYRNLYRLVTSRITGS 484
+YS G G+LK+T G V++ KY NLY L + I G+
Sbjct: 290 KYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGN 328
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 39.7 bits (91), Expect(3) = 7e-09
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 609
IG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 341 IGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376
Score = 37.7 bits (86), Expect(3) = 7e-09
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 844 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRI 722
D WILD+ C H+ RD+F ++ + G + GD + C +
Sbjct: 298 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEV 338
Score = 30.8 bits (68), Expect(3) = 7e-09
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 597 RYSAGGGVLKITHGGR-VLRVREKYRNLYRLVTSRITGS 484
+YS G G+LK+T G V++ K NLY L + I G+
Sbjct: 381 KYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGN 419
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 39.7 bits (91), Expect(3) = 9e-09
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 609
IG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 326 IGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 361
Score = 37.7 bits (86), Expect(3) = 9e-09
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 844 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRI 722
D WILD+ C H+ RD+F ++ + G + GD + C +
Sbjct: 283 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEV 323
Score = 30.4 bits (67), Expect(3) = 9e-09
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 597 RYSAGGGVLKITHGGR-VLRVREKYRNLYRLVTSRITGS 484
+YS G G+LK+T G V++ K NLY L + I G+
Sbjct: 366 KYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGN 404
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 39.7 bits (91), Expect(3) = 9e-09
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 609
IG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 158 IGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 193
Score = 37.7 bits (86), Expect(3) = 9e-09
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 844 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRI 722
D WILD+ C H+ RD+F ++ + G + GD + C +
Sbjct: 115 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEV 155
Score = 30.4 bits (67), Expect(3) = 9e-09
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 597 RYSAGGGVLKITHGGR-VLRVREKYRNLYRLVTSRITGS 484
+YS G G+LK+T G V++ K NLY L + I G+
Sbjct: 198 KYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGN 236
>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
Length = 778
Score = 40.8 bits (94), Expect(3) = 9e-09
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 609
IG V+IKM DG RTL V ++P ++ +LIS+C +D
Sbjct: 307 IGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLD 342
Score = 37.0 bits (84), Expect(3) = 9e-09
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 844 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRI 722
D WILD+ C H+ RD+F + + G + GD + C +
Sbjct: 264 DQWILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEV 304
Score = 30.0 bits (66), Expect(3) = 9e-09
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 597 RYSAGGGVLKITHGGR-VLRVREKYRNLYRLVTSRITGS 484
+YS G G+LK+T G V++ K NLY L + I G+
Sbjct: 347 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGN 385
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 39.7 bits (91), Expect(3) = 2e-08
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 609
IG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 548 IGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 583
Score = 37.0 bits (84), Expect(3) = 2e-08
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 844 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRI 722
D WIL++ CI H+ RD+F + + G + GD + C +
Sbjct: 505 DQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEV 545
Score = 30.0 bits (66), Expect(3) = 2e-08
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 597 RYSAGGGVLKITHGGR-VLRVREKYRNLYRLVTSRITGS 484
+YS G G+LK+T G V++ K NLY L + I G+
Sbjct: 588 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGN 626
>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
Length = 1601
Score = 39.7 bits (91), Expect(3) = 2e-08
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 609
IG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 341 IGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376
Score = 37.0 bits (84), Expect(3) = 2e-08
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 844 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRI 722
D WIL++ CI H+ RD+F + + G + GD + C +
Sbjct: 298 DQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEV 338
Score = 30.0 bits (66), Expect(3) = 2e-08
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 597 RYSAGGGVLKITHGGR-VLRVREKYRNLYRLVTSRITGS 484
+YS G G+LK+T G V++ K NLY L + I G+
Sbjct: 381 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGN 419
>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
Length = 344
Score = 38.5 bits (88), Expect(3) = 3e-08
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSC 597
I ++IKM G+ RTL V +VPK+ NLI +DSN C
Sbjct: 276 IHXIQIKMHGGIIRTLTNVRHVPKLNKNLIFLRTLDSNGC 315
Score = 37.4 bits (85), Expect(3) = 3e-08
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 856 TSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIM 719
T+S D WILDSGC H+ D+F Q G + G+ C+++
Sbjct: 229 TNSDDEWILDSGCSYHMSPNGDWFSTYQPIDGGKVLMGNKVACKVV 274
Score = 30.4 bits (67), Expect(3) = 3e-08
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 594 YSAGGGVLKITHGGRVLRVREKYRNLY 514
Y AGGGVL+++ GG V+ +K LY
Sbjct: 317 YKAGGGVLRVSKGGLVVMNGKKINGLY 343
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 38.5 bits (88), Expect(3) = 4e-08
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -3
Query: 716 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 609
IG+V+IKM DG TL V ++P ++ +LIS C +D
Sbjct: 173 IGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLD 208
Score = 37.0 bits (84), Expect(3) = 4e-08
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 844 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRI 722
D WILD+ C H+ RD+F + + G + GD + C +
Sbjct: 130 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEV 170
Score = 30.0 bits (66), Expect(3) = 4e-08
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 597 RYSAGGGVLKITHGGR-VLRVREKYRNLYRLVTSRITGS 484
+YS G G+LK+T G V++ K NLY L + I G+
Sbjct: 213 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGN 251