BLASTX nr result
ID: Rehmannia27_contig00017301
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00017301
(3608 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo... 882 0.0
gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposo... 872 0.0
gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposo... 865 0.0
gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposo... 855 0.0
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 851 0.0
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo... 848 0.0
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 841 0.0
gb|KYP37906.1| Retrovirus-related Pol polyprotein from transposo... 827 0.0
gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposo... 835 0.0
gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposo... 834 0.0
gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposo... 823 0.0
gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposo... 834 0.0
gb|KYP70921.1| Retrovirus-related Pol polyprotein from transposo... 825 0.0
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera] 813 0.0
gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposo... 807 0.0
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 820 0.0
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera] 805 0.0
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 817 0.0
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 797 0.0
gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposo... 792 0.0
>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1316
Score = 882 bits (2278), Expect = 0.0
Identities = 476/1152 (41%), Positives = 663/1152 (57%), Gaps = 18/1152 (1%)
Frame = +3
Query: 147 KSKEERAKLICEHCGFHGHEIKECFKLHGYPDWYKELKEQRGNQSINMVEGGEMTQTKYK 326
K R + IC HCG GH I+ C++ HG+P K L ++ S+N G+ T+
Sbjct: 198 KGSSNRPRRICTHCGKTGHTIEVCYQKHGFPPGSKPLSDKTA--SVNHTVTGDCKVTE-- 253
Query: 327 GEEETRKIELPDFASMIQKEIAKYLSNQGSTQSGDIHSLSHFADYSGQSYNTHFALSLFH 506
STQS Q T F +
Sbjct: 254 -----------------------------STQS-----------LESQDVRTSFPIVCSA 273
Query: 507 TLGRDTWIVDTGASRHICASPELIDKITIMSTPVNVHLPDGTSMSVSHTGTVQLSDEITL 686
+WI+D+GA+ H+ +S + ++ P++V LP G + +H+GTV+ ++ L
Sbjct: 274 ISTPSSWILDSGATDHVSSSLSHFSSFSPIN-PIDVKLPTGQHVLATHSGTVKFTNSFYL 332
Query: 687 TNVLVVPSFKYNLLSVSQLLHGNGLECVFSQKQCWLQDPKNGRVKAVGRICGGLYLFGMT 866
+VL +P+F YNL+S+S+L+ + +F C +Q+ + + GLY F +
Sbjct: 333 VDVLYIPAFTYNLISISKLVSSLSCQLIFDHHSCIIQETNTMKKIGTVDVNEGLYSFTAS 392
Query: 867 EFSGSLTTGNTAN-------LQLWHRRLGHTSMSCMEHIVFLKSVCNKDIKYSCSTCHVA 1025
T + + LWH R+GH S ++ FL + D +SC+TCH A
Sbjct: 393 NIHHPSTNSVIVHPKCSIQPIDLWHFRMGHLSHERLQSFPFL----SVDTSFSCNTCHHA 448
Query: 1026 KQCRLTFPLSTIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYTRATWIYLMKKKS 1205
KQ +L FPLS + F+L+H+DIWGP +S+ Y LTIVDD+TR TW++LM+ KS
Sbjct: 449 KQKKLPFPLSHSYASQPFDLLHMDIWGPCSVTSMHGHKYFLTIVDDHTRFTWLFLMQNKS 508
Query: 1206 EAPMHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSCPYTPQQNG 1385
E H+ NF QF VK +RTDNG EF GI+HQ +C TPQQNG
Sbjct: 509 ETRQHIINFINQVETQFDKHVKVIRTDNGLEF---SMTQYFSSKGIIHQTTCVETPQQNG 565
Query: 1386 VVERKHRHILEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPFELLHKEPP 1565
+VERKH+H+L + R+L+FQ+ +P FW ++L+ ++N +P+ LH SPFE L+ P
Sbjct: 566 IVERKHQHLLNVTRSLLFQANLPSIFWCFALMHATFLINCIPTPFLHNISPFEKLYGHPC 625
Query: 1566 KYERFKVFGCLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNMNTGEIFLSRDVV 1745
VFGCLCY+ST H+ K D RA C+FLGF P KGY LFN++T + +SR+V+
Sbjct: 626 DISILCVFGCLCYSSTITSHRTKLDPRAHPCIFLGFKPHTKGYLLFNLHTHGLLVSRNVL 685
Query: 1746 FYETQFPFQAHP-SPLKDVPLPV----------PAHDIGEETEGTDTQDVEPTPPPPAQQ 1892
F+E FP P SP P+P+ P+ I E ++ T D +PPP
Sbjct: 686 FHEDHFPSFTKPHSPSFSSPVPIHYNYVDYPTFPSSSIVESSD-PPTSDQHSSPPP---- 740
Query: 1893 LGRGHRIKHKPAWLNDYVTNSIHTAHLIETPAESVKPTPYRLDCFPYTYSSILSPAYSAF 2072
L R R + P +L D+ H A + A S T R + +LSP++ +
Sbjct: 741 LRRSTRPRRPPTYLQDF-----HGAFTSTSTAHS--STGIRHPLHSFLSYDLLSPSFHHY 793
Query: 2073 LTQITESQSEPTTYGEAVQDKAWIEAMNRELLALEQNETWILTSLPPGKKAIGSKWVYKI 2252
+ I+ S +EP + EA + +W++AM+ E+ ALE N TW+LT+LPP K AIG +WVYK+
Sbjct: 794 VFSIS-SVTEPKNFAEASKSDSWLKAMHEEIFALEANNTWVLTTLPPHKTAIGCRWVYKV 852
Query: 2253 KRNSDGSVDRYKARLVAKGYLQVEGIDFMESFSPVAKLVSVRMIIALATQKNWELHHIDI 2432
K +DGS+DRYKARLVAKGY Q+EG+DF ++FSPVAKL +VR++++LA NW L +D+
Sbjct: 853 KHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLLSLAAINNWHLKQLDV 912
Query: 2433 NNAFLHGYLEEEVYMIPPEGYFKAKKGEVCLLKRSLYGLKQASRQWNLEFSQKLLSFGFI 2612
NNAFLHG L EEVYM P G + G+VC L+RSLYGLKQASRQW S L+ G++
Sbjct: 913 NNAFLHGDLNEEVYMQLPPGLTPSFPGQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYV 972
Query: 2613 QSTHDNCLFVKRTGDDFLALLIYVDDVLITGNSVTLIQSLKDYLHQLFTIKDLGNAKYFL 2792
S D+ LF+K + A+LIYVDD+++ GN +T I L LH F IKDLGN KYFL
Sbjct: 973 PSPSDHSLFLKCSPATTTAILIYVDDIVLAGNDLTEIHHLTSLLHTTFQIKDLGNLKYFL 1032
Query: 2793 GLEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSSTPFPQGYNISAQHSANFTDVEKYRR 2972
GLE+ R+ G HLCQRKY++DLL D GML KP STP ++SA TD YRR
Sbjct: 1033 GLEVARNHTGIHLCQRKYILDLLSDTGMLASKPVSTPMDYSMHLSASSGTPLTDTAAYRR 1092
Query: 2973 LVGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWDAAIHLLKYLKGTPSLGLYYSAESSN 3152
LVGRL+YL +RPDI++ VQQLSQFV P AH A +L+YLKGTP G++ S SS
Sbjct: 1093 LVGRLIYLTNTRPDITYAVQQLSQFVSNPTTAHRQALFRILRYLKGTPGSGIFLSVNSSV 1152
Query: 3153 KFEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXXXXXXXXXXXXXAEAEYRSMAATVCE 3332
+ AF D+DW C TR+S+TG+ ++ GD+L +EAEYR++A T CE
Sbjct: 1153 QLRAFSDSDWAGCPDTRRSITGFAVYLGDSLISWKSKKQITVSRSSSEAEYRALATTTCE 1212
Query: 3333 MQWLYNLSQDLHIAAPLPITLHCDNKAALHITANPVFHERTKHLDIDCHIVRNQYKLGFI 3512
+QWL L +D HI P L+CDN++AL I +NPVFHERTKH++IDCHIVR++ G +
Sbjct: 1213 LQWLSYLLKDFHIDPISPSILYCDNQSALQIASNPVFHERTKHIEIDCHIVRDKVSTGLL 1272
Query: 3513 NPVHISTVRQTA 3548
+ +S+ +Q A
Sbjct: 1273 KLLPVSSSQQLA 1284
>gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1423
Score = 872 bits (2254), Expect = 0.0
Identities = 474/1175 (40%), Positives = 692/1175 (58%), Gaps = 40/1175 (3%)
Frame = +3
Query: 144 RKSKEERAKLICEHCGFHGHEIKECFKLHGYPDWYKELKEQRGNQSINMVEGGEMTQTKY 323
+++K+ K +C HCG GH + C+K HG P +K + +N + T
Sbjct: 238 KRNKDYNTK-VCSHCGRIGHLVDSCYKKHGPPLQHKH------GRIVNQYQSVSDEDTDD 290
Query: 324 KGEEETRKIELPDFASMIQKE----IAKYLSNQGSTQSGDIHSLSHFADYSGQSYNTHFA 491
++++ + +M E + L GST S ++ L+ + S
Sbjct: 291 DQSVHSQRVVSHNSGNMFTPEQHQALLALLQQSGSTSSHSVNQLAGPSILSSPK-PPGMI 349
Query: 492 LSLFHTLGRDTWIVDTGASRHICASPELIDKITIMSTPVNVHLPDGTSMSVSHTGTVQLS 671
LS ++ D WI+DTGA+ H+C + + P+ + LP+G+ +S +GTV LS
Sbjct: 350 LSFPYSHNSDCWIIDTGATDHVCKNINFFQSYRRIK-PILIQLPNGSQVSTCVSGTVLLS 408
Query: 672 DEITLTNVLVVPSFKYNLLSVSQLLHGNGLECVFSQKQCWLQDPKNGRVKAVGRICGGLY 851
LT+VL +P+F +NL+SVS+L FS C +Q + R+ + GLY
Sbjct: 409 KTCYLTDVLFIPNFHFNLISVSKLAKTLSCTLTFSDSDCQIQANHSMRMIGAAELRAGLY 468
Query: 852 LFGMTEFSGSL--TTGN--TANLQLWHRRLGHTSMSCMEHIV--FLKSVCNKDIKYSCST 1013
+ S + T + T LWH RLGH S + + + + CNK I C
Sbjct: 469 AMVSSPESNVVHHCTSHFFTYQSDLWHLRLGHLSHDKLSALKGSYPEIQCNK-ISLPCEI 527
Query: 1014 CHVAKQCRLTFPLSTIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYTRATWIYLM 1193
CH+AK RL FP S +S++VF+LIHVDIWGP +S+ Y LTIVDD +R TWI+ M
Sbjct: 528 CHLAKHKRLPFPDSLTKSENVFDLIHVDIWGPLSVASIFGHKYFLTIVDDKSRFTWIFFM 587
Query: 1194 KKKSEAPMHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSCPYTP 1373
K K E + L+NF +F QFQ +K +RTDNG+EF+ ++ ++GI+HQ SC TP
Sbjct: 588 KNKFETKLLLQNFVSFVQTQFQQNIKTIRTDNGSEFL---LKDWYAKLGIVHQTSCVNTP 644
Query: 1374 QQNGVVERKHRHILEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPFELLH 1553
QQNGVVERKH+HIL +ARALMFQS V + FW Y++ VH++N LP+ L SP+ +L+
Sbjct: 645 QQNGVVERKHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFLQQNSPYYVLY 704
Query: 1554 KEPPKYERFKVFGCLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNMNTGEIFLS 1733
E P + KVFGCL +AST ++ K + R+ +C+FLG+ G KG+ ++++ T E F+S
Sbjct: 705 SEKPDFSHLKVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSSGTKGFIMYDLKTRETFIS 764
Query: 1734 RDVVFYETQFPFQAHPS---------PLKDVPL----PVPAH--DIGEETE--------- 1841
RDV FYE FP Q S P+ +PL P+P+H D +ETE
Sbjct: 765 RDVQFYENIFPLQKDFSIQSTDGPVVPIAQMPLTSCDPIPSHTHDNLDETEHEHNSSTLP 824
Query: 1842 -----GTDTQDVEPTPPPPAQQLGRGHRIKHKPAWLNDYVTNSIHTAHLIETPAESVKPT 2006
+D ++E P + R+K++P +L DY H +S
Sbjct: 825 MTNSSNSDQPNIEINIPEIRRT---SQRVKNRPGYLQDY-----HCTLAASKVDQSSSTA 876
Query: 2007 PYRL-DCFPYTYSSILSPAYSAFLTQITESQSEPTTYGEAVQDKAWIEAMNRELLALEQN 2183
Y + D PYT S + ++ + ++ I E P +Y +A+ W EA+ EL AL++
Sbjct: 877 RYPISDYLPYTSYSAVQQSFVSTISSIIE----PRSYQDAINHDCWKEAIRAELDALDKQ 932
Query: 2184 ETWILTSLPPGKKAIGSKWVYKIKRNSDGSVDRYKARLVAKGYLQVEGIDFMESFSPVAK 2363
+TWILT LPP K+A+G +WV+K+K ++DGSV+RYKARLVAKG+ Q+ G+D++++FSPV +
Sbjct: 933 KTWILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAKGFTQIPGLDYIDTFSPVVR 992
Query: 2364 LVSVRMIIALATQKNWELHHIDINNAFLHGYLEEEVYMIPPEGYFKAKKGEVCLLKRSLY 2543
+ ++R+ +A+A NW +H +DIN AFLHG L EEVYM PP G + +VC L++SLY
Sbjct: 993 MTTIRVFLAIAAASNWSVHQLDINTAFLHGDLVEEVYMKPPPGLILSSPNKVCKLQKSLY 1052
Query: 2544 GLKQASRQWNLEFSQKLLSFGFIQSTHDNCLFVKRTGDDFLALLIYVDDVLITGNSVTLI 2723
GLKQASRQWN++ ++ L FGF+QS D LF KRT F+A+L+YVDD++I+G+ T I
Sbjct: 1053 GLKQASRQWNIKLTETLKLFGFVQSKSDYSLFTKRTNIGFIAILVYVDDLIISGSDETEI 1112
Query: 2724 QSLKDYLHQLFTIKDLGNAKYFLGLEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSSTP 2903
+K L + F+IKDLG YFLGLE RS +G +CQRKY ++LL+D G+L KP STP
Sbjct: 1113 MKVKRLLDKQFSIKDLGQLSYFLGLEFSRSDQGISVCQRKYALELLQDTGLLASKPCSTP 1172
Query: 2904 FPQGYNISAQHSANFTDVEKYRRLVGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWDAA 3083
+ ++D YRRLVGRL+YL +RPD++F V +LSQF+H P AH+ AA
Sbjct: 1173 MDHTTRLHHDPLDLYSDPSSYRRLVGRLIYLTHTRPDLAFAVGKLSQFMHQPNNAHFQAA 1232
Query: 3084 IHLLKYLKGTPSLGLYYSAESSNKFEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXXXX 3263
+L+Y+K TP+ GL++ + S K + D+DW TC +R+S++G+C F G+AL
Sbjct: 1233 RKVLRYVKATPTKGLFFPSSSDLKLTGYTDSDWATCPDSRRSISGFCFFLGNALVSWKSK 1292
Query: 3264 XXXXXXXXXAEAEYRSMAATVCEMQWLYNLSQDLHIAAPLPITLHCDNKAALHITANPVF 3443
+EAEYR++A VCE QWL+ L D + +PI+L CDN++AL+I ANPVF
Sbjct: 1293 KQNVVSRSSSEAEYRALALGVCEAQWLHKLLTDFQLQDLIPISLFCDNQSALYIAANPVF 1352
Query: 3444 HERTKHLDIDCHIVRNQYKLGFINPVHISTVRQTA 3548
HERTKH++IDCH VR+Q + GFI+ I++ Q A
Sbjct: 1353 HERTKHVEIDCHTVRDQVQAGFIHLAPITSSGQLA 1387
>gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1353
Score = 865 bits (2235), Expect = 0.0
Identities = 474/1172 (40%), Positives = 691/1172 (58%), Gaps = 37/1172 (3%)
Frame = +3
Query: 144 RKSKEERAKLICEHCGFHGHEIKECFKLHGYPDWYKELKEQRGNQSINMVEGGEMTQTKY 323
+++K+ K +C HCG GH + C+K HG P +K + QS++
Sbjct: 191 KRNKDYNTK-VCSHCGRIGHLVDSCYKKHGPPLQHKHGRIVNQYQSVS------------ 237
Query: 324 KGEEETRKIELPDFASMIQKEIAKYLSNQGSTQSGDIH-SLSHFADYSGQSYNTHFALSL 500
+E+T D S+ + + + N G+ + + H +L SG LS
Sbjct: 238 --DEDT-----DDDQSVHSQRVVSH--NSGNMFTPEQHQALLALLQQSGM------ILSF 282
Query: 501 FHTLGRDTWIVDTGASRHICASPELIDKITIMSTPVNVHLPDGTSMSVSHTGTVQLSDEI 680
++ D WI+DTGA+ H+C + + P+ + LP+G+ +S +GTV LS
Sbjct: 283 PYSHNSDCWIIDTGATDHVCKNINFFQSYRRIK-PILIQLPNGSQVSTCVSGTVLLSKTC 341
Query: 681 TLTNVLVVPSFKYNLLSVSQLLHGNGLECVFSQKQCWLQDPKNGRVKAVGRICGGLYLFG 860
LT+VL +P+F +NL+SVS+L FS C +Q + R+ + GLY
Sbjct: 342 YLTDVLFIPNFHFNLISVSKLAKTLSCTLTFSDSDCQIQANHSMRMIGAAELRAGLYAMV 401
Query: 861 MTEFSGSL--TTGN--TANLQLWHRRLGHTSMSCMEHIV--FLKSVCNKDIKYSCSTCHV 1022
+ S + T + T LWH RLGH S + + + + CNK I C CH+
Sbjct: 402 SSPESNVVHHCTSHFFTYQSDLWHLRLGHLSHDKLSALKGSYPEIQCNK-ISLPCEICHL 460
Query: 1023 AKQCRLTFPLSTIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYTRATWIYLMKKK 1202
AK RL FP S +S++VF+LIHVDIWGP +S+ Y LTIVDD +R TWI+ MK K
Sbjct: 461 AKHKRLPFPDSLTKSENVFDLIHVDIWGPLSVASIFGHKYFLTIVDDKSRFTWIFFMKNK 520
Query: 1203 SEAPMHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSCPYTPQQN 1382
E + L+NF +F QFQ +K +RTDNG+EF+ ++ ++GI+HQ SC TPQQN
Sbjct: 521 FETKLLLQNFVSFVQTQFQQNIKTIRTDNGSEFL---LKDWYAKLGIVHQTSCVNTPQQN 577
Query: 1383 GVVERKHRHILEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPFELLHKEP 1562
GVVERKH+HIL +ARALMFQS V + FW Y++ VH++N LP+ L SP+ +L+ E
Sbjct: 578 GVVERKHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFLQQNSPYYVLYSEK 637
Query: 1563 PKYERFKVFGCLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNMNTGEIFLSRDV 1742
P + KVFGCL +AST ++ K + R+ +C+FLG+ G KG+ ++++ T E F+SRDV
Sbjct: 638 PDFSHLKVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSSGTKGFIMYDLKTRETFISRDV 697
Query: 1743 VFYETQFPFQAHPS---------PLKDVPL----PVPAH--DIGEETE------------ 1841
FYE FP Q S P+ +PL P+P+H D +ETE
Sbjct: 698 QFYENIFPLQKDFSIQSTDGPVVPIAQMPLTSCDPIPSHTHDNLDETEHEHNSSTLPMTN 757
Query: 1842 --GTDTQDVEPTPPPPAQQLGRGHRIKHKPAWLNDYVTNSIHTAHLIETPAESVKPTPYR 2015
+D ++E P + R+K++P +L DY H +S Y
Sbjct: 758 SSNSDQPNIEINIPEIRRT---SQRVKNRPGYLQDY-----HCTLAASKVDQSSSTARYP 809
Query: 2016 L-DCFPYTYSSILSPAYSAFLTQITESQSEPTTYGEAVQDKAWIEAMNRELLALEQNETW 2192
+ D PYT S + ++ + ++ I E P +Y +A+ W EA+ EL AL++ +TW
Sbjct: 810 ISDYLPYTSYSAVQQSFVSTISSIIE----PRSYQDAINHDCWKEAIRAELDALDKQKTW 865
Query: 2193 ILTSLPPGKKAIGSKWVYKIKRNSDGSVDRYKARLVAKGYLQVEGIDFMESFSPVAKLVS 2372
ILT LPP K+A+G +WV+K+K ++DGSV+RYKARLVAKG+ Q+ G+D++++FSPV ++ +
Sbjct: 866 ILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAKGFTQIPGLDYIDTFSPVVRMTT 925
Query: 2373 VRMIIALATQKNWELHHIDINNAFLHGYLEEEVYMIPPEGYFKAKKGEVCLLKRSLYGLK 2552
+R+ +A+A NW +H +DIN AFLHG L EEVYM PP G + +VC L++SLYGLK
Sbjct: 926 IRVFLAIAAASNWSVHQLDINTAFLHGDLVEEVYMKPPPGLILSSPNKVCKLQKSLYGLK 985
Query: 2553 QASRQWNLEFSQKLLSFGFIQSTHDNCLFVKRTGDDFLALLIYVDDVLITGNSVTLIQSL 2732
Q SRQWN++ ++ L FGF+QS D LF KRT F+A+L+YVDD++I+G+ T I +
Sbjct: 986 QVSRQWNIKLTETLKLFGFVQSKSDYSLFTKRTNIGFIAILVYVDDLIISGSDETEIMKV 1045
Query: 2733 KDYLHQLFTIKDLGNAKYFLGLEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSSTPFPQ 2912
K L + F+IKDLG YFLGLE RS +G +CQRKY ++LL+D G+L KP STP
Sbjct: 1046 KRLLDKQFSIKDLGQLSYFLGLEFSRSDQGISVCQRKYALELLQDTGLLASKPCSTPMDH 1105
Query: 2913 GYNISAQHSANFTDVEKYRRLVGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWDAAIHL 3092
+ ++D YRRLVGRL+YL +RPD++F V +LSQF+H P AH+ AA +
Sbjct: 1106 TTRLHHDPLDLYSDPSSYRRLVGRLIYLTHTRPDLAFAVGKLSQFMHQPNNAHFQAARKV 1165
Query: 3093 LKYLKGTPSLGLYYSAESSNKFEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXXXXXXX 3272
L+Y+K TP+ GL++ + S K + D+DW TC +R+S++G+C F G+AL
Sbjct: 1166 LRYVKATPTKGLFFPSSSDLKLTGYTDSDWATCPDSRRSISGFCFFLGNALVSWKSKKQN 1225
Query: 3273 XXXXXXAEAEYRSMAATVCEMQWLYNLSQDLHIAAPLPITLHCDNKAALHITANPVFHER 3452
+EAEYR++A VCE QWL+ L D + +PI+L CDN++AL+I ANPVFHER
Sbjct: 1226 VVSRSSSEAEYRALALGVCEAQWLHKLLTDFQLQDLIPISLFCDNQSALYIAANPVFHER 1285
Query: 3453 TKHLDIDCHIVRNQYKLGFINPVHISTVRQTA 3548
TKH++IDCH VR+Q + GFI+ I++ Q A
Sbjct: 1286 TKHVEIDCHTVRDQVQAGFIHLAPITSSGQLA 1317
>gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1136
Score = 855 bits (2210), Expect = 0.0
Identities = 468/1139 (41%), Positives = 657/1139 (57%), Gaps = 15/1139 (1%)
Frame = +3
Query: 177 CEHCGFHGHEIKECFKLHGYPDWYKELKEQRGNQSINMVEGGEMTQTKYKGEEETRKIEL 356
C HCG GH I+ C++ HG+P K L ++ S+N G+ T E T+ +E
Sbjct: 1 CTHCGKTGHTIEVCYQKHGFPPGSKPLSDKTA--SVNHTVTGDCKVT-----ESTQSLES 53
Query: 357 PDFASMIQKEIAKYLSNQGSTQSGDIHSLSHFADYSGQSYN-THFALSLFHTLGRDTWIV 533
D Q+ A Q ST +G S + T F + +WI+
Sbjct: 54 QDVRFTPQQYQALLALIQQST--------------TGTSASCTSFPIVCSAISTPSSWIL 99
Query: 534 DTGASRHICASPELIDKITIMSTPVNVHLPDGTSMSVSHTGTVQLSDEITLTNVLVVPSF 713
D+GA+ H+ ++ + ++ P++V LP G +S +H+G V+ ++ L +VL +P F
Sbjct: 100 DSGATDHVSSTLSHFSSFSPIN-PIDVKLPTGQHVSATHSGIVKFTNSFYLVDVLYIPDF 158
Query: 714 KYNLLSVSQLLHGNGLECVFSQKQCWLQDPKNGRVKAVGRICGGLYLFGMTEFSGSLTTG 893
YNL+S+S+L+ + +F + C +Q+ + + GGLY F T
Sbjct: 159 TYNLISISKLVSSLSCQFIFDRHSCIIQETNTMKKIGTVDVNGGLYSFTANNIHNPSTNS 218
Query: 894 NTAN-------LQLWHRRLGHTSMSCMEHIVFLKSVCNKDIKYSCSTCHVAKQCRLTFPL 1052
+ + LWH R+GH S ++ + + D +SC+TCH KQ +L+FPL
Sbjct: 219 IIVHPKCSIQPIDLWHFRMGHLSQERLQLMKQSFPFLSVDKSFSCNTCHHDKQKKLSFPL 278
Query: 1053 STIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYTRATWIYLMKKKSEAPMHLKNF 1232
S + F+L+H+DIWGP +S+ Y L IVDD+TR TW++LM+ KSE H+ NF
Sbjct: 279 SHSYALQPFDLLHMDIWGPCPVTSMHGHKYFLAIVDDHTRFTWLFLMQNKSETRQHIINF 338
Query: 1233 FAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSCPYTPQQNGVVERKHRHI 1412
QF VK +RTDNG EF GI+HQ +C TPQQNG+VERKH+H+
Sbjct: 339 INQVETQFDKNVKVIRTDNGLEF---SMTQYFSSKGIIHQTTCVETPQQNGIVERKHQHL 395
Query: 1413 LEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPFELLHKEPPKYERFKVFG 1592
L + R+L+FQ+ +P FW ++L ++N +P+ LH SPFE L+ P +VFG
Sbjct: 396 LNVTRSLLFQANLPSIFWCFALKHAAFLINCIPTPFLHNISPFEKLYGHPCDISILRVFG 455
Query: 1593 CLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNMNTGEIFLSRDVVFYETQFPFQ 1772
CLCY+S H+ K D RA C+FLGF P KGY L N++T + +S++V+F+E FP
Sbjct: 456 CLCYSSIITSHRTKLDPRAHPCIFLGFKPHTKGYLLVNLHTHGLLVSQNVIFHEDHFPSF 515
Query: 1773 AHP-SPLKDVPLPVPAHDIGEETEGTDTQDVEPTPPPPAQQ------LGRGHRIKHKPAW 1931
P SP P+P+P ++ + + VE + PPP Q L R R + P +
Sbjct: 516 TKPNSPSFSSPVPIP-YNYADYPSFPSSSIVESSEPPPPDQHSSPPPLRRSTRPRRPPTY 574
Query: 1932 LNDYVTNSIHTAHLIETPAESVKPTPYRLDCFPYTYSSILSPAYSAFLTQITESQSEPTT 2111
L D+ H A P S T R + LSP++ ++ I+ S ++P
Sbjct: 575 LQDF-----HGAFTSTGPHSS---TGIRHPLHSFISYDRLSPSFHHYVFSIS-SVTKPKN 625
Query: 2112 YGEAVQDKAWIEAMNRELLALEQNETWILTSLPPGKKAIGSKWVYKIKRNSDGSVDRYKA 2291
+ EA + +W++AM+ E+ ALE N TW+LT+LPP K AIG +WVYK+K +DGS+DRYKA
Sbjct: 626 FVEASKSDSWLKAMHEEISALEANNTWVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKA 685
Query: 2292 RLVAKGYLQVEGIDFMESFSPVAKLVSVRMIIALATQKNWELHHIDINNAFLHGYLEEEV 2471
RLVAKGY Q+EG+DF ++FSPVAKL +VR++I+LA N L +D+NN+FLHG L EEV
Sbjct: 686 RLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLISLAAIHNCHLKQLDVNNSFLHGDLNEEV 745
Query: 2472 YMIPPEGYFKAKKGEVCLLKRSLYGLKQASRQWNLEFSQKLLSFGFIQSTHDNCLFVKRT 2651
YM P G + G+VC L+RSLYGLKQASRQW S L+ G++ S D+ LF+K +
Sbjct: 746 YMQLPPGITPSFPGQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLFLKCS 805
Query: 2652 GDDFLALLIYVDDVLITGNSVTLIQSLKDYLHQLFTIKDLGNAKYFLGLEILRSSKGTHL 2831
A+LIYVDD+++ GN +T I L LH F IKDLGN KYFLGLE+ R+ G HL
Sbjct: 806 PAITTAILIYVDDIVLAGNDLTEIHHLTSLLHNTFQIKDLGNLKYFLGLEVARNHTGIHL 865
Query: 2832 CQRKYVMDLLKDAGMLGCKPSSTPFPQGYNISAQHSANFTDVEKYRRLVGRLLYLNLSRP 3011
CQRKY +DLL D GML KP STP ++SA FTD YRRLVGRL+YL +RP
Sbjct: 866 CQRKYTLDLLSDTGMLASKPVSTPMDYSTHLSASSGTPFTDTAAYRRLVGRLIYLPNTRP 925
Query: 3012 DISFGVQQLSQFVHAPLQAHWDAAIHLLKYLKGTPSLGLYYSAESSNKFEAFCDADWGTC 3191
I++ VQQLSQFV P AH A +L YLKGTP G++ S SS + AF D DW C
Sbjct: 926 AIAYAVQQLSQFVSNPPTAHRQALFRILCYLKGTPGSGIFLSVNSSVQLRAFSDYDWAGC 985
Query: 3192 LLTRKSLTGYCIFFGDALXXXXXXXXXXXXXXXAEAEYRSMAATVCEMQWLYNLSQDLHI 3371
TR+S+TG+ ++ GD+L +EAEYR++A T CE+QWL L +D HI
Sbjct: 986 PDTRRSITGFAVYLGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHI 1045
Query: 3372 AAPLPITLHCDNKAALHITANPVFHERTKHLDIDCHIVRNQYKLGFINPVHISTVRQTA 3548
P L+CDN+ AL I +NP+FHERTKH++IDCHIVR++ G + + +S+ Q A
Sbjct: 1046 DLIRPSILYCDNQFALQIASNPIFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSLQLA 1104
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 851 bits (2198), Expect = 0.0
Identities = 493/1177 (41%), Positives = 685/1177 (58%), Gaps = 45/1177 (3%)
Frame = +3
Query: 153 KEERAKLICEHCGFHGHEIKECFKLHGYPDWYK------ELKEQRGNQSINM-VEGGEMT 311
++++ L C +C H I++C+ LHG+P +K + QR + + N+ VE +
Sbjct: 290 QKQKTPLHCSYCDRDYHSIEKCYYLHGFPIGHKLHGKNVKPPNQRHSNANNVKVETNKAV 349
Query: 312 QTKYK------GEEETRKIELPDFASMIQKEIAKYLSNQGSTQSGDIHSLSHFADYSGQS 473
+T+ K G T + E +MI+K +N G++Q HFA+ +G +
Sbjct: 350 ETEAKLLPTNDGPRLTTE-EYNQLMAMIRK------NNGGNSQ--------HFANATGIN 394
Query: 474 YNTHFAL-SLFHTLGRDTWIVDTGASRHICASPELIDKITIMSTPVNVHLPDGTSMSVSH 650
++ + + H+ WI+D+GA+ H+ +S EL+D + T + LP+G +
Sbjct: 395 MSSSKIIPNCPHS--NMCWIIDSGATDHVTSSAELLDPKNLPKT-TTISLPNGGQAHIES 451
Query: 651 TGTVQLSDEITLTNVLVVPSFKYNLLSVSQLLHGNGLECV--FSQKQCWLQDPKNGRVKA 824
G++ ++ I L +VL VP F+ NLLSVS+L L+C+ F C +QD +
Sbjct: 452 IGSLHVTPHIKLDDVLKVPQFQVNLLSVSKLTRA--LQCIVMFFFDFCVVQDATTRKTIG 509
Query: 825 VGRICGGLYLFGMTEFSGSLTTGNTANLQLWHRRLGHTSMSCMEHIVFLKSVCNKDIKYS 1004
+G+ GLY + + +L + LWH+RLGH S ++ + + D K+
Sbjct: 510 LGKQHNGLYYLAQDQ-NPALAYAIHKHSDLWHQRLGHPSSGPLQVLAKVNPKIYFDSKHV 568
Query: 1005 CSTCHVAKQCRLTFPLSTIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYTRATWI 1184
C C +AKQ RL+FP S I S F+LIH DIWGP+ +S + Y LTIVDD+TR TWI
Sbjct: 569 CDICPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGAXYFLTIVDDHTRYTWI 628
Query: 1185 YLMKKKSEAPMHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSCP 1364
+LM KSE L++F ++ QF +K +RTDNGTE + L GI + SC
Sbjct: 629 HLMSFKSETQGILQSFISWVETQFNRCIKTLRTDNGTEISS--MKQYLDTKGINYHHSCA 686
Query: 1365 YTPQQNGVVERKHRHILEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPFE 1544
YTPQQNGVVERKHRH+L + RAL FQ+ +P KFW S+ T +++N LP+ LL KSP++
Sbjct: 687 YTPQQNGVVERKHRHLLNVGRALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSPYQ 746
Query: 1545 LLHKEPPKYERFKVFGCLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNMNTGEI 1724
LL + P Y + FGCLCYA+ P KFD RA C+F+G+ G KGYR++++ T +
Sbjct: 747 LLXNKLPSYHHLRTFGCLCYATNLLPTH-KFDQRARRCIFVGYPLGQKGYRVYDLXTNKF 805
Query: 1725 FLSRDVVFYETQFPFQAHPSPLKD----VPLPVPAHD-IGEETEGTDTQDVEP------- 1868
F S DVVF+E FPF +P + +PLP +++ I ET D P
Sbjct: 806 FSSXDVVFHEHIFPFHTNPQEEQHDVVVLPLPQTSYEPITTETTKPQADDQPPPLLSSLE 865
Query: 1869 --------------TPPPPAQQLGRGHRIKHKPAWLNDYVTNSIHTAHLIETPAESVKPT 2006
+PPPP + R RIK L ++ + HTA + + + S+ T
Sbjct: 866 STSNERTLXLDTIVSPPPPTTR--RSDRIKQPNVHLRNF--HLYHTAKVASSQSSSLSGT 921
Query: 2007 PYRLDCFPYTYSSILSPAYSAFLTQITESQSEPTTYGEAVQDKAWIEAMNRELLALEQNE 2186
+ L Y + LSP Y F+ IT + EPTTY +AV D W EAM EL ALEQN
Sbjct: 922 RHPLT--RYISYAQLSPKYRNFVCAIT-TLVEPTTYEQAVLDPKWQEAMAAELHALEQNH 978
Query: 2187 TWILTSLPPGKKAIGSKWVYKIKRNSDGSVDRYKARLVAKGYLQVEGIDFMESFSPVAKL 2366
TW LT LP G + IG KWVYKIK NSDG+V+RYKARLVAKG+ Q EGID+ E+FSPVAKL
Sbjct: 979 TWTLTPLPYGHRPIGCKWVYKIKYNSDGTVERYKARLVAKGFTQREGIDYKETFSPVAKL 1038
Query: 2367 VSVRMIIALATQKNWELHHIDINNAFLHGYLEEEVYMIPPEGYFKAKKGE---VCLLKRS 2537
+VR ++A+A ++W LH +D+ NAFLHG L EEVYM P G+ ++GE VC L +S
Sbjct: 1039 TTVRCLLAIAAVRHWSLHQMDVQNAFLHGDLLEEVYMQLPLGF--RQQGETPMVCRLNKS 1096
Query: 2538 LYGLKQASRQWNLEFSQKLLSFGFIQSTHDNCLFVKRTGDDFLALLIYVDDVLITGNSVT 2717
LYGLKQASR W +FS + GF QS D LF K +G+ F A+LIYVDD++ITGN
Sbjct: 1097 LYGLKQASRSWFRKFSATIQQDGFHQSRADYSLFTKISGNSFTAVLIYVDDMIITGNDEN 1156
Query: 2718 LIQSLKDYLHQLFTIKDLGNAKYFLGLEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSS 2897
+I +LK+ LH F IKDLG +YFLG+E+ RS+ G + QRKY +D+L +AG+LG KP S
Sbjct: 1157 VIAALKESLHTKFRIKDLGQLRYFLGIEVARSTDGISISQRKYTLDILDEAGLLGAKPLS 1216
Query: 2898 TPFPQGYNISAQHSANFTDVEKYRRLVGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWD 3077
TP + + + YRRLVG+L+YL ++RP+IS+ V LSQF+ P + H
Sbjct: 1217 TPMEENNKLLPTVGDLLKNPSTYRRLVGQLIYLTITRPEISYSVHILSQFMQEPRKPHLH 1276
Query: 3078 AAIHLLKYLKGTPSLGLYYSAESSNKFEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXX 3257
A HLL+YLKG P GLY+ A+ + FCDADW C +TR+S+TGYCIF A
Sbjct: 1277 AVHHLLRYLKGAPGQGLYFPAKGNLLLRGFCDADWARCSITRRSVTGYCIFLXGAXISWK 1336
Query: 3258 XXXXXXXXXXXAEAEYRSMAATVCEMQWLYNLSQDLHIAAPLPITLHCDNKAALHITANP 3437
E+EYR+MA+ CE+ WL L DL + P L CD+KAALHI ANP
Sbjct: 1337 TKKQTTVSRSSXESEYRAMASITCELTWLRYLLDDLKVEHSQPAKLFCDSKAALHIAANP 1396
Query: 3438 VFHERTKHLDIDCHIVRNQYKLGFINPVHISTVRQTA 3548
V+HERTKH++IDCH+VR + + G I H+ + Q A
Sbjct: 1397 VYHERTKHIEIDCHVVRERIQSGAIVTAHVPSSCQLA 1433
>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1427
Score = 848 bits (2192), Expect = 0.0
Identities = 477/1169 (40%), Positives = 665/1169 (56%), Gaps = 44/1169 (3%)
Frame = +3
Query: 174 ICEHCGFHGHEIKECFKLHGYPDWYKELKEQRGNQSINMVEG-GEMTQ----TKYKGEEE 338
+C CG H I C+ HG+P +K K++ SIN + TQ ++ + +E
Sbjct: 233 VCTFCGKENHTIDSCYFKHGFPPNFK-FKDKGNTTSINTISSKAPSTQASEISRKQNKES 291
Query: 339 TRKIELPDFASMIQKEIAKYLSNQGSTQSGDIHSLSHFADYSGQSYNTHFALSLFHTLGR 518
T D+ +I L + + + +H + + S L HT
Sbjct: 292 TSNFTHEDYDHLIDMLKRAKLQSPEHSINQLVHQTTTESVSSSNLQQNQPGNPLEHT--- 348
Query: 519 DTWIVDTGASRHICASPELIDKITIMSTPVNVHLPDGTSMSVSHTGTVQLSDEITLTNVL 698
WI+DTGA+ H+C S K + PV+V LP+G + + +GT+ S++ L +VL
Sbjct: 349 -DWILDTGATDHVCNSLYFFTKYHPID-PVHVKLPNGNTSTAQFSGTIIFSEKFFLNDVL 406
Query: 699 VVPSFKYNLLSVSQLLHGNGLECVFSQKQCWLQDPKNGRVKAVGRICGGLYLFGMTEFSG 878
+P+F N++SV ++ E +F++ C +QD + + + + LY+
Sbjct: 407 YIPNFHLNIISVQKIAASLDYELMFNKNSCIIQDLTSKKTIGLAEVKNHLYILQRPSKDN 466
Query: 879 SLTT------------GNTANLQLWHRRLGHTSMSCMEHIVFLKSVCNKDIKYSCSTCHV 1022
S++ G T++ LWH RLGH S ++ + L + +C CH
Sbjct: 467 SISACKSNSVLNAQPKGTTSSFDLWHYRLGHPSHVVLQTVKRLFPYVTYNKNITCDYCHF 526
Query: 1023 AKQCRLTFPLSTIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYTRATWIYLMKKK 1202
KQ RL FP ST +S F+L+H+DIWGP S+ Y LTIVDDY+R TWIY MK K
Sbjct: 527 GKQARLPFPTSTTKSLSCFDLVHMDIWGPLAIPSIHGHKYFLTIVDDYSRHTWIYFMKSK 586
Query: 1203 SEAPMHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSCPYTPQQN 1382
E ++NF ++ QF +K +R+DNG EF L GI+HQ SC TPQQN
Sbjct: 587 GETRNLIQNFISYVQTQFTKHIKVLRSDNGVEFA---MDQLYATYGIVHQTSCVETPQQN 643
Query: 1383 GVVERKHRHILEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPFELLHKEP 1562
VVERKHRHIL I R L+F S VP+ FW Y++ +H++N LPS +L+ SP+++L+ +P
Sbjct: 644 SVVERKHRHILNITRTLLFHSNVPKSFWCYAVGHAIHLINRLPSPVLNNSSPYQMLYDKP 703
Query: 1563 PKYERFKVFGCLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNMNTGEIFLSRDV 1742
P KVFG LCYAST + K +A++ V+LG G KG+ + ++ T IF+SR+V
Sbjct: 704 PTLLDLKVFGSLCYASTLVQGRSKLAPKATKGVYLGVKQGTKGFLVLDLLTRSIFVSRNV 763
Query: 1743 VFYETQFPF------------QAHPSPLKDVPLPVPAH-----------DIGEETEGTDT 1853
VFYE FPF Q + + + L +H DI D
Sbjct: 764 VFYEHIFPFFEKGSTVITNSQQQNDACFDFLYLDSSSHPVTTIDNSSLLDIDSAHYENDL 823
Query: 1854 QDVE----PTPPPPAQQLGRGHRIKHKPAWLNDYVTNSIHTAHLIETPAESVKPTPYRLD 2021
D++ P+ QL + R K PA+L DY H LI P K Y L+
Sbjct: 824 NDIDESAHPSETSSPSQLRKSTRHKCSPAYLKDY-----HCNLLIGVPPPEDKHIRYPLN 878
Query: 2022 CFPYTYSSILSPAYSAFLTQITESQSEPTTYGEAVQDKAWIEAMNRELLALEQNETWILT 2201
+Y S LS +YS ++ IT + EP T+ +AV++K W+EAM EL ALE N+TW +
Sbjct: 879 TV-LSYDS-LSASYSRYVLSIT-THVEPHTFNQAVKNKVWVEAMQAELDALEHNKTWTIM 935
Query: 2202 SLPPGKKAIGSKWVYKIKRNSDGSVDRYKARLVAKGYLQVEGIDFMESFSPVAKLVSVRM 2381
LPPGK IGSKWVYKIK SDGS++RYKARLV KGY Q++G+D+ ++F+PVAKL +VRM
Sbjct: 936 PLPPGKTPIGSKWVYKIKYKSDGSIERYKARLVVKGYTQIQGLDYFDTFAPVAKLSTVRM 995
Query: 2382 IIALATQKNWELHHIDINNAFLHGYLEEEVYMIPPEGYFKAKKGEVCLLKRSLYGLKQAS 2561
++A+A+ ++WELH +DINNAFLHG L E+VYM P+G K VC L +SLYGLKQAS
Sbjct: 996 LLAIASCQHWELHQLDINNAFLHGDLLEDVYMEIPQGLNIDKPNHVCKLNKSLYGLKQAS 1055
Query: 2562 RQWNLEFSQKLLSFGFIQSTHDNCLFVKRTGDDFLALLIYVDDVLITGNSVTLIQSLKDY 2741
RQW + S LLS + QS HD+ LF K G F +LIYVDD++I G I +K
Sbjct: 1056 RQWFAKLSSFLLSLHYKQSQHDHSLFTKHHGTHFTVILIYVDDLIIAGTDSEEINHIKQS 1115
Query: 2742 LHQLFTIKDLGNAKYFLGLEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSSTPFPQGYN 2921
L F IKDLG +YFLGLEI RS G L QRKY +DLL + L KP TP +G
Sbjct: 1116 LDVKFKIKDLGPLRYFLGLEIARSHLGISLSQRKYTLDLLDETSFLAGKPVLTPIIKGTR 1175
Query: 2922 ISAQHSANFTDVEKYRRLVGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWDAAIHLLKY 3101
+S + + D YRRL+G+LLYL +RPDIS+ VQQLSQF+ P Q+H+ AAI +L+Y
Sbjct: 1176 LSHTTDSPYEDPAGYRRLIGKLLYLITTRPDISYSVQQLSQFLSCPQQSHYQAAIRVLRY 1235
Query: 3102 LKGTPSLGLYYSAESSNKFEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXXXXXXXXXX 3281
LKG P GL+Y A+S + +AF D+DW +C TR+SL+GY IF G++L
Sbjct: 1236 LKGNPGQGLFYPADSPLQLKAFSDSDWASCPDTRRSLSGYSIFLGNSLISWKCKKQSTIS 1295
Query: 3282 XXXAEAEYRSMAATVCEMQWLYNLSQDLHIAAPLPITLHCDNKAALHITANPVFHERTKH 3461
+EAEYR++AAT CE+QWL L QD + P L+CDN++A HI +N VFHERTKH
Sbjct: 1296 RSSSEAEYRALAATACEIQWLTYLLQDFSVPFTTPALLYCDNQSARHIASNAVFHERTKH 1355
Query: 3462 LDIDCHIVRNQYKLGFINPVHISTVRQTA 3548
++IDCH+VR + + G + + I++ Q A
Sbjct: 1356 IEIDCHLVREKLQAGLFHLLPIASSHQLA 1384
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 841 bits (2173), Expect = 0.0
Identities = 485/1192 (40%), Positives = 670/1192 (56%), Gaps = 59/1192 (4%)
Frame = +3
Query: 150 SKEERAKLICEHCGFHGHEIKECFKLHGYPDWYKELKEQRGNQSINMVEGGEMTQTKYKG 329
+K RA L C +CG GH C + + + N + + EG E
Sbjct: 281 TKNCRAHLKCTYCGGKGHTYDYCRRRKNTMGGGQG--RSKVNHAATLNEGKEDVTNFPLS 338
Query: 330 EEETR-------KIELPDFASMIQKEIAKYLSNQGSTQSGDIHSLSHFADYSGQSYNTHF 488
+ E + KI+ + ++ + L + + ++ ++ + SG+ F
Sbjct: 339 QSECQQMMGLLSKIKTAATSHSDGHQMLEMLHATKQASANLVGNVPNYEELSGRV----F 394
Query: 489 ALSLFHTLGRDTWIVDTGASRHICASPELIDKITIMSTPVNVHLPDGTSMSVSHTGTVQL 668
ALS + WI+D+GAS HI + + + V LPDGTS VSH GTV
Sbjct: 395 ALS--RDIKDTMWILDSGASDHIVCDSSFLTSFQPVHNRI-VKLPDGTSAHVSHIGTVSF 451
Query: 669 SDEITLTNVLVVPSFKYNLLSVSQLLHGNGLECVFSQKQCWLQDPKNGRVKAVGRICGGL 848
S + L NVL VP F NL+S+S+L + +F ++ C++QD ++G++ +G GL
Sbjct: 452 SAQFVLHNVLCVPLFYLNLISISKLAFDSFYVTIFLRQVCFIQDLQSGKMIGMGTESEGL 511
Query: 849 YLFGMTEFSGSLTTGNTANLQLWHRRLGHTSMSCMEHIVFLKSVCNKDIKYS-CSTCHVA 1025
Y + G+ NT LWH+RLGH S FL+ NK + S CS C +A
Sbjct: 512 YCLNLPR-KGTCNVVNTKTQDLWHQRLGHPSSKVSVLFPFLQ---NKTLDVSTCSICPLA 567
Query: 1026 KQCRLTFPLSTIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYTRATWIYLMKKKS 1205
K R FPLS S F+LIHVDIWG YH S++ Y LTIVDD++R+TW+YLM KS
Sbjct: 568 KHTRTPFPLSVSSSDSCFDLIHVDIWGGYHVPSLSGAQYFLTIVDDHSRSTWVYLMHHKS 627
Query: 1206 EAPMHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSCPYTPQQNG 1385
EA L +F NQF VK +R+DNG EF + + GILHQ SC TPQQNG
Sbjct: 628 EARSLLVHFVNLVANQFGSQVKIVRSDNGPEFKHTQFYS---SRGILHQTSCINTPQQNG 684
Query: 1386 VVERKHRHILEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPFELLHKEPP 1565
VVERKHRH+L +ARAL+FQS +P+ FW ++LT +++N P+ LL K+PFE L + P
Sbjct: 685 VVERKHRHLLNVARALLFQSHLPKPFWGDAILTAAYLINRTPTPLLQGKTPFEKLFHKSP 744
Query: 1566 KYERFKVFGCLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNMNTGEIFLSRDVV 1745
Y +VFGC C+ ST KFD R+ E VF+G+ G KGY+++++ + +SRDV
Sbjct: 745 NYSHLRVFGCRCFVSTHPLRPSKFDPRSIESVFIGYPHGQKGYKVYSLKDKKXLISRDVT 804
Query: 1746 FYETQFPFQ---AHPSPLKDVPLP------------VPAHDIGEETEGTDTQDVEPTPPP 1880
F+ET+FP+Q + SP D P + + G + + T V+ P P
Sbjct: 805 FFETEFPYQNXLSTTSPSLDTFFPSLPQTPDIDDDHISFNHSGSNLQPSATSSVDXHPQP 864
Query: 1881 PAQQLGRGHRIKH-----KPAWLNDYVTNSIHTAHLIETPAESVKP--TPYRLDCF---- 2027
L H H P LN + + + P S +P TP L F
Sbjct: 865 ---TLDNSHSSSHVDPPSSPPSLN--TSPPVISQPSPSQPRRSSRPTKTPTTLQDFHIEA 919
Query: 2028 --------PYTYSSI-----------------LSPAYSAFLTQITESQSEPTTYGEAVQD 2132
P + S + LSP + AF +IT ++ EP ++ +AV D
Sbjct: 920 ALPSRPVPPSSTSEVAHSGTIHSLSQVLSYDRLSPMHKAFTVKITLAK-EPRSFSQAVLD 978
Query: 2133 KAWIEAMNRELLALEQNETWILTSLPPGKKAIGSKWVYKIKRNSDGSVDRYKARLVAKGY 2312
W EAMN E+ AL+ N+TW L LP KK IG KWVYKIK N DG+++RYKARLVAKG+
Sbjct: 979 SRWREAMNTEIQALQANKTWSLVPLPSHKKPIGCKWVYKIKYNPDGTIERYKARLVAKGF 1038
Query: 2313 LQVEGIDFMESFSPVAKLVSVRMIIALATQKNWELHHIDINNAFLHGYLEEEVYMIPPEG 2492
QVEGID+ E+F+PVAKL +VR++++LA+ + W LH +D+NNAFL+G L E+VYM P G
Sbjct: 1039 SQVEGIDYRETFAPVAKLTTVRVLLSLASIQGWHLHQLDVNNAFLNGDLYEDVYMQLPPG 1098
Query: 2493 YFKAKKGEVCLLKRSLYGLKQASRQWNLEFSQKLLSFGFIQSTHDNCLFVKRTGDDFLAL 2672
+ + + VC L +SLYGLKQASRQW L+ S L + GF QS D LF + T F L
Sbjct: 1099 FGRKGEHRVCKLHKSLYGLKQASRQWFLKLSSALKAAGFKQSWSDYSLFXRNTQGRFTTL 1158
Query: 2673 LIYVDDVLITGNSVTLIQSLKDYLHQLFTIKDLGNAKYFLGLEILRSSKGTHLCQRKYVM 2852
L+YVDDV++ GNS+ I K +L F +KD+G +YFLG+E+ RS +G LCQRKY +
Sbjct: 1159 LVYVDDVILAGNSLEDIIETKQFLASHFKLKDMGQLRYFLGIEVARSKQGIVLCQRKYAL 1218
Query: 2853 DLLKDAGMLGCKPSSTPFPQGYNISAQHSANFTDVEKYRRLVGRLLYLNLSRPDISFGVQ 3032
+LL+DAG LG KPS P Q ++ A D +YRRLVGRL+YL ++RPD+ + V
Sbjct: 1219 ELLEDAGFLGAKPSRFPVEQSLTLTRGDGAELKDASQYRRLVGRLIYLTITRPDLVYAVH 1278
Query: 3033 QLSQFVHAPLQAHWDAAIHLLKYLKGTPSLGLYYSAESSNKFEAFCDADWGTCLLTRKSL 3212
LSQF+ P Q H DAA +L+Y+K TP G++ + + A+CDADW C TR+S
Sbjct: 1279 ILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYCDADWARCKDTRRST 1338
Query: 3213 TGYCIFFGDALXXXXXXXXXXXXXXXAEAEYRSMAATVCEMQWLYNLSQDLHIAAPLPIT 3392
TGYCIFFG+A AEAEYRSMA T CE+ WL +L DL++ +
Sbjct: 1339 TGYCIFFGNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLRSLLADLNVNHAHAVK 1398
Query: 3393 LHCDNKAALHITANPVFHERTKHLDIDCHIVRNQYKLGFINPVHISTVRQTA 3548
L CDN+AA+HI +NPVFHERTKH+++DCH+VR + + G + +HI T Q A
Sbjct: 1399 LFCDNQAAIHIASNPVFHERTKHIEMDCHVVREKVQRGLVKTMHIRTQEQPA 1450
>gb|KYP37906.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1097
Score = 827 bits (2135), Expect = 0.0
Identities = 460/1129 (40%), Positives = 652/1129 (57%), Gaps = 33/1129 (2%)
Frame = +3
Query: 177 CEHCGFHGHEIKECFKLHGYPDWYK--------ELKEQRGNQSINMVEGGEMTQTKYKGE 332
C +C GH I+ C+K HGYP +K + GN +N G+++ KGE
Sbjct: 1 CTYCNKLGHTIETCYKKHGYPPHFKGGSAHNCYNEECDEGNPVLNE-SAGDIS----KGE 55
Query: 333 EETRKIELPDFASMIQKEIAKYLSNQGSTQSGDIHSLSHFADY---SGQSYNTHFALSLF 503
+ + F + K + L+ Q S H+ +H Y S + ++
Sbjct: 56 KGENSL---GFTAEQHKALLGMLTQQQSH-----HTANHITTYELPSTSDPQSGIVYTVS 107
Query: 504 HTLGRDTWIVDTGASRHICASPELIDKITIMSTPVNVHLPDGTSMSVSHTGTVQLSDEIT 683
+ + + WI+D+GA+ HIC S +L + + PV +HLPDG ++ + G++ S++
Sbjct: 108 NNMNNNIWILDSGATDHICRSIKLFQCLRRIK-PVKIHLPDGKCVTTNLCGSIFFSEDFF 166
Query: 684 LTNVLVVPSFKYNLLSVSQLLHGNGLECVFSQKQCWLQDPKNGRVKAVGRICGGLYLFGM 863
L +VL +P F +NL+SVS+L+ G FS C +QD ++ ++ + GLY+
Sbjct: 167 LADVLYIPEFNFNLVSVSRLIRQLGCRLTFSGDLCDIQDSQSMKMIGAAKHNMGLYVLDW 226
Query: 864 TE----FSGSLTTGNTANLQLWHRRLGHTSMSCME----HIVFLKSVCNKDIKYSCSTCH 1019
+ S+ ++ + LWH RLGH + ++ + F+ NKD C+ C+
Sbjct: 227 KPKVCLYLHSINNFHSYDNDLWHIRLGHLAHEKLQAMKSNFPFIDCKKNKD---PCNVCY 283
Query: 1020 VAKQCRLTFPLSTIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYTRATWIYLMKK 1199
+AKQ +L F S ++ +F+L+HVDIWGP +S+ + LTIVDD +R TW+Y MK
Sbjct: 284 LAKQRQLPFSHSVTKADEIFDLLHVDIWGPTTPASIFGHRFFLTIVDDKSRHTWVYFMKH 343
Query: 1200 KSEAPMHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSCPYTPQQ 1379
KSE HL +F NQF VK +R+DNG EF+ +N E GILHQ SC TPQQ
Sbjct: 344 KSEVADHLSSFITLIENQFGKKVKCVRSDNGPEFL---LKNFYHEKGILHQTSCVETPQQ 400
Query: 1380 NGVVERKHRHILEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPFELLHKE 1559
NG+VERKH+HI+ +ARAL+ QS +P+ FW Y++ V ++N PS+ L K P+E+++
Sbjct: 401 NGIVERKHQHIMTVARALVMQSNLPKSFWFYAVSHAVFLINRQPSSFLENKIPYEIIYNA 460
Query: 1560 PPKYERFKVFGCLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNMNTGEIFLSRD 1739
P KVFGCL YA+T ++ KFD R CVFLGF P VKG L+++N+ E FLSR
Sbjct: 461 LPDLAGIKVFGCLAYATTLHHNRKKFDPRGRRCVFLGFKPQVKGSILYDLNSRETFLSRH 520
Query: 1740 VVFYETQFPF---------QAHPSPLKDVPLPVPAHDIGEETEGTDTQD-VEPTPPPPAQ 1889
V ++E FPF Q P PLP+ T T T V PPPP
Sbjct: 521 VEYFEHIFPFLPTSPLDLTQTISLPRHQPPLPIDTDPTPLSTNTTPTSSPVSVVPPPPFV 580
Query: 1890 QLGRGHRIKHKPAWLNDY--VTNSIHTAHLIETPAESVKPTPYRLDCFPYTYSSILSPAY 2063
Q + R + P++L+DY + H + I P S+ +YS+ LSP+
Sbjct: 581 Q--KSTRPRKLPSYLHDYHHTLLTTHNSPTISQPLYSIHNH--------ISYSN-LSPSQ 629
Query: 2064 SAFLTQITESQSEPTTYGEAVQDKAWIEAMNRELLALEQNETWILTSLPPGKKAIGSKWV 2243
AF I+ S EP +Y EA+QD++W A+ EL ALE+N TWILT LPP K+ +G KWV
Sbjct: 630 KAFSLSIS-SIKEPNSYVEAIQDESWKTAIQTELTALEKNNTWILTPLPPNKQVVGCKWV 688
Query: 2244 YKIKRNSDGSVDRYKARLVAKGYLQVEGIDFMESFSPVAKLVSVRMIIALATQKNWELHH 2423
+K+K NSDG+++R+KARLVAKGY Q EG+D++++FSPV K+ +VR ++A+AT KNW +H
Sbjct: 689 FKLKFNSDGTIERHKARLVAKGYTQTEGLDYLDTFSPVVKMTTVRTLLAVATAKNWHIHQ 748
Query: 2424 IDINNAFLHGYLEEEVYMIPPEGYFKA--KKGEVCLLKRSLYGLKQASRQWNLEFSQKLL 2597
+D+N FLHG L EEVYM PP G + + VC L +SLYGLKQASRQWN + + L+
Sbjct: 749 LDVNTTFLHGDLHEEVYMTPPPGLTVSPHQSNCVCKLVKSLYGLKQASRQWNAKLTSVLI 808
Query: 2598 SFGFIQSTHDNCLFVKRTGDDFLALLIYVDDVLITGNSVTLIQSLKDYLHQLFTIKDLGN 2777
GF QS D LF K+ G F A+L+YVDD+++ GN T I +K L Q FTIKDLG
Sbjct: 809 DSGFKQSMADYSLFTKQFGAKFTAILVYVDDLVLAGNDPTEINYIKSLLDQKFTIKDLGQ 868
Query: 2778 AKYFLGLEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSSTPFPQGYNISAQHSANFTDV 2957
KYFLG+E+ RSS G L QRKY +DL++D G+L KP +P + TD
Sbjct: 869 LKYFLGMEVARSSTGIALYQRKYALDLIEDTGLLASKPCKSPMDHSVKLHKTVGTPLTDP 928
Query: 2958 EKYRRLVGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWDAAIHLLKYLKGTPSLGLYYS 3137
+YRRL+GRL+YL +R DISF V LSQF+ P H+ AA+ +LKY+K P GL++
Sbjct: 929 TQYRRLLGRLIYLTNTRADISFSVNHLSQFMDQPTDVHYQAALRILKYVKNAPGKGLFFP 988
Query: 3138 AESSNKFEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXXXXXXXXXXXXXAEAEYRSMA 3317
+ S + + D+DW +C TR+S+TG+ F G AL AEAEYR++A
Sbjct: 989 SSSDLTLKGYSDSDWASCSDTRRSVTGFSFFLGPALISWKSKKQATVSKSSAEAEYRALA 1048
Query: 3318 ATVCEMQWLYNLSQDLHIAAPLPITLHCDNKAALHITANPVFHERTKHL 3464
+ CE QW+ L D + PI L CDN++ALHI +NPVFHERTKH+
Sbjct: 1049 QSTCEAQWISYLLHDFGLHNFHPIVLFCDNQSALHIASNPVFHERTKHI 1097
>gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1376
Score = 835 bits (2157), Expect = 0.0
Identities = 461/1162 (39%), Positives = 655/1162 (56%), Gaps = 38/1162 (3%)
Frame = +3
Query: 177 CEHCGFHGHEIKECFKLHGYPDWYKELKEQRGNQSINMVEGGEMTQTKYKGEEETRKIEL 356
C CG +GH C++ HG+PD + RG + + G T YK K
Sbjct: 225 CNFCGRNGHTESTCYRKHGFPDKNGKSSSNRGKACSHCGKNGHTVDTCYK------KHGF 278
Query: 357 PDFASMIQKEIAKYLSNQGSTQSGDIHSLSHFADYSGQSYNTHFALSLFHTLGRDTWIVD 536
P SN S + S H + H+ WI+D
Sbjct: 279 PP---------GHRFSNNKSASANS-------------SVQPHICTT--HSFDTTPWIID 314
Query: 537 TGASRHICASPELIDKITIMSTPVNVHLPDGTSMSVSHTGTVQLSDEITLTNVLVVPSFK 716
+GA+ H+ S + ++ PV V+LP G ++ +H+GTV S LT+VL + SF
Sbjct: 315 SGATDHVTCSLQFFTSYKLIE-PVIVNLPTGHKVTATHSGTVYFSSNFQLTDVLYISSFA 373
Query: 717 YNLLSVSQLLHGNGLECVFSQKQCWLQDPKNGRVKAVGRICGGLYLFGMTEFSGSLTTGN 896
+NL+SVS+L+ + F+ C++QD + + GGLY F
Sbjct: 374 FNLISVSKLVSTTSYQITFTNNVCFIQDIRTKMKIGSVDVRGGLYQLIPHHFKPPFIHST 433
Query: 897 TAN-------LQLWHRRLGHTSMSCMEHIVFLKSVCNKDIKYSCSTCHVAKQCRLTFPLS 1055
+ + LWH RLGH S + + ++ L + ++C+ CH AKQ +L+F S
Sbjct: 434 IIHPKCDVIPIDLWHFRLGHLSNTRLHNMQQLYPCLTINKDFTCNICHYAKQRKLSFSSS 493
Query: 1056 TIQSKHVFELIHVDIWGPYH-ESSVTNTSYMLTIVDDYTRATWIYLMKKKSEAPMHLKNF 1232
+ F L+H+DIWGPY SS+ + TIVDD T TWI+LM KSE MH+ NF
Sbjct: 494 HSTASRPFSLLHMDIWGPYSCISSIHGHKFFFTIVDDNTHFTWIFLMINKSETRMHISNF 553
Query: 1233 FAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSCPYTPQQNGVVERKHRHI 1412
NQF ++ ++TDNG EF+ QN GI+HQ +C TPQQNGVVERKH+H+
Sbjct: 554 INLIENQFNTRIQTIQTDNGAEFL---MQNFFNSKGIVHQTTCIETPQQNGVVERKHQHL 610
Query: 1413 LEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPFELLHKEPPKYERFKVFG 1592
L + AL+F S +P FW Y+LL +++N + + LL K+PF+ L+ + +VFG
Sbjct: 611 LNVTHALLFHSKLPYCFWSYALLHATYLINRITTPLLDNKTPFQKLYGQTCDITELRVFG 670
Query: 1593 CLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNMNTGEIFLSRDVVFYETQFPFQ 1772
CLCY ST+ ++ K D RA CVFLGF P KGY ++++T I +SR+V FYE FP
Sbjct: 671 CLCYVSTSTANRKKLDPRAHPCVFLGFSPTTKGYITYDLHTRAITISRNVSFYENHFPLL 730
Query: 1773 AHPSPLKDVPL--PV------PAHDI---------------GEETEGTDTQDVEP----- 1868
S ++P+ P+ P+HD+ T D+ + P
Sbjct: 731 QSTSSTSNIPVVSPISFGIHSPSHDLISILPDPHQHNVTSPNPATTSHDSISLAPYSTTA 790
Query: 1869 -TPPPPAQQLGRGHRIKHKPAWLNDYVTNSIHTAHLIETPAESVKPTP-YRLDCFPYTYS 2042
+ PP + L R R+++ P++L DY H + + + ++ P Y ++ Y
Sbjct: 791 DSLPPNSSPLRRSTRLRNPPSYLQDY-------HHSLTSTSTNLHPGMLYPIE--KYISY 841
Query: 2043 SILSPAYSAFLTQITESQSEPTTYGEAVQDKAWIEAMNRELLALEQNETWILTSLPPGKK 2222
S LS + AF++ I+ + SEP +Y EA + W++AM+ EL AL+ N+TW LT LPP K+
Sbjct: 842 SRLSNDFQAFVSSIS-AVSEPHSYAEAAKHDCWLKAMHAELEALKMNQTWTLTPLPPHKQ 900
Query: 2223 AIGSKWVYKIKRNSDGSVDRYKARLVAKGYLQVEGIDFMESFSPVAKLVSVRMIIALATQ 2402
A+G +W+YKIK N+DGS++RYKARLVAKGY QVEG+D++ +FSPVAKL +VR+++ALA
Sbjct: 901 AVGCRWIYKIKYNADGSIERYKARLVAKGYTQVEGLDYLATFSPVAKLTTVRLLLALAAV 960
Query: 2403 KNWELHHIDINNAFLHGYLEEEVYMIPPEGYFKAKKGEVCLLKRSLYGLKQASRQWNLEF 2582
+W L +D+NNAFLHG L EEVYM P G +VC L++SLYGLKQASRQW +
Sbjct: 961 FDWHLKQLDVNNAFLHGDLNEEVYMTLPLGMRPEYSNQVCKLQKSLYGLKQASRQWFAKL 1020
Query: 2583 SQKLLSFGFIQSTHDNCLFVKRTGDDFLALLIYVDDVLITGNSVTLIQSLKDYLHQLFTI 2762
S L+ G+ QS D+ LF+K + ALLIYVDD+++ GN+++ IQ + L F I
Sbjct: 1021 SSFLIHHGYHQSASDHSLFMKFSSSSTTALLIYVDDIVLAGNNLSEIQLITGLLDVAFKI 1080
Query: 2763 KDLGNAKYFLGLEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSSTPFPQGYNISAQHSA 2942
KDLGN KYFLGLE+ R+ G HL QRKYV+D+L D GM+ +P STP +SA
Sbjct: 1081 KDLGNLKYFLGLEVARNKSGIHLSQRKYVLDILSDCGMMASRPVSTPMDYTSRLSASSGT 1140
Query: 2943 NFTDVEKYRRLVGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWDAAIHLLKYLKGTPSL 3122
D YRRL+GRL+YL +RPDIS+ V LSQF+ AP AH A +L+YLK P
Sbjct: 1141 PLADPSSYRRLLGRLIYLTTTRPDISYVVHHLSQFMSAPSTAHSQAIFRILRYLKQAPGS 1200
Query: 3123 GLYYSAESSNKFEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXXXXXXXXXXXXXAEAE 3302
GL++ SS +AF D+DW CL TR+S+TG+ ++ GD+L +EAE
Sbjct: 1201 GLFFPTNSSLHLKAFSDSDWAGCLDTRRSITGFSVYLGDSLISWRSKKQPTVSRSSSEAE 1260
Query: 3303 YRSMAATVCEMQWLYNLSQDLHIAAPLPITLHCDNKAALHITANPVFHERTKHLDIDCHI 3482
YR++A T E+QWL L DLH+ P L+CDN++ALHI AN VFHERTKH+DIDCH+
Sbjct: 1261 YRALATTTSELQWLTYLLHDLHVPVHQPALLYCDNQSALHIAANQVFHERTKHIDIDCHL 1320
Query: 3483 VRNQYKLGFINPVHISTVRQTA 3548
VR + + G + + +++ Q A
Sbjct: 1321 VREKLQSGLLKLLPVASPHQLA 1342
>gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1346
Score = 834 bits (2154), Expect = 0.0
Identities = 476/1175 (40%), Positives = 656/1175 (55%), Gaps = 47/1175 (4%)
Frame = +3
Query: 165 AKLICEHCGFHGHEIKECFKLHGYPDWYKELKEQRGNQSINMVEGGEMTQTKYKGEEETR 344
+K C +C H ++ CF+ HG P +K G+ + V+GGE T KG +
Sbjct: 227 SKRYCTYCHKTNHFVENCFQKHGVPPHM--MKNHSGSAHHSAVDGGEHT----KGMK--- 277
Query: 345 KIELPDFASMIQKEIAKYLSNQGSTQSGDIHSLSHFADYSGQSYNTHFALSLFHTLGRDT 524
+SHF F S+ + + DT
Sbjct: 278 --------------------------------ISHF-----------FYSSICNNIALDT 294
Query: 525 WIVDTGASRHICASPELIDKITIMSTPVNVHLPDGTSMSVSHTGTVQLSDEITLTNVLVV 704
WI+D+GAS HICAS + ++ P+ + LP+G ++ + GTV S ++TNVL V
Sbjct: 295 WIIDSGASHHICASLHWFHSYSEIN-PMIIKLPNGNHVTTKYAGTVVFSSSFSITNVLYV 353
Query: 705 PSFKYNLLSVSQLLHGNGLECVFSQKQCWLQDPKNGRVKAVGRICGGLYLFGMTE----- 869
P+F NL+SVSQL H F+ C +Q+ K+ ++ +G GLY T
Sbjct: 354 PTFTVNLISVSQLCHHTPYTLNFTDTICSIQEQKSLKMIGLGESRDGLYYLTQTNKECAS 413
Query: 870 ----FSGSLTTGNTANLQ---LWHRRLGHTSMSCMEHIVFLKSVCNKDIKYSCSTCHVAK 1028
S ++ N ++ +WH RLGH S S + + D C CH AK
Sbjct: 414 SNYNISSIFSSANNVHIPENAIWHFRLGHLSSSRIALLHSQFPFIVNDSSSVCDICHFAK 473
Query: 1029 QCRLTFPLSTIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYTRATWIYLMKKKSE 1208
+L F S ++ F+LIH DIWGP SV N +Y LT VDD++R TWI LMK KSE
Sbjct: 474 HRKLPFVHSYHKAIKCFDLIHFDIWGPISIKSVHNHAYFLTAVDDHSRYTWITLMKNKSE 533
Query: 1209 APMHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSCPYTPQQNGV 1388
A +H++NF F Q+ VK +RTDNG EF+ + GILHQ SC +PQQNG
Sbjct: 534 ARLHVQNFIHFIKTQYNHSVKSIRTDNGPEFL---MPDFYASKGILHQTSCVDSPQQNGR 590
Query: 1389 VERKHRHILEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPFELLHKEPPK 1568
VERKH+ IL I RAL+ QS +P+ FW Y++ V+I+N +P+ L KSP+ LL+ P
Sbjct: 591 VERKHQQILNIGRALLVQSNLPKSFWCYAVSHAVYIMNRVPAPNLQNKSPYTLLYNTAPD 650
Query: 1569 YERFKVFGCLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNMNTGEIFLSRDVVF 1748
++ KVFG L +AST H+ K D RA +CVFLG+ GVKG L ++ IFLSRDV
Sbjct: 651 FDTLKVFGSLVFASTLQSHRTKLDLRARKCVFLGYKSGVKGVVLLDLLNNSIFLSRDVTH 710
Query: 1749 YETQFPFQAH------------PSPL-------KDVPL-------PVPAHDIGEETEGTD 1850
+E FP+Q+ P+P D+ L P P H D
Sbjct: 711 HEHIFPYQSSSPKTPWEYHSISPTPNDSDITLDSDISLDINAEQSPSPPHSSLSPNISND 770
Query: 1851 T--QDVEPTPPPPAQQL------GRGHRIKHKPAWLNDYVT-NSIHTAHLIETPAESVKP 2003
T D + PPP + R + P L+DYV N+ T+H T K
Sbjct: 771 TVISDTSTSTPPPKDHNDSPLLHSKPIRQRRAPLHLSDYVCHNTSPTSHESLTSGTKSK- 829
Query: 2004 TPYRLDCFPYTYSSILSPAYSAFLTQITESQSEPTTYGEAVQDKAWIEAMNRELLALEQN 2183
Y L F ++LSP++ AF IT +EP +Y EA + + W+ AM EL AL +N
Sbjct: 830 --YPLSSFHSL--TLLSPSHKAFSMSITHC-TEPQSYEEASKHEHWVTAMKEELNALAKN 884
Query: 2184 ETWILTSLPPGKKAIGSKWVYKIKRNSDGSVDRYKARLVAKGYLQVEGIDFMESFSPVAK 2363
TW + LPP K IG KWVYK+K ++G ++RYKARLVAKGY QVEGID+ E+FSPVAK
Sbjct: 885 CTWKIVELPPHTKPIGCKWVYKVKHKANGQIERYKARLVAKGYNQVEGIDYFETFSPVAK 944
Query: 2364 LVSVRMIIALATQKNWELHHIDINNAFLHGYLEEEVYMIPPEGYFKAKKGEVCLLKRSLY 2543
+ +VR ++A+A KNW LH +D+NNAFLHG L+E+VYM P+G AK VC L++SLY
Sbjct: 945 ITTVRTLLAVAAIKNWHLHQLDVNNAFLHGDLQEDVYMKIPDGVTCAKPNSVCKLQKSLY 1004
Query: 2544 GLKQASRQWNLEFSQKLLSFGFIQSTHDNCLFVKRTGDDFLALLIYVDDVLITGNSVTLI 2723
GLKQASR+W + + LL G+IQS D LF G+ F ALL+YVDD+++ G+S+
Sbjct: 1005 GLKQASRKWYEKLTNLLLKEGYIQSISDYSLFTLTKGNTFTALLVYVDDIILAGDSIDEF 1064
Query: 2724 QSLKDYLHQLFTIKDLGNAKYFLGLEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSSTP 2903
+K+ L F IK+LG KYFLGLE+ S G + QRKY +DLLKD+G+LGCKP+STP
Sbjct: 1065 DRIKNVLDLAFKIKNLGKLKYFLGLEVAHSRLGITISQRKYCLDLLKDSGLLGCKPASTP 1124
Query: 2904 FPQGYNISAQHSANFTDVEKYRRLVGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWDAA 3083
+ + + D+ YRR+VG+LLYLN +RPDI+F QQLSQF+ AP H++AA
Sbjct: 1125 LDTSIKLHSAAGTPYADISGYRRIVGKLLYLNTTRPDIAFATQQLSQFMQAPTNVHFNAA 1184
Query: 3084 IHLLKYLKGTPSLGLYYSAESSNKFEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXXXX 3263
+L+YLK P G+++S S + + DADW C+ +RKS++GYC F G +L
Sbjct: 1185 CRVLRYLKNNPGQGIFFSRTSEMQLIGYSDADWAGCMDSRKSISGYCFFIGKSLVSWRAK 1244
Query: 3264 XXXXXXXXXAEAEYRSMAATVCEMQWLYNLSQDLHIAAPLPITLHCDNKAALHITANPVF 3443
+EAEYR++++ CE+QWL L DL + TL+CDN++A+HI +NPVF
Sbjct: 1245 KQATVSRSSSEAEYRALSSAACELQWLLYLFADLRVQLTRTPTLYCDNQSAVHIASNPVF 1304
Query: 3444 HERTKHLDIDCHIVRNQYKLGFINPVHISTVRQTA 3548
HERTKHL+IDCH+VR + G + + +ST Q A
Sbjct: 1305 HERTKHLEIDCHLVREKLLKGTLKLLPVSTSDQVA 1339
>gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1115
Score = 823 bits (2126), Expect = 0.0
Identities = 450/1079 (41%), Positives = 631/1079 (58%), Gaps = 30/1079 (2%)
Frame = +3
Query: 402 SNQGSTQSGDIHSLSHFADYSGQSYNTHFALSLFHTLGR----DTWIVDTGASRHICASP 569
S++ +++ HS + + SG + F+++ HTL WI+D+GA+ HI S
Sbjct: 14 SSETPSRANLSHSTPNQSHDSGLGSRSIFSINTTHTLNNLSHTTPWIIDSGATDHITTSI 73
Query: 570 ELIDKITIMSTPVNVHLPDGTSMSVSHTGTVQLSDEITLTNVLVVPSFKYNLLSVSQLLH 749
+L K + + P+N++LP+G+ + +G++QLS + + +VL VP+F +NLLS+ +LL
Sbjct: 74 DLFFKYSEIK-PLNINLPNGSIVQAHFSGSIQLSPDFVIHDVLFVPNFSFNLLSLPKLLL 132
Query: 750 GNGLECVFSQK----QCWLQDPKNGRVKAVGRICGGLYLFGMTEFSGSLTTGNTA----N 905
+FS + C +QD ++ + GL+ + + S T TA N
Sbjct: 133 TAPCRVIFSNQFSNILCQIQDMNTLKMIGSANLKEGLFHLDIGKERRSSTNNATATPINN 192
Query: 906 LQLWHRRLGHTSMSCMEHIVFLKSVCNKDIKYSCSTCHVAKQCRLTFPLSTIQSKHVFEL 1085
LWH RLGH S + + + +K C CH AKQ +L++ S+ + +F+L
Sbjct: 193 SNLWHFRLGHLSSNRLNVLNQQFPFISKHSNEVCDVCHFAKQKKLSYSPSSSRVSKIFDL 252
Query: 1086 IHVDIWGPYHESSVTNTSYMLTIVDDYTRATWIYLMKKKSEAPMHLKNFFAFTHNQFQMV 1265
IH+DIWGP+ ++S+ Y LTI+DD++R TW+ L+K KSE H+ NF NQ++
Sbjct: 253 IHMDIWGPFSKASIHGHKYFLTILDDFSRYTWVVLLKSKSEVKTHVHNFINLVENQYETK 312
Query: 1266 VKKMRTDNGTEFMGHETQNLLLEIGILHQRSCPYTPQQNGVVERKHRHILEIARALMFQS 1445
VK +R+DNG EF + N GI+HQ SC YTPQQNG VERKH+HIL +ARALMFQS
Sbjct: 313 VKCIRSDNGPEFFLRDFFN---SKGIIHQTSCVYTPQQNGRVERKHQHILNVARALMFQS 369
Query: 1446 GVPRKFWPYSLLTTVHILNSLPSALLHWKSPFELLHKEPPKYERFKVFGCLCYASTTGPH 1625
+P FW Y++ + ++N +PS ++ K+PFELL+K PP + KVFGCLCYAST
Sbjct: 370 KLPSNFWSYAIKHAIFLINRVPSPIISHKTPFELLNKIPPDFSMLKVFGCLCYASTHN-Q 428
Query: 1626 KGKFDARASECVFLGFVPGVKGYRLFNMNTGEIFLSRDVVFYETQFPFQAHP-------- 1781
+ KF+ R+ + +F+GF G KG+ + ++NT EI +SR+V+F+ET FPF
Sbjct: 429 RHKFEPRSRKGIFMGFQNGTKGFVILDINTREILVSRNVIFHETSFPFHTSAPTSPFITQ 488
Query: 1782 -----SPLKDVPLPVPAHDIGEETEGTDTQDVEPTPPPPAQQLGRGH-RIKHKPAWLN-D 1940
SP D+ P D +P PA H I P + D
Sbjct: 489 PSLTISPNPDILTTPPTSPNDTSPSQNPNPDASASPSSPAAPTSPFHDSISSYPTSTDFD 548
Query: 1941 YVTNSIHTAHLIETPAES---VKPTPYRLDCFPYTYSSILSPAYSAFLTQITESQSEPTT 2111
V + ++ I P S + P PY L + Y S+ S S
Sbjct: 549 IVPHHRSSSPAIPPPRRSERDIHPPPY-LSEYQYKLPSLKSVQSST-------------- 593
Query: 2112 YGEAVQDKAWIEAMNRELLALEQNETWILTSLPPGKKAIGSKWVYKIKRNSDGSVDRYKA 2291
++Q+ W EAM EL ALE N TW + P + IG KWV+KIKR +GS++RYKA
Sbjct: 594 --RSIQNPCWREAMTCELKALELNHTWDVVETPSHVRPIGCKWVFKIKRLPNGSIERYKA 651
Query: 2292 RLVAKGYLQVEGIDFMESFSPVAKLVSVRMIIALATQKNWELHHIDINNAFLHGYLEEEV 2471
RLVAKGY Q+EGID+ E+FSPV K+ +VR+++ALA+ W + +D++NAFLHG L E+V
Sbjct: 652 RLVAKGYSQIEGIDYFETFSPVVKMTTVRVVLALASINQWHIQQLDVSNAFLHGDLLEDV 711
Query: 2472 YMIPPEGYFKAKKGEVCLLKRSLYGLKQASRQWNLEFSQKLLSFGFIQSTHDNCLFVKRT 2651
YM P+G C L++SLYGLKQ+SR+W + S LLS G+ Q+ D+ LF KR
Sbjct: 712 YMELPQGLTGYSSSHSCKLRKSLYGLKQSSRKWYEKLSNLLLSNGYKQAHSDHSLFTKRH 771
Query: 2652 GDDFLALLIYVDDVLITGNSVTLIQSLKDYLHQLFTIKDLGNAKYFLGLEILRSSKGTHL 2831
G F ALLIYVDD+++TGNS I +K LH F +KDLG KYFLG+E+ SSKG L
Sbjct: 772 GSAFTALLIYVDDIVLTGNSAAEITRIKHILHSNFHVKDLGQLKYFLGIEVAHSSKGISL 831
Query: 2832 CQRKYVMDLLKDAGMLGCKPSSTPFPQGYNISAQHSANFTDVEKYRRLVGRLLYLNLSRP 3011
CQRKY +DLL D+GMLGCKPSSTP + S D YRRLVGRL+YL +RP
Sbjct: 832 CQRKYCLDLLSDSGMLGCKPSSTPMDSTLRLHDDASGYLDDPLPYRRLVGRLVYLTNTRP 891
Query: 3012 DISFGVQQLSQFVHAPLQAHWDAAIHLLKYLKGTPSLGLYYSAESSNKFEAFCDADWGTC 3191
DI+F QQLSQF+ P AH AA+ +L+YLK P GL++ + F DADW TC
Sbjct: 892 DIAFSTQQLSQFMSKPTNAHHAAAMRVLRYLKSCPGTGLFFPRVCPIQVSGFSDADWATC 951
Query: 3192 LLTRKSLTGYCIFFGDALXXXXXXXXXXXXXXXAEAEYRSMAATVCEMQWLYNLSQDLHI 3371
+ +R+S+TGYC F G+AL +EAEYR++A+ CE+QW+ L +DLHI
Sbjct: 952 VASRRSITGYCFFIGNALISWKTKKQTTVSRSSSEAEYRALASATCELQWIIYLLRDLHI 1011
Query: 3372 AAPLPITLHCDNKAALHITANPVFHERTKHLDIDCHIVRNQYKLGFINPVHISTVRQTA 3548
+ L+CDN +ALHI ANPVFHERTKHLDIDCHIVR + + G + + + + +Q A
Sbjct: 1012 SLSQISLLYCDNTSALHIAANPVFHERTKHLDIDCHIVREKTQAGLMKLLPVPSAKQLA 1070
>gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1445
Score = 834 bits (2154), Expect = 0.0
Identities = 466/1173 (39%), Positives = 657/1173 (56%), Gaps = 38/1173 (3%)
Frame = +3
Query: 144 RKSKEERAKLICEHCGFHGHEIKECFKLHGYPDWYK------ELKEQRGNQSINMVEGGE 305
R + R+ C C H I CF+++G+P Y+ S+N +
Sbjct: 274 RGNNTGRSTRFCTKCKKTNHTIDTCFQIYGFPPGYRTNGKSTSTTSNTSKSSVNNFDSTT 333
Query: 306 MTQTKYKGEEETRKIELPDFASMIQKEIAKYLSNQGSTQSGDIHSLSHFADYSGQSYNTH 485
+ +++ +F S Q + L Q S ++S +H S N
Sbjct: 334 SLVSATSAKDDVTSQNTFNF-SKDQYQALLGLLQQSQDPSPSVNS-AHKCSVSTPGIN-- 389
Query: 486 FALSLFHTLGRDTWIVDTGASRHICASPELIDKITIMSTPVNVHLPDGTSMSVSHTGTVQ 665
L + +WI+D+GA+ HIC S + I PV+V LP+ S+ ++GT+
Sbjct: 390 --------LFQSSWILDSGATDHICPSKSYFSSL-IPIKPVSVKLPNNQSVFACYSGTIH 440
Query: 666 LSDEITLTNVLVVPSFKYNLLSVSQLLHGNGLECVFSQKQCWLQDPKNGRVKAVGRICGG 845
L + +TL N L VP F +L+S+ +L+ +F + C + ++ + G
Sbjct: 441 LGN-LTLYNALYVPDFSVHLISIPKLVTTLNCIVIFCEYDCIIVQRHTFKMIGAAKQQSG 499
Query: 846 LY-LFGMTEFSGSLTTGNTANLQL--------------WHRRLGHTSMSCMEHIVFLKSV 980
L+ L + G TTGN L WH +LGH S ++ + +
Sbjct: 500 LFQLLQHNDSLGFSTTGNNCTTVLATTLNDNFSNSTSVWHAKLGHPSNKVLQTLSSQYTS 559
Query: 981 CNKDIKYSCSTCHVAKQCRLTFPLSTIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVD 1160
+ + C C AKQ +L FP ST + FELIHVDIWGP SS+ Y LT+VD
Sbjct: 560 IKFPLVHVCDICSFAKQKKLPFPDSTSITNFFFELIHVDIWGPLAISSIEGYKYFLTVVD 619
Query: 1161 DYTRATWIYLMKKKSEAPMHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIG 1340
DY+R TWI+L+K K E L NF NQ +K++R+DNG EF+ N G
Sbjct: 620 DYSRFTWIHLLKSKQEVKSLLPNFIILIENQHDCKLKRLRSDNGKEFI---LTNFYNAKG 676
Query: 1341 ILHQRSCPYTPQQNGVVERKHRHILEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSAL 1520
ILH+ SC TPQQNG+VERKH+H+L + RAL+FQS +P+ FW Y++ VHI+N LP+
Sbjct: 677 ILHETSCVETPQQNGIVERKHQHLLNVCRALLFQSQIPKTFWSYAIKHAVHIINRLPTRF 736
Query: 1521 LHWKSPFELLHKEPPKYERFKVFGCLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRL 1700
L KSPFE+++ P +VFGCL YAST + K RAS+C+FLG+ G KGY L
Sbjct: 737 LKQKSPFEMIYHHKPDLHDLRVFGCLAYASTLAAGRTKLAPRASKCIFLGYKSGTKGYVL 796
Query: 1701 FNMNTGEIFLSRDVVFYETQFPFQAHP--SPLKDVPLPVPAHDIGE---------ETEGT 1847
+N+++ LSR+V+F+ET FP+ S D L +D ET T
Sbjct: 797 YNLHSRFFSLSRNVIFHETVFPYSDFHKFSSNSDAILTESTNDFAHYELYPITVLETTNT 856
Query: 1848 DTQDVEPTPPPPAQ------QLGRGHRIKHKPAWLNDYVTNSIHTAHLIETPAESVKPTP 2009
T + P + Q R K +P +LN Y S T + S P
Sbjct: 857 HTPSEQLQQPLTEEMQDIPVQPRVSTRQKFRPNYLNQYHCYSA-------TSSNSACLYP 909
Query: 2010 YRLDCFPYTYSSILSPAYSAFLTQITESQSEPTTYGEAVQDKAWIEAMNRELLALEQNET 2189
Y + S Y+AF I+ + EP+ Y +A+ W +AM EL AL +N T
Sbjct: 910 LH----SYLSYNKCSSNYTAFCLSIS-AHVEPSNYAQAITQDCWKQAMMTELDALNRNRT 964
Query: 2190 WILTSLPPGKKAIGSKWVYKIKRNSDGSVDRYKARLVAKGYLQVEGIDFMESFSPVAKLV 2369
W L SLPPG+K IG KWVY+IK +DGSVDR+KARLVAKG+ Q EGID+ E+FSPVAKL
Sbjct: 965 WSLVSLPPGRKLIGCKWVYRIKYKADGSVDRHKARLVAKGFTQTEGIDYFETFSPVAKLT 1024
Query: 2370 SVRMIIALATQKNWELHHIDINNAFLHGYLEEEVYMIPPEGYFKAKKGEVCLLKRSLYGL 2549
+VR ++ALA+ NW LH +D++NAFLHG LEEEVYM PP+G VC L++SLYGL
Sbjct: 1025 TVRFLLALASTNNWFLHQLDVDNAFLHGDLEEEVYMRPPQGLQLPDSKLVCKLEKSLYGL 1084
Query: 2550 KQASRQWNLEFSQKLLSFGFIQSTHDNCLFVKRTGDDFLALLIYVDDVLITGNSVTLIQS 2729
KQASR WN + + +LL G+ QS+ D+ LF+K+ G LL+YVDDV+++GN+ + IQ
Sbjct: 1085 KQASRNWNQKLNSELLHLGYKQSSADHSLFIKKQGSSITILLVYVDDVVLSGNNFSEIQI 1144
Query: 2730 LKDYLHQLFTIKDLGNAKYFLGLEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSSTPFP 2909
+K +LHQ F IKDLG K+FLGLE+ RS KG L QRKY ++L+ ++G+LG KP+ TP
Sbjct: 1145 VKQHLHQKFQIKDLGPLKFFLGLEVARSKKGIILNQRKYCLELIDESGLLGSKPAPTPAD 1204
Query: 2910 QGYNISAQHSANFTDVEKYRRLVGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWDAAIH 3089
+ A H + D +RRL+GRLLYL +RPDISF VQQLSQFV P + H AA+
Sbjct: 1205 PAIKLHADHGSLLNDPTSFRRLIGRLLYLTNTRPDISFSVQQLSQFVSQPREPHLQAALR 1264
Query: 3090 LLKYLKGTPSLGLYYSAESSNKFEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXXXXXX 3269
+++YLKG P LGL+Y AE+ + +AF D+DW TC TRKS+TGYC+F G +L
Sbjct: 1265 IVRYLKGAPGLGLFYPAENHLRIQAFSDSDWATCSTTRKSVTGYCVFLGKSLVSWKSKKQ 1324
Query: 3270 XXXXXXXAEAEYRSMAATVCEMQWLYNLSQDLHIAAPLPITLHCDNKAALHITANPVFHE 3449
+EAEYR++A+ CE+QWL LS L + P P ++ D+++A+ I NP FHE
Sbjct: 1325 STVSRSSSEAEYRALASLTCELQWLKFLSDSLFVKIPAPFSVFSDSQSAIQIAKNPTFHE 1384
Query: 3450 RTKHLDIDCHIVRNQYKLGFINPVHISTVRQTA 3548
RTKH+++DCH++R + + ++ +H+ + Q A
Sbjct: 1385 RTKHIEVDCHLIRIKLQEELLHLIHVPSANQLA 1417
>gb|KYP70921.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1352
Score = 825 bits (2130), Expect = 0.0
Identities = 457/1165 (39%), Positives = 648/1165 (55%), Gaps = 37/1165 (3%)
Frame = +3
Query: 165 AKLICEHCGFHGHEIKECFKLHGYPDWYKE------LKEQRGNQSI-NMVEGGEMTQTKY 323
+ + C +CG GH C++ HG+P ++ K G SI N E
Sbjct: 178 SSVTCTYCGKQGHAENVCYRKHGFPSNHENKTNKGVYKASIGKTSIVNSTVTDECKTNDQ 237
Query: 324 KGEEETRKIELPDFASMIQKEIAKYLSNQGSTQ----SGDIHSLSHFADYSGQSYNTHFA 491
+ T+ + ++ + +N S + IHS+S + T +
Sbjct: 238 QQATITQDYRFTPQQYQVLMDLIQQCTNDSSASPSPSTNHIHSVSSCSTQPSPPPGTVSS 297
Query: 492 LSLFHTLGRDTWIVDTGASRHICASPELIDKITIMS-TPVNVHLPDGTSMSVSHTGTVQL 668
+S HT +W++D+GA+ H+ +S L + T S P+ V LP G + +H G V+
Sbjct: 298 IST-HTQISTSWVIDSGATDHVSSS--LSNFFTYNSINPITVKLPTGQHVLATHAGVVKF 354
Query: 669 SDEITLTNVLVVPSFKYNLLSVSQLLHGNGLECVFSQKQCWLQDPKNGRVKAVGRICGGL 848
+D LT+VL +P FKYNL+S+S+L+ ++ +F C +QD + GL
Sbjct: 355 TDTFYLTDVLFIPEFKYNLISISKLVSSLDVQLIFYSTHCLIQDVNTKEKIGTVDVEVGL 414
Query: 849 YLFGMTEFSGSLTTG------NTANLQLWHRRLGHTSMSCMEHIVFLKSVCNKDIKYSCS 1010
Y S+ + + N+ LWH RLGH + + + ++C+
Sbjct: 415 YTMTTAVVQPSILSAIYNPEWSIQNIDLWHFRLGHLPYDKLHSMKQYYPCLYSNKHFTCN 474
Query: 1011 TCHVAKQCRLTFPLSTIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYTRATWIYL 1190
TCH AKQ +L+FPLS + F L+H+DIWGP ++S+ Y LTIVDD+TR TW++L
Sbjct: 475 TCHHAKQKKLSFPLSHSHALQSFALLHIDIWGPCSKTSIHGHRYFLTIVDDHTRYTWVFL 534
Query: 1191 MKKKSEAPMHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSCPYT 1370
M K++ + NF + NQF VK +RTDNG EF N GI+HQ +C T
Sbjct: 535 MASKADTCNCVTNFISHIENQFATRVKVIRTDNGAEF---SMNNYFDSKGIIHQTTCIET 591
Query: 1371 PQQNGVVERKHRHILEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPFELL 1550
P+QN +VERKH+H+L + RAL+FQS +P FW ++L+ +I+N +P+ L SPFE L
Sbjct: 592 PEQNRIVERKHQHLLNVTRALLFQSNLPPTFWNFALMHATYIINCIPTPFLQHTSPFENL 651
Query: 1551 HKEPPKYERFKVFGCLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNMNTGEIFL 1730
+ +P +VFGCLCY ST H+ K D RAS CVFLGF P KGY FN+NT I +
Sbjct: 652 NGKPCDITTLRVFGCLCYVSTLKAHRTKLDPRASPCVFLGFQPHTKGYLTFNLNTRSIEV 711
Query: 1731 SRDVVFYETQFPFQAH-----------PSPLKDVPL--------PVPAHDIGEETEGTDT 1853
SR+VVFYE FP+ P+P P+ P P+ ++
Sbjct: 712 SRNVVFYENHFPYFTQDTQSASSTPSLPTPFTSNPMIHDYNFYPPSPSSHPPHSLSSPES 771
Query: 1854 QDVEPTPPPPAQQLGRGHRIKHKPAWLNDYVTNSIHTAHLIETPAESVKPTPYRLDCFPY 2033
P P P R +H P++L DY H P+ S Y LD
Sbjct: 772 PTSSPIPSRPT-------RSRHPPSYLRDY-----HMTFTSTGPSSS-PGIRYPLDSV-I 817
Query: 2034 TYSSILSPAYSAFLTQITESQSEPTTYGEAVQDKAWIEAMNRELLALEQNETWILTSLPP 2213
+Y+ + P + F+ I+ +EP +Y EA + WI+AM E+ ALE N TW +TSLPP
Sbjct: 818 SYNRLSHP-FRHFIMSIS-LLTEPKSYAEASKSDCWIKAMTDEITALEANNTWTVTSLPP 875
Query: 2214 GKKAIGSKWVYKIKRNSDGSVDRYKARLVAKGYLQVEGIDFMESFSPVAKLVSVRMIIAL 2393
K AIG KW+YK+K ++DGSV+R+KARLVAKGY Q+EG+DF+++F+PVAKL +V ++++L
Sbjct: 876 HKTAIGCKWIYKVKHHADGSVERHKARLVAKGYTQLEGLDFLDTFAPVAKLTTVHLLLSL 935
Query: 2394 ATQKNWELHHIDINNAFLHGYLEEEVYMIPPEGYFKAKKGEVCLLKRSLYGLKQASRQWN 2573
A NW L +DINNAFLHG L EEVYM P G G+VC L RSLYGLKQASRQW
Sbjct: 936 AAIHNWFLKQLDINNAFLHGDLNEEVYMHLPPGLTTTTPGQVCKLNRSLYGLKQASRQWY 995
Query: 2574 LEFSQKLLSFGFIQSTHDNCLFVKRTGDDFLALLIYVDDVLITGNSVTLIQSLKDYLHQL 2753
S ++ GF S+ D+ LF+K T ALL+YVDD+++ GN +T I + LH+
Sbjct: 996 ARLSTFIMQQGFHHSSADHSLFLKFTNSACTALLVYVDDIVLAGNDLTEIHQITALLHKT 1055
Query: 2754 FTIKDLGNAKYFLGLEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSSTPFPQGYNISAQ 2933
F IKDLG+ YFLGLE+ R+S HLCQRKY +D+L D GML C PSST +S+
Sbjct: 1056 FKIKDLGDLTYFLGLEVARNSIEIHLCQRKYTLDILSDTGMLACCPSSTLMDYKAALSSD 1115
Query: 2934 HSANFTDVEKYRRLVGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWDAAIHLLKYLKGT 3113
TD YR+L+GRL+YL + PDI+ VQ LSQF P H AA +L+YLK
Sbjct: 1116 TGTPLTDPSAYRQLIGRLIYLTNTHPDITHAVQHLSQFASKPTTYHQHAAFRILRYLKQA 1175
Query: 3114 PSLGLYYSAESSNKFEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXXXXXXXXXXXXXA 3293
P G++ SA SS + ++F D+DW C+ TR+S+TG+ ++ G +L +
Sbjct: 1176 PGRGIFLSANSSLQLKSFSDSDWAGCMDTRRSITGFAVYLGHSLISWKSKKQATVSRSSS 1235
Query: 3294 EAEYRSMAATVCEMQWLYNLSQDLHIAAPLPITLHCDNKAALHITANPVFHERTKHLDID 3473
EAEYR++A+T CE+QWL L +D + P L+CDN++ L I N VFHERTKH++ID
Sbjct: 1236 EAEYRALASTSCEIQWLTYLLEDFRLQFIRPALLYCDNQSVLQIACNQVFHERTKHIEID 1295
Query: 3474 CHIVRNQYKLGFINPVHISTVRQTA 3548
CH+VR + G + + +S+ Q A
Sbjct: 1296 CHLVREKVSNGLLKLLPVSSSAQLA 1320
>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
Length = 1125
Score = 813 bits (2099), Expect = 0.0
Identities = 445/1023 (43%), Positives = 601/1023 (58%), Gaps = 16/1023 (1%)
Frame = +3
Query: 528 IVDTGASRHICASPELIDKITIMSTPVNVHLPDGTSMSVSHTGTVQLSDEITLTNVLVVP 707
I+D+GA+ HI +SP L+ + + V +P G ++ G + L+ TL NVL VP
Sbjct: 110 IIDSGATDHITSSPTLLVNSSKNTFLPPVAMPSGEQAPITSIGNLPLNSAATLKNVLGVP 169
Query: 708 SFKYNLLSVSQLLHGNGLECVFSQKQCWLQDPKNGRVKAVGRICGGLYLF-------GMT 866
SFK +L+SVS++ F C LQD +G GLY T
Sbjct: 170 SFKVDLMSVSRVTKDLNCSVTFFPHWCILQDLTTRTTIGLGEQRDGLYYLVALASEKPKT 229
Query: 867 EFSGSLTTGN-------TANLQLWHRRLGHTSMSCMEHIVFLKSVCNKDIKYSCSTCHVA 1025
+ + TT T++ LWHRRLGH S S ++ + + +C C +A
Sbjct: 230 QTPSAATTSCRSPSSQVTSSTALWHRRLGHLSSSRLDFMAKHLLNFHFQSNNACDVCALA 289
Query: 1026 KQCRLTFPLSTIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYTRATWIYLMKKKS 1205
KQ +L F +S+I S FELIH DIWGPY +S++ Y LTIVDDY+R T ++ M KS
Sbjct: 290 KQRQLPFSVSSISSVRPFELIHCDIWGPYKIASLSGAKYFLTIVDDYSRFTXVFFMHHKS 349
Query: 1206 EAPMHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSCPYTPQQNG 1385
E L NFF+F QF + + +R DNG EF + + G +Q SC YTPQQNG
Sbjct: 350 ETQHLLVNFFSFVQTQFHVSIANIRVDNGGEFFSX--REFFKQKGTTYQHSCVYTPQQNG 407
Query: 1386 VVERKHRHILEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPFELLHKEPP 1565
VVERKHRHILE ARA FQ+ +P FW + T VHI+N LP+ LL ++PFE L+ + P
Sbjct: 408 VVERKHRHILESARAFXFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFERLYGKLP 467
Query: 1566 KYERFKVFGCLCYASTTG-PHKGKFDARASECVFLGFVPGVKGYRLFNMNTGEIFLSRDV 1742
Y +VFGCL YA+ PHK F RA C+FLG+ G K Y+L++++T ++F SRDV
Sbjct: 468 SYSHIRVFGCLAYATNVHVPHK--FAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDV 525
Query: 1743 VFYETQFPFQAHPSPLKDVPLPVPAHDIGEETEGTDTQDVEPTPPPPAQQLGRGHRIKHK 1922
VF+ET FP+++ PSP + + +H + PPP L R R H
Sbjct: 526 VFHETIFPYESIPSPSSNSDPFLLSHHLAS--------------PPPEPILRRSQRPHHP 571
Query: 1923 PAWLNDYVTNSIHTA-HLIETPAESVKPTPYRLDCFPYTYSSILSPAYSAFLTQITESQS 2099
P L DYV N + + HL + K T Y L C +Y SP + +F +++
Sbjct: 572 PMALRDYVCNQVTSPNHLPPLSSSPQKGTRYPL-CNFVSYHRY-SPQHRSFTAAVSQD-I 628
Query: 2100 EPTTYGEAVQDKAWIEAMNRELLALEQNETWILTSLPPGKKAIGSKWVYKIKRNSDGSVD 2279
EPT+Y EA W EAM EL LE N TW LTSLPPGKK IG +WVYKIK +SDG+++
Sbjct: 629 EPTSYAEATSHSHWQEAMQSELATLEANHTWSLTSLPPGKKPIGCRWVYKIKXHSDGTIE 688
Query: 2280 RYKARLVAKGYLQVEGIDFMESFSPVAKLVSVRMIIALATQKNWELHHIDINNAFLHGYL 2459
R+KARLVAKGY Q+EGID+ ++FSP AK++ VR ++ALA +NW LH +D
Sbjct: 689 RFKARLVAKGYTQLEGIDYHDTFSPTAKMIXVRCLLALAAAQNWSLHQLD---------- 738
Query: 2460 EEEVYMIPPEGYFKAKKGEVCLLKRSLYGLKQASRQWNLEFSQKLLSFGFIQSTHDNCLF 2639
+M PP + + VC L +SLYGLKQASRQW +FS + + GFIQS D LF
Sbjct: 739 ---KFMSPPPSLRRQGENLVCHLHKSLYGLKQASRQWFAKFSTAIQAVGFIQSKADYSLF 795
Query: 2640 VKRTGDDFLALLIYVDDVLITGNSVTLIQSLKDYLHQLFTIKDLGNAKYFLGLEILRSSK 2819
R G F ALLIYVDD+LITGN V I +LK +LH F IKDLG+ KYFLG+E+ RS K
Sbjct: 796 TCRKGKSFTALLIYVDDILITGNDVNAIVALKQFLHSHFRIKDLGDLKYFLGIEVSRSKK 855
Query: 2820 GTHLCQRKYVMDLLKDAGMLGCKPSSTPFPQGYNISAQHSANFTDVEKYRRLVGRLLYLN 2999
G + QRKY +++LKD G LG KP + P Q +S +YRRLVGRL+YL
Sbjct: 856 GISISQRKYTLEILKDGGFLGAKPVNFPMEQNTKLS-DSGELLKGPSQYRRLVGRLIYLT 914
Query: 3000 LSRPDISFGVQQLSQFVHAPLQAHWDAAIHLLKYLKGTPSLGLYYSAESSNKFEAFCDAD 3179
++RPDI++ V LS+F+HAP + H +AA+ +L+YLK +P GL++ +++ AF D D
Sbjct: 915 ITRPDITYSVHVLSRFMHAPRRPHMEAALRVLRYLKNSPGQGLFFPSQNDLSLRAFSDXD 974
Query: 3180 WGTCLLTRKSLTGYCIFFGDALXXXXXXXXXXXXXXXAEAEYRSMAATVCEMQWLYNLSQ 3359
W C ++R+S TGYC+F G +L EAEYR+MA T CE+ WL +L +
Sbjct: 975 WAGCPISRRSXTGYCVFLGSSLISWRTKRQKTVSLSSXEAEYRAMAGTCCELSWLRSLLK 1034
Query: 3360 DLHIAAPLPITLHCDNKAALHITANPVFHERTKHLDIDCHIVRNQYKLGFINPVHISTVR 3539
DL I P P L+CDN AALHI NPVFHERT+H+++DCH +R++ + G + HI++
Sbjct: 1035 DLRILHPKPALLYCDNTAALHIAVNPVFHERTRHIEMDCHFIRDKIQDGSVVTKHIASTD 1094
Query: 3540 QTA 3548
Q A
Sbjct: 1095 QXA 1097
>gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1013
Score = 807 bits (2085), Expect = 0.0
Identities = 433/996 (43%), Positives = 600/996 (60%), Gaps = 39/996 (3%)
Frame = +3
Query: 678 ITLTNVLVVPSFKYNLLSVSQLLHGNGLECVFSQKQCWLQDPKNGRVKAVGRICGGLYLF 857
+ L +VL VPSF NL+SVSQL++ + C + ++ + GLY+
Sbjct: 1 LILHDVLFVPSFCVNLISVSQLINSHQCHLELHIDHCLILQNSTKKMIGTAKYQHGLYVI 60
Query: 858 --------GMTE-FSGSLTTGNTANLQLWHRRLGHTSMSCMEHIVF---LKSVCNKDIKY 1001
+T+ F G+ + ++++ LWH RLGH S S I + S + D+
Sbjct: 61 IRDSATRSQLTQPFVGNTISKDSSDSVLWHHRLGHLSNSTHRIIASQFPIVSYQHHDVP- 119
Query: 1002 SCSTCHVAKQCRLTFPLSTIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYTRATW 1181
C CH AKQ RL +S +S V EL+H DIWGPY SV Y LT+VDD++R TW
Sbjct: 120 -CDICHFAKQKRLPHFISNTKSASVIELLHADIWGPYSIPSVFGHKYFLTLVDDFSRFTW 178
Query: 1182 IYLMKKKSEAPMHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSC 1361
I +MK KSE HL NF ++ QFQ +K +RTDNG+EF+ H+ L L GI+HQ SC
Sbjct: 179 IVMMKSKSETRQHLTNFISYIETQFQTKLKCLRTDNGSEFLMHD---LFLSKGIIHQGSC 235
Query: 1362 PYTPQQNGVVERKHRHILEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPF 1541
TPQQNGVVERKH+HIL ARAL FQ+ +P+ FW +++ VH++N +PS LL K+P+
Sbjct: 236 VETPQQNGVVERKHQHILNTARALYFQASLPKNFWNFAIQHAVHLINRIPSPLLDNKTPY 295
Query: 1542 ELLHKEPPKYERFKVFGCLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNMNTGE 1721
+ LH+ PP + FGCL YAST H+ KF RA + V LG+ GVKGY L+++++ E
Sbjct: 296 QALHQRPPILVHLRSFGCLAYASTLQAHRTKFQPRAKKSVLLGYKEGVKGYLLYDLHSHE 355
Query: 1722 IFLSRDVVFYETQFPF---------QAHPSPLK-DVPLPVPAHDIGEETEGTDTQDVEPT 1871
F+SR+V F+E FPF Q P+P+ P+ P +D+ + T
Sbjct: 356 FFMSRNVFFHEFTFPFHTPSQTSLTQPSPTPITIQTPISSP-YDLDNHVPPSPTSSTSIP 414
Query: 1872 PPPPAQQLG-------RGHRIKHKPAWLNDY------VTNSIHTAHLIETPAESVKPTPY 2012
P P Q L R++ P++L DY T I++ I TP S+ T
Sbjct: 415 PEQPHQPLSPAPAPSRHSTRMRQPPSYLKDYHCSLLAPTGRINSFSGISTP-HSISST-- 471
Query: 2013 RLDCFPYTYSSILSPAYSAFLTQITESQSEPTTYGEAVQDKAWIEAMNRELLALEQNETW 2192
TY SP+Y F ++ + EP TY +A + WI AM EL AL+ N+TW
Sbjct: 472 ------LTYD-FCSPSYKQFCLSVS-TNFEPHTYTQASKYDCWIMAMKTELAALDMNQTW 523
Query: 2193 ILTSLPPGKKAIGSKWVYKIKRNSDGSVDRYKARLVAKGYLQVEGIDFMESFSPVAKLVS 2372
+ LP GK+ IG KWVYKIK SDGS++RYKARLVAKGY Q EG+D+++++SPVAKL +
Sbjct: 524 SIVDLPSGKRPIGCKWVYKIKYLSDGSIERYKARLVAKGYSQTEGLDYLDTYSPVAKLTT 583
Query: 2373 VRMIIALATQKNWELHHIDINNAFLHGYLEEEVYMIPPEGYFKAKKG----EVCLLKRSL 2540
VR+++AL K W L +D+NNAFLHG L EEVYM P G +VC L +S+
Sbjct: 584 VRVLLALTAIKGWFLEQLDVNNAFLHGDLHEEVYMTLPPGLSVPSSSNTAPKVCKLHKSI 643
Query: 2541 YGLKQASRQWNLEFSQKLLSFGFIQSTHDNCLFVKRTGDDFLALLIYVDDVLITGNSVTL 2720
YGLKQASRQW + S L+S G+ ST D+ LF+K + F ALL+YVDD+++ GN
Sbjct: 644 YGLKQASRQWYSKLSSALISMGYSPSTADHSLFIKSSSSHFTALLVYVDDIILAGNDKPE 703
Query: 2721 IQSLKDYLHQLFTIKDLGNAKYFLGLEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSST 2900
I +K LH+ F IKDLGN +YFLGLEI RS+KG L QRKY +++L+D G L KPSST
Sbjct: 704 IDFIKAQLHKCFKIKDLGNLRYFLGLEIARSNKGILLNQRKYTLEILEDVGFLAAKPSST 763
Query: 2901 PFPQGYNISAQHSANFTDVEKYRRLVGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWDA 3080
PF + + H + + D YRRL+GRLLYL +RPDIS+ VQQLSQFV PL H+ A
Sbjct: 764 PFNPSLKLHSDHGSPYNDETAYRRLIGRLLYLTTTRPDISYVVQQLSQFVSKPLDIHYQA 823
Query: 3081 AIHLLKYLKGTPSLGLYYSAESSNKFEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXXX 3260
A +L+YLKG+ GL+YS+ +S K AF D+DW +C ++RKS+TG+C+F G +L
Sbjct: 824 ATRILRYLKGSHGRGLFYSSSASLKLSAFADSDWASCSISRKSITGFCVFLGSSLISWRS 883
Query: 3261 XXXXXXXXXXAEAEYRSMAATVCEMQWLYNLSQDLHIAAPLPITLHCDNKAALHITANPV 3440
+EAEYR++A+ CE+QWL+ L DL + P ++ CDNK+A+++ NP
Sbjct: 884 KKQSTISRSSSEAEYRALASLTCELQWLHYLFNDLKTSLNFPTSVFCDNKSAIYLAHNPT 943
Query: 3441 FHERTKHLDIDCHIVRNQYKLGFINPVHISTVRQTA 3548
FHERTKH++IDCH++R + + ++ + + + Q A
Sbjct: 944 FHERTKHIEIDCHVIREKIQSRLLHLLPVPSSSQLA 979
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 820 bits (2119), Expect = 0.0
Identities = 463/1173 (39%), Positives = 670/1173 (57%), Gaps = 42/1173 (3%)
Frame = +3
Query: 156 EERAKLICEHCGFHGHEIKECFKLHGYPDWYKELKEQRGNQSIN--------MVEGGEMT 311
+ + K+ C HCG+ GH C+K+HGYP +K ++ S + G+++
Sbjct: 303 QPKPKVQCSHCGYTGHNADTCYKIHGYPVGFKHKDKKTVTPSEKPKSVVANLALTDGKVS 362
Query: 312 QTKYKGEEETRKIELPDFASMIQKEIAKYLSNQGSTQSGDIHSLSHFADYSGQSYNTHFA 491
T+ G + ++ S IQ IA Y S Q + I +++ FA + + +T
Sbjct: 363 VTQGIGPDGIVELVGSMSKSQIQDVIA-YFSTQLHNPAKPI-TVASFASTNNDNGSTFTG 420
Query: 492 LSLFHT--------------LGRDTWIVDTGASRHICASPELIDKITIMSTPVNVHLPDG 629
+S + L +TWI+D+GA+ H+ L + ++ V LP G
Sbjct: 421 ISFSPSTLRLLCSLTSSKKVLSLNTWIIDSGATHHVSYDRNLFESLSD-GLSNEVTLPTG 479
Query: 630 TSMSVSHTGTVQLSDEITLTNVLVVPSFKYNLLSVSQLLHGNGLECVFSQKQCWLQDPKN 809
+++ ++ G ++L+ +TL NVL +P F+ NLLSVSQ + F + C +QDP
Sbjct: 480 SNVKIAGIGVIKLNSNLTLKNVLYIPEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPIK 539
Query: 810 GRVKAVGRICGGLYLFGMT-------EFSGSLTTGNTANL----QLWHRRLGHTSMSCME 956
+ G GGLY+ + + + S+T N LWH RLGH S +
Sbjct: 540 EQKIGRGNQIGGLYVLDTSSVECTSVDINSSVTEKQYCNAVVDSALWHSRLGHPSYEKND 599
Query: 957 --HIVFLKSVCNKDIKYSCSTCHVAKQCRLTFPLSTIQSKHVFELIHVDIWGPYHESSVT 1130
H V NK+ CS C AKQ L+FP S++ F+LIH+D WGP+ +
Sbjct: 600 VLHDVLGLPKRNKEDLVHCSICQKAKQKHLSFPSKNNMSENKFDLIHIDTWGPFATPTTE 659
Query: 1131 NTSYMLTIVDDYTRATWIYLMKKKSEAPMHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGH 1310
Y LTIVDDY+RATW+YLMK K++ +F Q+ +VK +R+DN E
Sbjct: 660 GYKYFLTIVDDYSRATWVYLMKAKNDVLQIFPDFLKMVETQYGTLVKAVRSDNAPEL--- 716
Query: 1311 ETQNLLLEIGILHQRSCPYTPQQNGVVERKHRHILEIARALMFQSGVPRKFWPYSLLTTV 1490
+ L GI+ SCP TPQQN VVERKH+HIL +ARALMF++ +P +FW +L+ V
Sbjct: 717 RFEALYQAKGIISYHSCPETPQQNSVVERKHQHILNVARALMFEANMPLEFWGDCILSAV 776
Query: 1491 HILNSLPSALLHWKSPFELLHKEPPKYERFKVFGCLCYASTTGPHKGKFDARASECVFLG 1670
++N LP+ LL KSPFELLH + P Y KVFGCLCY ST+ + KF RA CVFLG
Sbjct: 777 FLINRLPTPLLSNKSPFELLHLKVPDYTSLKVFGCLCYESTSPQQRHKFAPRARACVFLG 836
Query: 1671 FVPGVKGYRLFNMNTGEIFLSRDVVFYETQFPFQAHPSPLKDV-PLPVPAHDIGEETEGT 1847
+ G KGY+L ++ T I +SR VVFYET FPF +DV L P H+ E T
Sbjct: 837 YPSGYKGYKLLDLETNTIHISRHVVFYETVFPFTDKTIIPRDVFDLVDPVHENIENPPST 896
Query: 1848 DTQDVEPTPPPPAQQLGRGHRIKHKPAWLNDYVTNSIHTAHLIETPAESVKPTPYRLDCF 2027
E P +++ R P +L DY N++ + K Y L+
Sbjct: 897 S----ESAPKVSSKRESR------PPGYLQDYFCNAV---------PDVTKDVRYPLNA- 936
Query: 2028 PYTYSSILSPAYSAFLTQITESQSEPTTYGEAVQDKAWIEAMNRELLALEQNETWILTSL 2207
Y + LS ++A++ + + EP TY +A + K W++AM E+ ALE TW + SL
Sbjct: 937 -YINYTQLSEEFTAYICAVNK-YPEPCTYAQAKKIKEWLDAMEIEIDALESTNTWSVCSL 994
Query: 2208 PPGKKAIGSKWVYKIKRNSDGSVDRYKARLVAKGYLQVEGIDFMESFSPVAKLVSVRMII 2387
P GKK IG KWV+K+K N+DGS++R+KARLVAKGY Q EG+D+ ++FSPVAK+ +V+ ++
Sbjct: 995 PQGKKPIGCKWVFKVKLNADGSLERFKARLVAKGYTQREGLDYYDTFSPVAKMTTVKTLL 1054
Query: 2388 ALATQKNWELHHIDINNAFLHGYLEEEVYMIPPEGYFKAKKG-----EVCLLKRSLYGLK 2552
++A K W LH +DI+NAFL+G L+EE+YM P GY + G V L++SLYGLK
Sbjct: 1055 SVAAIKEWSLHQLDISNAFLNGDLKEEIYMTLPPGYSMKQGGVLPQNPVLKLQKSLYGLK 1114
Query: 2553 QASRQWNLEFSQKLLSFGFIQSTHDNCLFVKRTGDDFLALLIYVDDVLITGNSVTLIQSL 2732
QASRQW L+FS L GF +S D+ LF + +G ++ALL+YVDD++I GN+ I+ L
Sbjct: 1115 QASRQWYLKFSSTLKKLGFKKSHADHTLFTRISGKAYIALLVYVDDIVIAGNNDENIEEL 1174
Query: 2733 KDYLHQLFTIKDLGNAKYFLGLEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSSTPFPQ 2912
K L + F ++DLG KYFLGLEI R+ +G +CQRKY M+LL+D G+LGC+PS+ P
Sbjct: 1175 KKDLAKAFKLRDLGPMKYFLGLEIARTKEGISVCQRKYTMELLEDTGLLGCRPSTIPMEP 1234
Query: 2913 GYNISAQHSANFTD-VEKYRRLVGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWDAAIH 3089
+S + + D E YRRLVG+L+YL ++RPDI++ + +L QF +P +H AA
Sbjct: 1235 SLKLSQHNDEHVIDNPEVYRRLVGKLMYLTITRPDITYAINRLCQFSSSPKNSHLKAAQK 1294
Query: 3090 LLKYLKGTPSLGLYYSAESSNKFEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXXXXXX 3269
++ YLKGT LGL+YS++S +A+ DADWG+C+ +R+S +G C+F GD+L
Sbjct: 1295 VVHYLKGTIGLGLFYSSKSDLCLKAYTDADWGSCVDSRRSTSGICMFLGDSLISWKSKKQ 1354
Query: 3270 XXXXXXXAEAEYRSMAATVCEMQWLYNLSQDLHIAAPLPITLHCDNKAALHITANPVFHE 3449
AE+EYR+MA E+ WL L + + P+ L CD+ AA+HI N VFHE
Sbjct: 1355 NMASSSSAESEYRAMAMGSREIAWLVKLLAEFQVKQTKPVPLFCDSTAAIHIANNAVFHE 1414
Query: 3450 RTKHLDIDCHIVRNQYKLGFINPVHISTVRQTA 3548
RTKH++ DCHI R++ + G + +H+ T Q A
Sbjct: 1415 RTKHIENDCHITRDRIEQGMLKTMHVDTTSQLA 1447
>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
Length = 1039
Score = 805 bits (2078), Expect = 0.0
Identities = 451/1039 (43%), Positives = 609/1039 (58%), Gaps = 31/1039 (2%)
Frame = +3
Query: 525 WIVDTGASRHICASPELIDKITIMSTPVNVHLPDGTSMSVSHTGTVQLSDEITLTNVLVV 704
WI+D+GA+ H+ +S EL+D I+ + LPDG + G++ ++ I L +VL V
Sbjct: 3 WIIDSGATDHVTSSAELLDP-KILPKTTTISLPDGGQAHIESIGSLHVTPHIKLDDVLKV 61
Query: 705 PSFKYNLLSVSQLLHGNGLECV--FSQKQCWLQDPKNGRVKAVGRICGGLYLFGMTEFSG 878
P F+ NLLSVS+L L+C+ F C +QD + +G+ GLY + +
Sbjct: 62 PQFQVNLLSVSKLTRA--LQCIVMFXSDFCVVQDATTRKTXGLGKQHNGLYYLAQDQ-NP 118
Query: 879 SLTTGNTANLQLWHRRLGHTSMSCMEHIVFLKSVCNKDIKYSCSTCHVAKQCRLTFPLST 1058
+L + LWH+RLGH S ++ + + D K+ C +AKQ RL+FP S
Sbjct: 119 ALAYAIHKHSDLWHQRLGHPSSGPLQVLAKVNXEIYFDSKHVCDIXPLAKQTRLSFPSSF 178
Query: 1059 IQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYTRATWIYLMKKKSEAPMHLKNFFA 1238
I S F+LIH DIWGP+ +S + Y LTIVDD+TR TWI+LM KSE L++F +
Sbjct: 179 ISSHAPFDLIHCDIWGPHRINSHSGARYFLTIVDDHTRYTWIHLMSFKSETQGILQSFIS 238
Query: 1239 FTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSCPYTPQQNGVVERKHRHILE 1418
+ QF +K +RTDNGTE + L GI + SC YTPQQNGVVERKHRH+L
Sbjct: 239 WVETQFNRCIKTLRTDNGTEISS--MKQYLDTKGINYHHSCAYTPQQNGVVERKHRHLLN 296
Query: 1419 IARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPFELLHKEPPKYERFKVFGCL 1598
+ RAL FQ+ +P KFW S+ T +++N LP+ LL KSP++LL + P Y + FGCL
Sbjct: 297 VGRALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLRTFGCL 356
Query: 1599 CYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNMNTGEIFLSRDVVFYETQFPFQAH 1778
CYA+ P KFD RA C+F+G+ G KGYR++++ T + F S DVVF+E FPF +
Sbjct: 357 CYATNLLPTH-KFDQRARRCIFVGYPLGQKGYRVYDLETNKFFSSXDVVFHEHIFPFHTN 415
Query: 1779 PSPLKD----VPLPVPAHD-IGEETEGTDTQDVEP---------------------TPPP 1880
P + +PLP +++ I ET D P +PPP
Sbjct: 416 PQEEQHDVVVLPLPQTSYEPITTETTKPQADDQPPPLLSSLESTSNERTLDLDTIVSPPP 475
Query: 1881 PAQQLGRGHRIKHKPAWLNDYVTNSIHTAHLIETPAESVKPTPYRLDCFPYTYSSILSPA 2060
PA + R RIK L ++ + HTA + + + S+ T + L Y + LSP
Sbjct: 476 PATR--RSDRIKQPNVXLRNF--HLYHTAKVXSSQSSSLSGTRHPLT--RYISYAQLSPK 529
Query: 2061 YSAFLTQITESQSEPTTYGEAVQDKAWIEAMNRELLALEQNETWILTSLPPGKKAIGSKW 2240
Y F+ IT + EPTTY +AV D W EAM EL ALEQN TW LT LP G + IG KW
Sbjct: 530 YRNFVCAIT-TLVEPTTYEQAVLDPKWQEAMAAELHALEQNHTWTLTPLPSGHRPIGCKW 588
Query: 2241 VYKIKRNSDGSVDRYKARLVAKGYLQVEGIDFMESFSPVAKLVSVRMIIALATQKNWELH 2420
VYKIK NSDG+V+RYKARLVAKG+ Q EGID+ E+FSPVAKL +VR ++A+A ++W LH
Sbjct: 589 VYKIKYNSDGTVERYKARLVAKGFTQREGIDYKETFSPVAKLTTVRCLLAIAAVRHWSLH 648
Query: 2421 HIDINNAFLHGYLEEEVYMIPPEGYFKAKKGE---VCLLKRSLYGLKQASRQWNLEFSQK 2591
+D+ NAFLHG L EEVYM P G+ + +GE VC +SLYGLKQASR W +FS
Sbjct: 649 QMDVQNAFLHGDLLEEVYMQLPPGFXR--QGETPMVCRXNKSLYGLKQASRSWFXKFSAT 706
Query: 2592 LLSFGFIQSTHDNCLFVKRTGDDFLALLIYVDDVLITGNSVTLIQSLKDYLHQLFTIKDL 2771
+ GF QS D LF K +G+ F +LIYVDD++I GN +I LK+ LH F IKDL
Sbjct: 707 IQQDGFXQSRADYSLFTKISGNSFTXVLIYVDDMIIXGNDENVIAXLKESLHTKFRIKDL 766
Query: 2772 GNAKYFLGLEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSSTPFPQGYNISAQHSANFT 2951
G +YFLG+E+ RS+ +AG+LG KP TP + +
Sbjct: 767 GQLRYFLGIEVARSTDD--------------EAGLLGAKPLLTPMEENNKLLPTVGDLLK 812
Query: 2952 DVEKYRRLVGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWDAAIHLLKYLKGTPSLGLY 3131
+ YRRLVG+L+YL ++RP+IS+ + LSQF+ P + H A HLL+YLKG GLY
Sbjct: 813 NPSIYRRLVGQLIYLTITRPEISYSIHILSQFMQEPRKPHLHAVHHLLRYLKGALGQGLY 872
Query: 3132 YSAESSNKFEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXXXXXXXXXXXXXAEAEYRS 3311
+ A+ + FCDADW C +TR+S+TGYCIF G+AL AE+EY++
Sbjct: 873 FPAKGNLLLRGFCDADWARCSITRRSVTGYCIFLGEALISWKTKKQTTVSRSSAESEYQA 932
Query: 3312 MAATVCEMQWLYNLSQDLHIAAPLPITLHCDNKAALHITANPVFHERTKHLDIDCHIVRN 3491
MA+ CE+ WL L DL + P L CD+KAALHI ANPV+HERTKH++IDCH+VR
Sbjct: 933 MASITCELTWLKYLLDDLKVEHSQPAKLFCDSKAALHIAANPVYHERTKHIEIDCHVVRE 992
Query: 3492 QYKLGFINPVHISTVRQTA 3548
+ + G I H + Q A
Sbjct: 993 RIQSGXIVTAHXPSSCQLA 1011
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 817 bits (2111), Expect = 0.0
Identities = 447/1151 (38%), Positives = 663/1151 (57%), Gaps = 22/1151 (1%)
Frame = +3
Query: 162 RAKLICEHCGFHGHEIKECFKLHGYPDWYKELKEQRGNQ-------SINMVEGGEMTQTK 320
+ + IC GH + C+K HG+P + K + G + + N+ E E+ +
Sbjct: 304 KGRPICSFYNRVGHIAERCYKKHGFPPGFTP-KGKAGEKLQKPKPLAANVAESSEVNTSL 362
Query: 321 YKGEEETRKIELPDFASMIQKEIAKYLSNQGSTQSGDIHSLSHFADYSGQSYNTHFALSL 500
K +L F +M ++ + +T S S + +S +Y+ L++
Sbjct: 363 ESMVGNLSKEQLQQFIAMFSSQLQNTPPSTYATASTS-QSDNLGICFSPSTYSFIGILTV 421
Query: 501 F-HTLGRDTWIVDTGASRHICASPELIDKITIMSTPVNVHLPDGTSMSVSHTGTVQLSDE 677
HTL TW++D+GA+ H+ L + S V+LP G ++ +S GT++L+D+
Sbjct: 422 ARHTLSSATWVIDSGATHHVSHDRSLFSSLDT-SVLSAVNLPTGPTVKISGVGTLKLNDD 480
Query: 678 ITLTNVLVVPSFKYNLLSVSQLLHGNGLECVFSQKQCWLQDPKNGRVKAVGRICGGLYLF 857
I L NVL +P F+ NL+S+S L G +F + C +QD GR+ GR LYL
Sbjct: 481 ILLKNVLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLL 540
Query: 858 GMTEFSGSLTTGNTANLQLWHRRLGHTSMSCMEHIVFLKSVCNKDIKYS--CSTCHVAKQ 1031
+ + S++ ++ +WHRRLGH S+ ++ I K S C CH+AKQ
Sbjct: 541 DVGD--QSISVNAVVDISMWHRRLGHASLQRLDAISDSLGTTRHKNKGSDFCHVCHLAKQ 598
Query: 1032 CRLTFPLSTIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYTRATWIYLMKKKSEA 1211
+L+FP S K +F+L+H+D+WGP+ +V Y LTIVDD++RATW+YL+K KSE
Sbjct: 599 RKLSFPTSNKVCKEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKSEV 658
Query: 1212 PMHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSCPYTPQQNGVV 1391
F NQ+++ VK +R+DN E + + E GI+ SCP TP+QN VV
Sbjct: 659 LTVFPAFIQQVENQYKVKVKAVRSDNAPEL---KFTSFYAEKGIVSFHSCPETPEQNSVV 715
Query: 1392 ERKHRHILEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPFELLHKEPPKY 1571
ERKH+HIL +ARALMFQS VP W +LT V ++N PS LL K+P+E+L P Y
Sbjct: 716 ERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVY 775
Query: 1572 ERFKVFGCLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNMNTGEIFLSRDVVFY 1751
E+ + FGCLCY+ST+ + KF R+ C+FLG+ G KGY+L ++ + +F+SR+V F+
Sbjct: 776 EQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFH 835
Query: 1752 ETQFPFQAHPSPLKDVPL-----PVPAHDIGEETEGTDT--QDVEPTPPPPAQQLGRGHR 1910
E FP +P + L PV + I + T + + PP + Q R
Sbjct: 836 EEVFPLAKNPGSESSLKLFTPMVPVSSGIISDTTHSPSSLPSQISDLPPQISSQ-----R 890
Query: 1911 IKHKPAWLNDYVTNSIHTAHLIETPAESVKPTPYRLDCFPYTYSSILSPAYSAFLTQITE 2090
++ PA LNDY N++ + H + P S +YS I SP++ ++ IT+
Sbjct: 891 VRKPPAHLNDYHCNTMQSDH--KYPISST-----------ISYSKI-SPSHMCYINNITK 936
Query: 2091 SQSEPTTYGEAVQDKAWIEAMNRELLALEQNETWILTSLPPGKKAIGSKWVYKIKRNSDG 2270
PT Y EA K W EA++ E+ A+E+ TW +T+LP GKKA+G KWV+ +K +DG
Sbjct: 937 IPI-PTNYAEAQDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADG 995
Query: 2271 SVDRYKARLVAKGYLQVEGIDFMESFSPVAKLVSVRMIIALATQKNWELHHIDINNAFLH 2450
+++RYKARLVAKGY Q EG+D+ ++FSPVAK+ ++++++ ++ K W L +D++NAFL+
Sbjct: 996 NLERYKARLVAKGYTQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLN 1055
Query: 2451 GYLEEEVYMIPPEGYFKAK-----KGEVCLLKRSLYGLKQASRQWNLEFSQKLLSFGFIQ 2615
G LEEE++M PEGY + K V LKRS+YGLKQASRQW +FS LLS GF +
Sbjct: 1056 GELEEEIFMKIPEGYAERKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKK 1115
Query: 2616 STHDNCLFVKRTGDDFLALLIYVDDVLITGNSVTLIQSLKDYLHQLFTIKDLGNAKYFLG 2795
+ D+ LF+K +F+ +L+YVDD++I S L + L Q F ++DLG+ KYFLG
Sbjct: 1116 THGDHTLFLKMYDGEFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLG 1175
Query: 2796 LEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSSTPFPQGYNISAQHSANFTDVEKYRRL 2975
LE+ R++ G +CQRKY ++LL+ GML CKP S P + D+E+YRR+
Sbjct: 1176 LEVARTTAGISICQRKYALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRI 1235
Query: 2976 VGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWDAAIHLLKYLKGTPSLGLYYSAESSNK 3155
VG+L+YL ++RPDI+F V +L QF AP H AA +L+Y+KGT GL+YSA S
Sbjct: 1236 VGKLMYLTITRPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLT 1295
Query: 3156 FEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXXXXXXXXXXXXXAEAEYRSMAATVCEM 3335
+ F D+DW +C +R+S T + +F GD+L AEAEYR++A CEM
Sbjct: 1296 LKGFADSDWASCQDSRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEM 1355
Query: 3336 QWLYNLSQDLHIAAPLPITLHCDNKAALHITANPVFHERTKHLDIDCHIVRNQYKLGFIN 3515
WL+ L L + P+PI L+ D+ AA++I NPVFHERTKH+ +DCH VR + G +
Sbjct: 1356 VWLFTLLVSLQASPPVPI-LYSDSTAAIYIATNPVFHERTKHIKLDCHTVRERLDNGELK 1414
Query: 3516 PVHISTVRQTA 3548
+H+ T Q A
Sbjct: 1415 LLHVRTEDQVA 1425
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 797 bits (2058), Expect = 0.0
Identities = 437/1039 (42%), Positives = 616/1039 (59%), Gaps = 30/1039 (2%)
Frame = +3
Query: 522 TWIVDTGASRHICASPE-LIDKITIMSTPVNVHLPDGTSMSVSHTGTVQLSDEITLTNVL 698
+WI+DTGA+ H+ L D I + PV LP+G S+ + +G+V+LS+ ITL NVL
Sbjct: 51 SWIIDTGATHHVTGDLSWLFDTIALFECPVG--LPNGESVVATQSGSVRLSNNITLQNVL 108
Query: 699 VVPSFKYNLLSVSQLLHGNGLECV--FSQKQCWLQDPKNGRVKAVGRICGGLYLFGMTEF 872
VP NLLSVSQL + L C+ F+ C +QD + G GLY FG E
Sbjct: 109 YVPKLNCNLLSVSQLT--DDLHCIVQFNSYMCAIQDHTRELI-GTGVRRDGLYYFGGAEG 165
Query: 873 SG--SLTTGNTAN-LQLWHRRLGHTS---MSCMEHIVFLKSVCNKDIKYSCSTCHVAKQC 1034
++ N A+ L+LWH+R+GH S + + + LK NK +C C AK
Sbjct: 166 DSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNLKGSLNK----ACEICFRAKHP 221
Query: 1035 RLTFPLSTIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYTRATWIYLMKKKSEAP 1214
R FPLS ++ +FE IH D+WG Y S Y LTIVDD++RA WIYL+ K+E
Sbjct: 222 RDKFPLSDNKATRIFEKIHCDLWGSYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVF 281
Query: 1215 MHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILHQRSCPYTPQQNGVVE 1394
+F A QF VK +++DNGTEF + GIL Q SC TPQQNG VE
Sbjct: 282 RMFMSFIAMVDRQFSQTVKVVQSDNGTEFKC--LLDYFSATGILFQTSCVGTPQQNGRVE 339
Query: 1395 RKHRHILEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHWKSPFELLHKEPPKYE 1574
RKH+HIL + RAL FQ+ +P FW S+L H++N PS LLH K+PFE+L PP Y
Sbjct: 340 RKHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFEILFGTPPSYA 399
Query: 1575 RFKVFGCLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNMNTGEIFLSRDVVFYE 1754
FGCL +A KF +R+ +CVFLG+ G KG++LF+++T E+F+SRDV F+E
Sbjct: 400 AIHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFE 459
Query: 1755 TQFPFQAHPSPLKDVP---LPVPAHDIGE-------------ETEGTDTQDVEPTPPPPA 1886
FPF +P + +P +P P H I T G D+ ++ + +
Sbjct: 460 DVFPF-GNPGAVNIIPENIVPTPKHKIPRLLQRLFHLGRKLFPTVGLDSLGLDNSSNGQS 518
Query: 1887 QQLGRGHRIKHKPAWLNDYVTNSIHTAHLIETPAESVKPTPYRLDCFPYTYSSIL----- 2051
+G+G R K L D+VT+++ + E+P+ + P+P PY + +
Sbjct: 519 APMGKGMRDKFPSVLLRDFVTHTV----VAESPSPAT-PSPQHPSGTPYPIAHYINCDNF 573
Query: 2052 SPAYSAFLTQITESQSEPTTYGEAVQDKAWIEAMNRELLALEQNETWILTSLPPGKKAIG 2231
S Y FL I S ++P ++ EA++D W ++M+ E+ ALE+N TW L LP GK+A+G
Sbjct: 574 SVHYRKFLATIISS-NDPKSFKEAMKDVGWQKSMHEEIRALEENGTWXLEPLPKGKRALG 632
Query: 2232 SKWVYKIKRNSDGSVDRYKARLVAKGYLQVEGIDFMESFSPVAKLVSVRMIIALATQKNW 2411
S+WVY+ K S+G ++R K+RLV G Q GID+ E+FSPVAK+ VR +A+A KNW
Sbjct: 633 SQWVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHETFSPVAKMTMVRAFLAIAASKNW 692
Query: 2412 ELHHIDINNAFLHGYLEEEVYMIPPEGYFKAKKGEVCLLKRSLYGLKQASRQWNLEFSQK 2591
ELH +D++NAFLHG LEEEVYM P G+ ++ VC L++SLYGLKQA R W +
Sbjct: 693 ELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTA 752
Query: 2592 LLSFGFIQSTHDNCLFVKRTGDDFLALLIYVDDVLITGNSVTLIQSLKDYLHQLFTIKDL 2771
L +GF+QS D LF TG+ + +L+YVDD++I+GN +++ K YL F +KDL
Sbjct: 753 LKGYGFLQSYSDYSLFTYTTGNVQINVLVYVDDLIISGNDSAALKTFKAYLSDCFKMKDL 812
Query: 2772 GNAKYFLGLEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSSTPFPQGYNISAQHSANFT 2951
G KYFLG+E+ RSS G LCQRKY +D++ +AG+LG KP P Q + + + +
Sbjct: 813 GVLKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNHRLGLANGELLS 872
Query: 2952 DVEKYRRLVGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWDAAIHLLKYLKGTPSLGLY 3131
+ E YRRLVGRL+YL ++RPD+++ V LSQF+H P HW+AA+ +++YLKGTP G+
Sbjct: 873 NPESYRRLVGRLIYLAVTRPDLAYSVHILSQFMHEPRIEHWEAALRVVRYLKGTPGQGIL 932
Query: 3132 YSAESSNKFEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXXXXXXXXXXXXXAEAEYRS 3311
A+S + +CD+DW C +TR+SL+G+ +F G + AEAEYR+
Sbjct: 933 LRADSDLSLQGWCDSDWAACPVTRRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRA 992
Query: 3312 MAATVCEMQWLYNLSQDLHIAAPLPITLHCDNKAALHITANPVFHERTKHLDIDCHIVRN 3491
MAA CE++WL L L + P I L CD+++ALH+ NPVFHERTKH+++DCH VR+
Sbjct: 993 MAAVTCELKWLKGLLLSLGVHHPKAIKLFCDSQSALHMAKNPVFHERTKHIEVDCHFVRD 1052
Query: 3492 QYKLGFINPVHISTVRQTA 3548
G I P ++ TV Q A
Sbjct: 1053 AITDGLIAPSYVPTVTQLA 1071
>gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1002
Score = 792 bits (2046), Expect = 0.0
Identities = 426/987 (43%), Positives = 595/987 (60%), Gaps = 22/987 (2%)
Frame = +3
Query: 654 GTVQLSDEITLTNVLVVPSFKYNLLSVSQLLHGNGLECVFSQKQCWLQDPKNGRVKAVGR 833
G++ S++ L +VL +P F +NL+SVS+L+ G FS C +QD ++ ++ +
Sbjct: 1 GSIFFSEDFFLADVLYIPEFNFNLVSVSRLIRQLGCRLTFSGDLCDIQDSQSMKMIGAAK 60
Query: 834 ICGGLYLFGMTE----FSGSLTTGNTANLQLWHRRLGHTSMSCME----HIVFLKSVCNK 989
GLY+ + S+ ++ + LWH RLGH + ++ + F+ NK
Sbjct: 61 HNMGLYVLDWKPKVCLYLHSVNNFHSYDNDLWHIRLGHLAHEKLQAMKSNFPFIDCKKNK 120
Query: 990 DIKYSCSTCHVAKQCRLTFPLSTIQSKHVFELIHVDIWGPYHESSVTNTSYMLTIVDDYT 1169
D C+ C++AKQ +L F S ++ +F+L+HVDIWGP +S+ + LTIVDD +
Sbjct: 121 D---PCNVCYLAKQRQLPFSHSVTKADEIFDLLHVDIWGPTTPASIFGHKFFLTIVDDKS 177
Query: 1170 RATWIYLMKKKSEAPMHLKNFFAFTHNQFQMVVKKMRTDNGTEFMGHETQNLLLEIGILH 1349
R TW+Y MK KSE HL +F NQF VK +R+DNG EF+ +N E GILH
Sbjct: 178 RHTWVYFMKHKSEVADHLSSFITLIENQFGKKVKCVRSDNGPEFL---LKNFYHEKGILH 234
Query: 1350 QRSCPYTPQQNGVVERKHRHILEIARALMFQSGVPRKFWPYSLLTTVHILNSLPSALLHW 1529
Q SC TPQQNG+VERKH+HI+ +ARAL+ QS +P+ FW Y++ V ++N PS+ L
Sbjct: 235 QTSCVETPQQNGIVERKHQHIMTVARALVMQSNLPKSFWFYAVSHAVFLINRQPSSFLEN 294
Query: 1530 KSPFELLHKEPPKYERFKVFGCLCYASTTGPHKGKFDARASECVFLGFVPGVKGYRLFNM 1709
K P+E+++ P KVFGCL YA+T ++ KFD R CVFLGF P VKG L+++
Sbjct: 295 KIPYEIIYNALPDLAGIKVFGCLAYATTLHHNRKKFDPRGRRCVFLGFKPQVKGSILYDL 354
Query: 1710 NTGEIFLSRDVVFYETQFPF---------QAHPSPLKDVPLPVPAHDIGEETEGTDTQD- 1859
N+ E FLSR V ++E FPF Q P PLP+ T T T
Sbjct: 355 NSRETFLSRHVEYFEHIFPFLPTSPLDLTQTISLPRHQPPLPIDTDPTPLSTNTTPTSSP 414
Query: 1860 VEPTPPPPAQQLGRGHRIKHKPAWLNDY--VTNSIHTAHLIETPAESVKPTPYRLDCFPY 2033
V PPPP + + R + P++L+DY + H + I P S+
Sbjct: 415 VSVVPPPPFVR--KSTRPRKLPSYLHDYHHTLLTTHNSPTISQPLYSIHNH--------I 464
Query: 2034 TYSSILSPAYSAFLTQITESQSEPTTYGEAVQDKAWIEAMNRELLALEQNETWILTSLPP 2213
+YS+ LSP+ AF I+ S EP +Y EA+QD++W A+ EL ALE+N TWILT LPP
Sbjct: 465 SYSN-LSPSQKAFSLSIS-SIKEPNSYVEAIQDESWKTAIQTELTALEKNNTWILTPLPP 522
Query: 2214 GKKAIGSKWVYKIKRNSDGSVDRYKARLVAKGYLQVEGIDFMESFSPVAKLVSVRMIIAL 2393
K+ +G KWV+K+K NSDG+++R+KARLVAKGY Q E +D++++FSPV K+ +VR ++A+
Sbjct: 523 NKQVVGCKWVFKLKFNSDGTIERHKARLVAKGYTQTETLDYLDTFSPVVKMTTVRTLLAV 582
Query: 2394 ATQKNWELHHIDINNAFLHGYLEEEVYMIPPEGYFKA--KKGEVCLLKRSLYGLKQASRQ 2567
AT KNW +H +D+N FLHG L EEVYM PP G + + VC L +SLYGLKQASRQ
Sbjct: 583 ATAKNWHIHQLDVNTTFLHGDLHEEVYMTPPPGLTVSPHQSNCVCKLVKSLYGLKQASRQ 642
Query: 2568 WNLEFSQKLLSFGFIQSTHDNCLFVKRTGDDFLALLIYVDDVLITGNSVTLIQSLKDYLH 2747
WN + + L+ GF QS D LF K+ G F A+L+YVDD+++ GN T I +K L
Sbjct: 643 WNAKLTSVLIDSGFKQSMADYSLFTKQFGAKFTAILVYVDDLVLAGNDPTEINYIKSLLD 702
Query: 2748 QLFTIKDLGNAKYFLGLEILRSSKGTHLCQRKYVMDLLKDAGMLGCKPSSTPFPQGYNIS 2927
Q FTIKDLG KYFLG+E+ RSS G L QRKY +DL++D G+L KP +P +
Sbjct: 703 QKFTIKDLGQLKYFLGMEVARSSTGIALYQRKYALDLIEDTGLLASKPCKSPMDHSVKLH 762
Query: 2928 AQHSANFTDVEKYRRLVGRLLYLNLSRPDISFGVQQLSQFVHAPLQAHWDAAIHLLKYLK 3107
TD +YRRL+GRL+YL +R DISF V LSQF+ P H+ AA+ +LKY+K
Sbjct: 763 KTVGTPLTDPTQYRRLLGRLIYLTNTRADISFSVNHLSQFMDQPTDVHYQAALRILKYVK 822
Query: 3108 GTPSLGLYYSAESSNKFEAFCDADWGTCLLTRKSLTGYCIFFGDALXXXXXXXXXXXXXX 3287
P GL++ + S + + D+DW +C TR+S+TG+ F G AL
Sbjct: 823 NAPGKGLFFPSSSDLTLKGYSDSDWASCSDTRRSVTGFSFFLGPALISWKSKKQATVSKS 882
Query: 3288 XAEAEYRSMAATVCEMQWLYNLSQDLHIAAPLPITLHCDNKAALHITANPVFHERTKHLD 3467
AEAEYR++A + CE QWL L D + + PI L CDN++ALHI +NPVFHERTK+++
Sbjct: 883 SAEAEYRALAQSTCEAQWLSYLLHDFGLHSFHPIVLFCDNQSALHIASNPVFHERTKNIE 942
Query: 3468 IDCHIVRNQYKLGFINPVHISTVRQTA 3548
+DCHIVR + ++G I+ + IST Q A
Sbjct: 943 LDCHIVREKLQVGLIHLLPISTADQLA 969