BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00017219
         (736 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP09717.1| unnamed protein product [Coffea canephora]             99   2e-20
emb|CDP14369.1| unnamed protein product [Coffea canephora]             96   1e-19
ref|XP_013601383.1| PREDICTED: uncharacterized protein LOC106308...    87   1e-16
gb|KFK24637.1| hypothetical protein AALP_AA8G005400 [Arabis alpina]    88   2e-16
ref|XP_010451246.1| PREDICTED: uncharacterized protein LOC104733...    87   3e-16
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    87   7e-16
ref|XP_010481107.1| PREDICTED: uncharacterized protein LOC104759...    85   2e-15
ref|XP_010507174.1| PREDICTED: uncharacterized protein LOC104783...    84   4e-15
ref|XP_009115971.1| PREDICTED: putative ribonuclease H protein A...    84   5e-15
ref|XP_009151515.1| PREDICTED: putative ribonuclease H protein A...    83   1e-14
ref|XP_010684219.1| PREDICTED: putative ribonuclease H protein A...    82   1e-14
emb|CDP00431.1| unnamed protein product [Coffea canephora]             82   1e-14
ref|XP_013690565.1| PREDICTED: uncharacterized protein LOC106394...    82   2e-14
ref|XP_010681457.1| PREDICTED: uncharacterized protein LOC104896...    82   2e-14
ref|XP_009103159.1| PREDICTED: uncharacterized protein LOC103829...    81   3e-14
ref|XP_010431723.1| PREDICTED: uncharacterized protein LOC104716...    81   3e-14
ref|XP_009114416.1| PREDICTED: uncharacterized protein LOC103839...    81   6e-14
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...    80   9e-14
ref|XP_009145555.1| PREDICTED: putative ribonuclease H protein A...    80   1e-13
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    80   1e-13

>emb|CDP09717.1| unnamed protein product [Coffea canephora]
          Length = 613

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
 Frame = +3

Query: 6   WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
           W L +KSK+KHF+W+ L+  L     ++K+    +  C  CG+ EES+  LFF C RA  
Sbjct: 305 WKLKVKSKIKHFIWRSLNGLLPVNDLVFKRIHQGDPICDGCGEQEESIEHLFFQCSRAQE 364

Query: 186 IWKIVPVCSNNTSHPDFKLISWWE--I*CSNNIGELFQERLQLSVFLFWWIWKSRNLWVF 359
           +WK+ P+  +  +     ++ WW   +  +N I    +E ++L+V + W IWK RN W F
Sbjct: 365 VWKMAPIQWDGLTEQTRNILVWWNSMLEATNRIEG--REHVELTVNILWQIWKRRNEWKF 422

Query: 360 NKDKWNERDIVKYAIHDWLE 419
           N  + +  + +K A+ +W E
Sbjct: 423 NAKRRHPWESIKKALQEWQE 442


>emb|CDP14369.1| unnamed protein product [Coffea canephora]
          Length = 347

 Score = 95.9 bits (237), Expect = 1e-19
 Identities = 67/247 (27%), Positives = 101/247 (40%), Gaps = 10/247 (4%)
 Frame = +3

Query: 6   WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
           W L +K K+KHF+WK L   L     + ++    +  C  CG++ E++  L F CD A+ 
Sbjct: 20  WGLKVKHKLKHFIWKCLQGILPVNAVIRERCSKGDSVCKCCGEYPETIEHLLFFCDNALA 79

Query: 186 IWKIVPV-------CSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSR 344
           IWK+ PV         NN  H       WWE        E  QER++L+V + W IWKSR
Sbjct: 80  IWKVAPVSWAGLECLRNNFGH-------WWEEIREARAMESGQERIELTVNVLWQIWKSR 132

Query: 345 NLWVFNKDKWNERDIVKYAIHDWLEFKV---LNVPNSGRIKQSKDPHVVVAEPSLNTFVV 515
           N   F     +   +V  A  +W EF+    ++  N       K+      EP +    +
Sbjct: 133 NRRQFEDKGMDPMTVVNKATREWREFQEAQDVDGGNGSHTTNGKEGLGGWREPEVGWVKI 192

Query: 516 GCHSLCISAINDLKLGSSFGGWLGNEHGKLLKAWTSSRDFIENPMEAILIGMRLALCTAS 695
              +           G      LGN  G    AW        +  +   + +R A+  A 
Sbjct: 193 NSDAAVQQKAERAGWGMIARDCLGNALG----AWAVPDTCCSSAKQEEALALRSAMLMAK 248

Query: 696 EFGPRKV 716
           + G R+V
Sbjct: 249 QQGWRRV 255


>ref|XP_013601383.1| PREDICTED: uncharacterized protein LOC106308810 [Brassica oleracea
           var. oleracea]
          Length = 327

 Score = 87.0 bits (214), Expect = 1e-16
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
 Frame = +3

Query: 3   CWNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAM 182
           CW +    K+KHFLW+++  C+    NL  +G+  +  C  CG  EES+  +FF C  A+
Sbjct: 13  CWKIRCSPKLKHFLWQLVTGCIGVRKNLQARGIQGDICCARCGAPEESINHVFFECPPAL 72

Query: 183 IIWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELF-----QERLQLSVFLFWWIWKSRN 347
            +W +  + SN T  P   L +        N+  LF     Q      V++ W+IWK+RN
Sbjct: 73  QVWALSKIPSNPTIFPTSSLFT--------NMDHLFWRVLPQMEDHQFVWILWYIWKARN 124

Query: 348 LWVFNKDKWNERDIVKYAIHD---WLEFKVLN 434
             VF+    +  D +K A  +   W E +V+N
Sbjct: 125 NKVFSNLDMDPMDTLKLAETESTLWAEAQVVN 156


>gb|KFK24637.1| hypothetical protein AALP_AA8G005400 [Arabis alpina]
          Length = 847

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 73/247 (29%), Positives = 112/247 (45%), Gaps = 5/247 (2%)
 Frame = +3

Query: 6    WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
            W+L+   K+K FLWK     LS   NL  +   +   CP CG   E+   L FHCD A  
Sbjct: 314  WSLNTAGKIKTFLWKAASGALSIGANLSFRIPGSIIPCPSCGQ-PETEAHLLFHCDMAAQ 372

Query: 186  IWKIVPVCSNNTSHP----DFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSRNLW 353
            +W++ PV  +N   P    DF  + W      +N+         L+ +L W+IWK+RN  
Sbjct: 373  VWELAPV--DNEFQPAGIGDFDEL-WKTAKALSNLPPSNLGLTPLAPWLCWYIWKARNNL 429

Query: 354  VFNKDKWNERDIVKYAIHDWLEFKVLNVPNSGRIKQSKDPHVVVAEPSLNTFVVGCHSLC 533
            VFNK K    DIV  AI    E+       S   K   +P        +    V CH+  
Sbjct: 430  VFNKKKTGAADIVTMAILQAREW-----AQSLECKTRPNPTGKTPICEVQPCEVECHTDA 484

Query: 534  ISAINDLKLGSSFGGWL-GNEHGKLLKAWTSSRDFIENPMEAILIGMRLALCTASEFGPR 710
                +    G    GW+  ++   + ++++S+   + +P+EA  + ++ AL  ASE G R
Sbjct: 485  AWKPDSKIAGL---GWIFTSQLSNIQQSFSSALTHVASPLEAEGLAIKAALVKASENGIR 541

Query: 711  KVNVMID 731
             ++V  D
Sbjct: 542  SISVYTD 548


>ref|XP_010451246.1| PREDICTED: uncharacterized protein LOC104733362 [Camelina sativa]
          Length = 430

 Score = 87.0 bits (214), Expect = 3e-16
 Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 7/240 (2%)
 Frame = +3

Query: 6   WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
           W  ++  K+KHF W+ LHN L TA NL K+ ML +  C  CG+  E++  L FHC  +  
Sbjct: 114 WKHNMPQKIKHFWWRCLHNALPTAENLRKRRMLTDDTCQRCGEAPENINHLLFHCRISKE 173

Query: 186 IWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSRNLWVFNK 365
           IW +       +S   F  I    I    ++ +   +   L  F+ W IWK+RN ++FN 
Sbjct: 174 IWDLTTNFHGISSSFSFSSID-KNIDLLLSLNKNQGKDASLFPFIGWRIWKTRNDFIFNN 232

Query: 366 DKWNERDIVKYAIHDWLEFK-VLNVPNSGRIKQ------SKDPHVVVAEPSLNTFVVGCH 524
            +W+  D +  AI D+ ++K   NV      KQ      +    +       + FV G  
Sbjct: 233 KRWSIPDTINRAILDFQQWKESYNVNKEAPKKQQVTATNASISSITQQAKEYSCFVDGSW 292

Query: 525 SLCISAINDLKLGSSFGGWLGNEHGKLLKAWTSSRDFIENPMEAILIGMRLALCTASEFG 704
               S+ ND    +  G  L N + +++ +  +S   + +P+E     +R+A+   +  G
Sbjct: 293 ----SSPNDC---AGIGWVLYNRNAQVVLSGKASISPMNSPVEVEAEALRMAILHVNRLG 345


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 86.7 bits (213), Expect = 7e-16
 Identities = 70/244 (28%), Positives = 107/244 (43%), Gaps = 2/244 (0%)
 Frame = +3

Query: 6    WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
            W   I  K+K F WK +HN L+   N+ K+GM  +  CP CG+ EE+   L + CD +  
Sbjct: 1055 WKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSR 1114

Query: 186  IWKIVP--VCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSRNLWVF 359
             W I P  + + N     F++  W E     +      E   L   + W IW  RN WVF
Sbjct: 1115 AWYISPLRIHTGNIEAGSFRI--WVESLLDTHKD---TEWWALFWMICWNIWLGRNKWVF 1169

Query: 360  NKDKWNERDIVKYAIHDWLEFKVLNVPNSGRIKQSKDPHVVVAEPSLNTFVVGCHSLCIS 539
             K K   +++V+ A+   +EF+      S    ++ + H    E   +   VG   L + 
Sbjct: 1170 EKKKLAFQEVVERAVRGVMEFEEECAHTSP--VETLNTH----ENGWSVPPVGMVKLNVD 1223

Query: 540  AINDLKLGSSFGGWLGNEHGKLLKAWTSSRDFIENPMEAILIGMRLALCTASEFGPRKVN 719
            A     +G   GG + +  G +L A       +E+P  A    +R  L  A E G R + 
Sbjct: 1224 AAVFKHVGIGMGGVVRDAEGDVLLATCCGGWAMEDPAMAEACSLRYGLKVAYEAGFRNLV 1283

Query: 720  VMID 731
            V +D
Sbjct: 1284 VEMD 1287


>ref|XP_010481107.1| PREDICTED: uncharacterized protein LOC104759943 [Camelina sativa]
          Length = 1672

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
 Frame = +3

Query: 6    WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
            W  ++  K+KH  W+ LHN L  A NL KK ML +  C  CG+  E +  L FHC  +  
Sbjct: 1346 WAYNMPQKLKHLWWRCLHNALPVANNLKKKKMLTDDTCQRCGEAPEDLNHLLFHCRISKE 1405

Query: 186  IWKIVPVCSNNTSHPDFKLIS---WWEI*CSNNIGELFQERLQLSVFLFWWIWKSRNLWV 356
            IW +    S N  HP     S      +    N+ +  ++ + L  F+ W IWK RN  +
Sbjct: 1406 IWSL----SANNHHPGSFFSSNSLTQNVDMMLNLSKNQRKDVSLFPFIGWRIWKMRNDLI 1461

Query: 357  FNKDKWNERDIVKYAIHDWLEFK 425
            FN  KW+  D +  AI D  ++K
Sbjct: 1462 FNNKKWSIPDTINKAIIDSQQWK 1484


>ref|XP_010507174.1| PREDICTED: uncharacterized protein LOC104783756 [Camelina sativa]
          Length = 397

 Score = 83.6 bits (205), Expect = 4e-15
 Identities = 59/233 (25%), Positives = 111/233 (47%), Gaps = 7/233 (3%)
 Frame = +3

Query: 6   WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
           W+L +  K+KHF W+ LHN L  A  L  + +     C  CG+ +E+++ L FHC  +  
Sbjct: 147 WSLQVPPKIKHFWWRALHNALPVAETLVLRNINIPRECHFCGEAQETIIHLLFHCRTSRE 206

Query: 186 IWKI--VPVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSRNLWVF 359
           +W++  VP+ +      +F       +  + N+      +  +  F+ W IWK+ N  ++
Sbjct: 207 VWELSHVPITAGQLDSHNFLARIIQILLSAKNVD---SPKEYIFPFIGWRIWKACNALLY 263

Query: 360 NKDKWNERDIVKYAIHDWLEFKVLNVPNSGRIK-QSKDPHVVVAEPSLNTFVVGCHS--L 530
           N  +W+  DI++ A+   ++F++     +G +   +K  H      + N  ++   +   
Sbjct: 264 NSKRWSIPDIIRKAL---MDFRLWKEAQNGLLSYDNKHGHQEKINIATNNAILNQTNSFY 320

Query: 531 CISAINDLKLGSSFG-GW-LGNEHGKLLKAWTSSRDFIENPMEAILIGMRLAL 683
           C +  + L   S  G GW L N  GK +   +SS +   + +EA  I ++ AL
Sbjct: 321 CYTDGSWLNNQSRAGIGWTLPNTQGKCILKGSSSIEPTNSALEAEAIAIKEAL 373


>ref|XP_009115971.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 614

 Score = 84.0 bits (206), Expect = 5e-15
 Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
 Frame = +3

Query: 3   CWNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAM 182
           CW +    K+KHFLW+++  C++   NL  +G+  +  C  CG  EES+  +FF C  A+
Sbjct: 380 CWKIRCPPKLKHFLWQLVTGCIAVKKNLKARGIQGDTCCARCGAEEESINHVFFECPPAL 439

Query: 183 IIWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELF------QERLQLSVFLFWWIWKSR 344
            +W +  + SN T  P   L +        N+  LF       E  Q + ++ W+IWK R
Sbjct: 440 QVWALSKIPSNPTMFPTSSLFT--------NMDHLFWRVSPPMEDHQFA-WILWYIWKGR 490

Query: 345 NLWVFNKDKWNERDIVKYA 401
           N  VF+    + RD +K A
Sbjct: 491 NNKVFSNMDMDPRDTLKLA 509


>ref|XP_009151515.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 488

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 14/256 (5%)
 Frame = +3

Query: 6   WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
           W   + +K++HFLW++   CL+T  NL ++ +    +C  C   EE+   LFF C  AM 
Sbjct: 164 WKTKVPAKLQHFLWRLSSRCLATGSNLRRRHITRNGQCKRCCMAEETEEHLFFECPYAMG 223

Query: 186 IWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSRNLWVFNK 365
           IW+   V +   + P   L    +     ++         L +++ W IWK RN+ VF +
Sbjct: 224 IWRASGVSNITINSPTTSLEEKIDACLQYSLSTRLTHFQDLPIWILWRIWKGRNVLVFQQ 283

Query: 366 DKWNERDIVKYAIHDWLEFKVLNVP-------------NSGRIKQSKDPHVVVAEPSLNT 506
            +   R I++YA  D  E+K  +V              NS  +K ++ P           
Sbjct: 284 RETPWRSIIRYAKEDAKEWKQNDVAATTSYRERRRCIYNSSNVKWTRPPQ---------- 333

Query: 507 FVVGCHSLCISAINDLKLGSSFGGWLGNEHGKLLKAWTSSRD-FIENPMEAILIGMRLAL 683
              G     I         +   GW+  +   + K    +R   +++ +E  L  + +AL
Sbjct: 334 ---GWKKCNIDGSYHQSRATGTAGWIIRDENGVYKGSAHARGRRVQDALECELQAILMAL 390

Query: 684 CTASEFGPRKVNVMID 731
                 G RKV +  D
Sbjct: 391 QHCWSLGQRKVIMETD 406


>ref|XP_010684219.1| PREDICTED: putative ribonuclease H protein At1g65750 [Beta vulgaris
           subsp. vulgaris]
          Length = 365

 Score = 82.0 bits (201), Expect = 1e-14
 Identities = 40/140 (28%), Positives = 74/140 (52%)
 Frame = +3

Query: 6   WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
           W+  + +K+K+F W+VLHN ++   NL  +GM  + RCP+CG+ +E++      C  A  
Sbjct: 80  WHSSLPTKIKNFGWRVLHNGIAVKANLLYRGMGEDRRCPVCGEGDETIKHALTLCRDARS 139

Query: 186 IWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSRNLWVFNK 365
           IW++ P+        D  +  W E   +  + E + E   +   L W IW  RN W+F +
Sbjct: 140 IWRLSPLRMEIQEMEDENVSQWCEKLAATIVQESWWE---IFWNLLWGIWLRRNAWIFKR 196

Query: 366 DKWNERDIVKYAIHDWLEFK 425
            + + +D++  A+   +E++
Sbjct: 197 KQVSVKDLIDKAMRFTIEYQ 216


>emb|CDP00431.1| unnamed protein product [Coffea canephora]
          Length = 344

 Score = 81.6 bits (200), Expect = 1e-14
 Identities = 37/140 (26%), Positives = 68/140 (48%)
 Frame = +3

Query: 6   WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
           W+L+IK K+K F+W+ + N L+    ++++       C  CGD  E++  + FHC +A  
Sbjct: 187 WSLNIKHKIKLFIWRCITNTLTARETIFRRTKQGSPICSRCGDGMETIEHILFHCHQAQK 246

Query: 186 IWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSRNLWVFNK 365
           +WK+ P+  +   +       WW            ++ + L+  L W +WK RN   F  
Sbjct: 247 VWKLAPIQWDGIQNQTGCFKKWWAALSQATSRTEGRQHIALTANLLWQLWKDRNQMEFEG 306

Query: 366 DKWNERDIVKYAIHDWLEFK 425
            +     IV+ A  +W+E++
Sbjct: 307 KEREGLKIVQKASSEWMEYE 326


>ref|XP_013690565.1| PREDICTED: uncharacterized protein LOC106394544 [Brassica napus]
          Length = 1011

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 9/153 (5%)
 Frame = +3

Query: 3    CWNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAM 182
            CW +    K++HFLW++L  C++   NL  +G+  + RC  CGD EES+  +FF C  A 
Sbjct: 704  CWKVKCPPKLRHFLWQLLTGCIAVTKNLKSRGIQGDTRCARCGDPEESINHVFFECPPAR 763

Query: 183  IIWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELF------QERLQLSVFLFWWIWKSR 344
             +W +  + SN    P   + +        N+  LF       E  Q + ++ W+IWK R
Sbjct: 764  QVWALSKIPSNPNIFPLGSIFA--------NMDHLFWRVNPKMEDHQFA-WILWYIWKGR 814

Query: 345  NLWVFNKDKWNERDIVKYAIHD---WLEFKVLN 434
            N  VF+    + R+ +  A  +   W E +++N
Sbjct: 815  NNKVFSNIDVDPRETLNLAELESTLWAEAQIVN 847


>ref|XP_010681457.1| PREDICTED: uncharacterized protein LOC104896405 [Beta vulgaris
           subsp. vulgaris]
          Length = 838

 Score = 82.0 bits (201), Expect = 2e-14
 Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
 Frame = +3

Query: 6   WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
           W L+I  K K F+WK+ HNCL+T+ NL ++G++    C MC D  E    +F  C  AM 
Sbjct: 527 WGLNIMPKWKIFIWKLWHNCLATSSNLQRRGIINTTHCSMCLDDNEDDQHIFRFCPMAME 586

Query: 186 IWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFL--FWWIWKSRNLWVF 359
            W+  P+  +++ +    L SW        + E     L++  F+   W IWK+RN  +F
Sbjct: 587 AWESSPLSISSSENQAMSLASWIVFWLEKYLKEDGYRGLRVPNFIGTLWAIWKTRNEQIF 646

Query: 360 NK-----DKWNERDIVKYAIHDW 413
            +     D +N        +H+W
Sbjct: 647 RQGRTMLDAYNSNISESRQLHEW 669


>ref|XP_009103159.1| PREDICTED: uncharacterized protein LOC103829261 [Brassica rapa]
          Length = 399

 Score = 81.3 bits (199), Expect = 3e-14
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 12/249 (4%)
 Frame = +3

Query: 6   WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
           WNLD   K+K F WKVL   L     L ++ +  + +C  CG   ES+  L FHC  A  
Sbjct: 96  WNLDCAPKVKLFAWKVLKGALPVGERLVERHVPVDPQCKRCG-CTESITHLLFHCPFARK 154

Query: 186 IWKIVPVCSNNTSHPDFKLISWWEI*CSN--------NIGELFQERLQLSVFLFWWIWKS 341
           +W++ P+ +         L++ W+  C+N          G LF       +++ W +WKS
Sbjct: 155 VWRLAPLVNEVECSGMIDLVASWKDMCANRCLPPSGITTGPLF-------LWIIWNLWKS 207

Query: 342 RNLWVFNKDKWNERDIVKYAI---HDW-LEFKVLNVPNSGRIKQSKDPHVVVAEPSLNTF 509
           RN +VF     +  D++  AI    +W  E K   V   G+I+  +       +   NT 
Sbjct: 208 RNRFVFEGFYSSPEDVLTAAIVVAREWSTEQKQEKVSTKGKIRLDQ-------QRPYNTI 260

Query: 510 VVGCHSLCISAINDLKLGSSFGGWLGNEHGKLLKAWTSSRDFIENPMEAILIGMRLALCT 689
           VV       +A + L+  +   GW+   + +  K +    +F+ +P+ A  + +R+A+ T
Sbjct: 261 VVKTD----AAWDALRQAAGL-GWVLQSNSQ-NKTYKERVEFVSSPLMAEALALRIAVLT 314

Query: 690 ASEFGPRKV 716
                 ++V
Sbjct: 315 CRRLKMKRV 323


>ref|XP_010431723.1| PREDICTED: uncharacterized protein LOC104716077 [Camelina sativa]
          Length = 490

 Score = 81.3 bits (199), Expect = 3e-14
 Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
 Frame = +3

Query: 6   WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
           W  ++  K+KHF W+ LHN + TA NL K+ ML +  C  CG+  E++  L F C  +  
Sbjct: 164 WKQNMPQKIKHFWWRCLHNVVPTAENLKKRRMLKDDTCQRCGEAPETINHLLFQCRISKE 223

Query: 186 IWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSRNLWVFNK 365
           IW +     N    P +       I    N+    ++   L  F+ W IWK RN  +FN 
Sbjct: 224 IWDLT-ANFNGIRSPFYLNSVDQNIELLLNLNNNQRKDASLFPFIGWRIWKMRNDLIFNN 282

Query: 366 DKWNERDIVKYAIHD---WLEFKVLNVPNSGR--IKQSKDPHVVVAEPSLNTFVVGCHSL 530
            +W+  D +  AI D   W E   +N  +S +  + +           S+++        
Sbjct: 283 KRWSLPDTINKAILDFQQWKESYSINKHDSQKYTVPEHHKHQSSATNTSISSITKEAKGY 342

Query: 531 CI---SAINDLKLGSSFGGWLGNEHGKLLKAWTSSRDFIENPMEAILIGMRLALCTASEF 701
           C    ++ N     +  G  L N++ +++     S + +  P+E     +R+A+   +  
Sbjct: 343 CCFVDASWNSPNDSTGIGWALYNKNAQIVLKGMVSINPMSTPLEVEAEALRMAVLHTNRL 402

Query: 702 G 704
           G
Sbjct: 403 G 403


>ref|XP_009114416.1| PREDICTED: uncharacterized protein LOC103839673 [Brassica rapa]
          Length = 1267

 Score = 80.9 bits (198), Expect = 6e-14
 Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
 Frame = +3

Query: 3    CWNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAM 182
            CW L    K++HFLW++L  CLS   NL  +GM  +  C  CG  EES+  +FF C  A+
Sbjct: 888  CWKLRCPPKLRHFLWQILSGCLSVRKNLQARGMQGDICCARCGAPEESINHVFFECPPAI 947

Query: 183  IIWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELFQERL-----QLSVFLFWWIWKSRN 347
              W +  + SN    P   L +        NI  LF             ++ W+IWK+RN
Sbjct: 948  QTWALSKIPSNPAIFPTESLYA--------NIDHLFWRVTPKMDDHQFAWILWYIWKARN 999

Query: 348  LWVFNKDKWNERD 386
              VF+    + RD
Sbjct: 1000 SKVFSDLDIDPRD 1012


>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
           reverse transcriptase [Arabidopsis thaliana]
           gi|332641254|gb|AEE74775.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 484

 Score = 80.1 bits (196), Expect = 9e-14
 Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 11/228 (4%)
 Frame = +3

Query: 6   WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
           WNL I  K+KHFLW+ L   L+T   L  +GM  +  CP C    ES+    F C  A +
Sbjct: 163 WNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATM 222

Query: 186 IWKIV-------PVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSR 344
            W++         + SN+       ++++ +    ++  +L      L V+L W IWK+R
Sbjct: 223 AWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKL------LPVWLIWRIWKAR 276

Query: 345 NLWVFNKDKWNERDIV---KYAIHDWLEFKVLNVPNSGRIKQSKDPHVVVAEPSLNTFVV 515
           N  VFNK + +    V   K   HDWL     +       +Q  +  +    P      V
Sbjct: 277 NNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPAT--YV 334

Query: 516 GCHSLCISAINDLKLGSSFGGWLGNEHGKLLKAWTSSR-DFIENPMEA 656
            C+     A  D++   + GGW+   H     +W S +     NP+EA
Sbjct: 335 KCN---FDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEA 379


>ref|XP_009145555.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 900

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 6/229 (2%)
 Frame = +3

Query: 6    WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
            W     +K+KHFLW+VL   L+T  NL ++ ++   +C  C    E+   +FF C  A I
Sbjct: 576  WKTKAPAKLKHFLWRVLSRSLATGNNLKRRHIIQNDQCRRCCLAIETADHIFFECPYAKI 635

Query: 186  IWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSRNLWVFNK 365
            IW+   V +   ++    L    E     ++         L  +L W IWKSRN  +F +
Sbjct: 636  IWRASGVSNLIINNSSSTLEEKIEACLQCSLSTRLSHMQDLPFWLLWRIWKSRNTLIFRQ 695

Query: 366  DKWNERDIVKYAIHDWLEFKVL-NVPNSGRIKQSKDPHVVVAEPSLNTFVVGCHSLCISA 542
             +   R +++YA  D  E+K L N    G +++ +  H+          +         A
Sbjct: 696  KEIPWRSLLRYAREDAKEWKQLDNKGEEGHLRRRQSHHLTECLHWKKPMIGWIKCNTDGA 755

Query: 543  INDLKLGSSFGGWLGNEHGKLLKAWTSSR-----DFIENPMEAILIGMR 674
             N  +  +S  GW+  +   + K    +R     D +E  ++AIL+ ++
Sbjct: 756  YNSTQHQTS-AGWVIRDENGIYKGSAQARGRTRNDALECELQAILMALQ 803


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 11/228 (4%)
 Frame = +3

Query: 6    WNLDIKSKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMI 185
            WNL I  K+KHFLW+ L   L+T   L  +GM  +  CP C    ES+    F C  A +
Sbjct: 1429 WNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATM 1488

Query: 186  IWKIV-------PVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSR 344
             W++         + SN+       ++++ +    ++  +L      L V+L W IWK+R
Sbjct: 1489 AWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKL------LPVWLIWRIWKAR 1542

Query: 345  NLWVFNKDKWNERDIV---KYAIHDWLEFKVLNVPNSGRIKQSKDPHVVVAEPSLNTFVV 515
            N  VFNK + +    V   K   HDWL     +       +Q  +  +    P      V
Sbjct: 1543 NNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPAT--YV 1600

Query: 516  GCHSLCISAINDLKLGSSFGGWLGNEHGKLLKAWTSSR-DFIENPMEA 656
             C+     A  D++   + GGW+   H     +W S +     NP+EA
Sbjct: 1601 KCN---FDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEA 1645