BLASTX nr result

ID: Rehmannia27_contig00017211 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00017211
         (402 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011096567.1| PREDICTED: cullin-4-like [Sesamum indicum]        124   1e-30
ref|XP_011085242.1| PREDICTED: cullin-4 [Sesamum indicum]             121   1e-29
ref|XP_012830239.1| PREDICTED: cullin-4 [Erythranthe guttata] gi...    99   1e-21
gb|EPS64061.1| cullin 4, partial [Genlisea aurea]                      86   6e-17
gb|AAL27655.2| putative cullin protein [Olea europaea]                 72   2e-12

>ref|XP_011096567.1| PREDICTED: cullin-4-like [Sesamum indicum]
          Length = 846

 Score =  124 bits (312), Expect = 1e-30
 Identities = 64/77 (83%), Positives = 65/77 (84%), Gaps = 3/77 (3%)
 Frame = +1

Query: 181 VFPAMKKAKSQGVACSLDGNKNGQQQITPHGHFG---AHSPMIEDDPSDGAMEASPSSAV 351
           V PAMKKAKSQ VACSLDGNKNGQQQITPH HF     HSPM+EDDPSD AMEASPSS  
Sbjct: 41  VVPAMKKAKSQAVACSLDGNKNGQQQITPHVHFAEPPVHSPMMEDDPSDVAMEASPSSTA 100

Query: 352 FGRGVSASGGGVTANLS 402
           FGR VSASGGGVTANLS
Sbjct: 101 FGRRVSASGGGVTANLS 117


>ref|XP_011085242.1| PREDICTED: cullin-4 [Sesamum indicum]
          Length = 844

 Score =  121 bits (304), Expect = 1e-29
 Identities = 67/115 (58%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
 Frame = +1

Query: 73  MSEPTTSASASNNXXXXXXXXXXXXXXXXXXXXXX--PVFPAMKKAKSQGVACSLDGNKN 246
           MS+PTTS   S N                        P+FPAMKKAKSQ VACSLDGNKN
Sbjct: 1   MSQPTTSTPTSTNPSKRSASPYSSSSTTTAAAGPAAAPIFPAMKKAKSQAVACSLDGNKN 60

Query: 247 GQQQITPHGHFG---AHSPMIEDDPSDGAMEASPSSAVFGRGVSASGGGVTANLS 402
           GQQQI PH HF    AHSPMIEDDP+D A+E S  S  FGRG++AS GGVTANLS
Sbjct: 61  GQQQIAPHVHFAEPPAHSPMIEDDPNDVALETSSPSNAFGRGLAASAGGVTANLS 115


>ref|XP_012830239.1| PREDICTED: cullin-4 [Erythranthe guttata]
           gi|604344506|gb|EYU43260.1| hypothetical protein
           MIMGU_mgv1a001310mg [Erythranthe guttata]
          Length = 843

 Score = 99.0 bits (245), Expect = 1e-21
 Identities = 51/80 (63%), Positives = 61/80 (76%), Gaps = 5/80 (6%)
 Frame = +1

Query: 178 PVFPAMKKAKSQGVACSLDGNKNG--QQQITPHGHFG---AHSPMIEDDPSDGAMEASPS 342
           P+FPA+KKAKSQGV+CSLDGN NG  QQQ TPH HF    A SPMIEDDP+D  ++AS  
Sbjct: 35  PIFPALKKAKSQGVSCSLDGNMNGQQQQQPTPHVHFAETPALSPMIEDDPNDAVLDASSP 94

Query: 343 SAVFGRGVSASGGGVTANLS 402
           S+ FGR  + S GG+T+NLS
Sbjct: 95  SSAFGRVGATSCGGITSNLS 114


>gb|EPS64061.1| cullin 4, partial [Genlisea aurea]
          Length = 763

 Score = 85.5 bits (210), Expect = 6e-17
 Identities = 49/75 (65%), Positives = 53/75 (70%)
 Frame = +1

Query: 178 PVFPAMKKAKSQGVACSLDGNKNGQQQITPHGHFGAHSPMIEDDPSDGAMEASPSSAVFG 357
           P+ P MKKAKSQ VACS+D     QQQI       AHSPMIEDD +D AMEASP +  FG
Sbjct: 27  PIPPTMKKAKSQAVACSIDAP---QQQIPHFAETPAHSPMIEDD-ADSAMEASPPANSFG 82

Query: 358 RGVSASGGGVTANLS 402
           R VS SGGGVTANLS
Sbjct: 83  RVVSGSGGGVTANLS 97


>gb|AAL27655.2| putative cullin protein [Olea europaea]
          Length = 816

 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
 Frame = +1

Query: 181 VFPAMKKAKSQGVACSLDGNKNGQQQITPHGHF--GAHSPMIEDDPSDGAMEASPSSAVF 354
           + P MKKAKSQ +A SLD NKNGQQ + PH HF   A+S MI++D +D  ++AS SS  F
Sbjct: 13  ISPRMKKAKSQALAYSLD-NKNGQQSV-PHVHFDPSANSSMIDEDSNDVVLDASASSNSF 70

Query: 355 GRGVSASGGGVTANLS 402
           GR V   GGGVTANL+
Sbjct: 71  GR-VVGGGGGVTANLA 85


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