BLASTX nr result

ID: Rehmannia27_contig00016457 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00016457
         (581 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_398865.1| hypothetical protein NitoCp030 [Nicotiana tomen...    56   3e-10
ref|NP_054501.1| hypothetical protein NitaCp025 [Nicotiana tabac...    57   9e-08

>ref|YP_398865.1| hypothetical protein NitoCp030 [Nicotiana tomentosiformis]
           gi|80750927|dbj|BAE48003.1| hypothetical protein
           [Nicotiana tomentosiformis]
          Length = 70

 Score = 55.8 bits (133), Expect(2) = 3e-10
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = +2

Query: 245 KMVGKETYIWGIYQSILNCRYRNNKIQFDWSK 340
           KM G+ETY WGIY SILNC +RN+KI FDW+K
Sbjct: 35  KMAGRETYGWGIYPSILNCGFRNDKIIFDWTK 66



 Score = 35.8 bits (81), Expect(2) = 3e-10
 Identities = 20/32 (62%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
 Frame = +1

Query: 160 LVITNQTFLVFHS*---KGKNRPFKYPKL*GK 246
           LVITN+TFL F +    K KNRPFKY K  GK
Sbjct: 4   LVITNETFLRFQAKVKIKKKNRPFKYSKFNGK 35


>ref|NP_054501.1| hypothetical protein NitaCp025 [Nicotiana tabacum]
           gi|78102537|ref|YP_358678.1| hypothetical protein
           NisyCp031 [Nicotiana sylvestris]
           gi|11835|emb|CAA77355.1| hypothetical protein [Nicotiana
           tabacum] gi|77799564|dbj|BAE46653.1| hypothetical
           protein [Nicotiana sylvestris]
           gi|1001824196|gb|AMM05548.1| hypothetical protein
           (plastid) [Nicotiana tabacum] gi|225203|prf||1211235AH
           ORF 70A
          Length = 70

 Score = 56.6 bits (135), Expect = 9e-08
 Identities = 28/49 (57%), Positives = 35/49 (71%)
 Frame = +2

Query: 194 IRKKGKIDRSSIPNCREKMVGKETYIWGIYQSILNCRYRNNKIQFDWSK 340
           I+KK +  + S  N   KM G+ETY WGIY SILNC +RN+KI FDW+K
Sbjct: 20  IKKKNRPFKYSKLN--GKMAGRETYRWGIYPSILNCGFRNDKIIFDWTK 66


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