BLASTX nr result
ID: Rehmannia27_contig00014433
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00014433
(1938 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011087492.1| PREDICTED: RNA polymerase II-associated prot... 723 0.0
ref|XP_011087491.1| PREDICTED: RNA polymerase II-associated prot... 716 0.0
ref|XP_012840399.1| PREDICTED: RNA polymerase II-associated prot... 691 0.0
ref|XP_012840398.1| PREDICTED: RNA polymerase II-associated prot... 685 0.0
gb|EYU34893.1| hypothetical protein MIMGU_mgv1a005743mg [Erythra... 661 0.0
ref|XP_009767310.1| PREDICTED: RNA polymerase II-associated prot... 528 e-180
ref|XP_009611909.1| PREDICTED: RNA polymerase II-associated prot... 528 e-180
ref|XP_009767318.1| PREDICTED: RNA polymerase II-associated prot... 523 e-178
ref|XP_009611910.1| PREDICTED: RNA polymerase II-associated prot... 523 e-178
ref|XP_009767301.1| PREDICTED: RNA polymerase II-associated prot... 518 e-176
emb|CDP18255.1| unnamed protein product [Coffea canephora] 511 e-174
ref|XP_009767331.1| PREDICTED: RNA polymerase II-associated prot... 509 e-173
ref|XP_009611911.1| PREDICTED: RNA polymerase II-associated prot... 508 e-172
ref|XP_009767326.1| PREDICTED: RNA polymerase II-associated prot... 506 e-172
ref|XP_015056193.1| PREDICTED: RNA polymerase II-associated prot... 502 e-170
ref|XP_004248819.1| PREDICTED: RNA polymerase II-associated prot... 498 e-168
ref|XP_006339932.1| PREDICTED: RNA polymerase II-associated prot... 497 e-168
ref|XP_015056194.1| PREDICTED: RNA polymerase II-associated prot... 497 e-168
ref|XP_010327507.1| PREDICTED: RNA polymerase II-associated prot... 493 e-166
ref|XP_006339933.1| PREDICTED: RNA polymerase II-associated prot... 492 e-166
>ref|XP_011087492.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Sesamum
indicum]
Length = 470
Score = 723 bits (1865), Expect = 0.0
Identities = 376/475 (79%), Positives = 403/475 (84%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPSRNNASR 1655
MA VPSKHSRD QDFEGLLNNLQDWELSFKDKDKKLR D +GKLD GQ SR+ AS
Sbjct: 1 MARVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKLRSDGVSEGKLDLLGQASRSTAS- 59
Query: 1654 FSDSARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEKELG 1475
ARVNGKQTM K+PSSDNTS VRQYDYL EYEALSRLS G+ SQES VDANSEKELG
Sbjct: 60 ----ARVNGKQTMEKSPSSDNTSAVRQYDYLTEYEALSRLSGGIQSQESFVDANSEKELG 115
Query: 1474 NEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDDRYI 1295
NEFFKQKKF +AIDCYSRSIALSPTAVAYANRAM+YIK+KRFQEAENDCTEALNLDDRYI
Sbjct: 116 NEFFKQKKFVDAIDCYSRSIALSPTAVAYANRAMAYIKLKRFQEAENDCTEALNLDDRYI 175
Query: 1294 KAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASGALA 1115
KAYSRRSTARKELGKLKES DDAEFALRLEPQNQEIKKQYA+ KSLLQK+ILK+ASG LA
Sbjct: 176 KAYSRRSTARKELGKLKESIDDAEFALRLEPQNQEIKKQYAELKSLLQKEILKKASGGLA 235
Query: 1114 GSVEGARPGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSMEIEI 935
GSV GA+PGK EVDKNK V KLQ+VSTSSP G+VAEILE+HP+GNNIR+VAAETSME+E
Sbjct: 236 GSVRGAQPGKPEVDKNKNVQKLQAVSTSSPEGRVAEILEEHPEGNNIRDVAAETSMEVET 295
Query: 934 NSMRSNGSDADSGSKTAKTIPKNSKQELRPSVQXXXXXXXXXXXXXXXKNIVPPKSAYQF 755
N++RS G D+GS TAK K++KQELR SVQ KNIVPP SAYQF
Sbjct: 296 NNIRSTGFKPDTGSGTAKKKTKDTKQELRASVQELAAKAASLAKAEAAKNIVPPNSAYQF 355
Query: 754 EMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIATFFMEDMALGVEY 575
E+SWRG SGD DLQ RLLKVTSP ALPGIFKNALSA ILVD+IRCIATFF EDMALGVEY
Sbjct: 356 EVSWRGFSGDRDLQARLLKVTSPTALPGIFKNALSASILVDVIRCIATFFTEDMALGVEY 415
Query: 574 LQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLRSRYGTKQ 410
LQNL KIPRFDMIIMCL DKAD+ KIW+EVFSKG TDY +ILGNLR RYG KQ
Sbjct: 416 LQNLAKIPRFDMIIMCLSPLDKADLSKIWNEVFSKGMTDYTDILGNLRLRYGIKQ 470
>ref|XP_011087491.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Sesamum
indicum]
Length = 476
Score = 716 bits (1848), Expect = 0.0
Identities = 376/481 (78%), Positives = 403/481 (83%), Gaps = 6/481 (1%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQD------FEGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPS 1673
MA VPSKHSRD QD FEGLLNNLQDWELSFKDKDKKLR D +GKLD GQ S
Sbjct: 1 MARVPSKHSRDQAQDCLTGQDFEGLLNNLQDWELSFKDKDKKLRSDGVSEGKLDLLGQAS 60
Query: 1672 RNNASRFSDSARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDAN 1493
R+ AS ARVNGKQTM K+PSSDNTS VRQYDYL EYEALSRLS G+ SQES VDAN
Sbjct: 61 RSTAS-----ARVNGKQTMEKSPSSDNTSAVRQYDYLTEYEALSRLSGGIQSQESFVDAN 115
Query: 1492 SEKELGNEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALN 1313
SEKELGNEFFKQKKF +AIDCYSRSIALSPTAVAYANRAM+YIK+KRFQEAENDCTEALN
Sbjct: 116 SEKELGNEFFKQKKFVDAIDCYSRSIALSPTAVAYANRAMAYIKLKRFQEAENDCTEALN 175
Query: 1312 LDDRYIKAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKR 1133
LDDRYIKAYSRRSTARKELGKLKES DDAEFALRLEPQNQEIKKQYA+ KSLLQK+ILK+
Sbjct: 176 LDDRYIKAYSRRSTARKELGKLKESIDDAEFALRLEPQNQEIKKQYAELKSLLQKEILKK 235
Query: 1132 ASGALAGSVEGARPGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAET 953
ASG LAGSV GA+PGK EVDKNK V KLQ+VSTSSP G+VAEILE+HP+GNNIR+VAAET
Sbjct: 236 ASGGLAGSVRGAQPGKPEVDKNKNVQKLQAVSTSSPEGRVAEILEEHPEGNNIRDVAAET 295
Query: 952 SMEIEINSMRSNGSDADSGSKTAKTIPKNSKQELRPSVQXXXXXXXXXXXXXXXKNIVPP 773
SME+E N++RS G D+GS TAK K++KQELR SVQ KNIVPP
Sbjct: 296 SMEVETNNIRSTGFKPDTGSGTAKKKTKDTKQELRASVQELAAKAASLAKAEAAKNIVPP 355
Query: 772 KSAYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIATFFMEDM 593
SAYQFE+SWRG SGD DLQ RLLKVTSP ALPGIFKNALSA ILVD+IRCIATFF EDM
Sbjct: 356 NSAYQFEVSWRGFSGDRDLQARLLKVTSPTALPGIFKNALSASILVDVIRCIATFFTEDM 415
Query: 592 ALGVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLRSRYGTK 413
ALGVEYLQNL KIPRFDMIIMCL DKAD+ KIW+EVFSKG TDY +ILGNLR RYG K
Sbjct: 416 ALGVEYLQNLAKIPRFDMIIMCLSPLDKADLSKIWNEVFSKGMTDYTDILGNLRLRYGIK 475
Query: 412 Q 410
Q
Sbjct: 476 Q 476
>ref|XP_012840399.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
[Erythranthe guttata]
Length = 469
Score = 691 bits (1782), Expect = 0.0
Identities = 363/475 (76%), Positives = 398/475 (83%), Gaps = 1/475 (0%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKL-DRPGQPSRNNAS 1658
MA PSKHSRD PQ+ EGLLNNLQDWELSFK+KDKK+R DA GK KL D+ GQPS NN
Sbjct: 1 MAKTPSKHSRDLPQELEGLLNNLQDWELSFKEKDKKMRSDAVGKAKLKDQLGQPSGNNVG 60
Query: 1657 RFSDSARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEKEL 1478
R DSA+V+ KQTM KTPS +N STV+QYD+LKEYEALSRLSS VPS ES VDANSEKEL
Sbjct: 61 RPYDSAKVHRKQTMEKTPSYENPSTVKQYDHLKEYEALSRLSSAVPSTESFVDANSEKEL 120
Query: 1477 GNEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDDRY 1298
GNEFFKQKKF EAIDCYSRSIALSP+AVAYANRAM+YIKI+RFQEAENDCTEALNLDDRY
Sbjct: 121 GNEFFKQKKFTEAIDCYSRSIALSPSAVAYANRAMAYIKIRRFQEAENDCTEALNLDDRY 180
Query: 1297 IKAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASGAL 1118
IKAYSRRSTARKELGKLKES DDAEFALRLEPQNQEIKKQ+A+ KSLL+K ILK+ SGAL
Sbjct: 181 IKAYSRRSTARKELGKLKESMDDAEFALRLEPQNQEIKKQFAESKSLLEKAILKKVSGAL 240
Query: 1117 AGSVEGARPGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSMEIE 938
GSVEGA+PGKSEVDKN V K S G+V EILE++PKGN REV A+TSMEI+
Sbjct: 241 TGSVEGAQPGKSEVDKNNNVQKPLS-------GRVTEILEENPKGNKSREVTADTSMEIK 293
Query: 937 INSMRSNGSDADSGSKTAKTIPKNSKQELRPSVQXXXXXXXXXXXXXXXKNIVPPKSAYQ 758
NS+RSNGSD + S+TAKT PKN KQ+L+ SVQ KNIVPP SAYQ
Sbjct: 294 QNSVRSNGSDVITDSETAKTKPKNGKQQLKASVQELAAKAANLAKAEAAKNIVPPNSAYQ 353
Query: 757 FEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIATFFMEDMALGVE 578
FE+SWRGLS D +LQTRLL+VTSPAALPGIFKNALSAPILVDIIRCIATFF+EDMAL V+
Sbjct: 354 FEVSWRGLSNDRNLQTRLLQVTSPAALPGIFKNALSAPILVDIIRCIATFFVEDMALAVD 413
Query: 577 YLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLRSRYGTK 413
YLQNLTKIPRFDMIIMCL SADK+D+ KIWDEVF KGT DY EIL +LR RYG K
Sbjct: 414 YLQNLTKIPRFDMIIMCLSSADKSDVSKIWDEVFIKGTADYGEILRDLRIRYGIK 468
>ref|XP_012840398.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
[Erythranthe guttata] gi|604329640|gb|EYU34894.1|
hypothetical protein MIMGU_mgv1a005743mg [Erythranthe
guttata]
Length = 472
Score = 685 bits (1768), Expect = 0.0
Identities = 363/478 (75%), Positives = 398/478 (83%), Gaps = 4/478 (0%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKL-DRPGQPSRNNAS 1658
MA PSKHSRD PQ+ EGLLNNLQDWELSFK+KDKK+R DA GK KL D+ GQPS NN
Sbjct: 1 MAKTPSKHSRDLPQELEGLLNNLQDWELSFKEKDKKMRSDAVGKAKLKDQLGQPSGNNVG 60
Query: 1657 RFSDSARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEKEL 1478
R DSA+V+ KQTM KTPS +N STV+QYD+LKEYEALSRLSS VPS ES VDANSEKEL
Sbjct: 61 RPYDSAKVHRKQTMEKTPSYENPSTVKQYDHLKEYEALSRLSSAVPSTESFVDANSEKEL 120
Query: 1477 GNEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDDRY 1298
GNEFFKQKKF EAIDCYSRSIALSP+AVAYANRAM+YIKI+RFQEAENDCTEALNLDDRY
Sbjct: 121 GNEFFKQKKFTEAIDCYSRSIALSPSAVAYANRAMAYIKIRRFQEAENDCTEALNLDDRY 180
Query: 1297 IKAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASGAL 1118
IKAYSRRSTARKELGKLKES DDAEFALRLEPQNQEIKKQ+A+ KSLL+K ILK+ SGAL
Sbjct: 181 IKAYSRRSTARKELGKLKESMDDAEFALRLEPQNQEIKKQFAESKSLLEKAILKKVSGAL 240
Query: 1117 AGSVEGARPGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSMEIE 938
GSVEGA+PGKSEVDKN V K S G+V EILE++PKGN REV A+TSMEI+
Sbjct: 241 TGSVEGAQPGKSEVDKNNNVQKPLS-------GRVTEILEENPKGNKSREVTADTSMEIK 293
Query: 937 INSMRSNGSDADSGSKTAK---TIPKNSKQELRPSVQXXXXXXXXXXXXXXXKNIVPPKS 767
NS+RSNGSD + S+TAK T PKN KQ+L+ SVQ KNIVPP S
Sbjct: 294 QNSVRSNGSDVITDSETAKLSQTKPKNGKQQLKASVQELAAKAANLAKAEAAKNIVPPNS 353
Query: 766 AYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIATFFMEDMAL 587
AYQFE+SWRGLS D +LQTRLL+VTSPAALPGIFKNALSAPILVDIIRCIATFF+EDMAL
Sbjct: 354 AYQFEVSWRGLSNDRNLQTRLLQVTSPAALPGIFKNALSAPILVDIIRCIATFFVEDMAL 413
Query: 586 GVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLRSRYGTK 413
V+YLQNLTKIPRFDMIIMCL SADK+D+ KIWDEVF KGT DY EIL +LR RYG K
Sbjct: 414 AVDYLQNLTKIPRFDMIIMCLSSADKSDVSKIWDEVFIKGTADYGEILRDLRIRYGIK 471
>gb|EYU34893.1| hypothetical protein MIMGU_mgv1a005743mg [Erythranthe guttata]
Length = 462
Score = 661 bits (1705), Expect = 0.0
Identities = 355/478 (74%), Positives = 389/478 (81%), Gaps = 4/478 (0%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKL-DRPGQPSRNNAS 1658
MA PSKHSRD PQD WELSFK+KDKK+R DA GK KL D+ GQPS NN
Sbjct: 1 MAKTPSKHSRDLPQD----------WELSFKEKDKKMRSDAVGKAKLKDQLGQPSGNNVG 50
Query: 1657 RFSDSARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEKEL 1478
R DSA+V+ KQTM KTPS +N STV+QYD+LKEYEALSRLSS VPS ES VDANSEKEL
Sbjct: 51 RPYDSAKVHRKQTMEKTPSYENPSTVKQYDHLKEYEALSRLSSAVPSTESFVDANSEKEL 110
Query: 1477 GNEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDDRY 1298
GNEFFKQKKF EAIDCYSRSIALSP+AVAYANRAM+YIKI+RFQEAENDCTEALNLDDRY
Sbjct: 111 GNEFFKQKKFTEAIDCYSRSIALSPSAVAYANRAMAYIKIRRFQEAENDCTEALNLDDRY 170
Query: 1297 IKAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASGAL 1118
IKAYSRRSTARKELGKLKES DDAEFALRLEPQNQEIKKQ+A+ KSLL+K ILK+ SGAL
Sbjct: 171 IKAYSRRSTARKELGKLKESMDDAEFALRLEPQNQEIKKQFAESKSLLEKAILKKVSGAL 230
Query: 1117 AGSVEGARPGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSMEIE 938
GSVEGA+PGKSEVDKN V K S G+V EILE++PKGN REV A+TSMEI+
Sbjct: 231 TGSVEGAQPGKSEVDKNNNVQKPLS-------GRVTEILEENPKGNKSREVTADTSMEIK 283
Query: 937 INSMRSNGSDADSGSKTAK---TIPKNSKQELRPSVQXXXXXXXXXXXXXXXKNIVPPKS 767
NS+RSNGSD + S+TAK T PKN KQ+L+ SVQ KNIVPP S
Sbjct: 284 QNSVRSNGSDVITDSETAKLSQTKPKNGKQQLKASVQELAAKAANLAKAEAAKNIVPPNS 343
Query: 766 AYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIATFFMEDMAL 587
AYQFE+SWRGLS D +LQTRLL+VTSPAALPGIFKNALSAPILVDIIRCIATFF+EDMAL
Sbjct: 344 AYQFEVSWRGLSNDRNLQTRLLQVTSPAALPGIFKNALSAPILVDIIRCIATFFVEDMAL 403
Query: 586 GVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLRSRYGTK 413
V+YLQNLTKIPRFDMIIMCL SADK+D+ KIWDEVF KGT DY EIL +LR RYG K
Sbjct: 404 AVDYLQNLTKIPRFDMIIMCLSSADKSDVSKIWDEVFIKGTADYGEILRDLRIRYGIK 461
>ref|XP_009767310.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
[Nicotiana sylvestris]
Length = 464
Score = 528 bits (1361), Expect = e-180
Identities = 293/478 (61%), Positives = 346/478 (72%), Gaps = 6/478 (1%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPSRNNASR 1655
MA VP KH+RD QD +GLLNNLQDWELS KDKDKK++ A GK KL + ++ S
Sbjct: 1 MARVPGKHTRDQFQDMQGLLNNLQDWELSLKDKDKKMKSQARGKEKL----REDWSHTSE 56
Query: 1654 FSDSARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEKELG 1475
+VNG Q +GK S+ + YDY K+Y S LSS + S+ES +DANSEKELG
Sbjct: 57 LPTGPQVNGTQRVGK--STLISGAAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKELG 114
Query: 1474 NEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDDRYI 1295
NEFFKQKKF EAIDCYSRSIALSPTAVAYANRAM+Y+K+KRFQEAENDCTEALNLDDRYI
Sbjct: 115 NEFFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLKRFQEAENDCTEALNLDDRYI 174
Query: 1294 KAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASGALA 1115
KAYSRRSTARKELGKLKES +DAEFA RLEPQNQEIKKQY + K+L +K+ILKR SGA
Sbjct: 175 KAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSGATG 234
Query: 1114 GSVEGAR-PGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSMEIE 938
S +GA+ GK+ NK P +QSV +S +V +I P + R+V T+ME+E
Sbjct: 235 VSAQGAQNTGKT----NKTGPVIQSVGSSQKVAEVRKI----PAKESSRDVPG-TAMEVE 285
Query: 937 INSMR--SNGSDADSGSKT---AKTIPKNSKQELRPSVQXXXXXXXXXXXXXXXKNIVPP 773
M+ S GSDA + T AK KNSKQEL+ SVQ KNI PP
Sbjct: 286 DTHMQINSKGSDASATVPTLNPAKRPHKNSKQELKESVQELAARAASLAKAEAAKNIAPP 345
Query: 772 KSAYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIATFFMEDM 593
SAYQFE+SWRGLSGD DLQT LLKVTSP+ LP IFKNALSAP+L+DI+RC+ATF +EDM
Sbjct: 346 NSAYQFEVSWRGLSGDRDLQTHLLKVTSPSMLPQIFKNALSAPMLMDIVRCVATFSIEDM 405
Query: 592 ALGVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLRSRYG 419
L + YL+NLTK+PRFDMIIMCL S DKA++ KIWDEVF KG +++ LG LR +YG
Sbjct: 406 DLAIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHSATLGALRLKYG 463
>ref|XP_009611909.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
[Nicotiana tomentosiformis]
Length = 465
Score = 528 bits (1360), Expect = e-180
Identities = 295/478 (61%), Positives = 344/478 (71%), Gaps = 6/478 (1%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPSRNNASR 1655
MA VPSKHSRD QD +GLLN LQDWELS KDKDKK++ A GK KL + ++ S
Sbjct: 1 MARVPSKHSRDQFQDMQGLLNTLQDWELSLKDKDKKMKSQARGKEKL----REDWSHTSE 56
Query: 1654 FSDSARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEKELG 1475
+V G Q +GK+ S +S YDY K+Y S LSS + S+ES +DANSEKELG
Sbjct: 57 LPTGPQVTGTQRVGKSTSI--SSAAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKELG 114
Query: 1474 NEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDDRYI 1295
NEFFKQKKF EAI CYSRSIALSPTAVAYANRAM+Y+KIKRFQEAENDCTEALNLDDRYI
Sbjct: 115 NEFFKQKKFKEAIICYSRSIALSPTAVAYANRAMAYLKIKRFQEAENDCTEALNLDDRYI 174
Query: 1294 KAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASGALA 1115
KAYSRRSTARKELGKLKES +DAEFA RLEPQNQEIKKQY + K+L +K+ILKR S A
Sbjct: 175 KAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSAATG 234
Query: 1114 GSVEGA-RPGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSMEIE 938
S +GA + GK+ NK P +QSVS SS KVAE+ + K NN R+V T+ME+E
Sbjct: 235 VSAQGAQKTGKT----NKTGPVIQSVSGSSQ--KVAEVRKIPAKENN-RDVPG-TAMEVE 286
Query: 937 INSMRSNGSDADSGS-----KTAKTIPKNSKQELRPSVQXXXXXXXXXXXXXXXKNIVPP 773
M+ N D+D+ + AK KNSKQEL+ SVQ KNI PP
Sbjct: 287 DTHMQINSKDSDASATVPTLNPAKRTHKNSKQELKESVQELAARAASLAKAEAAKNIAPP 346
Query: 772 KSAYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIATFFMEDM 593
SAYQFE+SWRGLSGD +LQT LLKVTSPA LP IFKNALSAP+L+DI+RC+ATF +EDM
Sbjct: 347 NSAYQFEVSWRGLSGDRNLQTHLLKVTSPATLPQIFKNALSAPMLMDIVRCVATFSIEDM 406
Query: 592 ALGVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLRSRYG 419
L + YL+NLTK+PRFDMIIMCL S DKA++ KIWDEVF KG ++ L LR YG
Sbjct: 407 DLAIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHTATLSALRLNYG 464
>ref|XP_009767318.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X3
[Nicotiana sylvestris]
Length = 461
Score = 523 bits (1347), Expect = e-178
Identities = 292/478 (61%), Positives = 345/478 (72%), Gaps = 6/478 (1%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPSRNNASR 1655
MA VP KH+RD F+GLLNNLQDWELS KDKDKK++ A GK KL + ++ S
Sbjct: 1 MARVPGKHTRD---QFQGLLNNLQDWELSLKDKDKKMKSQARGKEKL----REDWSHTSE 53
Query: 1654 FSDSARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEKELG 1475
+VNG Q +GK S+ + YDY K+Y S LSS + S+ES +DANSEKELG
Sbjct: 54 LPTGPQVNGTQRVGK--STLISGAAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKELG 111
Query: 1474 NEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDDRYI 1295
NEFFKQKKF EAIDCYSRSIALSPTAVAYANRAM+Y+K+KRFQEAENDCTEALNLDDRYI
Sbjct: 112 NEFFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLKRFQEAENDCTEALNLDDRYI 171
Query: 1294 KAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASGALA 1115
KAYSRRSTARKELGKLKES +DAEFA RLEPQNQEIKKQY + K+L +K+ILKR SGA
Sbjct: 172 KAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSGATG 231
Query: 1114 GSVEGAR-PGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSMEIE 938
S +GA+ GK+ NK P +QSV +S +V +I P + R+V T+ME+E
Sbjct: 232 VSAQGAQNTGKT----NKTGPVIQSVGSSQKVAEVRKI----PAKESSRDVPG-TAMEVE 282
Query: 937 INSMR--SNGSDADSGSKT---AKTIPKNSKQELRPSVQXXXXXXXXXXXXXXXKNIVPP 773
M+ S GSDA + T AK KNSKQEL+ SVQ KNI PP
Sbjct: 283 DTHMQINSKGSDASATVPTLNPAKRPHKNSKQELKESVQELAARAASLAKAEAAKNIAPP 342
Query: 772 KSAYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIATFFMEDM 593
SAYQFE+SWRGLSGD DLQT LLKVTSP+ LP IFKNALSAP+L+DI+RC+ATF +EDM
Sbjct: 343 NSAYQFEVSWRGLSGDRDLQTHLLKVTSPSMLPQIFKNALSAPMLMDIVRCVATFSIEDM 402
Query: 592 ALGVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLRSRYG 419
L + YL+NLTK+PRFDMIIMCL S DKA++ KIWDEVF KG +++ LG LR +YG
Sbjct: 403 DLAIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHSATLGALRLKYG 460
>ref|XP_009611910.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
[Nicotiana tomentosiformis]
Length = 462
Score = 523 bits (1346), Expect = e-178
Identities = 294/478 (61%), Positives = 343/478 (71%), Gaps = 6/478 (1%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPSRNNASR 1655
MA VPSKHSRD F+GLLN LQDWELS KDKDKK++ A GK KL + ++ S
Sbjct: 1 MARVPSKHSRD---QFQGLLNTLQDWELSLKDKDKKMKSQARGKEKL----REDWSHTSE 53
Query: 1654 FSDSARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEKELG 1475
+V G Q +GK+ S +S YDY K+Y S LSS + S+ES +DANSEKELG
Sbjct: 54 LPTGPQVTGTQRVGKSTSI--SSAAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKELG 111
Query: 1474 NEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDDRYI 1295
NEFFKQKKF EAI CYSRSIALSPTAVAYANRAM+Y+KIKRFQEAENDCTEALNLDDRYI
Sbjct: 112 NEFFKQKKFKEAIICYSRSIALSPTAVAYANRAMAYLKIKRFQEAENDCTEALNLDDRYI 171
Query: 1294 KAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASGALA 1115
KAYSRRSTARKELGKLKES +DAEFA RLEPQNQEIKKQY + K+L +K+ILKR S A
Sbjct: 172 KAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSAATG 231
Query: 1114 GSVEGA-RPGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSMEIE 938
S +GA + GK+ NK P +QSVS SS KVAE+ + K NN R+V T+ME+E
Sbjct: 232 VSAQGAQKTGKT----NKTGPVIQSVSGSSQ--KVAEVRKIPAKENN-RDVPG-TAMEVE 283
Query: 937 INSMRSNGSDADSGS-----KTAKTIPKNSKQELRPSVQXXXXXXXXXXXXXXXKNIVPP 773
M+ N D+D+ + AK KNSKQEL+ SVQ KNI PP
Sbjct: 284 DTHMQINSKDSDASATVPTLNPAKRTHKNSKQELKESVQELAARAASLAKAEAAKNIAPP 343
Query: 772 KSAYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIATFFMEDM 593
SAYQFE+SWRGLSGD +LQT LLKVTSPA LP IFKNALSAP+L+DI+RC+ATF +EDM
Sbjct: 344 NSAYQFEVSWRGLSGDRNLQTHLLKVTSPATLPQIFKNALSAPMLMDIVRCVATFSIEDM 403
Query: 592 ALGVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLRSRYG 419
L + YL+NLTK+PRFDMIIMCL S DKA++ KIWDEVF KG ++ L LR YG
Sbjct: 404 DLAIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHTATLSALRLNYG 461
>ref|XP_009767301.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
[Nicotiana sylvestris]
Length = 484
Score = 518 bits (1333), Expect = e-176
Identities = 293/498 (58%), Positives = 346/498 (69%), Gaps = 26/498 (5%)
Frame = -3
Query: 1834 MATVPSKHSRDP--------------------PQDFEGLLNNLQDWELSFKDKDKKLRLD 1715
MA VP KH+RD QD +GLLNNLQDWELS KDKDKK++
Sbjct: 1 MARVPGKHTRDQFQGFICSILSGLWFYWHYLADQDMQGLLNNLQDWELSLKDKDKKMKSQ 60
Query: 1714 AEGKGKLDRPGQPSRNNASRFSDSARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRL 1535
A GK KL + ++ S +VNG Q +GK S+ + YDY K+Y S L
Sbjct: 61 ARGKEKL----REDWSHTSELPTGPQVNGTQRVGK--STLISGAAGPYDYSKKYNPTSHL 114
Query: 1534 SSGVPSQESVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIK 1355
SS + S+ES +DANSEKELGNEFFKQKKF EAIDCYSRSIALSPTAVAYANRAM+Y+K+K
Sbjct: 115 SSEMLSEESNIDANSEKELGNEFFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLK 174
Query: 1354 RFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQY 1175
RFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKES +DAEFA RLEPQNQEIKKQY
Sbjct: 175 RFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQY 234
Query: 1174 ADCKSLLQKDILKRASGALAGSVEGAR-PGKSEVDKNKFVPKLQSVSTSSPAGKVAEILE 998
+ K+L +K+ILKR SGA S +GA+ GK+ NK P +QSV +S +V +I
Sbjct: 235 GEVKALYEKEILKRVSGATGVSAQGAQNTGKT----NKTGPVIQSVGSSQKVAEVRKI-- 288
Query: 997 DHPKGNNIREVAAETSMEIEINSMR--SNGSDADSGSKT---AKTIPKNSKQELRPSVQX 833
P + R+V T+ME+E M+ S GSDA + T AK KNSKQEL+ SVQ
Sbjct: 289 --PAKESSRDVPG-TAMEVEDTHMQINSKGSDASATVPTLNPAKRPHKNSKQELKESVQE 345
Query: 832 XXXXXXXXXXXXXXKNIVPPKSAYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNAL 653
KNI PP SAYQFE+SWRGLSGD DLQT LLKVTSP+ LP IFKNAL
Sbjct: 346 LAARAASLAKAEAAKNIAPPNSAYQFEVSWRGLSGDRDLQTHLLKVTSPSMLPQIFKNAL 405
Query: 652 SAPILVDIIRCIATFFMEDMALGVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFS 473
SAP+L+DI+RC+ATF +EDM L + YL+NLTK+PRFDMIIMCL S DKA++ KIWDEVF
Sbjct: 406 SAPMLMDIVRCVATFSIEDMDLAIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFC 465
Query: 472 KGTTDYAEILGNLRSRYG 419
KG +++ LG LR +YG
Sbjct: 466 KGAEEHSATLGALRLKYG 483
>emb|CDP18255.1| unnamed protein product [Coffea canephora]
Length = 466
Score = 511 bits (1316), Expect = e-174
Identities = 276/482 (57%), Positives = 341/482 (70%), Gaps = 11/482 (2%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPSR-NNAS 1658
M+ VPSKHSRD QDFEGLLNNLQDWELSFKDKDKKL+ + GK K D Q NA+
Sbjct: 1 MSRVPSKHSRDQAQDFEGLLNNLQDWELSFKDKDKKLKSQSRGKEKADLLAQRHNVANAN 60
Query: 1657 RFSDSARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEKEL 1478
+ S S+RV + + K + D ++YDYL+ Y+A+ +LSS ++ES VDANSEKEL
Sbjct: 61 QLSSSSRVGERHAVEKNANEDIGDAAKKYDYLRNYDAMRQLSSSFMTEESSVDANSEKEL 120
Query: 1477 GNEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDDRY 1298
GNE+FK KKFNEAIDCYSRSIAL F+EAE+DCTEALNLDDRY
Sbjct: 121 GNEYFKHKKFNEAIDCYSRSIAL-------------------FEEAESDCTEALNLDDRY 161
Query: 1297 IKAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASGAL 1118
IKAYSRRSTARKELGKLKE++DDAEFALRLEPQNQEIKKQYA+ KSLL K+ILK+ S A
Sbjct: 162 IKAYSRRSTARKELGKLKEAYDDAEFALRLEPQNQEIKKQYAEAKSLLDKEILKKVSRAS 221
Query: 1117 AGSVEGA-RPGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSMEI 941
SV+G + GKS+V+ NK V ++ VS+ +G VAE+ +DH KGNN E+ +T+M +
Sbjct: 222 TSSVQGLQKAGKSKVETNKAVNGVKPVSSDFNSGMVAEVQDDHTKGNN-GEIPLKTAMRL 280
Query: 940 EINSMRSNGSDADSGSKTA---------KTIPKNSKQELRPSVQXXXXXXXXXXXXXXXK 788
+ SM+S + ++ ++A K N K EL+ SVQ K
Sbjct: 281 DGTSMKSKDQNGNASHESALQNTALETTKRSSTNGKHELKTSVQELAARAATLAKAEAAK 340
Query: 787 NIVPPKSAYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIATF 608
I PP SAYQFE+SWRGLSGD LQ +LLK T P +LP IFKNALSA +L+DI+ CIATF
Sbjct: 341 IIAPPNSAYQFEVSWRGLSGDRSLQAQLLKATPPTSLPQIFKNALSASLLMDILGCIATF 400
Query: 607 FMEDMALGVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLRS 428
F+ED+ L V++L+NLTKIPRFDMI+MCL SADKAD+F++W+EVFS+ T +YAEIL LRS
Sbjct: 401 FIEDVDLAVKFLENLTKIPRFDMIVMCLSSADKADLFRMWNEVFSQTTPEYAEILSRLRS 460
Query: 427 RY 422
RY
Sbjct: 461 RY 462
>ref|XP_009767331.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X5
[Nicotiana sylvestris]
Length = 449
Score = 509 bits (1311), Expect = e-173
Identities = 283/462 (61%), Positives = 335/462 (72%), Gaps = 6/462 (1%)
Frame = -3
Query: 1786 EGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPSRNNASRFSDSARVNGKQTMGKT 1607
+GLLNNLQDWELS KDKDKK++ A GK KL + ++ S +VNG Q +GK
Sbjct: 2 QGLLNNLQDWELSLKDKDKKMKSQARGKEKL----REDWSHTSELPTGPQVNGTQRVGK- 56
Query: 1606 PSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEKELGNEFFKQKKFNEAIDCY 1427
S+ + YDY K+Y S LSS + S+ES +DANSEKELGNEFFKQKKF EAIDCY
Sbjct: 57 -STLISGAAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKELGNEFFKQKKFKEAIDCY 115
Query: 1426 SRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKL 1247
SRSIALSPTAVAYANRAM+Y+K+KRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKL
Sbjct: 116 SRSIALSPTAVAYANRAMAYLKLKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKL 175
Query: 1246 KESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASGALAGSVEGAR-PGKSEVDK 1070
KES +DAEFA RLEPQNQEIKKQY + K+L +K+ILKR SGA S +GA+ GK+
Sbjct: 176 KESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSGATGVSAQGAQNTGKT---- 231
Query: 1069 NKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSMEIEINSMR--SNGSDADSG 896
NK P +QSV +S +V +I P + R+V T+ME+E M+ S GSDA +
Sbjct: 232 NKTGPVIQSVGSSQKVAEVRKI----PAKESSRDVPG-TAMEVEDTHMQINSKGSDASAT 286
Query: 895 SKT---AKTIPKNSKQELRPSVQXXXXXXXXXXXXXXXKNIVPPKSAYQFEMSWRGLSGD 725
T AK KNSKQEL+ SVQ KNI PP SAYQFE+SWRGLSGD
Sbjct: 287 VPTLNPAKRPHKNSKQELKESVQELAARAASLAKAEAAKNIAPPNSAYQFEVSWRGLSGD 346
Query: 724 HDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIATFFMEDMALGVEYLQNLTKIPRF 545
DLQT LLKVTSP+ LP IFKNALSAP+L+DI+RC+ATF +EDM L + YL+NLTK+PRF
Sbjct: 347 RDLQTHLLKVTSPSMLPQIFKNALSAPMLMDIVRCVATFSIEDMDLAIRYLENLTKVPRF 406
Query: 544 DMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLRSRYG 419
DMIIMCL S DKA++ KIWDEVF KG +++ LG LR +YG
Sbjct: 407 DMIIMCLSSTDKAELVKIWDEVFCKGAEEHSATLGALRLKYG 448
>ref|XP_009611911.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X3
[Nicotiana tomentosiformis]
Length = 455
Score = 508 bits (1307), Expect = e-172
Identities = 288/478 (60%), Positives = 336/478 (70%), Gaps = 6/478 (1%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPSRNNASR 1655
MA VPSKHSRD QDWELS KDKDKK++ A GK KL + ++ S
Sbjct: 1 MARVPSKHSRD----------QFQDWELSLKDKDKKMKSQARGKEKL----REDWSHTSE 46
Query: 1654 FSDSARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEKELG 1475
+V G Q +GK+ S +S YDY K+Y S LSS + S+ES +DANSEKELG
Sbjct: 47 LPTGPQVTGTQRVGKSTSI--SSAAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKELG 104
Query: 1474 NEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDDRYI 1295
NEFFKQKKF EAI CYSRSIALSPTAVAYANRAM+Y+KIKRFQEAENDCTEALNLDDRYI
Sbjct: 105 NEFFKQKKFKEAIICYSRSIALSPTAVAYANRAMAYLKIKRFQEAENDCTEALNLDDRYI 164
Query: 1294 KAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASGALA 1115
KAYSRRSTARKELGKLKES +DAEFA RLEPQNQEIKKQY + K+L +K+ILKR S A
Sbjct: 165 KAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSAATG 224
Query: 1114 GSVEGA-RPGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSMEIE 938
S +GA + GK+ NK P +QSVS SS KVAE+ + K NN R+V T+ME+E
Sbjct: 225 VSAQGAQKTGKT----NKTGPVIQSVSGSSQ--KVAEVRKIPAKENN-RDVPG-TAMEVE 276
Query: 937 INSMRSNGSDADSGS-----KTAKTIPKNSKQELRPSVQXXXXXXXXXXXXXXXKNIVPP 773
M+ N D+D+ + AK KNSKQEL+ SVQ KNI PP
Sbjct: 277 DTHMQINSKDSDASATVPTLNPAKRTHKNSKQELKESVQELAARAASLAKAEAAKNIAPP 336
Query: 772 KSAYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIATFFMEDM 593
SAYQFE+SWRGLSGD +LQT LLKVTSPA LP IFKNALSAP+L+DI+RC+ATF +EDM
Sbjct: 337 NSAYQFEVSWRGLSGDRNLQTHLLKVTSPATLPQIFKNALSAPMLMDIVRCVATFSIEDM 396
Query: 592 ALGVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLRSRYG 419
L + YL+NLTK+PRFDMIIMCL S DKA++ KIWDEVF KG ++ L LR YG
Sbjct: 397 DLAIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHTATLSALRLNYG 454
>ref|XP_009767326.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X4
[Nicotiana sylvestris]
Length = 454
Score = 506 bits (1302), Expect = e-172
Identities = 285/478 (59%), Positives = 337/478 (70%), Gaps = 6/478 (1%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPSRNNASR 1655
MA VP KH+RD QDWELS KDKDKK++ A GK KL + ++ S
Sbjct: 1 MARVPGKHTRD----------QFQDWELSLKDKDKKMKSQARGKEKL----REDWSHTSE 46
Query: 1654 FSDSARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEKELG 1475
+VNG Q +GK S+ + YDY K+Y S LSS + S+ES +DANSEKELG
Sbjct: 47 LPTGPQVNGTQRVGK--STLISGAAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKELG 104
Query: 1474 NEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDDRYI 1295
NEFFKQKKF EAIDCYSRSIALSPTAVAYANRAM+Y+K+KRFQEAENDCTEALNLDDRYI
Sbjct: 105 NEFFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLKRFQEAENDCTEALNLDDRYI 164
Query: 1294 KAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASGALA 1115
KAYSRRSTARKELGKLKES +DAEFA RLEPQNQEIKKQY + K+L +K+ILKR SGA
Sbjct: 165 KAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSGATG 224
Query: 1114 GSVEGAR-PGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSMEIE 938
S +GA+ GK+ NK P +QSV +S +V +I P + R+V T+ME+E
Sbjct: 225 VSAQGAQNTGKT----NKTGPVIQSVGSSQKVAEVRKI----PAKESSRDVPG-TAMEVE 275
Query: 937 INSMR--SNGSDADSGSKT---AKTIPKNSKQELRPSVQXXXXXXXXXXXXXXXKNIVPP 773
M+ S GSDA + T AK KNSKQEL+ SVQ KNI PP
Sbjct: 276 DTHMQINSKGSDASATVPTLNPAKRPHKNSKQELKESVQELAARAASLAKAEAAKNIAPP 335
Query: 772 KSAYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIATFFMEDM 593
SAYQFE+SWRGLSGD DLQT LLKVTSP+ LP IFKNALSAP+L+DI+RC+ATF +EDM
Sbjct: 336 NSAYQFEVSWRGLSGDRDLQTHLLKVTSPSMLPQIFKNALSAPMLMDIVRCVATFSIEDM 395
Query: 592 ALGVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLRSRYG 419
L + YL+NLTK+PRFDMIIMCL S DKA++ KIWDEVF KG +++ LG LR +YG
Sbjct: 396 DLAIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHSATLGALRLKYG 453
>ref|XP_015056193.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Solanum
pennellii]
Length = 470
Score = 502 bits (1293), Expect = e-170
Identities = 282/487 (57%), Positives = 342/487 (70%), Gaps = 12/487 (2%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPSRNNASR 1655
MA VPS HSRD QD +GLLNNLQDWELS K KDKK++ A GK L + + SR
Sbjct: 1 MARVPSNHSRDQFQDMQGLLNNLQDWELSLKGKDKKMKSQAGGKETL-------KEDWSR 53
Query: 1654 FSD---SARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEK 1484
S+ S + NG Q +GK+ S N + Y Y K Y +S LSS + S+ES ++ANSEK
Sbjct: 54 TSEPLTSPQANGTQQVGKSTSIRNAAG--PYSYSKTYNPISHLSSKLISEESNINANSEK 111
Query: 1483 ELGNEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDD 1304
ELGNE FKQKKFNEAIDCY+RSIALSPTAV+YANRAM+Y+KIKRFQEAENDCTEALNLDD
Sbjct: 112 ELGNECFKQKKFNEAIDCYARSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDD 171
Query: 1303 RYIKAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASG 1124
RYIKAYSRRST+RKELGKLKES +DAE ALRLEP+N EIKKQY + K+L +K+ILKR SG
Sbjct: 172 RYIKAYSRRSTSRKELGKLKESIEDAEVALRLEPRNPEIKKQYGEVKALYEKEILKRVSG 231
Query: 1123 ALAGSVEGARPGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSME 944
A S +G + + K P +QSVS+SS KVAE+ P NIR+V + +
Sbjct: 232 ATDVSAQGPQKSGKTI---KIGPVIQSVSSSSQ--KVAEV-RTIPAKENIRDVPG--TAK 283
Query: 943 IEINSMRSNGSDADSGSK---------TAKTIPKNSKQELRPSVQXXXXXXXXXXXXXXX 791
+E M+ N D+D+ T+K K SK+EL SVQ
Sbjct: 284 VEDTHMQINNKDSDASPTVPTLNLAFGTSKKTHKISKKELEESVQELAARAAGLAKTEAA 343
Query: 790 KNIVPPKSAYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIAT 611
KNI P SAYQFE+SWRGLSGD +LQT+LLKVTSPA LP IFKNALSAP+L+DI+RCIAT
Sbjct: 344 KNIAAPNSAYQFEVSWRGLSGDRNLQTQLLKVTSPAMLPRIFKNALSAPMLMDIVRCIAT 403
Query: 610 FFMEDMALGVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLR 431
FF+EDM L + YL++LTK+PRFDMIIMCL S DK+++ KIW+E+F KG +++ LG LR
Sbjct: 404 FFIEDMNLAIRYLEDLTKVPRFDMIIMCLSSTDKSELLKIWEEIFCKGAEEHSATLGALR 463
Query: 430 SRYGTKQ 410
YG KQ
Sbjct: 464 VSYGLKQ 470
>ref|XP_004248819.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Solanum
lycopersicum]
Length = 470
Score = 498 bits (1282), Expect = e-168
Identities = 282/487 (57%), Positives = 341/487 (70%), Gaps = 12/487 (2%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPSRNNASR 1655
MA VPS HSRD QD +GL NNLQDWEL+ K KDKK++ A GK L + + SR
Sbjct: 1 MARVPSNHSRDQFQDMQGLFNNLQDWELALKGKDKKMKSQAGGKETL-------KEDWSR 53
Query: 1654 FSD---SARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEK 1484
S+ S + NG Q +GK+ S N + Y Y K Y +S LSS + S+ES ++ANSEK
Sbjct: 54 TSEPLTSPQANGTQQVGKSTSIRNAAG--PYSYSKNYNPISHLSSELISEESNINANSEK 111
Query: 1483 ELGNEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDD 1304
ELGNE FKQKKFNEAIDCYSRSIALSPTAV+YANRAM+Y+KIKRFQEAENDCTEALNLDD
Sbjct: 112 ELGNECFKQKKFNEAIDCYSRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDD 171
Query: 1303 RYIKAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASG 1124
RYIKAYSRRST+RKELGKLKES +DAEFAL LEP+N EIKKQY + K+L +K+ILKR SG
Sbjct: 172 RYIKAYSRRSTSRKELGKLKESIEDAEFALWLEPRNPEIKKQYGEVKALYEKEILKRVSG 231
Query: 1123 ALAGSVEGARPGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSME 944
A S +G + + K P +QSVS+SS KVAE+ K NN R+V + +
Sbjct: 232 ATDVSAQGPQKSGKTI---KIGPVIQSVSSSSQ--KVAEVRTIPAKENN-RDVLG--TAK 283
Query: 943 IEINSMRSNGSDADSGSK---------TAKTIPKNSKQELRPSVQXXXXXXXXXXXXXXX 791
+E M+ + D+D+ TAK K SKQEL SVQ
Sbjct: 284 VEDTHMQISNKDSDASPTVPTLNLAFGTAKKTHKISKQELEESVQELAARAAGLAKTEAA 343
Query: 790 KNIVPPKSAYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIAT 611
KNI P SAYQFE+SWRGLSGD +LQT+LLKVTSPA LP IFKNALSAP+L+DI+RCIAT
Sbjct: 344 KNIAAPNSAYQFEVSWRGLSGDRNLQTQLLKVTSPAMLPRIFKNALSAPMLMDIVRCIAT 403
Query: 610 FFMEDMALGVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLR 431
FF+EDM L + YL++LTK+PRFDMIIMCL SADK+++ KIW+E+F K +++ LG LR
Sbjct: 404 FFIEDMNLAIRYLEDLTKVPRFDMIIMCLSSADKSELLKIWEEIFCKVAEEHSATLGALR 463
Query: 430 SRYGTKQ 410
YG KQ
Sbjct: 464 VSYGLKQ 470
>ref|XP_006339932.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Solanum
tuberosum]
Length = 468
Score = 497 bits (1280), Expect = e-168
Identities = 284/486 (58%), Positives = 342/486 (70%), Gaps = 12/486 (2%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPSRNNASR 1655
MA VPSKHSRD QD +GLLNNLQDWELS K KDKK++ A GK L R + SR
Sbjct: 1 MAKVPSKHSRDQFQDMQGLLNNLQDWELSLKGKDKKMKSQAHGKETL-------REDWSR 53
Query: 1654 FSD---SARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEK 1484
S+ S +VNG + +GK+ S S Y+Y K Y +S LSS + S+ES ++ANSEK
Sbjct: 54 TSELLTSPQVNGTR-VGKSTSI--RSAAGPYNYSKNYNPISHLSSELISEESNINANSEK 110
Query: 1483 ELGNEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDD 1304
ELGNE FKQKKFNEAIDCYSRSIALSPTAV+YANRAM+Y+KIKRFQEAENDCTEALNLDD
Sbjct: 111 ELGNECFKQKKFNEAIDCYSRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDD 170
Query: 1303 RYIKAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASG 1124
RYIKAYSRRST+RKELGKLKES +DAEFALRLEPQN EIKKQY + K+L +K+I KR SG
Sbjct: 171 RYIKAYSRRSTSRKELGKLKESIEDAEFALRLEPQNPEIKKQYGEVKALYEKEIRKRVSG 230
Query: 1123 ALAGSVEGARPGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSME 944
A S + A+ + K P +QSVS+SS K+AE+ K NN R+V + +
Sbjct: 231 ATDVSAQRAQKSGKTI---KSGPVIQSVSSSSQ--KMAEVWTIPAKENN-RDVPG--TAK 282
Query: 943 IEINSMRSNGSDADSGSK---------TAKTIPKNSKQELRPSVQXXXXXXXXXXXXXXX 791
+E M+ N D+D+ TAK K SKQEL SVQ
Sbjct: 283 VEDTHMQINNKDSDASPTVPTLNPAFGTAKKTHKISKQELEESVQELAARAAGLAKTEAA 342
Query: 790 KNIVPPKSAYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIAT 611
KNI P SAYQFE+SWRGLSGD +LQT+LLKVTSPA LP IFKNALSAP+L+DI+RC+AT
Sbjct: 343 KNIAAPNSAYQFEVSWRGLSGDRNLQTQLLKVTSPAMLPRIFKNALSAPMLMDIVRCVAT 402
Query: 610 FFMEDMALGVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLR 431
FF+EDM L + YL++LTK+PRFDMIIMCL S DK+++ KIW+E+F K +++ LG LR
Sbjct: 403 FFIEDMNLAIRYLEDLTKVPRFDMIIMCLSSTDKSELLKIWEEIFCKEAEEHSATLGALR 462
Query: 430 SRYGTK 413
YG K
Sbjct: 463 VPYGLK 468
>ref|XP_015056194.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Solanum
pennellii]
Length = 469
Score = 497 bits (1279), Expect = e-168
Identities = 282/487 (57%), Positives = 341/487 (70%), Gaps = 12/487 (2%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPSRNNASR 1655
MA VPS HSRD QD +GLLNNLQDWELS K KDKK++ A GK L + + SR
Sbjct: 1 MARVPSNHSRDQFQDMQGLLNNLQDWELSLKGKDKKMKSQAGGKETL-------KEDWSR 53
Query: 1654 FSD---SARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEK 1484
S+ S + NG Q +GK+ S N + Y Y K Y +S LSS + S+ES ++ANSEK
Sbjct: 54 TSEPLTSPQANGTQQVGKSTSIRNAAG--PYSYSKTYNPISHLSSKLISEESNINANSEK 111
Query: 1483 ELGNEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDD 1304
ELGNE FKQKKFNEAIDCY+RSIALSPTAV+YANRAM+Y+KIKRFQEAENDCTEALNLDD
Sbjct: 112 ELGNECFKQKKFNEAIDCYARSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDD 171
Query: 1303 RYIKAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASG 1124
RYIKAYSRRST+RKELGKLKES +DAE ALRLEP+N EIKKQY + K+L +K ILKR SG
Sbjct: 172 RYIKAYSRRSTSRKELGKLKESIEDAEVALRLEPRNPEIKKQYGEVKALYEK-ILKRVSG 230
Query: 1123 ALAGSVEGARPGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSME 944
A S +G + + K P +QSVS+SS KVAE+ P NIR+V + +
Sbjct: 231 ATDVSAQGPQKSGKTI---KIGPVIQSVSSSSQ--KVAEV-RTIPAKENIRDVPG--TAK 282
Query: 943 IEINSMRSNGSDADSGSK---------TAKTIPKNSKQELRPSVQXXXXXXXXXXXXXXX 791
+E M+ N D+D+ T+K K SK+EL SVQ
Sbjct: 283 VEDTHMQINNKDSDASPTVPTLNLAFGTSKKTHKISKKELEESVQELAARAAGLAKTEAA 342
Query: 790 KNIVPPKSAYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIAT 611
KNI P SAYQFE+SWRGLSGD +LQT+LLKVTSPA LP IFKNALSAP+L+DI+RCIAT
Sbjct: 343 KNIAAPNSAYQFEVSWRGLSGDRNLQTQLLKVTSPAMLPRIFKNALSAPMLMDIVRCIAT 402
Query: 610 FFMEDMALGVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLR 431
FF+EDM L + YL++LTK+PRFDMIIMCL S DK+++ KIW+E+F KG +++ LG LR
Sbjct: 403 FFIEDMNLAIRYLEDLTKVPRFDMIIMCLSSTDKSELLKIWEEIFCKGAEEHSATLGALR 462
Query: 430 SRYGTKQ 410
YG KQ
Sbjct: 463 VSYGLKQ 469
>ref|XP_010327507.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Solanum
lycopersicum]
Length = 469
Score = 493 bits (1268), Expect = e-166
Identities = 282/487 (57%), Positives = 340/487 (69%), Gaps = 12/487 (2%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPSRNNASR 1655
MA VPS HSRD QD +GL NNLQDWEL+ K KDKK++ A GK L + + SR
Sbjct: 1 MARVPSNHSRDQFQDMQGLFNNLQDWELALKGKDKKMKSQAGGKETL-------KEDWSR 53
Query: 1654 FSD---SARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEK 1484
S+ S + NG Q +GK+ S N + Y Y K Y +S LSS + S+ES ++ANSEK
Sbjct: 54 TSEPLTSPQANGTQQVGKSTSIRNAAG--PYSYSKNYNPISHLSSELISEESNINANSEK 111
Query: 1483 ELGNEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDD 1304
ELGNE FKQKKFNEAIDCYSRSIALSPTAV+YANRAM+Y+KIKRFQEAENDCTEALNLDD
Sbjct: 112 ELGNECFKQKKFNEAIDCYSRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDD 171
Query: 1303 RYIKAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASG 1124
RYIKAYSRRST+RKELGKLKES +DAEFAL LEP+N EIKKQY + K+L +K ILKR SG
Sbjct: 172 RYIKAYSRRSTSRKELGKLKESIEDAEFALWLEPRNPEIKKQYGEVKALYEK-ILKRVSG 230
Query: 1123 ALAGSVEGARPGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSME 944
A S +G + + K P +QSVS+SS KVAE+ K NN R+V + +
Sbjct: 231 ATDVSAQGPQKSGKTI---KIGPVIQSVSSSSQ--KVAEVRTIPAKENN-RDVLG--TAK 282
Query: 943 IEINSMRSNGSDADSGSK---------TAKTIPKNSKQELRPSVQXXXXXXXXXXXXXXX 791
+E M+ + D+D+ TAK K SKQEL SVQ
Sbjct: 283 VEDTHMQISNKDSDASPTVPTLNLAFGTAKKTHKISKQELEESVQELAARAAGLAKTEAA 342
Query: 790 KNIVPPKSAYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIAT 611
KNI P SAYQFE+SWRGLSGD +LQT+LLKVTSPA LP IFKNALSAP+L+DI+RCIAT
Sbjct: 343 KNIAAPNSAYQFEVSWRGLSGDRNLQTQLLKVTSPAMLPRIFKNALSAPMLMDIVRCIAT 402
Query: 610 FFMEDMALGVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLR 431
FF+EDM L + YL++LTK+PRFDMIIMCL SADK+++ KIW+E+F K +++ LG LR
Sbjct: 403 FFIEDMNLAIRYLEDLTKVPRFDMIIMCLSSADKSELLKIWEEIFCKVAEEHSATLGALR 462
Query: 430 SRYGTKQ 410
YG KQ
Sbjct: 463 VSYGLKQ 469
>ref|XP_006339933.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Solanum
tuberosum]
Length = 467
Score = 492 bits (1266), Expect = e-166
Identities = 284/486 (58%), Positives = 341/486 (70%), Gaps = 12/486 (2%)
Frame = -3
Query: 1834 MATVPSKHSRDPPQDFEGLLNNLQDWELSFKDKDKKLRLDAEGKGKLDRPGQPSRNNASR 1655
MA VPSKHSRD QD +GLLNNLQDWELS K KDKK++ A GK L R + SR
Sbjct: 1 MAKVPSKHSRDQFQDMQGLLNNLQDWELSLKGKDKKMKSQAHGKETL-------REDWSR 53
Query: 1654 FSD---SARVNGKQTMGKTPSSDNTSTVRQYDYLKEYEALSRLSSGVPSQESVVDANSEK 1484
S+ S +VNG + +GK+ S S Y+Y K Y +S LSS + S+ES ++ANSEK
Sbjct: 54 TSELLTSPQVNGTR-VGKSTSI--RSAAGPYNYSKNYNPISHLSSELISEESNINANSEK 110
Query: 1483 ELGNEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMSYIKIKRFQEAENDCTEALNLDD 1304
ELGNE FKQKKFNEAIDCYSRSIALSPTAV+YANRAM+Y+KIKRFQEAENDCTEALNLDD
Sbjct: 111 ELGNECFKQKKFNEAIDCYSRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDD 170
Query: 1303 RYIKAYSRRSTARKELGKLKESFDDAEFALRLEPQNQEIKKQYADCKSLLQKDILKRASG 1124
RYIKAYSRRST+RKELGKLKES +DAEFALRLEPQN EIKKQY + K+L +K I KR SG
Sbjct: 171 RYIKAYSRRSTSRKELGKLKESIEDAEFALRLEPQNPEIKKQYGEVKALYEK-IRKRVSG 229
Query: 1123 ALAGSVEGARPGKSEVDKNKFVPKLQSVSTSSPAGKVAEILEDHPKGNNIREVAAETSME 944
A S + A+ + K P +QSVS+SS K+AE+ K NN R+V + +
Sbjct: 230 ATDVSAQRAQKSGKTI---KSGPVIQSVSSSSQ--KMAEVWTIPAKENN-RDVPG--TAK 281
Query: 943 IEINSMRSNGSDADSGSK---------TAKTIPKNSKQELRPSVQXXXXXXXXXXXXXXX 791
+E M+ N D+D+ TAK K SKQEL SVQ
Sbjct: 282 VEDTHMQINNKDSDASPTVPTLNPAFGTAKKTHKISKQELEESVQELAARAAGLAKTEAA 341
Query: 790 KNIVPPKSAYQFEMSWRGLSGDHDLQTRLLKVTSPAALPGIFKNALSAPILVDIIRCIAT 611
KNI P SAYQFE+SWRGLSGD +LQT+LLKVTSPA LP IFKNALSAP+L+DI+RC+AT
Sbjct: 342 KNIAAPNSAYQFEVSWRGLSGDRNLQTQLLKVTSPAMLPRIFKNALSAPMLMDIVRCVAT 401
Query: 610 FFMEDMALGVEYLQNLTKIPRFDMIIMCLPSADKADIFKIWDEVFSKGTTDYAEILGNLR 431
FF+EDM L + YL++LTK+PRFDMIIMCL S DK+++ KIW+E+F K +++ LG LR
Sbjct: 402 FFIEDMNLAIRYLEDLTKVPRFDMIIMCLSSTDKSELLKIWEEIFCKEAEEHSATLGALR 461
Query: 430 SRYGTK 413
YG K
Sbjct: 462 VPYGLK 467