BLASTX nr result

ID: Rehmannia27_contig00014035 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00014035
         (737 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011075556.1| PREDICTED: ERAD-associated E3 ubiquitin-prot...    77   8e-13
ref|XP_011075555.1| PREDICTED: ERAD-associated E3 ubiquitin-prot...    77   8e-13
ref|XP_011070965.1| PREDICTED: ERAD-associated E3 ubiquitin-prot...    72   7e-11

>ref|XP_011075556.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
           isoform X2 [Sesamum indicum]
          Length = 531

 Score = 77.4 bits (189), Expect = 8e-13
 Identities = 47/97 (48%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
 Frame = +3

Query: 3   TFGHPGNTVMTNSGGDGAASGMSQHYP--NMTFAQLPQCTFVPSQ----NGHLGAGSASD 164
           TFGHP +T M N+GG GAASG+SQ Y   N+TFAQLPQC  +PSQ    NG     SASD
Sbjct: 415 TFGHPASTSMANTGG-GAASGLSQQYEFANVTFAQLPQCAPLPSQFPCLNGQFDPESASD 473

Query: 165 SQKDLQVKXXXXXXXXXXXXXXXXXTSNSEKKMDIST 275
           SQ  LQ K                 T N EK MD+ +
Sbjct: 474 SQLGLQTKLIKNQIEFLQNQYQLLQTQNGEKTMDLGS 510


>ref|XP_011075555.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
           isoform X1 [Sesamum indicum]
          Length = 539

 Score = 77.4 bits (189), Expect = 8e-13
 Identities = 47/97 (48%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
 Frame = +3

Query: 3   TFGHPGNTVMTNSGGDGAASGMSQHYP--NMTFAQLPQCTFVPSQ----NGHLGAGSASD 164
           TFGHP +T M N+GG GAASG+SQ Y   N+TFAQLPQC  +PSQ    NG     SASD
Sbjct: 423 TFGHPASTSMANTGG-GAASGLSQQYEFANVTFAQLPQCAPLPSQFPCLNGQFDPESASD 481

Query: 165 SQKDLQVKXXXXXXXXXXXXXXXXXTSNSEKKMDIST 275
           SQ  LQ K                 T N EK MD+ +
Sbjct: 482 SQLGLQTKLIKNQIEFLQNQYQLLQTQNGEKTMDLGS 518


>ref|XP_011070965.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
           [Sesamum indicum]
          Length = 537

 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 48/125 (38%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
 Frame = +3

Query: 3   TFGHPGNTVMTNSGGDGAASGMSQHY--PNMTFAQLPQCTFVPSQ----NGHLGAGSASD 164
           TFGH GN V+ + G DGA SG+SQ +   NM F QLPQ +FVP Q    NGH  +G+A  
Sbjct: 415 TFGHCGNNVVASDGEDGAVSGLSQEHQLANMVFPQLPQGSFVPPQFQGFNGHFASGNA-- 472

Query: 165 SQKDLQVKXXXXXXXXXXXXXXXXXTSNSEKKMDISTXXXXXXXXXXXXXXXXXXXETGN 344
           S+ DLQVK                 TS+S K  D+ T                   ETGN
Sbjct: 473 SEHDLQVKLIEHQIEFLQRQLELLQTSSSGKGKDLGTSDIKGKTISSPSSSTVDSSETGN 532

Query: 345 PEPTN 359
              T+
Sbjct: 533 AAATD 537


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