BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00013945
         (4504 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012845534.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...  1517   0.0  
ref|XP_011078257.1| PREDICTED: probable RNA-dependent RNA polyme...  1449   0.0  
ref|XP_011093632.1| PREDICTED: probable RNA-dependent RNA polyme...  1274   0.0  
gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Erythra...  1237   0.0  
gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]  1057   0.0  
emb|CDP03267.1| unnamed protein product [Coffea canephora]           1014   0.0  
ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polyme...   994   0.0  
ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polyme...   989   0.0  
ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polyme...   988   0.0  
ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polyme...   980   0.0  
ref|XP_010322170.1| PREDICTED: probable RNA-dependent RNA polyme...   959   0.0  
ref|XP_015077971.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...   958   0.0  
ref|XP_009760370.1| PREDICTED: probable RNA-dependent RNA polyme...   956   0.0  
ref|XP_009760371.1| PREDICTED: probable RNA-dependent RNA polyme...   952   0.0  
ref|XP_009603361.1| PREDICTED: probable RNA-dependent RNA polyme...   950   0.0  
ref|XP_009603362.1| PREDICTED: probable RNA-dependent RNA polyme...   949   0.0  
ref|XP_015059191.1| PREDICTED: probable RNA-dependent RNA polyme...   934   0.0  
emb|CDP03268.1| unnamed protein product [Coffea canephora]            922   0.0  
ref|XP_010313737.1| PREDICTED: probable RNA-dependent RNA polyme...   928   0.0  
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme...   927   0.0  

>ref|XP_012845534.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            5 [Erythranthe guttata]
          Length = 1040

 Score = 1517 bits (3928), Expect = 0.0
 Identities = 760/1052 (72%), Positives = 874/1052 (83%), Gaps = 2/1052 (0%)
 Frame = +1

Query: 1030 ASPH-QEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPI 1206
            +SP+ Q++RLP+ VE TIQ IC+EK QP +KNYAR+MLAEIGEQAS+EVLT IL SN PI
Sbjct: 5    SSPYNQDIRLPKKVEMTIQTICLEKNQPPLKNYARKMLAEIGEQASMEVLTEILSSNQPI 64

Query: 1207 RSFSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQS 1386
            +SFSGFV+ +VKK+YP+ AA VLA Y+S  +SPQ+Q++WSPSSTSP    HT NGENL+S
Sbjct: 65   KSFSGFVSFMVKKDYPVQAAAVLAAYDS--SSPQSQKMWSPSSTSP----HTRNGENLES 118

Query: 1387 PLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRE 1566
            PL    + S +SNL  T PQ++ C+LSFEDET        QE +SP+     P   E +E
Sbjct: 119  PLSRLSMNSITSNLHSTSPQSVGCRLSFEDET--------QENRSPNCGTSQPSVPEVKE 170

Query: 1567 TTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAK 1746
               P+TI+QQL+ LNKLEYRKLFLVLSYIGR+KLE VVT++ ADEIYRMN+ PM+ FE K
Sbjct: 171  ---PITITQQLITLNKLEYRKLFLVLSYIGREKLEDVVTVEDADEIYRMNEFPMQAFENK 227

Query: 1747 IWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDD 1926
            IW  YGQ+F DE DRSQ+LDWDSGKTH+YYCHV +DG YYFKGPYLNS +THLQRSLGDD
Sbjct: 228  IWKKYGQRFYDESDRSQYLDWDSGKTHVYYCHVYQDGRYYFKGPYLNSMKTHLQRSLGDD 287

Query: 1927 NILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEK-TYSAVKC 2103
            NILIVKF EDGA+ T NI +EGILVGLRRY              NQ DKE+K TYS V+C
Sbjct: 288  NILIVKFLEDGAFGTGNIAQEGILVGLRRYRFFVFKDDRKKVNKNQSDKEKKATYSNVRC 347

Query: 2104 YFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVD 2283
            +FV +DSVSP G DENYIL  KTI EAR +FMHI+T+S+IEK +AR SLILSK+IKLE++
Sbjct: 348  FFVRVDSVSPSGYDENYILSRKTIGEARRMFMHIHTISSIEKCMARLSLILSKSIKLEIN 407

Query: 2284 LAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDN 2463
            LAAVIIE IKDIP +DE G +IHDEDGKPILHTDGTGYISEDLA++C   FSA KY TD+
Sbjct: 408  LAAVIIEKIKDIPFQDEGGFVIHDEDGKPILHTDGTGYISEDLAIRCQICFSAPKYGTDD 467

Query: 2464 SFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQI 2643
             FEK+D F DF ++A Q R  E+RNKE PLL+QCR+FH+GYAVKGTLLVN+KLEPGTIQI
Sbjct: 468  RFEKNDHFADFADIASQVREAESRNKEAPLLVQCRIFHEGYAVKGTLLVNRKLEPGTIQI 527

Query: 2644 RPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMN 2823
            RPSMIKV +D    ++E FNSLEIVNISH+PGRNC SKYLIALL+YGGVPQEFFLNL+ N
Sbjct: 528  RPSMIKVERDHNIKVEEAFNSLEIVNISHKPGRNCLSKYLIALLSYGGVPQEFFLNLVAN 587

Query: 2824 ALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTK 3003
             L D RNVY+NRRAALRVASNH GLD+GF+AQRMI SGVPL+EPYLQLCLSNLE+GEKTK
Sbjct: 588  TLEDARNVYTNRRAALRVASNHAGLDYGFLAQRMICSGVPLDEPYLQLCLSNLENGEKTK 647

Query: 3004 LKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEA 3183
            LK GKIP++ESFYLMGTADPTGVLN DEVCVIL NGQISGKVLVYRNPGMHFGDVH+MEA
Sbjct: 648  LKTGKIPLNESFYLMGTADPTGVLNNDEVCVILGNGQISGKVLVYRNPGMHFGDVHVMEA 707

Query: 3184 VYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWT 3363
            VYVKE+EE VGNAKYG+FFSTKG+ SAAYEMATGDFDGDMYWVSRNPELLKYFKA KPW 
Sbjct: 708  VYVKELEEFVGNAKYGVFFSTKGATSAAYEMATGDFDGDMYWVSRNPELLKYFKASKPWK 767

Query: 3364 RSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHC 3543
            R  S P S+KKNP+EFSD             AR+PSF+MATAADSWLT+MDRLL LGD  
Sbjct: 768  RVLSAPDSKKKNPKEFSDXELENELFQLCLEARTPSFNMATAADSWLTFMDRLLTLGDDR 827

Query: 3544 ATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSYRSISVL 3723
              EKKSL  KMI+LVDIYYDALDAPK+G KV VP ELR + +PHHME+G + SY S SVL
Sbjct: 828  TAEKKSLMKKMIRLVDIYYDALDAPKSGKKVKVPEELRAEMYPHHMEKGSELSYHSSSVL 887

Query: 3724 GQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDESK 3903
            GQIYD V A K++ VP+KEIWK+ CFDVPIPEIYV+MWK+RY++YR+EM KAL SG+ES+
Sbjct: 888  GQIYDRVDALKNDFVPRKEIWKLPCFDVPIPEIYVKMWKSRYESYRREMTKALKSGNESR 947

Query: 3904 NDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMGHGVEKCGFAWRV 4083
            NDAA+EVIKKYKQLLYEA DMEES K SEVIYDEAIAIYHVTYDYAM HGVEKC FAWR+
Sbjct: 948  NDAADEVIKKYKQLLYEAGDMEESAKSSEVIYDEAIAIYHVTYDYAMEHGVEKCNFAWRI 1007

Query: 4084 AGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 4179
            A SALC+LCAWKLAGP+EKP+ ILPS+LR+LL
Sbjct: 1008 AASALCNLCAWKLAGPREKPLPILPSLLRELL 1039


>ref|XP_011078257.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Sesamum indicum]
          Length = 1036

 Score = 1449 bits (3752), Expect = 0.0
 Identities = 743/1052 (70%), Positives = 848/1052 (80%), Gaps = 2/1052 (0%)
 Frame = +1

Query: 1030 ASPHQEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR 1209
            +SP QEVRLP+ VE  IQRIC+EK QP +K YAR MLAEIGEQA+LEVLTT+L S T IR
Sbjct: 4    SSPDQEVRLPEPVEMIIQRICLEKNQPPLKKYARNMLAEIGEQAALEVLTTVLSSKT-IR 62

Query: 1210 SFSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQSP 1389
            SF G+VA LVKK++P  AA VL+ Y SP             STSP  SPHT   E L+SP
Sbjct: 63   SFGGYVAFLVKKDFPNQAAAVLSAYGSPHQC----------STSPNKSPHTPYYERLRSP 112

Query: 1390 LLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRET 1569
            + SF V+S  SNL++TGPQNI C LSFE+ET         EK  P  R QSPL  E RE 
Sbjct: 113  VSSFSVDSIPSNLNKTGPQNIRCNLSFENET--------LEKSCPGARCQSPLPDELREM 164

Query: 1570 TEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKI 1749
            T+ +TISQQLMIL++L++RKLFLVLSYIGRQKLEAVV LDGA+EIY M DLPM  FEAKI
Sbjct: 165  TDSVTISQQLMILSQLQFRKLFLVLSYIGRQKLEAVVNLDGANEIYSMKDLPMNDFEAKI 224

Query: 1750 WNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDN 1929
            WNSYG+KFC+E DRSQ+LDWDS KTH YYCHVC+DGSYYFKGPYLNS RTHLQRSLGDD+
Sbjct: 225  WNSYGKKFCEESDRSQYLDWDSQKTHHYYCHVCRDGSYYFKGPYLNSFRTHLQRSLGDDS 284

Query: 1930 ILIVKFSEDGAYAT-DNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEKTYSAVKCY 2106
            ILIVKF ED +     ++VEEGILVGLRRY               QM +++ TYSAVK Y
Sbjct: 285  ILIVKFLEDDSNTMGSSVVEEGILVGLRRYRFFVFKDERKKVKKIQMVEKKSTYSAVKGY 344

Query: 2107 FVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDL 2286
            +V +DSV P+G +E YIL  KTISEAR LFMHI+T+STIEKY+ARFSLILSKT KL++D 
Sbjct: 345  YVRVDSVCPHGYEEGYILSRKTISEARRLFMHIHTVSTIEKYMARFSLILSKTRKLDIDF 404

Query: 2287 AAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNS 2466
             AV I+ I+DIP +DE+ SIIHDEDGKPILHTDGTGYIS DLAMKCP+ FS A  ITDNS
Sbjct: 405  KAVTIQRIEDIPFRDENDSIIHDEDGKPILHTDGTGYISVDLAMKCPRSFSLANDITDNS 464

Query: 2467 FEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIR 2646
            FEK+++ V+ E+ A QKRG EARNKEPPLL+QCRLF+DG AVKGTLL+N+KLEPGTIQIR
Sbjct: 465  FEKYEEIVNIEDTACQKRGAEARNKEPPLLIQCRLFYDGCAVKGTLLINRKLEPGTIQIR 524

Query: 2647 PSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNA 2826
            PSMIKV +D+  P+ ETF SLEIV  S RPGRN  SKYLIALL+YGGVPQEFF NLL NA
Sbjct: 525  PSMIKVERDQKLPLGETFKSLEIVATSRRPGRNALSKYLIALLSYGGVPQEFFCNLLTNA 584

Query: 2827 LVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKL 3006
            L +TRNVYS+ RAALRVASN+DGL+ G VA+RMISSG+PL+EPYLQ CLS+LESGEK KL
Sbjct: 585  LEETRNVYSDTRAALRVASNYDGLEVGVVARRMISSGIPLSEPYLQHCLSSLESGEKIKL 644

Query: 3007 KQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAV 3186
            KQGKIPVSESFYLMGTADPTGVL   EVCVILDNGQISGKVLVYRNPGMHFGDVH+MEAV
Sbjct: 645  KQGKIPVSESFYLMGTADPTGVLKNHEVCVILDNGQISGKVLVYRNPGMHFGDVHVMEAV 704

Query: 3187 YVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTR 3366
            Y +E+EEVVGNAKYGIFFSTKG RSAAYEMATGDFDGDMYWVSRNPELLKYFKA +PW R
Sbjct: 705  YKEELEEVVGNAKYGIFFSTKGKRSAAYEMATGDFDGDMYWVSRNPELLKYFKASEPWKR 764

Query: 3367 SNSVPQSEK-KNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHC 3543
              S P   K +NP+EFSD             AR PSFSMATAADSWLT+MDRLL LGD C
Sbjct: 765  FYSTPADSKIRNPREFSDMELEHELFQLFQEAREPSFSMATAADSWLTFMDRLLTLGDDC 824

Query: 3544 ATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSYRSISVL 3723
            A+EK SLK K+IQL+DIYYDALDAPK+G KV VP ELR + +PHHMERG + SY S S+L
Sbjct: 825  ASEKLSLKKKIIQLIDIYYDALDAPKSGKKVKVPNELRAEMYPHHMERGAEFSYNSSSIL 884

Query: 3724 GQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDESK 3903
            G+IYD VQAFK++AVP KEIWK+   D PIPE+Y++ WKARY +YR+EM  A+ S DESK
Sbjct: 885  GRIYDKVQAFKNDAVPGKEIWKLPFLDDPIPELYLK-WKARYKDYREEMTSAMKSSDESK 943

Query: 3904 NDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMGHGVEKCGFAWRV 4083
            + AA +VI KYKQLLYEAP MEES K++E IY+E++AIYHV YDYAM HGV +C FAW+V
Sbjct: 944  DLAARDVIHKYKQLLYEAPCMEESAKNTEEIYEESVAIYHVVYDYAMRHGVTRCSFAWKV 1003

Query: 4084 AGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 4179
            AGSALC LCAWKLAGPKE+PI ILPSVLR+LL
Sbjct: 1004 AGSALCDLCAWKLAGPKEEPIAILPSVLRELL 1035


>ref|XP_011093632.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Sesamum indicum]
          Length = 1013

 Score = 1275 bits (3298), Expect = 0.0
 Identities = 647/1055 (61%), Positives = 793/1055 (75%), Gaps = 2/1055 (0%)
 Frame = +1

Query: 1024 MGASPHQEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTP 1203
            M  SPHQE  LP S+E TIQ+IC ++ QP I +YAR++LA+IGE+A+ ++L  I  SN  
Sbjct: 1    MDGSPHQEAPLPHSIEKTIQKICKDQSQPPISSYARKLLADIGEKAASDLLARI--SNQR 58

Query: 1204 I-RSFSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENL 1380
            I +SFSG++  LVKK +P V             S  ++R  SPSS+SP       N    
Sbjct: 59   ITKSFSGYIITLVKKYHPAVVP-----------SSPSKRSLSPSSSSPR------NTSLK 101

Query: 1381 QSPLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGER 1560
            +SPL                   I   LSFED+  E R  + + + S +V  ++    E 
Sbjct: 102  KSPL------------------QIGRLLSFEDDVQETRGPIFEHQTSTAVELKN---SEL 140

Query: 1561 RETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFE 1740
            R  T+  TISQQL IL+KLEYRKLFLVLSY GR KLE V+T+DGA++I++  DLPM +FE
Sbjct: 141  RGMTKSNTISQQLRILSKLEYRKLFLVLSYTGRHKLENVMTVDGANDIFQKKDLPMSIFE 200

Query: 1741 AKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLG 1920
              IWN+YG K+C++ DRS++LDWD GKTHLYYC+V +DGSY+FKGP L+S+RTHLQRSLG
Sbjct: 201  TAIWNTYGNKYCNKSDRSEYLDWDFGKTHLYYCYVHEDGSYHFKGPCLSSTRTHLQRSLG 260

Query: 1921 DDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEKTYSAVK 2100
            DDNILIVKF ED  Y   NIVEEGILVGLRR+              NQ++ E+    AVK
Sbjct: 261  DDNILIVKFLEDDMYGV-NIVEEGILVGLRRFRFLVFKDERKGRKKNQIENEKAYSCAVK 319

Query: 2101 CYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEV 2280
            C FV IDSV P   D NYIL GK++ E R LFMH++T+ T+EKY+ARFSLILSKTIKL+V
Sbjct: 320  CLFVRIDSVDPVE-DNNYILSGKSVGEVRRLFMHVHTVLTMEKYMARFSLILSKTIKLQV 378

Query: 2281 DLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITD 2460
            D  A+ +E I+DIP +D+ GS+I DEDGKP+LHTDGTGYISEDLAMKCPK+FSAAKYITD
Sbjct: 379  DFGAITVETIQDIPFRDDSGSLICDEDGKPLLHTDGTGYISEDLAMKCPKEFSAAKYITD 438

Query: 2461 NSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQ 2640
            NSFE + +FVD ++ + Q R  ++RNKE PLLMQCRLF++G AVKGTLLVNKKL+ G IQ
Sbjct: 439  NSFETYHEFVDIDDASCQTRLAKSRNKEAPLLMQCRLFYNGCAVKGTLLVNKKLKLGEIQ 498

Query: 2641 IRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLM 2820
            IRPSMIKV +D T+P++  FNSLEIV ISH+PGR   SK LI+LLNYGGVPQ+ FL LL 
Sbjct: 499  IRPSMIKVERDCTAPVQGNFNSLEIVAISHKPGRTFLSKTLISLLNYGGVPQQVFLELLT 558

Query: 2821 NALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKT 3000
            NAL DT+ VYSNR AALRVASNHDGLDFG++AQ MIS G+PLNEPYL  CL NL+  E+ 
Sbjct: 559  NALEDTQKVYSNRHAALRVASNHDGLDFGYLAQLMISCGIPLNEPYLNHCLCNLKKDERA 618

Query: 3001 KLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIME 3180
            KL++GK+PV ESFYLMGTADPTGVL  D+VCV+LDNGQISGKVLVYRNPG+HFGD+H+ME
Sbjct: 619  KLRKGKVPVGESFYLMGTADPTGVLEYDQVCVVLDNGQISGKVLVYRNPGLHFGDIHVME 678

Query: 3181 AVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPW 3360
            A+YV+++E+ +G++KYGIFFSTKG RSA YEMATGDFDGDMYWVSR+ ELLK FKA +PW
Sbjct: 679  AIYVQQLEDYIGDSKYGIFFSTKGGRSAPYEMATGDFDGDMYWVSRHHELLKNFKASEPW 738

Query: 3361 TRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDH 3540
             R  S  +S  KNP+E S              AR PSF M+TAADSWL +MDRLL LGD 
Sbjct: 739  ARVYSTKESNSKNPKELSSEELERELFRLFLQARKPSFEMSTAADSWLAFMDRLLTLGDD 798

Query: 3541 CATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSYRSISV 3720
               EK  L++KMI L+DIYYDALDAPK+G +V +P ELR + +PHHMERG + SY S+S+
Sbjct: 799  RTFEKDCLREKMIHLIDIYYDALDAPKSGKRVNLPKELRPEMYPHHMERGPEYSYHSMSI 858

Query: 3721 LGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDES 3900
            LG+IYDM++ FK E VP+KEIWK+ CFD+PIPE Y++ W+  Y+NYR+EMAKALNS  ES
Sbjct: 859  LGRIYDMIEEFKDEVVPKKEIWKLPCFDIPIPETYIQKWRINYENYRREMAKALNSNYES 918

Query: 3901 KNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMG-HGVEKCGFAW 4077
            K DAAN+VIKK K+ LY+APDMEES KD+ VIY EA+AIYHVTYDYA     + KC FAW
Sbjct: 919  KKDAANDVIKKNKEFLYDAPDMEESSKDTTVIYKEALAIYHVTYDYAKSMDDIGKCSFAW 978

Query: 4078 RVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLLN 4182
            +V GSALC+L AWK AGPKEKP+ ILPSV+R++LN
Sbjct: 979  KVGGSALCNLYAWKTAGPKEKPLTILPSVIREVLN 1013


>gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Erythranthe guttata]
          Length = 878

 Score = 1237 bits (3200), Expect = 0.0
 Identities = 623/870 (71%), Positives = 705/870 (81%), Gaps = 1/870 (0%)
 Frame = +1

Query: 1573 EPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIW 1752
            +P+TI+QQL+ LNKLEYRKLFLVLSYIGR+KLE VVT++ ADEIYRMN+ PM+ FE KIW
Sbjct: 60   KPITITQQLITLNKLEYRKLFLVLSYIGREKLEDVVTVEDADEIYRMNEFPMQAFENKIW 119

Query: 1753 NSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNI 1932
              YGQ+F DE DRSQ+LDWDSGKTH+YYCHV +DG YYFKGPYLNS +THLQRSLGDDNI
Sbjct: 120  KKYGQRFYDESDRSQYLDWDSGKTHVYYCHVYQDGRYYFKGPYLNSMKTHLQRSLGDDNI 179

Query: 1933 LIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEK-TYSAVKCYF 2109
            LIVKF EDGA+ T NI +EGILVGLRRY              NQ DKE+K TYS V+C+F
Sbjct: 180  LIVKFLEDGAFGTGNIAQEGILVGLRRYRFFVFKDDRKKVNKNQSDKEKKATYSNVRCFF 239

Query: 2110 VHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDLA 2289
            V +DSVSP G DENYIL  KTI EAR +FMHI+T+S+IEK +AR SLILSK+IKLE++LA
Sbjct: 240  VRVDSVSPSGYDENYILSRKTIGEARRMFMHIHTISSIEKCMARLSLILSKSIKLEINLA 299

Query: 2290 AVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNSF 2469
            AVIIE IKDIP +DE G +IHDEDGKPILHTDGTGYISEDLA++C   FSA KY TD+ F
Sbjct: 300  AVIIEKIKDIPFQDEGGFVIHDEDGKPILHTDGTGYISEDLAIRCQICFSAPKYGTDDRF 359

Query: 2470 EKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIRP 2649
            E                         PLL+QCR+FH+GYAVKGTLLVN+KLEPGTIQIRP
Sbjct: 360  E-------------------------PLLVQCRIFHEGYAVKGTLLVNRKLEPGTIQIRP 394

Query: 2650 SMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNAL 2829
            SMIKV +D    ++E FNSLEIVNISH+PGRNC SKYLIALL+YGGVPQEFFLNL+ N L
Sbjct: 395  SMIKVERDHNIKVEEAFNSLEIVNISHKPGRNCLSKYLIALLSYGGVPQEFFLNLVANTL 454

Query: 2830 VDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLK 3009
             D RNVY+NRRAALRVASNH GLD+GF+AQRMI SGVPL+EPYLQLCLSNLE+GEKTKLK
Sbjct: 455  EDARNVYTNRRAALRVASNHAGLDYGFLAQRMICSGVPLDEPYLQLCLSNLENGEKTKLK 514

Query: 3010 QGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVY 3189
             GKIP++ESFYLMGTADPTGVLN DEVCVIL NGQISGKVLVYRNPGMHFGDVH+MEAVY
Sbjct: 515  TGKIPLNESFYLMGTADPTGVLNNDEVCVILGNGQISGKVLVYRNPGMHFGDVHVMEAVY 574

Query: 3190 VKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRS 3369
            VKE+EE VGNAKYG+FFSTKG+ SAAYEMATGDFDGDMYWVSRNPEL             
Sbjct: 575  VKELEEFVGNAKYGVFFSTKGATSAAYEMATGDFDGDMYWVSRNPEL------------E 622

Query: 3370 NSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCAT 3549
            N + Q                        AR+PSF+MATAADSWLT+MDRLL LGD    
Sbjct: 623  NELFQ--------------------LCLEARTPSFNMATAADSWLTFMDRLLTLGDDRTA 662

Query: 3550 EKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSYRSISVLGQ 3729
            EKKSL  KMI+LVDIYYDALDAPK+G KV VP ELR + +PHHME+G + SY S SVLGQ
Sbjct: 663  EKKSLMKKMIRLVDIYYDALDAPKSGKKVKVPEELRAEMYPHHMEKGSELSYHSSSVLGQ 722

Query: 3730 IYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDESKND 3909
            IYD V A K++ VP+KEIWK+ CFDVPIPEIYV+MWK+RY++YR+EM KAL SG+ES+ND
Sbjct: 723  IYDRVDALKNDFVPRKEIWKLPCFDVPIPEIYVKMWKSRYESYRREMTKALKSGNESRND 782

Query: 3910 AANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMGHGVEKCGFAWRVAG 4089
            AA+EVIKKYKQLLYEA DMEES K SEVIYDEAIAIYHVTYDYAM HGVEKC FAWR+A 
Sbjct: 783  AADEVIKKYKQLLYEAGDMEESAKSSEVIYDEAIAIYHVTYDYAMEHGVEKCNFAWRIAA 842

Query: 4090 SALCSLCAWKLAGPKEKPIVILPSVLRDLL 4179
            SALC+LCAWKLAGP+EKP+ ILPS+LR+LL
Sbjct: 843  SALCNLCAWKLAGPREKPLPILPSLLRELL 872


>gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]
          Length = 898

 Score = 1057 bits (2734), Expect = 0.0
 Identities = 556/923 (60%), Positives = 669/923 (72%), Gaps = 4/923 (0%)
 Frame = +1

Query: 1021 KMGASPHQEVRLPQSVEATIQRICVEKKQPAIKNYA--REMLAEIGEQASLEVLTTILFS 1194
            KM  S H++VRLP+SVEA I+RI VEK+QP +   +  R+ML EIGEQ SL++L  I  S
Sbjct: 7    KMDGSSHEDVRLPESVEAAIERIAVEKQQPPLPRNSDVRKMLREIGEQPSLKLLNIIHSS 66

Query: 1195 NTPIRSFSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGE 1374
             TPI+SF GFV+ LV+  YP  AA + + Y+SP   P T  I+SPSS SP ++    NGE
Sbjct: 67   KTPIKSFGGFVSKLVRTYYPNQAAAIPSPYKSP---PPT--IYSPSSISPNVAR---NGE 118

Query: 1375 NLQSPLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAG 1554
            +LQS L         SNL  TG QNISCQLSFEDE  E R+                   
Sbjct: 119  SLQSSL---------SNLQGTGFQNISCQLSFEDEALESRN------------------- 150

Query: 1555 ERRETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKV 1734
                  E M IS QL+ LNKLE+RKLFL+LSY   QKLE V+T + A+++Y    LPM  
Sbjct: 151  ------ESMAISPQLLTLNKLEFRKLFLLLSYANGQKLEDVLTTEEANQVYANKALPMPE 204

Query: 1735 FEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRS 1914
            FE  IW+ +G ++C+  DRSQ LDWDSGKTH+Y CHV  DGSY FKGPYLNSSRTHLQRS
Sbjct: 205  FERLIWDKFGYRYCNGLDRSQHLDWDSGKTHIYNCHVNPDGSYSFKGPYLNSSRTHLQRS 264

Query: 1915 LGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEKTYSA 2094
            LGDDN+L VKF     Y    IVEEG++VGLRRY              NQ +  + ++SA
Sbjct: 265  LGDDNVLTVKFLAKEIYPARKIVEEGLIVGLRRYRFFVFKDEQKKAKKNQAEDNKSSHSA 324

Query: 2095 VKCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKL 2274
            VKCYFVH+DS+S    +E+Y+L+ K++SEAR LFMHI+TLSTIEKY+AR SLILSKT ++
Sbjct: 325  VKCYFVHLDSISSNDHEEDYVLFRKSVSEARRLFMHIHTLSTIEKYMARLSLILSKTTRI 384

Query: 2275 EVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYI 2454
            ++D AA+I+EII+DIP +D++GSII DEDGKPILHTDGTGYIS+DLAMKC KDF A+ + 
Sbjct: 385  DLDFAAIIVEIIEDIPFQDDNGSIIRDEDGKPILHTDGTGYISQDLAMKCSKDFYASMHN 444

Query: 2455 TDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGT 2634
            T+++FE                         PLL+QCRLFHDGYAVKGTLLVN+KLEPG 
Sbjct: 445  TNSTFE-------------------------PLLIQCRLFHDGYAVKGTLLVNRKLEPGR 479

Query: 2635 IQIRPSMIKVVKDRTSPMKET--FNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFL 2808
            IQIRPSMIKV KD +   +E   FNSLEI  IS RP RN  SKYLI+LL+YGGVPQEFFL
Sbjct: 480  IQIRPSMIKVEKDHSMESEEILKFNSLEINTISRRPNRNFLSKYLISLLSYGGVPQEFFL 539

Query: 2809 NLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLES 2988
            NLL  AL +T+NVYSNRR ALRVAS+HD  D G +AQRMI  G+PL+EPYLQ CLS LES
Sbjct: 540  NLLFKALEETQNVYSNRRVALRVASHHDDWDLGLMAQRMICCGIPLDEPYLQHCLSKLES 599

Query: 2989 GEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDV 3168
             +K KLK+G+IPV ES YLMGTADPTGVL+ DEVCVILD+GQISGKVLVYRNPGMHFGD+
Sbjct: 600  SQKKKLKEGRIPVDESCYLMGTADPTGVLHNDEVCVILDSGQISGKVLVYRNPGMHFGDI 659

Query: 3169 HIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKA 3348
            H+MEAVYVK +EE +GNAKYGIFFSTKG RSAAYE+ATGDFDGD YWVSRNPELL +FKA
Sbjct: 660  HVMEAVYVKGLEEFIGNAKYGIFFSTKGQRSAAYEIATGDFDGDTYWVSRNPELLTFFKA 719

Query: 3349 HKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLI 3528
             +PW R    P +EK++P++FS              +R+PS++M TAADSWLTYMDRLL 
Sbjct: 720  SEPWKRVYPAPDAEKRDPRKFSSSELERELFQLFLDSRTPSYNMGTAADSWLTYMDRLLT 779

Query: 3529 LGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSYR 3708
            LGD  A EK SLK KMI+LVDIYYDALDAPK+G K+ VP +L+ + FPHHME+ ++ SY 
Sbjct: 780  LGDDRAAEKNSLKTKMIKLVDIYYDALDAPKSGKKINVPDDLKAELFPHHMEKAIEKSYH 839

Query: 3709 SISVLGQIYDMVQAFKSEAVPQK 3777
            S S+LGQIYD V  F S+AV +K
Sbjct: 840  SSSILGQIYDNVLEFNSDAVSRK 862


>emb|CDP03267.1| unnamed protein product [Coffea canephora]
          Length = 1019

 Score = 1014 bits (2623), Expect = 0.0
 Identities = 548/1068 (51%), Positives = 721/1068 (67%), Gaps = 15/1068 (1%)
 Frame = +1

Query: 1024 MGASPHQEVR----LPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILF 1191
            MG+S   ++R    L + VE  I++IC+EK+QP   +YAR+ L +IGE+ + E++  I +
Sbjct: 1    MGSSLQTQLRGSVSLSEPVERMIEQICIEKQQPPPDHYARQRLFDIGEEKAYEIVRRIYY 60

Query: 1192 SNTPIRS-FSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLN 1368
            S   IR+  S ++                   +SPQ SP  Q   +PS  +P    H  +
Sbjct: 61   SEEAIRTTLSRYITWFT---------------DSPQ-SPFRQSSSTPSPRTPPPQLHASS 104

Query: 1369 GENLQSPLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPL 1548
                ++  L FP   P+               S  DE+P              +   SPL
Sbjct: 105  SPPKRA--LHFPPPPPTC-------------FSQCDESPCS--------PMSKLNMSSPL 141

Query: 1549 AGERRETTEPMTISQQLMILNKLEYRKLFLVLSYIGR---QKLEAVVTLDGADEIYRMND 1719
                       T + QL +L++LE+RK FL+ SYIGR    KLE V+T + A++I  M +
Sbjct: 142  PHPESARPSQTTHNYQLTVLSQLEFRKFFLLYSYIGRLVLSKLEEVITTENANKILEMKN 201

Query: 1720 LPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRT 1899
            LPM V+E+ IW+  G++ C   DR + +DWDSGKTH YYCHV +DGSY FKGPYL + RT
Sbjct: 202  LPMGVYESCIWDMCGKQLCAPSDRIEVIDWDSGKTHFYYCHVYEDGSYCFKGPYLKTIRT 261

Query: 1900 HLQRSLGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQ--MDK 2073
            HLQR+LGDDN+LIV+F +DG   +D I+E+GI+VGLRRY               +  ++K
Sbjct: 262  HLQRALGDDNVLIVRFVDDGKCNSDRIIEDGIIVGLRRYRFFAFKDECKDAKKKKKGLEK 321

Query: 2074 EEKTYSAV-KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSL 2250
             +   SA  KCYFV  DS++  G DE Y+L    ++EAR LFM +N++S++ KYIARFSL
Sbjct: 322  NKTPLSAFPKCYFVRFDSIATSGTDEPYLLSSLEVNEARRLFMDVNSISSMAKYIARFSL 381

Query: 2251 ILSKTIKLEVDLAAVIIE-IIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCP 2427
            ILSKTIKL VDL++V+I+  I+DI  +D +   I D++G+P++HTDGTG+ISEDLA+KCP
Sbjct: 382  ILSKTIKLPVDLSSVVIDDTIQDIECRDGNNRPIKDDNGEPLIHTDGTGFISEDLALKCP 441

Query: 2428 KDFSAAKYITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLL 2607
            +DF  A+YI D  F+K   FV F +  F  RGTEARN++PPLLMQCRLF  G AVKGTLL
Sbjct: 442  QDFGRAQYIKDKDFQKFHNFVGFVDAPFDVRGTEARNRDPPLLMQCRLFSQGLAVKGTLL 501

Query: 2608 VNKKLEPGTIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGG 2787
            VNKKL+ GTIQIRPSMIKV KDR  P+ +TF+SLEIV +SHRP R   SKYLIALL+YGG
Sbjct: 502  VNKKLKAGTIQIRPSMIKVQKDREGPIGQTFDSLEIVAVSHRPRRCHLSKYLIALLSYGG 561

Query: 2788 VPQEFFLNLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQL 2967
            VP+ FF++L+ + L +T  V++++RAA +VA + +G      A R++ +G+PLNEP+LQ 
Sbjct: 562  VPRTFFVDLMTSVLEETNAVFTDKRAAFKVALHQEGFYDAGGALRLLLAGIPLNEPHLQK 621

Query: 2968 CLSNLESGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNP 3147
             LS L + E+T LK+GKIP+SESFYLMGTADPTG+L  +EVCV+LDNGQ+SGKVL+YRNP
Sbjct: 622  RLSELANNERTLLKEGKIPISESFYLMGTADPTGLLKENEVCVVLDNGQVSGKVLLYRNP 681

Query: 3148 GMHFGDVHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPE 3327
            G+HFGDVH++EAVYV  +E+++GNAKYGIFFSTKG RS A E+A GDFDGDMYWVSRNP+
Sbjct: 682  GLHFGDVHVLEAVYVPALEDIIGNAKYGIFFSTKGRRSVASEIANGDFDGDMYWVSRNPQ 741

Query: 3328 LLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLT 3507
            LLKYF A  PWTR     ++E+KNP E+S               + PS++MA AADSWL 
Sbjct: 742  LLKYFSASPPWTRVYPSLRAERKNPNEYS--AEQLEHELFRHFLKKPSYNMAVAADSWLA 799

Query: 3508 YMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMER 3687
            +MDRLLILGD  A EK +LK+ M++L+DIYYDALDAPK G KV VP EL+ + FPH+M  
Sbjct: 800  FMDRLLILGDDNAKEKDALKENMLKLIDIYYDALDAPKRGTKVIVPEELKAERFPHYM-- 857

Query: 3688 GLDSSYRSISVLGQIYDMVQAFKSEAVPQK--EIWKMSCFDVPIPEIYVEMWKARYDNYR 3861
            G D SYRS SVLG IYD  +AF+SE   Q+   I K+ CFDV +P+ Y+  W+ RY+ YR
Sbjct: 858  GKDGSYRSTSVLGDIYDRAEAFQSE---QRCIAIEKLPCFDVEVPQNYLSSWRGRYNEYR 914

Query: 3862 KEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA 4041
            KEM  AL   DES+NDAA++VIKKYK+LLYEA + EES KD + I+ EA+A+Y VTYDYA
Sbjct: 915  KEMNVALQKDDESRNDAADDVIKKYKRLLYEAAEFEESKKDVQEIHKEALALYQVTYDYA 974

Query: 4042 MG-HGVEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLLN 4182
            +      KCGFAW+ AGSAL S  A    G  E+ + + PS LR+L +
Sbjct: 975  ISTKDAGKCGFAWKAAGSALLSYFA---TGRNERLVPVSPSALRELFS 1019


>ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana sylvestris]
          Length = 1023

 Score =  994 bits (2571), Expect = 0.0
 Identities = 546/1057 (51%), Positives = 710/1057 (67%), Gaps = 12/1057 (1%)
 Frame = +1

Query: 1045 EVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSG 1221
            E  LP S+EA +++IC E+ Q       R  L  IGEQ SL +L  I  S   IR + S 
Sbjct: 20   EAPLPSSIEAMLRKICSEQCQEPPDAGIRRRLGSIGEQGSLAILRII--STRAIRKTLSA 77

Query: 1222 FVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQSPLLSF 1401
            F+  L+ + YP   ++      SP ASPQ +       TSP + P T   + +Q    S 
Sbjct: 78   FLVYLMDR-YPDCLSS------SPFASPQKR-------TSPSLLP-TPESKRVQGESSSK 122

Query: 1402 PVESPSSN--LDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRETTE 1575
            P     S+  +    PQ +  QLSF DE             SP    ++P          
Sbjct: 123  PKPKIGSSPCVQFASPQRVIRQLSFGDEP------------SPESNCRTP---------- 160

Query: 1576 PMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIWN 1755
             + ISQQLMIL +LE+RKLFLVLSYIG +KLE V++   AD+I R   LPM  FE++IWN
Sbjct: 161  SLNISQQLMILGELEFRKLFLVLSYIGSKKLEDVISPKIADDIVRKKTLPMTDFESEIWN 220

Query: 1756 SYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNIL 1935
            ++G+    E DRS++LDWD GKTHLYYCH+ ++G   FKGPYLN++RTHLQR+LGD+N+L
Sbjct: 221  AFGKACYTESDRSKYLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDENVL 280

Query: 1936 IVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEKTYSAV------ 2097
            IVKF ED   A + IVEEGILVG RRY                 DKE K   A+      
Sbjct: 281  IVKFVEDACCA-NIIVEEGILVGFRRYRFFVYKD----------DKERKKTPAIMKTKTA 329

Query: 2098 --KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIK 2271
              KCYFV  +S+  Y    +Y+  G+  SEARC FMH++ +S + KY AR SLILSKTIK
Sbjct: 330  SLKCYFVRFESIETYNHGGSYVFAGRRTSEARCHFMHVHMVSNMAKYAARLSLILSKTIK 389

Query: 2272 LEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKY 2451
            L+V+LA+V IE ++DI  +DE G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A+Y
Sbjct: 390  LQVNLASVTIERVEDILCRDESGCIICDEDGEPCIHTDGTGFISEDLAMRCPKDFSKAEY 449

Query: 2452 ITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPG 2631
            I D ++E     VD E++  ++RG  + NKEPPLLMQCRL+ +G AVKGT L+N+K+   
Sbjct: 450  IKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCRLYKNGCAVKGTFLINRKIGSR 509

Query: 2632 TIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLN 2811
             IQIRPSM+KV  D T     TFNSLE+V IS+RP +   SK+LI+LL+YGGV +EFF+ 
Sbjct: 510  KIQIRPSMVKVETDPTISSLPTFNSLEVVAISNRPRKTYLSKHLISLLSYGGVGREFFME 569

Query: 2812 LLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESG 2991
            +L +AL +T+ VY  +RAAL+VA N+  +D   +A RMISSGVPLNEP+L   LS L   
Sbjct: 570  ILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARMISSGVPLNEPHLHARLSRLAKI 629

Query: 2992 EKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVH 3171
            E++KL+ GK+P+S+SFYLMGTADPTGVL  +EVCVILD+GQ+SG+VLVYRNPG+HFGDVH
Sbjct: 630  ERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGDVH 689

Query: 3172 IMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAH 3351
            +M+A YV+E+ ++VG+AKYGI FSTKG RSAA E+A GDFDGDMYWVS N +L+  ++A 
Sbjct: 690  VMKARYVEELVDIVGDAKYGIVFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYRAS 749

Query: 3352 KPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLIL 3531
            KPWTR++S P++  K P EFS              A+S   SM+ AADSWL +MDRLL+L
Sbjct: 750  KPWTRTHSTPKAVSKKPTEFSADELEYELFRQFLRAKSKGASMSVAADSWLAFMDRLLML 809

Query: 3532 GDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSYRS 3711
             D  A    SLK KM+ L+DIYYDALDAPK+G KV +P +L+ + FPH+MERG   SY S
Sbjct: 810  RDDDADGMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSYHS 869

Query: 3712 ISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSG 3891
             S+LGQIYD V ++  E +   EI K+ CFDV IP+    +W+ RY+ Y+K+M  A+NSG
Sbjct: 870  TSILGQIYDYVDSYPDEDLCITEISKLPCFDVEIPDECTTLWRERYEEYKKDMTMAMNSG 929

Query: 3892 DESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVEKCG 4068
             E KN A NEVIKKYK+LLY AP+ E+S + +E I++EA+A+YHVTYD A + + +EKCG
Sbjct: 930  CEVKNSACNEVIKKYKKLLYGAPEFEQSVRKTEDIFNEALALYHVTYDNARITYSIEKCG 989

Query: 4069 FAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 4179
            FAW+VAGSALC + A      KE    ILPS+L+D+L
Sbjct: 990  FAWKVAGSALCRIHAMY---QKENAFPILPSILQDIL 1023


>ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1020

 Score =  989 bits (2558), Expect = 0.0
 Identities = 546/1059 (51%), Positives = 706/1059 (66%), Gaps = 14/1059 (1%)
 Frame = +1

Query: 1045 EVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSG 1221
            E  LP SVEA +++IC E+ Q       R  L  IGEQ SL +L  I  S+ PIR + S 
Sbjct: 17   EAPLPSSVEAMLRKICSEQCQEPPDVGIRRRLGSIGEQGSLTILRII--SSRPIRKTLSA 74

Query: 1222 FVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISP----HTLNGENLQSP 1389
            F+  L+ + YP   ++      SP ASPQ +       TSP + P      + GE+   P
Sbjct: 75   FLVYLMDR-YPDCLSS------SPFASPQKR-------TSPSLLPTPESKRVQGESSTKP 120

Query: 1390 LLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRET 1569
                P    S  +    P  +  QLSF DE             SP    ++P        
Sbjct: 121  K---PKIGSSPCVQFASPHRVVRQLSFRDEP------------SPESNCRTP-------- 157

Query: 1570 TEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKI 1749
              P  ISQQLMIL++LE+RKLFLVLSYIG + LE V++   AD+I R   LPM  FE++I
Sbjct: 158  --PPNISQQLMILSELEFRKLFLVLSYIGSKTLEDVISPKIADDIVRKKTLPMTDFESEI 215

Query: 1750 WNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDN 1929
            WN++G+    E DRS++LDWD GKTHLYYCH+ ++G   FKGPYLN++RTHLQR+LGD+N
Sbjct: 216  WNAFGKACYAESDRSKYLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDEN 275

Query: 1930 ILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEKTYSAV---- 2097
            +LIVKF ED   A + IVEEGILVG RRY                 DKE K   A+    
Sbjct: 276  VLIVKFVEDACCA-NIIVEEGILVGFRRYRFFVYKD----------DKERKKTPAIMKTK 324

Query: 2098 ----KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKT 2265
                KCYFV  +S+  Y    +Y+   K  SEARC FMH++ +S + KY AR SLILSKT
Sbjct: 325  TASLKCYFVRFESIETYNHGGSYVFAAKRTSEARCHFMHVHMVSNMAKYAARLSLILSKT 384

Query: 2266 IKLEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAA 2445
            IKL+V+LA+V IE ++DI  +DE G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A
Sbjct: 385  IKLQVNLASVTIERVEDILCRDESGCIICDEDGEPRIHTDGTGFISEDLAMRCPKDFSKA 444

Query: 2446 KYITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLE 2625
            +YI D ++E     VD E++  ++RG  + NKEPPLLMQCRLF +G AVKGT LVN+K+ 
Sbjct: 445  EYIKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCRLFKNGCAVKGTFLVNRKIG 504

Query: 2626 PGTIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFF 2805
               IQIRPSM+KV  D T     TFNSLE+V ISHRP +   SK+LI+LL+YGGV  EFF
Sbjct: 505  SRKIQIRPSMVKVETDPTISALPTFNSLEVVAISHRPRKTYLSKHLISLLSYGGVGNEFF 564

Query: 2806 LNLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLE 2985
            + +L +AL +T+ VY  +RAAL+VA N+  +D   +A R+ISSGVPLNEP+L   LS L 
Sbjct: 565  MEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARLISSGVPLNEPHLHARLSRLA 624

Query: 2986 SGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGD 3165
              E++KL+ GK+P+S+SFYLMGTADPTGVL  +EVCVILD+GQ+SG+VLVYRNPG+HFGD
Sbjct: 625  KIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGD 684

Query: 3166 VHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFK 3345
            VH+M+A YV+E+ ++VG+AKYGIFFSTKG RSAA E+A GDFDGDMYWVS N +L+  ++
Sbjct: 685  VHVMKARYVEELVDIVGDAKYGIFFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYR 744

Query: 3346 AHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLL 3525
            A KPWTR +S P++  K P EFS              A+S   SM+ AADSWL +MD LL
Sbjct: 745  ASKPWTRMHSTPKAVSKKPTEFSADELEYELFRQFLGAKSKGASMSVAADSWLAFMDLLL 804

Query: 3526 ILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSY 3705
            +L D       SLK K++ L+DIYYDALDAPK+G KV +P +L+ + FPH+MERG   SY
Sbjct: 805  MLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSY 864

Query: 3706 RSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALN 3885
             S S+LGQIYD V ++  E +   EI K+ CFDV IP+  + +W  RY+ Y+K+M  A+N
Sbjct: 865  HSTSILGQIYDYVDSYPDEDLCITEISKLPCFDVEIPDECMALWGERYEEYKKDMTMAMN 924

Query: 3886 SGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVEK 4062
            SG E KN A NEVIKKYK+LLY AP+ E+S + ++ I++EA+A+YHVTYD A + + +EK
Sbjct: 925  SGCEVKNSACNEVIKKYKKLLYGAPEFEQSVRKTKDIFNEALALYHVTYDNARITYSIEK 984

Query: 4063 CGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 4179
            CGFAW+VAGSALC + A      KE    ILPS+L+D+L
Sbjct: 985  CGFAWKVAGSALCRIHAMY---HKENAFPILPSILQDIL 1020


>ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana sylvestris]
          Length = 1021

 Score =  988 bits (2553), Expect = 0.0
 Identities = 545/1057 (51%), Positives = 708/1057 (66%), Gaps = 12/1057 (1%)
 Frame = +1

Query: 1045 EVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSG 1221
            E  LP S+EA +++IC E+ Q       R  L  IGEQ SL +L  I  S   IR + S 
Sbjct: 20   EAPLPSSIEAMLRKICSEQCQEPPDAGIRRRLGSIGEQGSLAILRII--STRAIRKTLSA 77

Query: 1222 FVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQSPLLSF 1401
            F+  L+ + YP   ++      SP ASPQ +       TSP + P T   + +Q    S 
Sbjct: 78   FLVYLMDR-YPDCLSS------SPFASPQKR-------TSPSLLP-TPESKRVQGESSSK 122

Query: 1402 PVESPSSN--LDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRETTE 1575
            P     S+  +    PQ +  QLSF DE             SP    ++P          
Sbjct: 123  PKPKIGSSPCVQFASPQRVIRQLSFGDEP------------SPESNCRTP---------- 160

Query: 1576 PMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIWN 1755
             + ISQQLMIL +LE+RKLFLVLSYIG +KLE V++   AD+I R   LPM  FE++IWN
Sbjct: 161  SLNISQQLMILGELEFRKLFLVLSYIGSKKLEDVISPKIADDIVRKKTLPMTDFESEIWN 220

Query: 1756 SYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNIL 1935
            ++G+    E DRS++LDWD GKTHLYYCH+ ++G   FKGPYLN++RTHLQR+LGD+N+L
Sbjct: 221  AFGKACYTESDRSKYLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDENVL 280

Query: 1936 IVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEKTYSAV------ 2097
            IVKF ED   A + IVEEGILVG RRY                 DKE K   A+      
Sbjct: 281  IVKFVEDACCA-NIIVEEGILVGFRRYRFFVYKD----------DKERKKTPAIMKTKTA 329

Query: 2098 --KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIK 2271
              KCYFV  +S+  Y    +Y+  G+  SEARC FMH++ +S + KY AR SLILSKTIK
Sbjct: 330  SLKCYFVRFESIETYNHGGSYVFAGRRTSEARCHFMHVHMVSNMAKYAARLSLILSKTIK 389

Query: 2272 LEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKY 2451
            L+V+LA+V IE ++DI  +DE G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A+Y
Sbjct: 390  LQVNLASVTIERVEDILCRDESGCIICDEDGEPCIHTDGTGFISEDLAMRCPKDFSKAEY 449

Query: 2452 ITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPG 2631
            I D ++E     VD E++  ++RG  + NKEPPLLMQCRL+ +G AVKGT L+N+K+   
Sbjct: 450  IKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCRLYKNGCAVKGTFLINRKIGSR 509

Query: 2632 TIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLN 2811
             IQIRPSM+KV  D T     TFNSLE+V I  RP +   SK+LI+LL+YGGV +EFF+ 
Sbjct: 510  KIQIRPSMVKVETDPTISSLPTFNSLEVVAI--RPRKTYLSKHLISLLSYGGVGREFFME 567

Query: 2812 LLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESG 2991
            +L +AL +T+ VY  +RAAL+VA N+  +D   +A RMISSGVPLNEP+L   LS L   
Sbjct: 568  ILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARMISSGVPLNEPHLHARLSRLAKI 627

Query: 2992 EKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVH 3171
            E++KL+ GK+P+S+SFYLMGTADPTGVL  +EVCVILD+GQ+SG+VLVYRNPG+HFGDVH
Sbjct: 628  ERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGDVH 687

Query: 3172 IMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAH 3351
            +M+A YV+E+ ++VG+AKYGI FSTKG RSAA E+A GDFDGDMYWVS N +L+  ++A 
Sbjct: 688  VMKARYVEELVDIVGDAKYGIVFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYRAS 747

Query: 3352 KPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLIL 3531
            KPWTR++S P++  K P EFS              A+S   SM+ AADSWL +MDRLL+L
Sbjct: 748  KPWTRTHSTPKAVSKKPTEFSADELEYELFRQFLRAKSKGASMSVAADSWLAFMDRLLML 807

Query: 3532 GDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSYRS 3711
             D  A    SLK KM+ L+DIYYDALDAPK+G KV +P +L+ + FPH+MERG   SY S
Sbjct: 808  RDDDADGMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSYHS 867

Query: 3712 ISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSG 3891
             S+LGQIYD V ++  E +   EI K+ CFDV IP+    +W+ RY+ Y+K+M  A+NSG
Sbjct: 868  TSILGQIYDYVDSYPDEDLCITEISKLPCFDVEIPDECTTLWRERYEEYKKDMTMAMNSG 927

Query: 3892 DESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVEKCG 4068
             E KN A NEVIKKYK+LLY AP+ E+S + +E I++EA+A+YHVTYD A + + +EKCG
Sbjct: 928  CEVKNSACNEVIKKYKKLLYGAPEFEQSVRKTEDIFNEALALYHVTYDNARITYSIEKCG 987

Query: 4069 FAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 4179
            FAW+VAGSALC + A      KE    ILPS+L+D+L
Sbjct: 988  FAWKVAGSALCRIHAMY---QKENAFPILPSILQDIL 1021


>ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1018

 Score =  980 bits (2533), Expect = 0.0
 Identities = 544/1059 (51%), Positives = 704/1059 (66%), Gaps = 14/1059 (1%)
 Frame = +1

Query: 1045 EVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSG 1221
            E  LP SVEA +++IC E+ Q       R  L  IGEQ SL +L  I  S+ PIR + S 
Sbjct: 17   EAPLPSSVEAMLRKICSEQCQEPPDVGIRRRLGSIGEQGSLTILRII--SSRPIRKTLSA 74

Query: 1222 FVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISP----HTLNGENLQSP 1389
            F+  L+ + YP   ++      SP ASPQ +       TSP + P      + GE+   P
Sbjct: 75   FLVYLMDR-YPDCLSS------SPFASPQKR-------TSPSLLPTPESKRVQGESSTKP 120

Query: 1390 LLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRET 1569
                P    S  +    P  +  QLSF DE             SP    ++P        
Sbjct: 121  K---PKIGSSPCVQFASPHRVVRQLSFRDEP------------SPESNCRTP-------- 157

Query: 1570 TEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKI 1749
              P  ISQQLMIL++LE+RKLFLVLSYIG + LE V++   AD+I R   LPM  FE++I
Sbjct: 158  --PPNISQQLMILSELEFRKLFLVLSYIGSKTLEDVISPKIADDIVRKKTLPMTDFESEI 215

Query: 1750 WNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDN 1929
            WN++G+    E DRS++LDWD GKTHLYYCH+ ++G   FKGPYLN++RTHLQR+LGD+N
Sbjct: 216  WNAFGKACYAESDRSKYLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDEN 275

Query: 1930 ILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEKTYSAV---- 2097
            +LIVKF ED   A + IVEEGILVG RRY                 DKE K   A+    
Sbjct: 276  VLIVKFVEDACCA-NIIVEEGILVGFRRYRFFVYKD----------DKERKKTPAIMKTK 324

Query: 2098 ----KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKT 2265
                KCYFV  +S+  Y    +Y+   K  SEARC FMH++ +S + KY AR SLILSKT
Sbjct: 325  TASLKCYFVRFESIETYNHGGSYVFAAKRTSEARCHFMHVHMVSNMAKYAARLSLILSKT 384

Query: 2266 IKLEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAA 2445
            IKL+V+LA+V IE ++DI  +DE G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A
Sbjct: 385  IKLQVNLASVTIERVEDILCRDESGCIICDEDGEPRIHTDGTGFISEDLAMRCPKDFSKA 444

Query: 2446 KYITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLE 2625
            +YI D ++E     VD E++  ++RG  + NKEPPLLMQCRLF +G AVKGT LVN+K+ 
Sbjct: 445  EYIKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCRLFKNGCAVKGTFLVNRKIG 504

Query: 2626 PGTIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFF 2805
               IQIRPSM+KV  D T     TFNSLE+V I  RP +   SK+LI+LL+YGGV  EFF
Sbjct: 505  SRKIQIRPSMVKVETDPTISALPTFNSLEVVAI--RPRKTYLSKHLISLLSYGGVGNEFF 562

Query: 2806 LNLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLE 2985
            + +L +AL +T+ VY  +RAAL+VA N+  +D   +A R+ISSGVPLNEP+L   LS L 
Sbjct: 563  MEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARLISSGVPLNEPHLHARLSRLA 622

Query: 2986 SGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGD 3165
              E++KL+ GK+P+S+SFYLMGTADPTGVL  +EVCVILD+GQ+SG+VLVYRNPG+HFGD
Sbjct: 623  KIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGD 682

Query: 3166 VHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFK 3345
            VH+M+A YV+E+ ++VG+AKYGIFFSTKG RSAA E+A GDFDGDMYWVS N +L+  ++
Sbjct: 683  VHVMKARYVEELVDIVGDAKYGIFFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYR 742

Query: 3346 AHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLL 3525
            A KPWTR +S P++  K P EFS              A+S   SM+ AADSWL +MD LL
Sbjct: 743  ASKPWTRMHSTPKAVSKKPTEFSADELEYELFRQFLGAKSKGASMSVAADSWLAFMDLLL 802

Query: 3526 ILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSY 3705
            +L D       SLK K++ L+DIYYDALDAPK+G KV +P +L+ + FPH+MERG   SY
Sbjct: 803  MLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSY 862

Query: 3706 RSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALN 3885
             S S+LGQIYD V ++  E +   EI K+ CFDV IP+  + +W  RY+ Y+K+M  A+N
Sbjct: 863  HSTSILGQIYDYVDSYPDEDLCITEISKLPCFDVEIPDECMALWGERYEEYKKDMTMAMN 922

Query: 3886 SGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVEK 4062
            SG E KN A NEVIKKYK+LLY AP+ E+S + ++ I++EA+A+YHVTYD A + + +EK
Sbjct: 923  SGCEVKNSACNEVIKKYKKLLYGAPEFEQSVRKTKDIFNEALALYHVTYDNARITYSIEK 982

Query: 4063 CGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 4179
            CGFAW+VAGSALC + A      KE    ILPS+L+D+L
Sbjct: 983  CGFAWKVAGSALCRIHAMY---HKENAFPILPSILQDIL 1018


>ref|XP_010322170.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Solanum
            lycopersicum] gi|723706114|ref|XP_010322171.1| PREDICTED:
            probable RNA-dependent RNA polymerase 3 [Solanum
            lycopersicum]
          Length = 1014

 Score =  959 bits (2478), Expect = 0.0
 Identities = 531/1046 (50%), Positives = 699/1046 (66%), Gaps = 4/1046 (0%)
 Frame = +1

Query: 1054 LPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSGFVA 1230
            LP SVE  + RIC E+ Q       R  L+ IGE+ SLE+L  I  S  PI+ S S F+ 
Sbjct: 16   LPYSVETMLDRICKEQGQKPPCTGIRRRLSSIGEKGSLEMLKII--SRRPIKKSLSAFLV 73

Query: 1231 CLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPH--TLNGENLQSPLLSFP 1404
             ++ + YP        D  S  +SP    +   SS   + SP    L GE+     L   
Sbjct: 74   YMIDR-YP--------DCLSSSSSPFNCLLKRSSSPRLFPSPEGKRLQGESSSKSKLEMG 124

Query: 1405 VESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRETTEPMT 1584
            + + +S      PQ ++ QLSF +E PE            + RR SP             
Sbjct: 125  LLACAS------PQKVARQLSFCEE-PES-----------NCRRTSPY------------ 154

Query: 1585 ISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIWNSYG 1764
            +SQQLMILN+LE+RKLFLVLSYIG  KLE V++   AD+I R  +L M  FE++IWN++G
Sbjct: 155  VSQQLMILNELEFRKLFLVLSYIGCNKLEDVISPQIADDIVRKKNLSMTDFESEIWNAFG 214

Query: 1765 QKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVK 1944
            +      DRS++LDW+  KTH+YYCH+ ++G   FKGPYLN+ RTHLQR+LGDDN+LIVK
Sbjct: 215  KACYAVSDRSKYLDWNCRKTHIYYCHIKQNGYCSFKGPYLNTLRTHLQRALGDDNVLIVK 274

Query: 1945 FSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEKTYSAVKCYFVHIDS 2124
            F ED + A + I+EEGILVGLRRY                M K +   +++KCYFV  +S
Sbjct: 275  FVEDTSCA-NIILEEGILVGLRRYRFFVYKDDKERKKSPAMMKTKT--ASLKCYFVRFES 331

Query: 2125 VSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDLAAVIIE 2304
            +      E+Y+   KTIS+ARC FMH++ +S + KY AR SLILSKTIKL+ DL +V IE
Sbjct: 332  IGTCNDGESYVFSTKTISQARCKFMHVHMVSNMAKYAARLSLILSKTIKLQTDLDSVTIE 391

Query: 2305 IIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNSFEKHDQ 2484
             I+DI  +DE+G II DEDG+P +HTDGTG+ISEDLAM CPKDFS A+YI D ++E    
Sbjct: 392  RIEDILCRDENGCIIQDEDGEPRIHTDGTGFISEDLAMHCPKDFSKAEYIKDENYENFVD 451

Query: 2485 FVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIRPSMIKV 2664
             VD ++V  ++R + +RN++PPLLMQCRLF +G AVKGT LVN+K+    I IRPSM+KV
Sbjct: 452  IVDLDDVNVERRVSVSRNRKPPLLMQCRLFFNGCAVKGTFLVNRKIGSRKIHIRPSMVKV 511

Query: 2665 VKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNALVDTRN 2844
              D T     TF+SLEIV ISHRP +   SK LI+LL+YGGV +E+F+ LL +AL +T+ 
Sbjct: 512  EIDPTISSIPTFDSLEIVAISHRPNKAYLSKNLISLLSYGGVHKEYFMELLGSALEETKQ 571

Query: 2845 VYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIP 3024
            VY  +RAAL+VA N+  +D   +  RMISSG+PLNEP+L   LS L   E+TKL+ GK+P
Sbjct: 572  VYLRKRAALKVAINYREMDDECLTARMISSGIPLNEPHLHARLSRLAKIERTKLRGGKLP 631

Query: 3025 VSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEME 3204
            +S+SFYLMGTADPTGVL ++EVCVILDNGQ+SG+VLVYRNPG+HFGDVH+M+A YV+E+ 
Sbjct: 632  ISDSFYLMGTADPTGVLESNEVCVILDNGQVSGRVLVYRNPGLHFGDVHVMKARYVEELA 691

Query: 3205 EVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQ 3384
            +VVG+AKYGIFFSTKG RSAA E+A GDFDGDMYWVS N +L+  +   +PW R +S P 
Sbjct: 692  DVVGDAKYGIFFSTKGPRSAATEIANGDFDGDMYWVSINRKLVDSYTTSRPWIRMHSTPN 751

Query: 3385 SEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKKSL 3564
            +  K P EFS              A+S   +M+ AADSWL +MDRLL L D    +  SL
Sbjct: 752  AVSKKPSEFSADELEYELFRQFLEAKSKGANMSLAADSWLAFMDRLLTLRDDNVDDMHSL 811

Query: 3565 KDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSYRSISVLGQIYDMV 3744
            K KM+ L+DIYYDALDAPK+G KV +P  L+ + FPH+ME+G   SY S S+LGQIYD V
Sbjct: 812  KGKMLHLIDIYYDALDAPKSGKKVSIPHYLKANKFPHYMEKGNSCSYHSTSILGQIYDHV 871

Query: 3745 QAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDESKNDAANEV 3924
             ++  E +   EI K+ CF+V IP+  + +W+ RY+ Y+K+M +A+N   E +  + NEV
Sbjct: 872  DSYPDEDLCITEISKLPCFEVEIPQRCMTLWRGRYEEYKKDMTRAMNFDCELRITSCNEV 931

Query: 3925 IKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVEKCGFAWRVAGSALC 4101
            IKKYK LLY A + E++ + +E I+DEA+AIYHVTYD A + + +EKCGFAW+VAGSALC
Sbjct: 932  IKKYKMLLYGAVEFEQTVRKTEDIFDEALAIYHVTYDNARITYSIEKCGFAWKVAGSALC 991

Query: 4102 SLCAWKLAGPKEKPIVILPSVLRDLL 4179
             + A      KEK + ILPSVL+++L
Sbjct: 992  RIHAMY---RKEKDLPILPSVLQEIL 1014


>ref|XP_015077971.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            3 [Solanum pennellii]
          Length = 1018

 Score =  958 bits (2476), Expect = 0.0
 Identities = 528/1046 (50%), Positives = 700/1046 (66%), Gaps = 4/1046 (0%)
 Frame = +1

Query: 1054 LPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSGFVA 1230
            LP SVE  ++RIC E+ Q       R  L+ IGE+ SLE+L  I  S  PI+ S S F+ 
Sbjct: 20   LPYSVETMLERICKEQGQKPPCTGIRRRLSSIGEKGSLEMLKII--SRRPIKKSLSAFLV 77

Query: 1231 CLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPH--TLNGENLQSPLLSFP 1404
             ++ + YP        D  S  +SP    +   SS   + SP    + GE+     L   
Sbjct: 78   YMIDR-YP--------DCLSSSSSPFNSLLKRSSSPLLFPSPEGKRVQGESSSKSKLEMG 128

Query: 1405 VESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRETTEPMT 1584
              + +S      PQ ++ QLSF +E PE  S           RR SP             
Sbjct: 129  FLACAS------PQKVARQLSFCEE-PESNS-----------RRTSPY------------ 158

Query: 1585 ISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIWNSYG 1764
            +SQQLMILN+LE+RKLFLVLSYIG  KLE V++   AD+I R N+L M  FE++IWN++G
Sbjct: 159  VSQQLMILNELEFRKLFLVLSYIGCNKLEDVISPQIADDIVRKNNLSMTDFESEIWNAFG 218

Query: 1765 QKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVK 1944
            +      DRS++LDW+  KTH+YYCH+ ++G   FKGPYLN+ RTHLQR+LGDDN+LIVK
Sbjct: 219  KACYAVSDRSKYLDWNCRKTHIYYCHIKQNGYCTFKGPYLNTVRTHLQRALGDDNVLIVK 278

Query: 1945 FSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEKTYSAVKCYFVHIDS 2124
            F ED + A + I+EEGILVGLRRY                M K +   +++KCYFV  +S
Sbjct: 279  FVEDTSCA-NIILEEGILVGLRRYRFFVYKDDKERKKSPAMMKTKT--ASLKCYFVRFES 335

Query: 2125 VSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDLAAVIIE 2304
            +      E+Y+   KTIS+ARC FMH++ +S + KY AR SLILSKTIKL+ DL +V IE
Sbjct: 336  IGTCNDGESYVFSTKTISQARCKFMHVHMVSNMAKYAARLSLILSKTIKLQTDLDSVTIE 395

Query: 2305 IIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNSFEKHDQ 2484
             I+DI  +DE+G II DEDG+P +HTDGTG+ISEDLAM CPKDFS A+YI D ++E    
Sbjct: 396  RIEDILCRDENGCIIQDEDGEPRIHTDGTGFISEDLAMHCPKDFSKAEYIKDENYENFVD 455

Query: 2485 FVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIRPSMIKV 2664
             VD ++V  ++R + +RN+EPPLLMQCRLF +G AVKGT LVN+K+    I IRPSM+KV
Sbjct: 456  IVDLDDVNVERRASVSRNREPPLLMQCRLFFNGCAVKGTFLVNRKIGSRKIHIRPSMVKV 515

Query: 2665 VKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNALVDTRN 2844
              D T     TF+SLEIV ISHRP +   SK LI+LL+YGGV +E+F+ LL +AL +T+ 
Sbjct: 516  EIDPTISSIPTFDSLEIVAISHRPNKAYLSKNLISLLSYGGVHKEYFMELLGSALEETKQ 575

Query: 2845 VYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIP 3024
            V   +RAAL+VA N+  +D   +  RMISSG+PLNEP+L   LS L   E+TKL+ GK+P
Sbjct: 576  VRLRKRAALKVAINYREMDDECLTARMISSGIPLNEPHLHARLSRLAKIERTKLRGGKLP 635

Query: 3025 VSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEME 3204
            +++SFYLMGTADPTGVL ++EVCVILDNGQ+SG+VLVYRNPG+HFGDVH+M+A YV+E+ 
Sbjct: 636  INDSFYLMGTADPTGVLESNEVCVILDNGQVSGRVLVYRNPGLHFGDVHVMKARYVEELA 695

Query: 3205 EVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQ 3384
            +VVG+AKYGIFFSTKG R AA E+A GDFDGDMYWVS N +++  +   +PW R +S P+
Sbjct: 696  DVVGDAKYGIFFSTKGPRXAATEIANGDFDGDMYWVSINRKVVDSYTTSRPWIRMHSTPK 755

Query: 3385 SEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKKSL 3564
            +  K P EFS              A+S   +M+ AADSWL +MDRLL+L D    +  SL
Sbjct: 756  AVSKKPSEFSADELEYELFRQFLEAKSKGANMSLAADSWLAFMDRLLMLRDDNVDDMHSL 815

Query: 3565 KDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSYRSISVLGQIYDMV 3744
            K KM+ L+DIYYDALDAPK+G KV +P  L+ + FPH+ME+G   SY S S+LGQIYD V
Sbjct: 816  KGKMLHLIDIYYDALDAPKSGKKVSIPHYLKANKFPHYMEKGNSCSYHSTSILGQIYDHV 875

Query: 3745 QAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDESKNDAANEV 3924
             ++  E +   EI K+ CF+V IP+  + +W+ RY+ Y+K+M +A+N   E +  + NEV
Sbjct: 876  DSYPDEDLCITEISKLPCFEVEIPQRCMTLWRGRYEEYKKDMTRAMNLDCELRITSCNEV 935

Query: 3925 IKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVEKCGFAWRVAGSALC 4101
            IKKYK LLY A + E++ + +E I+DEA+AIYHVTYD A + + +EKCGFAW+VAGSALC
Sbjct: 936  IKKYKMLLYGAVEFEQTVRKTEDIFDEALAIYHVTYDNARIAYSIEKCGFAWKVAGSALC 995

Query: 4102 SLCAWKLAGPKEKPIVILPSVLRDLL 4179
             + A      KEK + ILPS+L+++L
Sbjct: 996  RIHAMY---RKEKDLPILPSLLQEIL 1018


>ref|XP_009760370.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Nicotiana sylvestris]
          Length = 1060

 Score =  956 bits (2470), Expect = 0.0
 Identities = 526/1059 (49%), Positives = 695/1059 (65%), Gaps = 14/1059 (1%)
 Frame = +1

Query: 1048 VRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIRSFSGFV 1227
            ++LP SVE  + +IC  ++Q  I    R +L  IGE+ SL++L+ I       ++ SGF+
Sbjct: 17   IKLPPSVEQMLNQICKNQRQNPIDEKVRRLLLSIGEEGSLDILSKISVCQIK-KTLSGFI 75

Query: 1228 ACLVKKEYP-----IVAATVLADYESPQASPQTQRIW--SPSSTSPYISPHTLNGENLQS 1386
              + KK Y          T ++  ES   SPQ QRI   SP+S+S  ++    NG   Q+
Sbjct: 76   VFMAKKYYQSETQQFYQQTPVSSAESFFQSPQIQRISLSSPNSSSSSVNFSPRNGPLFQA 135

Query: 1387 PLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQS--PLAGER 1560
             + +  +    S+   + PQ +S   S     PE+ ++          RR S  P+  E 
Sbjct: 136  TVHNNDIVGDGSDSPTSAPQMLSPPTS-----PERTNF----------RRDSHDPMPSEY 180

Query: 1561 RETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFE 1740
            R       IS+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    EI  M   PM  FE
Sbjct: 181  RNRAGIQGISKQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFE 240

Query: 1741 AKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLG 1920
            + IW  YG   C+   R Q+LDWDSG++H Y+CHV  DGSY FKGPYL + RTHLQ+SLG
Sbjct: 241  SYIWTKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLG 299

Query: 1921 DDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEKTYSAVK 2100
            D+NIL+V+F E+       IV+ GIL+GLRRY              N MDKEEK    VK
Sbjct: 300  DENILVVRFMEEAPRCPQEIVKNGILIGLRRYHFFVYKDDGKKK--NSMDKEEKI-DTVK 356

Query: 2101 CYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEV 2280
            CYFV ++S++PY  +  YILY K + +ARC FMH++ +S++ KY+ARFSLILS T+KL+V
Sbjct: 357  CYFVRMESLNPYE-NLTYILYDKIVHKARCRFMHVHMVSSMAKYMARFSLILSTTVKLQV 415

Query: 2281 DLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITD 2460
            DL +V I+ I+DI   D++G  ++DEDGKP++HTDGTGYISEDLA KCP+DF   KY  +
Sbjct: 416  DLNSVNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKY-KN 474

Query: 2461 NSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQ 2640
               E++   V+    + +    E ++ EPPLLMQCRLF++G AVKGTLLVN+KL   TIQ
Sbjct: 475  AKLERYSNGVEPGENSSEVGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRCTIQ 534

Query: 2641 IRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLM 2820
            IRPSMIKV  D        FNSLEIV  S +P     S+ LIALL YGGVP E+F ++L 
Sbjct: 535  IRPSMIKVEADPKLSRTRMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPAEYFFDILN 594

Query: 2821 NALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKT 3000
            N L +T+ +YS+   AL+VA+NH   D   +A  MI   VPL EPYL+ CLS+L   E+ 
Sbjct: 595  NTLEETQRLYSDEVTALKVAANHRDRDDASIATGMIMVVVPLCEPYLRCCLSSLAKEERN 654

Query: 3001 KLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIME 3180
             LK GK+P+S++FYLMGTADPT  LN  EVCVIL++GQISG+VLVYRNPG+HFGD+H + 
Sbjct: 655  GLKGGKLPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRLL 714

Query: 3181 AVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPW 3360
            AV VK + +VVGNAKYGIFFSTKG RSAA E+A GDFDGD YWVS+NP+LLKY+ A +PW
Sbjct: 715  AVPVKNLGDVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRPW 774

Query: 3361 TRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDH 3540
             R +S P++  + P++FS               R P++SMA A+ SWL  MDRLL+L  +
Sbjct: 775  CRIHSTPKALHREPKDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALMDRLLMLRKN 834

Query: 3541 CATEK---KSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSYRS 3711
              TE    K++K+K+ +L D+YYDA+DAPK+GNKV +P  L+VD FPH +E+     Y S
Sbjct: 835  NTTENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEK--KEEYIS 892

Query: 3712 ISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSG 3891
             SVLG+IYD V++FK+EA    EI K+  F+V IPE  + +W+ RY  YR EM +ALN+ 
Sbjct: 893  TSVLGEIYDRVKSFKAEAAVAVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNTS 952

Query: 3892 DESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMGHG-VEKCG 4068
             ESKND A+EV+KKYKQLLYEAPDMEES + +  I+++A+AIY VTYDYA   G V+KCG
Sbjct: 953  SESKNDLADEVVKKYKQLLYEAPDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKKCG 1012

Query: 4069 FAWRVAGSALCSLCAWKLAGP-KEKPIVILPSVLRDLLN 4182
            FAW+VAGSALC L A   A    +K + + PS+L  LLN
Sbjct: 1013 FAWKVAGSALCRLHAELHAKEHNQKIMAVSPSILHKLLN 1051


>ref|XP_009760371.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Nicotiana sylvestris]
          Length = 1058

 Score =  952 bits (2461), Expect = 0.0
 Identities = 527/1060 (49%), Positives = 692/1060 (65%), Gaps = 15/1060 (1%)
 Frame = +1

Query: 1048 VRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIRSFSGFV 1227
            ++LP SVE  + +IC  ++Q  I    R +L  IGE+ SL++L+ I       ++ SGF+
Sbjct: 17   IKLPPSVEQMLNQICKNQRQNPIDEKVRRLLLSIGEEGSLDILSKISVCQIK-KTLSGFI 75

Query: 1228 ACLVKKEYP-----IVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQSPL 1392
              + KK Y          T ++  ES   SPQ QRI   S +SP  S  ++N      PL
Sbjct: 76   VFMAKKYYQSETQQFYQQTPVSSAESFFQSPQIQRI---SLSSPNSSSSSVNFSPRNGPL 132

Query: 1393 LSFPVES---PSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQS--PLAGE 1557
                V +     S+   + PQ +S   S     PE+ ++          RR S  P+  E
Sbjct: 133  FQATVHNNVGDGSDSPTSAPQMLSPPTS-----PERTNF----------RRDSHDPMPSE 177

Query: 1558 RRETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVF 1737
             R       IS+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    EI  M   PM  F
Sbjct: 178  YRNRAGIQGISKQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHF 237

Query: 1738 EAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSL 1917
            E+ IW  YG   C+   R Q+LDWDSG++H Y+CHV  DGSY FKGPYL + RTHLQ+SL
Sbjct: 238  ESYIWTKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSL 296

Query: 1918 GDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEKTYSAV 2097
            GD+NIL+V+F E+       IV+ GIL+GLRRY              N MDKEEK    V
Sbjct: 297  GDENILVVRFMEEAPRCPQEIVKNGILIGLRRYHFFVYKDDGKKK--NSMDKEEKI-DTV 353

Query: 2098 KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLE 2277
            KCYFV ++S++PY  +  YILY K + +ARC FMH++ +S++ KY+ARFSLILS T+KL+
Sbjct: 354  KCYFVRMESLNPYE-NLTYILYDKIVHKARCRFMHVHMVSSMAKYMARFSLILSTTVKLQ 412

Query: 2278 VDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYIT 2457
            VDL +V I+ I+DI   D++G  ++DEDGKP++HTDGTGYISEDLA KCP+DF   KY  
Sbjct: 413  VDLNSVNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKY-K 471

Query: 2458 DNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTI 2637
            +   E++   V+    + +    E ++ EPPLLMQCRLF++G AVKGTLLVN+KL   TI
Sbjct: 472  NAKLERYSNGVEPGENSSEVGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRCTI 531

Query: 2638 QIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLL 2817
            QIRPSMIKV  D        FNSLEIV  S +P     S+ LIALL YGGVP E+F ++L
Sbjct: 532  QIRPSMIKVEADPKLSRTRMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPAEYFFDIL 591

Query: 2818 MNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEK 2997
             N L +T+ +YS+   AL+VA+NH   D   +A  MI   VPL EPYL+ CLS+L   E+
Sbjct: 592  NNTLEETQRLYSDEVTALKVAANHRDRDDASIATGMIMVVVPLCEPYLRCCLSSLAKEER 651

Query: 2998 TKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIM 3177
              LK GK+P+S++FYLMGTADPT  LN  EVCVIL++GQISG+VLVYRNPG+HFGD+H +
Sbjct: 652  NGLKGGKLPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRL 711

Query: 3178 EAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKP 3357
             AV VK + +VVGNAKYGIFFSTKG RSAA E+A GDFDGD YWVS+NP+LLKY+ A +P
Sbjct: 712  LAVPVKNLGDVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRP 771

Query: 3358 WTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGD 3537
            W R +S P++  + P++FS               R P++SMA A+ SWL  MDRLL+L  
Sbjct: 772  WCRIHSTPKALHREPKDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALMDRLLMLRK 831

Query: 3538 HCATEK---KSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSYR 3708
            +  TE    K++K+K+ +L D+YYDA+DAPK+GNKV +P  L+VD FPH +E+     Y 
Sbjct: 832  NNTTENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEK--KEEYI 889

Query: 3709 SISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNS 3888
            S SVLG+IYD V++FK+EA    EI K+  F+V IPE  + +W+ RY  YR EM +ALN+
Sbjct: 890  STSVLGEIYDRVKSFKAEAAVAVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNT 949

Query: 3889 GDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMGHG-VEKC 4065
              ESKND A+EV+KKYKQLLYEAPDMEES + +  I+++A+AIY VTYDYA   G V+KC
Sbjct: 950  SSESKNDLADEVVKKYKQLLYEAPDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKKC 1009

Query: 4066 GFAWRVAGSALCSLCAWKLAGP-KEKPIVILPSVLRDLLN 4182
            GFAW+VAGSALC L A   A    +K + + PS+L  LLN
Sbjct: 1010 GFAWKVAGSALCRLHAELHAKEHNQKIMAVSPSILHKLLN 1049


>ref|XP_009603361.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1063

 Score =  950 bits (2456), Expect = 0.0
 Identities = 521/1061 (49%), Positives = 692/1061 (65%), Gaps = 14/1061 (1%)
 Frame = +1

Query: 1042 QEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIRSFSG 1221
            + ++LP SVE  + +IC  ++Q       R +L  IGE+ SL++L+ I  S    ++ SG
Sbjct: 16   EAIKLPPSVEQMLNQICKNQRQNLPDKKVRRLLLSIGEEGSLDILSEISVSQIK-KTLSG 74

Query: 1222 FVACLVKKEYPIVAA-------TVLADYESPQASPQTQRIW--SPSSTSPYISPHTLNGE 1374
            F+  + KK Y            T ++  ES   SPQ QRI   SP+S+S  I+     G 
Sbjct: 75   FIVFMAKKYYQSETQQFYQQQPTQVSSAESFFQSPQIQRISLSSPNSSSSSINFSPRIGP 134

Query: 1375 NLQSPLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAG 1554
              Q+ + +  +    S+   + PQ +S  +S E    ++  Y              P   
Sbjct: 135  LFQATVHNNDIVGDGSDSPTSAPQMLSPPMSPERTIFQRDLY-------------DPTPS 181

Query: 1555 ERRETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKV 1734
            E R       IS+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    +I  M   PM  
Sbjct: 182  EFRNRAGIQGISEQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGDILDMTCQPMAH 241

Query: 1735 FEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRS 1914
            FE+ IW  YG   C+   R Q+LDWDSG++H Y+CHV  DGSY FKGPYL + RTHLQ+S
Sbjct: 242  FESCIWTKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQS 300

Query: 1915 LGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEKTYSA 2094
            LGD+NIL+V+F E+       IV+ GILVGLRRY              N MDKEEK    
Sbjct: 301  LGDENILVVRFMEEAPRCPQEIVKNGILVGLRRYRFFVYKDDGKKK--NSMDKEEKI-DT 357

Query: 2095 VKCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKL 2274
            VKCYFV ++S++PY  +  YIL+ K + EARC FMH++ + ++ KY+ARFSLILS T+KL
Sbjct: 358  VKCYFVRMESLNPYE-NLTYILHNKIVHEARCRFMHVHMVPSMAKYMARFSLILSTTVKL 416

Query: 2275 EVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYI 2454
            +VDL +V I+ I+DI   D++G  ++DEDGKP++HTDGTGYISEDLA KCP+DF   KY 
Sbjct: 417  QVDLNSVNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKY- 475

Query: 2455 TDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGT 2634
             +   E++   V+    + +    E ++ EPPLLMQCRLF++G AVKGTLLVN+KL  GT
Sbjct: 476  KNAKLERYPNGVELGESSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRGT 535

Query: 2635 IQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNL 2814
            IQIRPSMIKV  D        FNSLEIV  S +P     S+ LIALL YGGVP E+F ++
Sbjct: 536  IQIRPSMIKVEADPKLSRARMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPGEYFFDI 595

Query: 2815 LMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGE 2994
            L N L +T+ +YS+   AL+VA+NH   D   +A  MI +GVPL EPYL+ CLS+L   E
Sbjct: 596  LNNTLEETQRLYSDEVTALKVAANHRDRDDASIATGMIMAGVPLCEPYLRCCLSSLAKEE 655

Query: 2995 KTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHI 3174
            +  LK GK+P+S++FYLMGTADPT  LN  EVCVIL++GQISG+VLVYRNPG+HFGD+H 
Sbjct: 656  RNGLKGGKLPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHR 715

Query: 3175 MEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHK 3354
            + AV VK + +VVGNAKYGI FSTKG RSAA E+A GDFDGD YWVS+NP+LLKY++A +
Sbjct: 716  LLAVPVKNLGDVVGNAKYGILFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYRASR 775

Query: 3355 PWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILG 3534
            PW+R +S P++  + P +FS               R P++SMA A+ SWL  +DRLLIL 
Sbjct: 776  PWSRIHSTPKTLHREPNDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALVDRLLILR 835

Query: 3535 DHCATEK---KSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSY 3705
             +  TE    K++K+K+ +L D+YYDA+DAPK+GNKV +P  L+VD FPH +E+   + Y
Sbjct: 836  KNYTTENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEK--KAEY 893

Query: 3706 RSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALN 3885
             S SVLG+IYD V++FK+E     EI K+  F+V IPE  + +W+ RY  YR EM +ALN
Sbjct: 894  ISTSVLGEIYDRVKSFKAEEAAAVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALN 953

Query: 3886 SGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMGHG-VEK 4062
            +  ESKND A+EV+KKYKQLLYEA DMEES + +  I+++A+AIY VTYDYA   G V+K
Sbjct: 954  TSSESKNDLADEVVKKYKQLLYEATDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKK 1013

Query: 4063 CGFAWRVAGSALCSLCAWKLAGP-KEKPIVILPSVLRDLLN 4182
            CGFAW+VAGSALC L A   A    +K + + PS+L  LLN
Sbjct: 1014 CGFAWKVAGSALCRLHAELHAKEHNQKVMAVSPSILHKLLN 1054


>ref|XP_009603362.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1061

 Score =  949 bits (2453), Expect = 0.0
 Identities = 522/1062 (49%), Positives = 690/1062 (64%), Gaps = 15/1062 (1%)
 Frame = +1

Query: 1042 QEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIRSFSG 1221
            + ++LP SVE  + +IC  ++Q       R +L  IGE+ SL++L+ I  S    ++ SG
Sbjct: 16   EAIKLPPSVEQMLNQICKNQRQNLPDKKVRRLLLSIGEEGSLDILSEISVSQIK-KTLSG 74

Query: 1222 FVACLVKKEYPIVAA-------TVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENL 1380
            F+  + KK Y            T ++  ES   SPQ QRI   S +SP  S  ++N    
Sbjct: 75   FIVFMAKKYYQSETQQFYQQQPTQVSSAESFFQSPQIQRI---SLSSPNSSSSSINFSPR 131

Query: 1381 QSPLLSFPVES---PSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLA 1551
              PL    V +     S+   + PQ +S  +S E    ++  Y              P  
Sbjct: 132  IGPLFQATVHNNVGDGSDSPTSAPQMLSPPMSPERTIFQRDLY-------------DPTP 178

Query: 1552 GERRETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMK 1731
             E R       IS+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    +I  M   PM 
Sbjct: 179  SEFRNRAGIQGISEQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGDILDMTCQPMA 238

Query: 1732 VFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQR 1911
             FE+ IW  YG   C+   R Q+LDWDSG++H Y+CHV  DGSY FKGPYL + RTHLQ+
Sbjct: 239  HFESCIWTKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQ 297

Query: 1912 SLGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEKTYS 2091
            SLGD+NIL+V+F E+       IV+ GILVGLRRY              N MDKEEK   
Sbjct: 298  SLGDENILVVRFMEEAPRCPQEIVKNGILVGLRRYRFFVYKDDGKKK--NSMDKEEKI-D 354

Query: 2092 AVKCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIK 2271
             VKCYFV ++S++PY  +  YIL+ K + EARC FMH++ + ++ KY+ARFSLILS T+K
Sbjct: 355  TVKCYFVRMESLNPYE-NLTYILHNKIVHEARCRFMHVHMVPSMAKYMARFSLILSTTVK 413

Query: 2272 LEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKY 2451
            L+VDL +V I+ I+DI   D++G  ++DEDGKP++HTDGTGYISEDLA KCP+DF   KY
Sbjct: 414  LQVDLNSVNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKY 473

Query: 2452 ITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPG 2631
              +   E++   V+    + +    E ++ EPPLLMQCRLF++G AVKGTLLVN+KL  G
Sbjct: 474  -KNAKLERYPNGVELGESSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRG 532

Query: 2632 TIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLN 2811
            TIQIRPSMIKV  D        FNSLEIV  S +P     S+ LIALL YGGVP E+F +
Sbjct: 533  TIQIRPSMIKVEADPKLSRARMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPGEYFFD 592

Query: 2812 LLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESG 2991
            +L N L +T+ +YS+   AL+VA+NH   D   +A  MI +GVPL EPYL+ CLS+L   
Sbjct: 593  ILNNTLEETQRLYSDEVTALKVAANHRDRDDASIATGMIMAGVPLCEPYLRCCLSSLAKE 652

Query: 2992 EKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVH 3171
            E+  LK GK+P+S++FYLMGTADPT  LN  EVCVIL++GQISG+VLVYRNPG+HFGD+H
Sbjct: 653  ERNGLKGGKLPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIH 712

Query: 3172 IMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAH 3351
             + AV VK + +VVGNAKYGI FSTKG RSAA E+A GDFDGD YWVS+NP+LLKY++A 
Sbjct: 713  RLLAVPVKNLGDVVGNAKYGILFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYRAS 772

Query: 3352 KPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLIL 3531
            +PW+R +S P++  + P +FS               R P++SMA A+ SWL  +DRLLIL
Sbjct: 773  RPWSRIHSTPKTLHREPNDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALVDRLLIL 832

Query: 3532 GDHCATEK---KSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSS 3702
              +  TE    K++K+K+ +L D+YYDA+DAPK+GNKV +P  L+VD FPH +E+   + 
Sbjct: 833  RKNYTTENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEK--KAE 890

Query: 3703 YRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKAL 3882
            Y S SVLG+IYD V++FK+E     EI K+  F+V IPE  + +W+ RY  YR EM +AL
Sbjct: 891  YISTSVLGEIYDRVKSFKAEEAAAVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQAL 950

Query: 3883 NSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMGHG-VE 4059
            N+  ESKND A+EV+KKYKQLLYEA DMEES + +  I+++A+AIY VTYDYA   G V+
Sbjct: 951  NTSSESKNDLADEVVKKYKQLLYEATDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVK 1010

Query: 4060 KCGFAWRVAGSALCSLCAWKLAGP-KEKPIVILPSVLRDLLN 4182
            KCGFAW+VAGSALC L A   A    +K + + PS+L  LLN
Sbjct: 1011 KCGFAWKVAGSALCRLHAELHAKEHNQKVMAVSPSILHKLLN 1052


>ref|XP_015059191.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Solanum
            pennellii]
          Length = 1054

 Score =  934 bits (2414), Expect = 0.0
 Identities = 520/1058 (49%), Positives = 685/1058 (64%), Gaps = 11/1058 (1%)
 Frame = +1

Query: 1042 QEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFS 1218
            +EV LP SV+  I +IC +++Q +  +  R +L  IGE+ SL +L  I  S   I+ + S
Sbjct: 10   EEVELPPSVQQMINQICKKERQNSPDDTVRRLLVAIGEERSLYILNEI--SKCQIKKTLS 67

Query: 1219 GFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQSPLLS 1398
            GF+  + KK Y              Q  P  +  +     SP I  ++L+ +N     ++
Sbjct: 68   GFIVFMAKKYYQSETQQFYQKQNYEQPVPSAESFYH----SPQIRRNSLSSQNSSCSSVN 123

Query: 1399 FPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSP---SVRR--QSPLAGERR 1563
            F  ++     DR      S       ++P     +     SP   S +R    P   + R
Sbjct: 124  FSPKNRPIFQDRDIVGEAS-------DSPTSAPRIPSPPMSPVTTSFQRCHYDPSPSKFR 176

Query: 1564 ETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEA 1743
            +      IS+QL+ LNKLE+RK FL+L+YIGR+K+E V+TL    +I  M   PM  FE+
Sbjct: 177  DRASTRGISEQLLALNKLEFRKFFLILNYIGRRKVEDVITLHDIGDILDMIYQPMSHFES 236

Query: 1744 KIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGD 1923
             IWN YG   C+   R Q+LDWDSG+THLY+CHV  D SY FKGPYL + RTHLQ SLGD
Sbjct: 237  YIWNKYGH-LCEHNKRVQYLDWDSGRTHLYHCHVHSDRSYTFKGPYLKAERTHLQHSLGD 295

Query: 1924 DNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEKTYSAVKC 2103
            +N+LIVKF ++     + IV+ GILVGLRRY              +  DKEEK  S VKC
Sbjct: 296  ENVLIVKFEQNTPGCPEEIVQNGILVGLRRYRFFVYKDDGKKR--SSKDKEEKIDS-VKC 352

Query: 2104 YFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVD 2283
            YFV ++S++PY  +E YIL+ K + EARC FMH++ +S++ KY+ARFSLILS T+KL+VD
Sbjct: 353  YFVRMESLNPYE-NETYILHDKMVHEARCNFMHVHMVSSMAKYMARFSLILSTTVKLQVD 411

Query: 2284 LAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDN 2463
            L +V I+ I+DI   D+ G II+DEDGKP++HTDGTGYISEDLA KCP+DF   K+   N
Sbjct: 412  LNSVNIDRIEDIYCHDKSGRIIYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKHKCAN 471

Query: 2464 SFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQI 2643
              E++   V     + +    E ++ EPPLLMQCRLF++G AVKGTLLVNKKL   TIQI
Sbjct: 472  -LERYTNGVKLGENSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNKKLPRRTIQI 530

Query: 2644 RPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMN 2823
            RPSMIKV  D      + FNSLEI   S +P     S+ LIALL YGGVP E+F ++L N
Sbjct: 531  RPSMIKVEADPRLSRAQMFNSLEINTPSLKPRNTYLSRTLIALLTYGGVPVEYFYDILNN 590

Query: 2824 ALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTK 3003
             L +T+ +YS+   AL+VA NH   D    A  MI +GVPL EPYL  CLS+L   E+  
Sbjct: 591  TLEETQRLYSDEVTALKVAVNHRDRDDASTATSMIMAGVPLTEPYLWCCLSSLAKEERNG 650

Query: 3004 LKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEA 3183
            LK G++P++++FYLMGTADPT  LN  EVCVIL++GQI G+VLVYRNPG+HFGD+H + A
Sbjct: 651  LKGGRLPIADTFYLMGTADPTDTLNPHEVCVILEHGQIFGEVLVYRNPGLHFGDIHKLLA 710

Query: 3184 VYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWT 3363
            V VK + ++VGNAKYGIFFSTKG RSAA E+A GDFDGD YWVS+NP+LLKYF A +PW+
Sbjct: 711  VPVKNLGDIVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYFTASRPWS 770

Query: 3364 RSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHC 3543
            R +S P++  + P  FS               R P++SMA A+ +W   MDRLLILG + 
Sbjct: 771  RIHSTPKALHREPNNFSAEEREHELFQTFLETRMPNYSMADASANWYALMDRLLILGKNN 830

Query: 3544 ATEK---KSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSYRSI 3714
              E    KS+K+K+ +L+D+YYDA+DAPK+GNKV +P  L+VD FPH +++    SY S 
Sbjct: 831  TIENEETKSVKEKLFELIDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLQK--KESYHST 888

Query: 3715 SVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGD 3894
            SVLG+IYD V+ FK+E     EI K+  F+V IPE  + +W+ RY  YR EM +ALN+  
Sbjct: 889  SVLGEIYDRVEKFKAEEPVAVEIKKLPAFEVGIPETCLRLWEERYRKYRFEMKEALNTSS 948

Query: 3895 ESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMGHG-VEKCGF 4071
            ESKND A++VIKKYKQLLYEAPDMEES + +  IY++A+AIY VTYDYA   G V KCGF
Sbjct: 949  ESKNDLADQVIKKYKQLLYEAPDMEESIRSTTDIYNDALAIYRVTYDYAKAIGDVRKCGF 1008

Query: 4072 AWRVAGSALCSLCAWKLAGP-KEKPIVILPSVLRDLLN 4182
            AW+VAG+ALC L A   A    +K + + PS+L +LLN
Sbjct: 1009 AWKVAGAALCRLHAELHAKEHNQKVMAMSPSILHNLLN 1046


>emb|CDP03268.1| unnamed protein product [Coffea canephora]
          Length = 875

 Score =  922 bits (2382), Expect = 0.0
 Identities = 482/897 (53%), Positives = 640/897 (71%), Gaps = 9/897 (1%)
 Frame = +1

Query: 1516 KSPSVRRQSPLAGE----RRETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVT 1683
            K+  V RQ   +GE     ++ T  +   Q+ ++ +KLEYRKLFL+ SYIGR+K E VV+
Sbjct: 3    KASKVTRQLQFSGEPECNEKKITPEVFSYQRTLLTSKLEYRKLFLIYSYIGRRKFEDVVS 62

Query: 1684 LDGADEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSY 1863
             D AD+I  M DLPM  FE++IW++YG+++    DR Q  +WD+GKTHLYYC+V  DGS 
Sbjct: 63   DDDADQILEMKDLPMGNFESRIWDAYGKRYVPA-DRRQSTEWDTGKTHLYYCYVYADGSC 121

Query: 1864 YFKGPYLNSSRTHLQRSLGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXX 2043
             FKGP L+++ THLQR+LGDDNILIVKF+EDG    D I++EGILVGLR Y         
Sbjct: 122  SFKGPCLDTTSTHLQRTLGDDNILIVKFAEDGRSCIDRILKEGILVGLRCYQFFGTKKQ- 180

Query: 2044 XXXXXNQMDKEEKTYS-AVKCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLST 2220
                  +M+K++ + S AV+CYFV+ DS++  G  E+Y L    +++ARC FMH++ +S+
Sbjct: 181  -----KEMEKDKTSLSPAVRCYFVNYDSIAARGNSESYSLCPSNLNKARCHFMHVHMVSS 235

Query: 2221 IEKYIARFSLILSKTIKLEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYI 2400
            + KY+ARFSLILSKTIKL VDL++++IE I+DIP +DE+G  I DEDG+ ++ TDGTG+I
Sbjct: 236  LAKYMARFSLILSKTIKLPVDLSSIVIESIEDIPCRDENGDEILDEDGEVLVLTDGTGFI 295

Query: 2401 SEDLAMKCPKDFSAAKYITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHD 2580
            SEDLA+KCP++F +AK++ DN FE      + E         E  +   PLLMQCRLF  
Sbjct: 296  SEDLALKCPQNFCSAKFLKDNDFEVTCYAYNEE--------FECLDHPNPLLMQCRLFSR 347

Query: 2581 GYAVKGTLLVNKKLEPGTIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKY 2760
            G AVKGTLLVN+K       IR SM+KV +D   P+  TF+SLEIV +SH+P R   SK 
Sbjct: 348  GLAVKGTLLVNRK-------IRSSMVKVKRDIRCPVAPTFDSLEIVAVSHKPRRCQLSKN 400

Query: 2761 LIALLNYGGVPQEFFLNLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGV 2940
            LIALL+YGGVP+ FFL++L   L +T+ +++N  AAL+V+  +  +D G+   RMI +GV
Sbjct: 401  LIALLSYGGVPRNFFLDILRTVLEETQALFTNLHAALKVSIRNGDMDDGWTTARMILAGV 460

Query: 2941 PLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQIS 3120
            PL+EP+LQ  L+ L + E+  LK+GK+P+SESFY+MGTADPTG+L  +EVCVIL+NGQIS
Sbjct: 461  PLSEPHLQDRLAKLANFERKSLKEGKLPISESFYVMGTADPTGLLKANEVCVILENGQIS 520

Query: 3121 GKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGD 3300
            GKVLVYRNPG+HFGDVH++EAVYVKE+E+V+GNAK+GIFFSTKG RS A E+A GDFDGD
Sbjct: 521  GKVLVYRNPGLHFGDVHVLEAVYVKELEDVIGNAKFGIFFSTKGQRSVANEIANGDFDGD 580

Query: 3301 MYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSM 3480
            MYWVSRNP+LLKYF+A +PWTR  S P +E K P +FS               R  SF+M
Sbjct: 581  MYWVSRNPQLLKYFRASEPWTRVYSSPPAENKKPSDFSAEALEYELFRLSLEKRKQSFNM 640

Query: 3481 ATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRV 3660
            A AA SWL +MDRLL+L D  A +   L+ ++++LVDIYYDALDAPK+G KV VP +L  
Sbjct: 641  AVAAHSWLAFMDRLLVLRDENAGDTDGLRQQILKLVDIYYDALDAPKSGKKVNVPSDLIA 700

Query: 3661 DTFPHHMERGLDSSYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWK 3840
             ++PH+M +G  +SY S S+LG I+D  + F+SE     EIWK+ CF+  IPE Y+ MW 
Sbjct: 701  KSYPHYMGKG--NSYHSTSILGDIFDQTEQFQSERRSIGEIWKLPCFNSRIPEEYLSMWM 758

Query: 3841 ARYDNYRKEMAKALN---SGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAI 4011
            ARYD+YR EM  AL    + D+ KN AA+ VIKKYK+LLYEA +++ES K  E I +EA+
Sbjct: 759  ARYDDYRYEMRDALEQNPADDDLKNKAADRVIKKYKELLYEAAELQESKKKMEEINNEAL 818

Query: 4012 AIYHVTYDYAMGHG-VEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 4179
            AIYHV+YD+A+G G + KC FAWRVAGSALC+L A       E P++++PSVLR+ L
Sbjct: 819  AIYHVSYDHAIGRGCISKCSFAWRVAGSALCNLHA-SNTSTNEYPMLVVPSVLRNAL 874


>ref|XP_010313737.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Solanum
            lycopersicum]
          Length = 1054

 Score =  928 bits (2398), Expect = 0.0
 Identities = 522/1069 (48%), Positives = 689/1069 (64%), Gaps = 22/1069 (2%)
 Frame = +1

Query: 1042 QEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFS 1218
            +EV LP SV+  I +IC +++Q +  +  R +L  IGE+ SL +L  I  S   I+ + S
Sbjct: 10   EEVELPSSVQQMINQICKKERQNSPDDTVRRLLVAIGEERSLYILNEI--SKCQIKKTLS 67

Query: 1219 GFVACLVKKEY---------------PIVAATVLADYESPQASPQTQRIWSPSSTSPYIS 1353
            GF+  + KK Y               P+++A      ES   SPQ +R    S +SP  S
Sbjct: 68   GFIVFMAKKYYQSETQQFYQKQNHEQPVLSA------ESFYHSPQIRR---NSLSSPNSS 118

Query: 1354 PHTLNGENLQSPLLSF-PVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSV 1530
              ++N      P+     +   +S+   +GP+  S  LS    + +K  Y          
Sbjct: 119  CSSVNFSPRNRPIFQDRDIVGDTSDSPTSGPRIPSPPLSPVTTSFQKCHY---------- 168

Query: 1531 RRQSPLAGERRETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYR 1710
                P   + R+      IS+QL+ LNKLE+RK FL+L+YIGR+K+E V+TL    +I  
Sbjct: 169  ---DPSPSKFRDRASTRGISEQLLALNKLEFRKFFLILNYIGRRKVEDVITLHDVGDILD 225

Query: 1711 MNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNS 1890
            M   PM  FE+ IWN YG   C+   R Q+LDWDSG+THLY+CHV  D SY FKGPYL +
Sbjct: 226  MIYQPMSHFESYIWNKYGH-LCEHNKRVQYLDWDSGRTHLYHCHVHSDRSYTFKGPYLKA 284

Query: 1891 SRTHLQRSLGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMD 2070
             RTHLQ SLGD+N+LIVKF ++     + IV+ GILVGLRRY                 D
Sbjct: 285  ERTHLQHSLGDENVLIVKFEQNTPGCPEEIVQNGILVGLRRYRFFVYKDDGKKRRLK--D 342

Query: 2071 KEEKTYSAVKCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSL 2250
            KEEK  S VKCYFV ++S++PY  +E YIL+ K + EARC FMH++ +S++ KY+ARFSL
Sbjct: 343  KEEKIDS-VKCYFVRMESLNPYE-NETYILHDKMVHEARCNFMHVHMVSSMAKYMARFSL 400

Query: 2251 ILSKTIKLEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPK 2430
            ILS T+KL+VDL +V I+ I+DI   D+ G II+DEDGKP++HTDGTGYISEDLA KCP+
Sbjct: 401  ILSTTVKLQVDLNSVNIDRIEDIYCHDKSGRIIYDEDGKPLIHTDGTGYISEDLARKCPQ 460

Query: 2431 DFSAAKYITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLV 2610
            DF   K+   N   ++   V     + +    E ++ EPPLLMQCRLF++G AVKGTLLV
Sbjct: 461  DFFNVKHKCAN-LVRYANGVKLGENSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLV 519

Query: 2611 NKKLEPGTIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGV 2790
            N+KL   TIQIRPSMIKV  D        FNSLEI   S +P     S+ LIALL YGGV
Sbjct: 520  NRKLPQRTIQIRPSMIKVEADPRLSRAHMFNSLEINTPSLKPRNTYLSRTLIALLTYGGV 579

Query: 2791 PQEFFLNLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLC 2970
            P E+F ++L N L +T+ +YS+   AL+VA NH   D    A  MI +GVPL EPYL  C
Sbjct: 580  PVEYFYDILNNTLEETQRLYSDEVTALKVAVNHRDRDDASTATSMIMAGVPLTEPYLWCC 639

Query: 2971 LSNLESGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPG 3150
            LS+L   E+  LK G++P++++FYLMGTADPT  LN  EVCVIL++GQI G+VL+YRNPG
Sbjct: 640  LSSLAKEERNGLKGGRLPIADTFYLMGTADPTDTLNRHEVCVILEHGQIFGEVLIYRNPG 699

Query: 3151 MHFGDVHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPEL 3330
            +HFGD+H + AV VK + ++VGNAKYGIFFSTKG RSAA E+A GDFDGD YW+S+NP+L
Sbjct: 700  LHFGDIHRLLAVPVKNLGDIVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWISQNPQL 759

Query: 3331 LKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTY 3510
            LKYF A +PW+R +S P++  + P  FS               R P++SMA A+ +W   
Sbjct: 760  LKYFTASRPWSRIHSTPKALHREPNNFSAEEREHELFQTFLETRMPNYSMADASANWYAL 819

Query: 3511 MDRLLILGDHCATEK---KSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHM 3681
            MDRLLILG +   E    KS+K+K+ +L+D+YYDA+DAPK+GNKV +P  L+VD FPH +
Sbjct: 820  MDRLLILGKNNTIENEETKSVKEKLFELIDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFL 879

Query: 3682 ERGLDSSYRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYR 3861
            ++    SY S SVLG+IYD V+ FK+E     EI K+  F+V IPE  + +W+ RY  YR
Sbjct: 880  QK--KESYHSTSVLGEIYDRVEKFKAEEPVAVEIKKLPAFEVGIPETCLRLWEERYRKYR 937

Query: 3862 KEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA 4041
             EM +ALN+  ESKND A++VIKKYKQLLYEAPDMEES + +  IY++A+AIY VTYDYA
Sbjct: 938  FEMKEALNTSSESKNDLADQVIKKYKQLLYEAPDMEESIRSTTDIYNDALAIYRVTYDYA 997

Query: 4042 MGHG-VEKCGFAWRVAGSALCSLCAWKLAGP-KEKPIVILPSVLRDLLN 4182
               G V KCGFAW+VAG+ALC L A   A    +K + + PS+L +LLN
Sbjct: 998  KAIGDVRKCGFAWKVAGTALCRLHAELHAKEHNQKVMAMSPSILHNLLN 1046


>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Solanum
            tuberosum]
          Length = 1110

 Score =  927 bits (2396), Expect = 0.0
 Identities = 530/1104 (48%), Positives = 699/1104 (63%), Gaps = 56/1104 (5%)
 Frame = +1

Query: 1039 HQEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SF 1215
            ++EV LP SV+  I +IC +++Q +  +  R +L  IGE+ SL +L  I  S   I+ + 
Sbjct: 9    NEEVELPHSVQQMINQICKKERQNSPDDKVRRLLVAIGEERSLCILREI--SKCQIKKTL 66

Query: 1216 SGFVACLVKKEYPIVAATVLA--DYESPQAS-------PQTQR--IWSPSSTS------- 1341
            SGF+  + KK Y           +YE P  S       PQ +R  + SP+S+        
Sbjct: 67   SGFIVFMAKKYYQSETQQFYQKQNYEEPVPSAESFYHSPQIRRSSLSSPNSSCSSVNFSP 126

Query: 1342 ---PYISPHTLNGENLQSPLLSFPVESP------------------SSNLDRTGPQNISC 1458
               P    + + G+   SP  +  + SP                  S+  DR   + IS 
Sbjct: 127  RNRPIFQDNDIVGDASDSPTSAPRIPSPPMSPVTTSFQRDHYDPRPSTFRDRASTRGISE 186

Query: 1459 QL------SFEDETPEKRSYVIQEKKSP---SVRRQ--SPLAGERRETTEPMTISQQLMI 1605
            QL          ++P     +     SP   S +R    P     R+      IS+QL+ 
Sbjct: 187  QLLALNIVGDASDSPTSAPRIPSPPMSPVTTSFQRDHYDPRPSTFRDRASTRGISEQLLA 246

Query: 1606 LNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIWNSYGQKFCDEW 1785
            L+KLE+RK FL+L+YIGR+K+E V+ L    +I  M   PM  FE+ IWN YG   C+  
Sbjct: 247  LSKLEFRKFFLILNYIGRRKVEDVIMLHDVGDILDMIYQPMSHFESYIWNKYGH-LCEHN 305

Query: 1786 DRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVKFSEDGAY 1965
             R Q+LDWDSG+THLY+CHV  DGSY FKGPYL + RTHLQ+SLGD+N+LIVKF ++   
Sbjct: 306  KRVQYLDWDSGRTHLYHCHVHSDGSYTFKGPYLKAERTHLQQSLGDENVLIVKFEQNTPG 365

Query: 1966 ATDNIVEEGILVGLRRYXXXXXXXXXXXXXXNQMDKEEKTYSAVKCYFVHIDSVSPYGCD 2145
              + IV+ GILVGLRRY              +  DKEEK  S VKCYFV ++S++PY   
Sbjct: 366  CPEEIVQNGILVGLRRYRFFVYKDDGKKR--SSKDKEEKIDS-VKCYFVRMESLNPYE-K 421

Query: 2146 ENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDLAAVIIEIIKDIPL 2325
            E YIL  K + EARC FMH++ +S++ KY+ARFSL LS T+KL+VDL +V I+ I+DI  
Sbjct: 422  ETYILRDKMVHEARCNFMHVHMVSSMAKYMARFSLTLSTTVKLQVDLNSVNIDRIEDICC 481

Query: 2326 KDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNSFEKHDQFVDFENV 2505
             D+ G II+DEDGKP++HTDGTGYISEDLA KCP+DF   K+   N  E++   V     
Sbjct: 482  HDKSGRIIYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKHRCAN-LERYTNGVKLGEN 540

Query: 2506 AFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIRPSMIKVVKDRTSP 2685
            + +    E ++ EPPLLMQCRLF++G AVKGTLLVN+KL   TIQIRPSMIKV  D    
Sbjct: 541  SSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRRTIQIRPSMIKVEADPRLS 600

Query: 2686 MKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNALVDTRNVYSNRRA 2865
              + FNSLEI   S +P     S+ LIALL YGGVP E+F ++L N L +T+ +YS+   
Sbjct: 601  RAQMFNSLEINTPSLKPRNTYLSRTLIALLTYGGVPVEYFYDILNNTLEETQRLYSDEVT 660

Query: 2866 ALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYL 3045
            AL+VA NH   D    A  MI +GVPL EPYL  CLS+L   E+  LK G++P++++FYL
Sbjct: 661  ALKVAVNHRDRDDASTATSMIMAGVPLTEPYLWCCLSSLAKEERNGLKGGRLPIADTFYL 720

Query: 3046 MGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAK 3225
            MGTADPT  LN  EVCVIL++GQI G+VLVYRNPG+HFGD+H + AV VK + ++VGNAK
Sbjct: 721  MGTADPTDTLNPHEVCVILEHGQIFGEVLVYRNPGLHFGDIHRLLAVPVKNLGDIVGNAK 780

Query: 3226 YGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQ 3405
            YGIFFSTKG RSAA E+A GDFDGD YWVS+NP+LLKYF A +PW+R +S P++  + P 
Sbjct: 781  YGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYFTASRPWSRIHSTPKTLHREPN 840

Query: 3406 EFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEK---KSLKDKM 3576
             FS               R P++SMA A+ +W   MDRLLILG +  TE    KS+K+K+
Sbjct: 841  NFSAEEREHDLFQTFLETRMPNYSMADASANWYALMDRLLILGKNNTTENEEIKSVKEKL 900

Query: 3577 IQLVDIYYDALDAPKTGNKVPVPIELRVDTFPHHMERGLDSSYRSISVLGQIYDMVQAFK 3756
             +L+D+YYDA+DAPK+GNKV +P  L+VD FPH +++    SY S SVLG+IYD V+ FK
Sbjct: 901  FELIDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLQK--KESYHSTSVLGEIYDRVEKFK 958

Query: 3757 SEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDESKNDAANEVIKKY 3936
            +E     EI K+S F+V IP+  + +W+ RY NYR EM +ALN+  ESKND A++VIKKY
Sbjct: 959  AEEPAAVEIKKLSAFEVGIPDTCLRLWEERYRNYRFEMKEALNTSSESKNDLADQVIKKY 1018

Query: 3937 KQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMGHG-VEKCGFAWRVAGSALCSLCA 4113
            KQLLYEAPDMEES + +  +Y++A+AIY VTYDYA   G V KCGFAW+VAG+ALC L A
Sbjct: 1019 KQLLYEAPDMEESIRSTTDMYNDALAIYCVTYDYAKAIGDVRKCGFAWKVAGAALCKLHA 1078

Query: 4114 WKLAGP-KEKPIVILPSVLRDLLN 4182
               A    +K + + PS+L  LLN
Sbjct: 1079 ELHAKEHNQKVMAMSPSILHKLLN 1102