BLASTX nr result
ID: Rehmannia27_contig00013557
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00013557
(1151 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III s... 546 0.0
ref|XP_012855127.1| PREDICTED: DNA-directed RNA polymerase III s... 457 e-154
emb|CDP02819.1| unnamed protein product [Coffea canephora] 451 e-151
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 443 e-148
gb|EYU44675.1| hypothetical protein MIMGU_mgv1a004477mg [Erythra... 415 e-139
ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III s... 376 e-122
ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III s... 370 e-119
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 367 e-118
ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III s... 362 e-116
ref|XP_007046992.1| Transcription regulators,zinc ion binding, p... 356 e-115
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ... 356 e-114
ref|XP_007046993.1| Transcription regulators,zinc ion binding, p... 356 e-113
ref|XP_009794022.1| PREDICTED: DNA-directed RNA polymerase III s... 349 e-111
ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III s... 342 e-110
ref|XP_009621596.1| PREDICTED: DNA-directed RNA polymerase III s... 342 e-110
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata] 343 e-109
ref|XP_009621595.1| PREDICTED: DNA-directed RNA polymerase III s... 342 e-109
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s... 342 e-109
ref|XP_009608223.1| PREDICTED: DNA-directed RNA polymerase III s... 342 e-108
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s... 341 e-108
>ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Sesamum
indicum]
Length = 683
Score = 546 bits (1407), Expect = 0.0
Identities = 278/399 (69%), Positives = 318/399 (79%), Gaps = 16/399 (4%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVG 181
LD+ C+EVRVKP SAE+E+DLAVDVDSKNYDSGADPRVQMKKQILT+ WKPPH SG+AVG
Sbjct: 141 LDDRCDEVRVKPASAELEVDLAVDVDSKNYDSGADPRVQMKKQILTSSWKPPHASGYAVG 200
Query: 182 VLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQEXXXXXXXXX 361
+LTGNKL+LNP+H VVQLRPS+QHL++++SKRKT+ NV D VK EEPQE
Sbjct: 201 ILTGNKLHLNPVHAVVQLRPSMQHLDAKDSKRKTI---NVEDRVKLEEPQEGKPSGSSKK 257
Query: 362 XXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGA 541
+PEQ DS E W+PLKYHS SD+ A YL+KM ++ GSQI FSMSS DYLNSLCPG
Sbjct: 258 LSKVPEQNNDSGEGWIPLKYHSAKSDVAAGYLRKMMSRGGSQIYFSMSSCDYLNSLCPGT 317
Query: 542 YSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQDHA 721
S SFSSKGP R LLTLPL+ERFRTWLLEGP +HRF+ALK+LAPDESVEE+LGV+Q+HA
Sbjct: 318 SSDSFSSKGPPRRVLLTLPLKERFRTWLLEGPRVHRFDALKYLAPDESVEEILGVIQEHA 377
Query: 722 RLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDVLNV 901
RLVQGLWVPKSSLVYGTDQG+EVLARDYVLLLFSK II SQLP RP L+ AM +VLNV
Sbjct: 378 RLVQGLWVPKSSLVYGTDQGVEVLARDYVLLLFSKNIIINNSQLPQRPQLSKAMKEVLNV 437
Query: 902 LAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPGM---- 1069
LAVER AF DWKL+ELPD SF+K NPS+V+KQEEEWE LE +I D + GGRN PG+
Sbjct: 438 LAVERPAFSDWKLKELPDISFIKRNPSIVQKQEEEWECLEKKINDLLFGGRNGPGVKTSS 497
Query: 1070 RSNTTNNPAT*KSS------------SNLAMAEEVREAI 1150
+SNTTNNPA KSS S AM EEVREA+
Sbjct: 498 KSNTTNNPAAPKSSNRVATRAPNGAPSKTAMPEEVREAV 536
>ref|XP_012855127.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Erythranthe
guttata]
Length = 676
Score = 457 bits (1177), Expect = e-154
Identities = 246/398 (61%), Positives = 287/398 (72%), Gaps = 15/398 (3%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVG 181
LDE C+EVRVKP+ VEIDLAVD SKNYD+ ADP++QM+KQ L + W PPH SG AV
Sbjct: 150 LDEKCDEVRVKPSGEGVEIDLAVDTYSKNYDTTADPKLQMQKQTLRSTWMPPHASGQAVA 209
Query: 182 VLTGNKLYLNPIHTVVQLRPSVQHLESRESKRK-TVGSSNVNDTVKSEEPQEXXXXXXXX 358
VL GNKLYLNPIH VVQLRPS++HL++ +SK+K T SN D+VK E+PQ
Sbjct: 210 VLVGNKLYLNPIHAVVQLRPSMKHLDAEDSKKKKTNARSNTKDSVKLEDPQPSGA----- 264
Query: 359 XXXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQE--GSQISFSMSSDDYLNSLC 532
QTK DWVPLKYHS SD+ A Y++KM A+E GSQISFSMSS+DY+NSLC
Sbjct: 265 -------QTKP---DWVPLKYHSARSDMAATYVKKMMAREVEGSQISFSMSSNDYINSLC 314
Query: 533 PGAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQ 712
PG SGSFSS P IR LL LPL+ERF+TWLLE +HRF+ALKHLAPDES+EEVL VLQ
Sbjct: 315 PGTSSGSFSSNVPPIRSLLALPLKERFKTWLLEANTVHRFDALKHLAPDESIEEVLEVLQ 374
Query: 713 DHARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDV 892
D ARLVQGLW PKS LVYG D G++VLARDYVL LFSK II SQLP RP LANAM DV
Sbjct: 375 DLARLVQGLWFPKSRLVYGIDHGLDVLARDYVLALFSKNVIITNSQLPLRPQLANAMKDV 434
Query: 893 LNVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPGMR 1072
LNVLAVER AF DWKL+ PD +F+K N S+VKK EEEW+ +E +I D +N+ MR
Sbjct: 435 LNVLAVERPAFDDWKLKASPDSNFMKFNQSIVKKHEEEWQGVEKKINDDFNVAKNKAAMR 494
Query: 1073 SNTTNNPAT*KSSSNL------------AMAEEVREAI 1150
SN PA KSSSN+ AM+++VREAI
Sbjct: 495 SNAAKKPAIPKSSSNVETRTPNVSTSRTAMSDDVREAI 532
>emb|CDP02819.1| unnamed protein product [Coffea canephora]
Length = 687
Score = 451 bits (1159), Expect = e-151
Identities = 227/399 (56%), Positives = 279/399 (69%), Gaps = 16/399 (4%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVG 181
LD+ CEEVRVK SAEVE+DLAVDVDSKNYDS ADPRV M KQ LT+ WKPP +G+AVG
Sbjct: 141 LDDRCEEVRVKSKSAEVEVDLAVDVDSKNYDSDADPRVSMTKQTLTSSWKPPVTAGYAVG 200
Query: 182 VLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQEXXXXXXXXX 361
VL GNKL+LNPIH VVQLRPS+QH + SKR+T SSN+ D K EE
Sbjct: 201 VLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRTTASSNLEDNTKGEEVTTGSLKKQGKS 260
Query: 362 XXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGA 541
+ EQ KD+ EDW+PL YH SD++ Y++KM + S I FSM+ DY+N+LCPG
Sbjct: 261 SGPVIEQNKDTREDWIPLNYHGARSDISMSYVRKMVEHDSSHIQFSMNRHDYVNTLCPGT 320
Query: 542 YSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQDHA 721
+ + S GPS R LL+LPL ERFRTWLL+GPP+HRF+ALKHLAPD SVE++L VL HA
Sbjct: 321 SNENNGSNGPSRRVLLSLPLEERFRTWLLQGPPIHRFDALKHLAPDASVEDILAVLSQHA 380
Query: 722 RLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDVLNV 901
+LVQGLW+PKSSL+YG DQGI+ LARDYVLLLFS+ II SQLP + L AM DVLN
Sbjct: 381 QLVQGLWIPKSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLNT 440
Query: 902 LAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPGMRSN- 1078
+A ER + DWK +E PD +F+K N +V++QE+ WERLE I + + G +NRP +++
Sbjct: 441 VAFERASLNDWKFKEPPDMTFIKLNSKIVREQEQTWERLEKLITEKIFGDKNRPATKNSS 500
Query: 1079 ---TTNNPAT*KSSSNLA------------MAEEVREAI 1150
TTNNPAT KS S A M+EE REA+
Sbjct: 501 RPLTTNNPATSKSLSKHASNSLNAGVPRRPMSEETREAL 539
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 443 bits (1139), Expect = e-148
Identities = 227/399 (56%), Positives = 280/399 (70%), Gaps = 16/399 (4%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVG 181
LD+ CEEVRVK SAEVE+DLAVDVDSKNYDS ADPRV M KQ LT+ WKPP +G+AVG
Sbjct: 141 LDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSDADPRVSMTKQTLTSSWKPPVTAGYAVG 200
Query: 182 VLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQEXXXXXXXXX 361
VL GNKL+LNPIH VVQLRPS+QH + SKR+T SSN+ D K EE
Sbjct: 201 VLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRTTASSNLEDNTKGEEVTTGSLKKQGKP 260
Query: 362 XXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGA 541
+ EQ KD+ EDW+PL YH SD++ Y++KM + S I FSM+ D Y+N+LCPG
Sbjct: 261 SGPVIEQNKDTREDWIPLNYHGARSDISMSYVRKMVEHDSSHIQFSMNHD-YVNTLCPGT 319
Query: 542 YSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQDHA 721
+ + S GPS R LL+LPL ERFRTWLL+GPP+HRF+ALKHLAPD SVE++L VL HA
Sbjct: 320 SNENNGSNGPS-RVLLSLPLEERFRTWLLQGPPIHRFDALKHLAPDASVEDILAVLSQHA 378
Query: 722 RLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDVLNV 901
+LVQGLW+PKSSL+YG DQGI+ LARDYVLLLFS+ II SQLP + L AM DVL+
Sbjct: 379 QLVQGLWIPKSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLDT 438
Query: 902 LAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPGMRSN- 1078
+A ER + DWK +E PD +F+K NP +V++QE+ WERLE I + + G +NRP +++
Sbjct: 439 VAFERVSLNDWKFKEPPDMTFIKLNPKIVREQEQTWERLEKLITEKIFGDKNRPATKNSS 498
Query: 1079 ---TTNNPAT*KSSSNLA------------MAEEVREAI 1150
TTNNPAT KS S A M+EE REA+
Sbjct: 499 RPLTTNNPATSKSLSKHASNSLNAGVPRRPMSEETREAL 537
>gb|EYU44675.1| hypothetical protein MIMGU_mgv1a004477mg [Erythranthe guttata]
Length = 525
Score = 415 bits (1066), Expect = e-139
Identities = 230/398 (57%), Positives = 270/398 (67%), Gaps = 15/398 (3%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVG 181
LDE C+EVRVKP+ VEIDLAVD SKNYD+ ADP++QM+KQ L + W PPH SG AV
Sbjct: 150 LDEKCDEVRVKPSGEGVEIDLAVDTYSKNYDTTADPKLQMQKQTLRSTWMPPHASGQAVA 209
Query: 182 VLTGNKLYLNPIHTVVQLRPSVQHLESRESKRK-TVGSSNVNDTVKSEEPQEXXXXXXXX 358
VL GNKLYLNPIH VVQLRPS++HL++ +SK+K T SN D+VK E+PQ
Sbjct: 210 VLVGNKLYLNPIHAVVQLRPSMKHLDAEDSKKKKTNARSNTKDSVKLEDPQPSGA----- 264
Query: 359 XXXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQE--GSQISFSMSSDDYLNSLC 532
QTK DWVPLKYHS SD+ A Y++KM A+E GSQISFSMSS+DY+NSLC
Sbjct: 265 -------QTKP---DWVPLKYHSARSDMAATYVKKMMAREVEGSQISFSMSSNDYINSLC 314
Query: 533 PGAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQ 712
PG SGSFSS ++ HRF+ALKHLAPDES+EEVL VLQ
Sbjct: 315 PGTSSGSFSSNANTV----------------------HRFDALKHLAPDESIEEVLEVLQ 352
Query: 713 DHARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDV 892
D ARLVQGLW PKS LVYG D G++VLARDYVL LFSK II SQLP RP LANAM DV
Sbjct: 353 DLARLVQGLWFPKSRLVYGIDHGLDVLARDYVLALFSKNVIITNSQLPLRPQLANAMKDV 412
Query: 893 LNVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPGMR 1072
LNVLAVER AF DWKL+ PD +F+K N S+VKK EEEW+ +E +I D +N+ MR
Sbjct: 413 LNVLAVERPAFDDWKLKASPDSNFMKFNQSIVKKHEEEWQGVEKKINDDFNVAKNKAAMR 472
Query: 1073 SNTTNNPAT*KSSSNL------------AMAEEVREAI 1150
SN PA KSSSN+ AM+++VREAI
Sbjct: 473 SNAAKKPAIPKSSSNVETRTPNVSTSRTAMSDDVREAI 510
>ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
[Vitis vinifera] gi|297735187|emb|CBI17549.3| unnamed
protein product [Vitis vinifera]
Length = 688
Score = 376 bits (965), Expect = e-122
Identities = 196/365 (53%), Positives = 249/365 (68%), Gaps = 5/365 (1%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVG 181
L E C+EVRVKP SAEVE+DL++DVDSKNYD A +MKKQ L+ WKPP +G+ VG
Sbjct: 137 LGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVG 196
Query: 182 VLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVK----SEEPQEXXXXX 349
VL GNKL+LNPIH VVQLRPS+++L S +KRK + + N VK +EE
Sbjct: 197 VLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKK 256
Query: 350 XXXXXXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSL 529
+ EQ D+ E WVPLKYHS+ SD +ARYLQKM A++ S I F MS +Y+NSL
Sbjct: 257 QNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSL 316
Query: 530 CP-GAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGV 706
CP G + SKG S RFLL++PL ERF+T L EGPP+HRF+ALKH APD SVE+VLGV
Sbjct: 317 CPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGV 376
Query: 707 LQDHARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMI 886
L HA LVQGLWVPKSSL++ QG+ LARDY+LLLFSK +I SQ+ +L A+
Sbjct: 377 LTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALK 436
Query: 887 DVLNVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPG 1066
L++LAVER +F+DWK +E D SF+K +P +V++Q WE LE +I D + GG R
Sbjct: 437 GFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGP 496
Query: 1067 MRSNT 1081
+ N+
Sbjct: 497 VTKNS 501
>ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
[Vitis vinifera] gi|731387214|ref|XP_010649169.1|
PREDICTED: DNA-directed RNA polymerase III subunit RPC5
isoform X1 [Vitis vinifera]
Length = 693
Score = 370 bits (951), Expect = e-119
Identities = 196/370 (52%), Positives = 250/370 (67%), Gaps = 10/370 (2%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVG 181
L E C+EVRVKP SAEVE+DL++DVDSKNYD A +MKKQ L+ WKPP +G+ VG
Sbjct: 137 LGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVG 196
Query: 182 VLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVK----SEEPQEXXXXX 349
VL GNKL+LNPIH VVQLRPS+++L S +KRK + + N VK +EE
Sbjct: 197 VLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKK 256
Query: 350 XXXXXXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSL 529
+ EQ D+ E WVPLKYHS+ SD +ARYLQKM A++ S I F MS +Y+NSL
Sbjct: 257 QNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSL 316
Query: 530 CP-GAYSGSFSSKGPSIRFLLTLPLRERFRTWL-----LEGPPLHRFNALKHLAPDESVE 691
CP G + SKG S RFLL++PL ERF+T L L+GPP+HRF+ALKH APD SVE
Sbjct: 317 CPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEKFSLQGPPVHRFSALKHFAPDNSVE 376
Query: 692 EVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTL 871
+VLGVL HA LVQGLWVPKSSL++ QG+ LARDY+LLLFSK +I SQ+ +L
Sbjct: 377 DVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSL 436
Query: 872 ANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGG 1051
A+ L++LAVER +F+DWK +E D SF+K +P +V++Q WE LE +I D + GG
Sbjct: 437 NKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGG 496
Query: 1052 RNRPGMRSNT 1081
R + N+
Sbjct: 497 GRRGPVTKNS 506
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X4
[Vitis vinifera]
Length = 672
Score = 367 bits (942), Expect = e-118
Identities = 194/363 (53%), Positives = 248/363 (68%), Gaps = 3/363 (0%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVG 181
L E C+EVRVKP SAEVE+DL++DVDSKNYD A +MKKQ L+ WKPP +G+ VG
Sbjct: 137 LGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVG 196
Query: 182 VLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQEXXXXXXXXX 361
VL GNKL+LNPIH VVQLRPS+++L S +KRK + + N VK E E
Sbjct: 197 VLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTNSAVKLEVSNE--------- 247
Query: 362 XXXIPEQTKDS--EEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCP 535
E++ S ++ WVPLKYHS+ SD +ARYLQKM A++ S I F MS +Y+NSLCP
Sbjct: 248 -----EESVGSLKKQSWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCP 302
Query: 536 -GAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQ 712
G + SKG S RFLL++PL ERF+T L EGPP+HRF+ALKH APD SVE+VLGVL
Sbjct: 303 PGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLT 362
Query: 713 DHARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDV 892
HA LVQGLWVPKSSL++ QG+ LARDY+LLLFSK +I SQ+ +L A+
Sbjct: 363 KHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGF 422
Query: 893 LNVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPGMR 1072
L++LAVER +F+DWK +E D SF+K +P +V++Q WE LE +I D + GG R +
Sbjct: 423 LSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVT 482
Query: 1073 SNT 1081
N+
Sbjct: 483 KNS 485
>ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3
[Vitis vinifera]
Length = 677
Score = 362 bits (928), Expect = e-116
Identities = 194/368 (52%), Positives = 249/368 (67%), Gaps = 8/368 (2%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVG 181
L E C+EVRVKP SAEVE+DL++DVDSKNYD A +MKKQ L+ WKPP +G+ VG
Sbjct: 137 LGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVG 196
Query: 182 VLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQEXXXXXXXXX 361
VL GNKL+LNPIH VVQLRPS+++L S +KRK + + N VK E E
Sbjct: 197 VLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTNSAVKLEVSNE--------- 247
Query: 362 XXXIPEQTKDS--EEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCP 535
E++ S ++ WVPLKYHS+ SD +ARYLQKM A++ S I F MS +Y+NSLCP
Sbjct: 248 -----EESVGSLKKQSWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCP 302
Query: 536 -GAYSGSFSSKGPSIRFLLTLPLRERFRTWL-----LEGPPLHRFNALKHLAPDESVEEV 697
G + SKG S RFLL++PL ERF+T L L+GPP+HRF+ALKH APD SVE+V
Sbjct: 303 PGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEKFSLQGPPVHRFSALKHFAPDNSVEDV 362
Query: 698 LGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLAN 877
LGVL HA LVQGLWVPKSSL++ QG+ LARDY+LLLFSK +I SQ+ +L
Sbjct: 363 LGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNK 422
Query: 878 AMIDVLNVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRN 1057
A+ L++LAVER +F+DWK +E D SF+K +P +V++Q WE LE +I D + GG
Sbjct: 423 ALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGR 482
Query: 1058 RPGMRSNT 1081
R + N+
Sbjct: 483 RGPVTKNS 490
>ref|XP_007046992.1| Transcription regulators,zinc ion binding, putative isoform 2
[Theobroma cacao] gi|508699253|gb|EOX91149.1|
Transcription regulators,zinc ion binding, putative
isoform 2 [Theobroma cacao]
Length = 588
Score = 356 bits (914), Expect = e-115
Identities = 198/402 (49%), Positives = 256/402 (63%), Gaps = 19/402 (4%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVG 181
LDE CEEVRVKP S EVE+DLAVDVDS NYDS R++M KQ L++ W PP +G+AVG
Sbjct: 58 LDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVG 117
Query: 182 VLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQE----XXXXX 349
VL G+KL+LNPIH VVQLRPS+ HL+ SKRK +++ TVK EEP +
Sbjct: 118 VLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTK 177
Query: 350 XXXXXXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSL 529
EQ D +E WVPLKYHS+ +D +A+YLQ+M A+E +I F+MS DY++SL
Sbjct: 178 QNKRMQSSTEQKADDKECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSL 237
Query: 530 CPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVL 709
CPGA S + ++GPS R LL++PL ER + L EGPP HRF+ALKH APD S+E++ VL
Sbjct: 238 CPGA-SNNNKAQGPSRRLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVL 296
Query: 710 QDHARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQL-PTRPTLANAMI 886
Q HA LVQGLWVPKSSL++ D + LARDYVLLLFSK II +Q+ P+ +
Sbjct: 297 QKHALLVQGLWVPKSSLLFPEDP-YKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVK 355
Query: 887 DVLNVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGG----- 1051
L +LA+ER +FKDWKL+E D F K P +VK QE+ W E+ + +H+C G
Sbjct: 356 GFLKILAIERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGP 415
Query: 1052 -RNRPG--------MRSNTTNNPAT*KSSSNLAMAEEVREAI 1150
R +PG M S+ + M++E REAI
Sbjct: 416 SRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRTMSDETREAI 457
>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
gi|508699252|gb|EOX91148.1| SIN-like family protein,
putative isoform 1 [Theobroma cacao]
Length = 700
Score = 356 bits (914), Expect = e-114
Identities = 198/402 (49%), Positives = 256/402 (63%), Gaps = 19/402 (4%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVG 181
LDE CEEVRVKP S EVE+DLAVDVDS NYDS R++M KQ L++ W PP +G+AVG
Sbjct: 155 LDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVG 214
Query: 182 VLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQE----XXXXX 349
VL G+KL+LNPIH VVQLRPS+ HL+ SKRK +++ TVK EEP +
Sbjct: 215 VLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTK 274
Query: 350 XXXXXXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSL 529
EQ D +E WVPLKYHS+ +D +A+YLQ+M A+E +I F+MS DY++SL
Sbjct: 275 QNKRMQSSTEQKADDKECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSL 334
Query: 530 CPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVL 709
CPGA S + ++GPS R LL++PL ER + L EGPP HRF+ALKH APD S+E++ VL
Sbjct: 335 CPGA-SNNNKAQGPSRRLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVL 393
Query: 710 QDHARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQL-PTRPTLANAMI 886
Q HA LVQGLWVPKSSL++ D + LARDYVLLLFSK II +Q+ P+ +
Sbjct: 394 QKHALLVQGLWVPKSSLLFPEDP-YKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVK 452
Query: 887 DVLNVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGG----- 1051
L +LA+ER +FKDWKL+E D F K P +VK QE+ W E+ + +H+C G
Sbjct: 453 GFLKILAIERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGP 512
Query: 1052 -RNRPG--------MRSNTTNNPAT*KSSSNLAMAEEVREAI 1150
R +PG M S+ + M++E REAI
Sbjct: 513 SRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRTMSDETREAI 554
>ref|XP_007046993.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao] gi|508699254|gb|EOX91150.1|
Transcription regulators,zinc ion binding, putative
isoform 3 [Theobroma cacao]
Length = 736
Score = 356 bits (914), Expect = e-113
Identities = 198/402 (49%), Positives = 256/402 (63%), Gaps = 19/402 (4%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVG 181
LDE CEEVRVKP S EVE+DLAVDVDS NYDS R++M KQ L++ W PP +G+AVG
Sbjct: 155 LDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVG 214
Query: 182 VLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQE----XXXXX 349
VL G+KL+LNPIH VVQLRPS+ HL+ SKRK +++ TVK EEP +
Sbjct: 215 VLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTK 274
Query: 350 XXXXXXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSL 529
EQ D +E WVPLKYHS+ +D +A+YLQ+M A+E +I F+MS DY++SL
Sbjct: 275 QNKRMQSSTEQKADDKECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSL 334
Query: 530 CPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVL 709
CPGA S + ++GPS R LL++PL ER + L EGPP HRF+ALKH APD S+E++ VL
Sbjct: 335 CPGA-SNNNKAQGPSRRLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVL 393
Query: 710 QDHARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQL-PTRPTLANAMI 886
Q HA LVQGLWVPKSSL++ D + LARDYVLLLFSK II +Q+ P+ +
Sbjct: 394 QKHALLVQGLWVPKSSLLFPEDP-YKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVK 452
Query: 887 DVLNVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGG----- 1051
L +LA+ER +FKDWKL+E D F K P +VK QE+ W E+ + +H+C G
Sbjct: 453 GFLKILAIERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGP 512
Query: 1052 -RNRPG--------MRSNTTNNPAT*KSSSNLAMAEEVREAI 1150
R +PG M S+ + M++E REAI
Sbjct: 513 SRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRTMSDETREAI 554
>ref|XP_009794022.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Nicotiana sylvestris]
Length = 681
Score = 349 bits (895), Expect = e-111
Identities = 192/395 (48%), Positives = 255/395 (64%), Gaps = 12/395 (3%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHI--SGFA 175
L+E C+EVR++P++A++E+DLAVD DSKN+D + V+M+KQ L+ W P SG+A
Sbjct: 142 LEERCQEVRLRPSTAQMEVDLAVDFDSKNFDRDSVHAVKMEKQTLSTSWMPLSTCTSGYA 201
Query: 176 VGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQEXXXXXXX 355
VGVL G+KL+LNPIH VVQLRPS QHL+ E K+K + + + TV+++E +E
Sbjct: 202 VGVLIGDKLHLNPIHAVVQLRPSQQHLKESELKKKNIATGSDGKTVENKEVEEKKPAGPS 261
Query: 356 XXXXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCP 535
P KD EE WV LKYH SD++ARYLQ+M +EGS +SFSMS DYLN++CP
Sbjct: 262 KKQNKPPGNVKDIEEHWVHLKYHGARSDISARYLQEMAMEEGSPVSFSMSPIDYLNAVCP 321
Query: 536 GAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQD 715
G + + K R L LPL ER RTWLLEGPP+HRF+ALKHLA D+ V+E+L VLQ
Sbjct: 322 GRPTDTDRLKILRTR-LSQLPLEERIRTWLLEGPPIHRFDALKHLALDDPVDEILRVLQR 380
Query: 716 HARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDVL 895
+A+LVQGLWVPKSSL+YG + G+EVLAR+++L FSK IIK+ R A L
Sbjct: 381 YAQLVQGLWVPKSSLIYGKNDGLEVLARNFILFEFSKSTIIKQKVFARRLDFLKAAKPTL 440
Query: 896 NVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPGMRS 1075
LAVER DWKL+E PD F VVK+Q+ WE + +I + GGRN+P M++
Sbjct: 441 KSLAVERLDLNDWKLKEHPDKKFEVLYGDVVKEQQATWECMGKQINGILSGGRNKPPMKN 500
Query: 1076 NTTN----------NPAT*KSSSNLAMAEEVREAI 1150
+N PA S S +M+E+ REA+
Sbjct: 501 LNSNANIPALPGGGKPAP-GSLSRTSMSEKTREAL 534
>ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X4 [Solanum tuberosum]
Length = 536
Score = 342 bits (877), Expect = e-110
Identities = 192/395 (48%), Positives = 255/395 (64%), Gaps = 12/395 (3%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKP--PHISGFA 175
L+E C+EVR++P++AE+E+DLA+D+DSKN+D + +KKQ+L+ W P SG+A
Sbjct: 128 LEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVHAATIKKQMLSTSWMPLPTCASGYA 187
Query: 176 VGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQEXXXXXXX 355
VGVL G+KL+LNP+H VVQLRPS ++L+ E K K V ++N +V++E+ +E
Sbjct: 188 VGVLIGDKLHLNPVHAVVQLRPSKRNLKESELK-KNVTTNNDEKSVENEDVKEKRPMGPS 246
Query: 356 XXXXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCP 535
P KD E W+ LKYH SD++ARYLQKM +EGS + FSMS DYLN+ P
Sbjct: 247 KKQNKPPGIEKDIGEHWLHLKYHGARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFP 306
Query: 536 GAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQD 715
G + + K R L LPL ER RTWLLEGPP+HRF+ALKHLAPD S +E++ VLQ
Sbjct: 307 GRPTDTDRLKILRTR-LSQLPLEERVRTWLLEGPPIHRFDALKHLAPDNSADEIIRVLQI 365
Query: 716 HARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDVL 895
+A+LVQGLWVPKSSLVYGT+ G+EVLAR++VL F+K +IKKS RP A L
Sbjct: 366 YAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPAL 425
Query: 896 NVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPGMRS 1075
LAVER DWKL+E PD F VV++++ WE L +I D + GGRNRP M++
Sbjct: 426 KSLAVERPDLNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKN 485
Query: 1076 NTTNN---PA-------T*KSSSNLAMAEEVREAI 1150
N PA T S +M+EE+REA+
Sbjct: 486 PLNPNADIPALPSGDKPTSSSLLRTSMSEEIREAL 520
>ref|XP_009621596.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X2 [Nicotiana tomentosiformis]
Length = 584
Score = 342 bits (878), Expect = e-110
Identities = 188/396 (47%), Positives = 253/396 (63%), Gaps = 13/396 (3%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHI--SGFA 175
L+E C+EVR++P++A++E+DLA+D DSKN+D + V+M+KQ L+ W P SG+A
Sbjct: 142 LEERCQEVRLRPSTAQMEVDLAIDFDSKNFDRDSVHAVKMEKQTLSTSWMPLSTCTSGYA 201
Query: 176 VGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQEXXXXXXX 355
VGVL G++L+LNPIH VVQLRPS QHL+ E K+K + +S+ TV+ ++ +E
Sbjct: 202 VGVLIGDELHLNPIHAVVQLRPSQQHLKESELKKKNIATSSDGKTVEKKDVEEKKPAGPS 261
Query: 356 XXXXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCP 535
P KD EE WV LKYH SD++ARYLQ+M +EGS + FSMS DYLN++CP
Sbjct: 262 KKQNKPPGNDKDIEEHWVHLKYHGARSDISARYLQEMAMEEGSPVPFSMSPVDYLNAVCP 321
Query: 536 GAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQD 715
G + + K R L LPL ER RTWLLEGPP+HRF+ALKHLA D+ V+E+L VLQ
Sbjct: 322 GRPTDTDRLKILRTR-LSQLPLEERIRTWLLEGPPIHRFDALKHLALDDPVDEILRVLQR 380
Query: 716 HARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDVL 895
+A+LVQGLWVPKSSL+YG + G+EVLAR+++L FSK IIK+ R A L
Sbjct: 381 YAQLVQGLWVPKSSLIYGKNDGLEVLARNFILFEFSKSTIIKQKVFARRLDFLKAAKPTL 440
Query: 896 NVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPGMRS 1075
LAVER DWKL+E PD F VVK+Q+ WE + +I + GGRNRP +++
Sbjct: 441 KSLAVERPDLIDWKLKEHPDKKFEVLYGDVVKEQQATWECMGKQINGILSGGRNRPALKN 500
Query: 1076 NTTNN-----------PAT*KSSSNLAMAEEVREAI 1150
+N PA S +M+E+ REA+
Sbjct: 501 PLNSNDNIPALPGGGTPAP-GSLLRTSMSEKTREAL 535
>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
Length = 666
Score = 343 bits (879), Expect = e-109
Identities = 197/407 (48%), Positives = 255/407 (62%), Gaps = 24/407 (5%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALW--KPPHISGFA 175
L+E C+EVR++PT+A++E+DLA+D DSKN+D + +M+KQ ++ W P SG+A
Sbjct: 130 LEERCKEVRLRPTTAQMEVDLAIDFDSKNFDRDSIYAEKMEKQTVSTSWIPVPTGTSGYA 189
Query: 176 VGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQEXXXXXXX 355
VGVL G+KL+LNPIHTVVQLRPS QHL+ E K K + +SN TV++EE +E
Sbjct: 190 VGVLIGDKLHLNPIHTVVQLRPSKQHLKESELK-KNIATSNDEKTVENEEIKENKPVAPS 248
Query: 356 XXXXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSD-------- 511
P KD EE WV LKYH S+++ARYLQ+M +EGS I FSMS
Sbjct: 249 KKQNKPPGNDKDIEEHWVHLKYHGARSEISARYLQRMAMEEGSPIPFSMSLAFFSVNLIH 308
Query: 512 --DYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDES 685
DYL +LCPG + + K IR + LPL ERFRTWL EGPP+HRF ALKHLA D
Sbjct: 309 RVDYLRTLCPGRPNDTDKYKDLRIR-VSQLPLDERFRTWLHEGPPIHRFGALKHLALDNP 367
Query: 686 VEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRP 865
VEE+L VLQ +A++VQGLWVPKSSLVYG + G EVLARD+VL FSK IK+S +P
Sbjct: 368 VEEILEVLQRYAQVVQGLWVPKSSLVYGRNDGHEVLARDFVLFEFSKSPFIKQSVFDRKP 427
Query: 866 TLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVC 1045
A L +LAVER DWKL+E PD F +VK+Q+ WERL +I +
Sbjct: 428 EFFKAATPALKLLAVERPDLNDWKLKEHPDKEFENLYGDLVKEQQVTWERLGKQIYGLLA 487
Query: 1046 GGRNRPGMRSNTTNNPA------------T*KSSSNLAMAEEVREAI 1150
GGRNRP M++ +NP+ T +S + +M+E REA+
Sbjct: 488 GGRNRPTMKN--PSNPSAGIPALPSGGKPTPRSVTRTSMSERTREAL 532
>ref|XP_009621595.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X1 [Nicotiana tomentosiformis]
Length = 682
Score = 342 bits (878), Expect = e-109
Identities = 188/396 (47%), Positives = 253/396 (63%), Gaps = 13/396 (3%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHI--SGFA 175
L+E C+EVR++P++A++E+DLA+D DSKN+D + V+M+KQ L+ W P SG+A
Sbjct: 142 LEERCQEVRLRPSTAQMEVDLAIDFDSKNFDRDSVHAVKMEKQTLSTSWMPLSTCTSGYA 201
Query: 176 VGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQEXXXXXXX 355
VGVL G++L+LNPIH VVQLRPS QHL+ E K+K + +S+ TV+ ++ +E
Sbjct: 202 VGVLIGDELHLNPIHAVVQLRPSQQHLKESELKKKNIATSSDGKTVEKKDVEEKKPAGPS 261
Query: 356 XXXXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCP 535
P KD EE WV LKYH SD++ARYLQ+M +EGS + FSMS DYLN++CP
Sbjct: 262 KKQNKPPGNDKDIEEHWVHLKYHGARSDISARYLQEMAMEEGSPVPFSMSPVDYLNAVCP 321
Query: 536 GAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQD 715
G + + K R L LPL ER RTWLLEGPP+HRF+ALKHLA D+ V+E+L VLQ
Sbjct: 322 GRPTDTDRLKILRTR-LSQLPLEERIRTWLLEGPPIHRFDALKHLALDDPVDEILRVLQR 380
Query: 716 HARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDVL 895
+A+LVQGLWVPKSSL+YG + G+EVLAR+++L FSK IIK+ R A L
Sbjct: 381 YAQLVQGLWVPKSSLIYGKNDGLEVLARNFILFEFSKSTIIKQKVFARRLDFLKAAKPTL 440
Query: 896 NVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPGMRS 1075
LAVER DWKL+E PD F VVK+Q+ WE + +I + GGRNRP +++
Sbjct: 441 KSLAVERPDLIDWKLKEHPDKKFEVLYGDVVKEQQATWECMGKQINGILSGGRNRPALKN 500
Query: 1076 NTTNN-----------PAT*KSSSNLAMAEEVREAI 1150
+N PA S +M+E+ REA+
Sbjct: 501 PLNSNDNIPALPGGGTPAP-GSLLRTSMSEKTREAL 535
>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X1 [Solanum tuberosum]
Length = 669
Score = 342 bits (877), Expect = e-109
Identities = 192/395 (48%), Positives = 255/395 (64%), Gaps = 12/395 (3%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKP--PHISGFA 175
L+E C+EVR++P++AE+E+DLA+D+DSKN+D + +KKQ+L+ W P SG+A
Sbjct: 128 LEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVHAATIKKQMLSTSWMPLPTCASGYA 187
Query: 176 VGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQEXXXXXXX 355
VGVL G+KL+LNP+H VVQLRPS ++L+ E K K V ++N +V++E+ +E
Sbjct: 188 VGVLIGDKLHLNPVHAVVQLRPSKRNLKESELK-KNVTTNNDEKSVENEDVKEKRPMGPS 246
Query: 356 XXXXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCP 535
P KD E W+ LKYH SD++ARYLQKM +EGS + FSMS DYLN+ P
Sbjct: 247 KKQNKPPGIEKDIGEHWLHLKYHGARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFP 306
Query: 536 GAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQD 715
G + + K R L LPL ER RTWLLEGPP+HRF+ALKHLAPD S +E++ VLQ
Sbjct: 307 GRPTDTDRLKILRTR-LSQLPLEERVRTWLLEGPPIHRFDALKHLAPDNSADEIIRVLQI 365
Query: 716 HARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDVL 895
+A+LVQGLWVPKSSLVYGT+ G+EVLAR++VL F+K +IKKS RP A L
Sbjct: 366 YAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPAL 425
Query: 896 NVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPGMRS 1075
LAVER DWKL+E PD F VV++++ WE L +I D + GGRNRP M++
Sbjct: 426 KSLAVERPDLNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKN 485
Query: 1076 NTTNN---PA-------T*KSSSNLAMAEEVREAI 1150
N PA T S +M+EE+REA+
Sbjct: 486 PLNPNADIPALPSGDKPTSSSLLRTSMSEEIREAL 520
>ref|XP_009608223.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Nicotiana tomentosiformis]
Length = 681
Score = 342 bits (876), Expect = e-108
Identities = 192/396 (48%), Positives = 253/396 (63%), Gaps = 13/396 (3%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHI--SGFA 175
L+E C+EVR++P++A++E+DLAVD+DSKN+D + V+M+KQ L+ W P SG+A
Sbjct: 142 LEERCQEVRLRPSTAQMEVDLAVDLDSKNFDRDSVHAVKMEKQTLSTSWMPLSTCTSGYA 201
Query: 176 VGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQEXXXXXXX 355
VGVL G+KL+LNPIH VVQLRPS QHL+ E K K + +S+ TV+++E +E
Sbjct: 202 VGVLIGDKLHLNPIHAVVQLRPSQQHLKESELK-KNIATSSDGKTVENKEVEEKKPAGPS 260
Query: 356 XXXXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCP 535
P KD EE WV LKYH SD++ARYLQ++ EGS +SFSMS DYLN++CP
Sbjct: 261 KKQNKPPGNDKDIEEHWVHLKYHGARSDISARYLQEIAMAEGSPVSFSMSPVDYLNAVCP 320
Query: 536 GAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQD 715
G + + K R L LPL ER RTWLLEGPP+HRF+ALKHLA D+ V+E+L VLQ
Sbjct: 321 GRPTDTDRLKILRTR-LSQLPLEERIRTWLLEGPPIHRFDALKHLALDDPVDEILRVLQR 379
Query: 716 HARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDVL 895
+A+LVQGLWVPKSSL+YG + G+EVLAR+++L FSK IIK+ R A L
Sbjct: 380 YAQLVQGLWVPKSSLIYGKNDGLEVLARNFILFEFSKSTIIKQKVFARRLDFLKAAKPTL 439
Query: 896 NVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPGMRS 1075
LAVER DWKL+E PD F VVK+Q+ WE + +I + GGRNRP M++
Sbjct: 440 KSLAVERPDLNDWKLKEHPDKKFEVLYGDVVKEQQATWECMGKQINGILSGGRNRPAMKN 499
Query: 1076 NTTNN-----------PAT*KSSSNLAMAEEVREAI 1150
N PA S +M+E+ REA+
Sbjct: 500 PLNPNANIPALPGGGKPAP-GSLLRTSMSEKTREAL 534
>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
lycopersicum]
Length = 669
Score = 341 bits (874), Expect = e-108
Identities = 188/395 (47%), Positives = 255/395 (64%), Gaps = 12/395 (3%)
Frame = +2
Query: 2 LDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQMKKQILTALW--KPPHISGFA 175
L+E C+EVR++P++AE+E+DLA+D+DSKN+D + +KKQ+L+ W P SG+A
Sbjct: 128 LEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVHAATVKKQMLSTSWIPLPTCTSGYA 187
Query: 176 VGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSNVNDTVKSEEPQEXXXXXXX 355
VGVL G+KL+LNP+H VVQLRPS ++L+ E K+ + ++N +V++E+ +E
Sbjct: 188 VGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKNII-TNNDEKSVENEDVKEKRPVGPS 246
Query: 356 XXXXXIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCP 535
P KD E W+ LKYH SD++ARYLQKM +EGS + FSMS DYLN+ CP
Sbjct: 247 KKQNKSPGIEKDIGEHWLHLKYHGARSDISARYLQKMSMEEGSPVPFSMSPVDYLNAFCP 306
Query: 536 GAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQD 715
G + + K R L LPL ER R WLLEGPP+HRF+AL HLAPD S +E++ VLQ
Sbjct: 307 GRPTDTDRLKILRTR-LSQLPLEERVRIWLLEGPPIHRFDALMHLAPDNSADEIIRVLQI 365
Query: 716 HARLVQGLWVPKSSLVYGTDQGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDVL 895
+A+LVQGLWVPKSSLVYGT+ G+EVLAR++VL F+K +IKKS RP A L
Sbjct: 366 YAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPAL 425
Query: 896 NVLAVEREAFKDWKLRELPDFSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPGMRS 1075
LAVER DWKL+E PD F VV++Q+ WE L +I D + GGR RP M++
Sbjct: 426 KSLAVERPDLNDWKLKEHPDKKFENLYGDVVREQQATWECLGKQINDVLPGGRTRPTMKN 485
Query: 1076 NTTNN------PAT*KSSSN----LAMAEEVREAI 1150
N P+ K +S+ +M+EE+REA+
Sbjct: 486 PINRNADITALPSGDKPTSSSLLRTSMSEEIREAL 520