BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00011646
         (1305 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006442418.1| hypothetical protein CICLE_v10023471mg, part...   223   6e-68
ref|XP_006432011.1| hypothetical protein CICLE_v10003098mg [Citr...   194   4e-57
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...   178   4e-46
ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobrom...   168   9e-46
gb|AJE29370.1| putative gag protein [Coffea canephora]                169   1e-44
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   172   3e-43
ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily prot...   169   2e-42
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    167   1e-41
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905...   164   3e-40
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc...   155   2e-39
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc...   154   7e-39
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc...   151   5e-38
gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposo...   146   1e-37
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]        151   2e-37
gb|KYP67041.1| Retrovirus-related Pol polyprotein from transposo...   146   6e-37
gb|KYP77941.1| Retrovirus-related Pol polyprotein from transposo...   143   3e-36
gb|KYP62517.1| Retrovirus-related Pol polyprotein from transposo...   142   4e-36
gb|KUM46798.1| hypothetical protein ABT39_MTgene6253 (mitochondr...   137   6e-36
gb|KOM55736.1| hypothetical protein LR48_Vigan10g162800 [Vigna a...   141   7e-36
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]   150   8e-36

>ref|XP_006442418.1| hypothetical protein CICLE_v10023471mg, partial [Citrus clementina]
           gi|557544680|gb|ESR55658.1| hypothetical protein
           CICLE_v10023471mg, partial [Citrus clementina]
          Length = 185

 Score =  223 bits (567), Expect = 6e-68
 Identities = 123/197 (62%), Positives = 136/197 (69%)
 Frame = +3

Query: 366 VMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXXXXXXXTSMSDEDWEDLDLRAASTIRL 545
           V+IQ GLHKAL+                            S+SDEDWE+LD RAAS IRL
Sbjct: 1   VLIQFGLHKALRGKPSPASNSGSGK--------------ASISDEDWEELDDRAASAIRL 46

Query: 546 CLAKNVLANVHGISNAKELWEKLEALYQAKGISNRLYLKEQFHTLRMNEGSKISDHLSTL 725
           CLAKNVLANV  I  AKELWEKLE LYQ K ISNRLYLKEQFHTLRM EG+KISDHLS L
Sbjct: 47  CLAKNVLANVGNIPTAKELWEKLEKLYQTKSISNRLYLKEQFHTLRMAEGTKISDHLSVL 106

Query: 726 NGIISELEAIGVKIEDEDKALRLILSLPHSYEHMKPILMYGKETLIFAEVTGKLLSEERR 905
           NGI+SELEAIGVKIED+DKALRL+ SLP SY+HM P LMYGKE +   EVT  LLSEERR
Sbjct: 107 NGIVSELEAIGVKIEDDDKALRLLWSLPTSYKHMLPTLMYGKEIVDLEEVTSTLLSEERR 166

Query: 906 LMSDGRTSTENSVAVAV 956
           L  +   + + S    V
Sbjct: 167 LSGESTETIDVSTLAVV 183


>ref|XP_006432011.1| hypothetical protein CICLE_v10003098mg [Citrus clementina]
           gi|557534133|gb|ESR45251.1| hypothetical protein
           CICLE_v10003098mg [Citrus clementina]
          Length = 182

 Score =  194 bits (494), Expect = 4e-57
 Identities = 114/225 (50%), Positives = 131/225 (58%)
 Frame = +3

Query: 282 KFSNSMKFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXX 461
           KFS+ +KF++EKFDGRINFGLWQVQVKDV+IQSGLHKALK                    
Sbjct: 5   KFSSPVKFEIEKFDGRINFGLWQVQVKDVLIQSGLHKALKGKPSPASNSGSG-------- 56

Query: 462 XXXXXXXTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGI 641
                     + E WE L                                 E LY+ K I
Sbjct: 57  --------KTTKELWEKL---------------------------------EKLYRTKSI 75

Query: 642 SNRLYLKEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYE 821
           SNRLYLKE+FHTLRM EG+KI DHLS LNGI+ ELEAIGVKIED DKALRL+ SLP SY+
Sbjct: 76  SNRLYLKERFHTLRMTEGTKIFDHLSVLNGIVLELEAIGVKIEDGDKALRLLWSLPTSYK 135

Query: 822 HMKPILMYGKETLIFAEVTGKLLSEERRLMSDGRTSTENSVAVAV 956
           H+ P LMYGKET+   EVT  LLSEERRL  +   +T+ S    V
Sbjct: 136 HLLPTLMYGKETVNLEEVTNTLLSEERRLSGESTETTDVSALAVV 180


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 690

 Score =  178 bits (452), Expect = 4e-46
 Identities = 108/266 (40%), Positives = 150/266 (56%), Gaps = 17/266 (6%)
 Frame = +3

Query: 288  SNSMKFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXX 467
            S   KFD+EKFDG+I F +W+VQ+K V+ Q+GL KAL                       
Sbjct: 2    STVTKFDIEKFDGKICFSIWKVQMKAVLTQNGLKKALDGKAKKP---------------- 45

Query: 468  XXXXXTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISN 647
                  +M+DE W++LD +A S I+LCL+K VL  V   + A  LW KLE+LY  K ++N
Sbjct: 46   -----VNMTDEQWDELDEKALSAIQLCLSKEVLREVANETTAAALWLKLESLYMTKSLAN 100

Query: 648  RLYLKEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHM 827
            +L LKE+ +T+RM EG+ I  HL+  N II +LE I +KI+DEDKA+ LI+SLP +Y+H 
Sbjct: 101  KLRLKERLYTIRMVEGTPIQSHLNEFNSIIMDLENIEIKIDDEDKAVLLIVSLPSTYKHF 160

Query: 828  KPILMY-GKETLIFAEVTGKLLSEER------------RLMSDGRT----STENSVAVAV 956
            K I++Y   +TL F +V   LLS+E+             L   GRT    ST N  + + 
Sbjct: 161  KEIMLYSNNDTLSFEDVKSNLLSKEKFDLDIHSEDKGEGLSVRGRTQEKGSTSNKKSRSK 220

Query: 957  SKGRKKDSKNVVCWKCGEPGHTKRNC 1034
            S+GRK    N  C  C + GH   +C
Sbjct: 221  SRGRK---SNKTCRYCKKFGHDISDC 243


>ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
            gi|508717229|gb|EOY09126.1| Uncharacterized protein
            TCM_024518 [Theobroma cacao]
          Length = 277

 Score =  168 bits (426), Expect = 9e-46
 Identities = 96/281 (34%), Positives = 158/281 (56%), Gaps = 12/281 (4%)
 Frame = +3

Query: 288  SNSMKFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXX 467
            ++S K+++EKF+GR +F LW+V++  +++Q GL KALK                      
Sbjct: 3    TSSTKYEIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLP---------------- 46

Query: 468  XXXXXTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISN 647
                 +++SD + +DL  +A S I L L+  VL  V    +A  +W KLE++Y  K ++N
Sbjct: 47   -----SNLSDSEKDDLMEKAHSAILLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTN 101

Query: 648  RLYLKEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHM 827
            RLY+K++ +TL+M+EG+ ++ H+   N +I +L+ I VKIEDED AL L+  LP SYE+ 
Sbjct: 102  RLYMKQRLYTLKMSEGTSVNTHIDEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENF 161

Query: 828  KPILMYGKETLIFAEVTGKLLSEERRLMSDGRTSTENSVAVAVSKGRKKD---------- 977
               ++YG++TL F +V   L S+E +    G  +   +  + V++GR K+          
Sbjct: 162  VDTMLYGRDTLTFEDVRAYLNSKELKKKVGGIRNENQAEGLVVNRGRGKEKGLDKKGKSR 221

Query: 978  SKNVVCWKCGEPGHTKRNCQ--GGAGAANSSESKANIVIDE 1094
            +K   CW CG+ GH +++C         N SE+ AN+V D+
Sbjct: 222  AKGKTCWNCGQKGHFRQDCTKFKDDEKFNKSENTANVVGDD 262


>gb|AJE29370.1| putative gag protein [Coffea canephora]
          Length = 433

 Score =  169 bits (429), Expect = 1e-44
 Identities = 98/265 (36%), Positives = 148/265 (55%), Gaps = 18/265 (6%)
 Frame = +3

Query: 294  SMKFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXXXX 473
            +++F ++ F+G  +F LWQ +VKDV++Q GL KAL                         
Sbjct: 5    TIQFPIQPFNGTTSFTLWQRRVKDVLVQQGLAKALNGKNKKPE----------------- 47

Query: 474  XXXTSMSDEDWEDLDLRAASTIRLCLAKNVLANV-HGISNAKELWEKLEALYQAKGISNR 650
                SM+D+++E+LD R ASTIRL +A N++ NV     +A +LW+KLE LY AK +SN+
Sbjct: 48   ----SMNDDEFEELDARCASTIRLYVADNIINNVIDEKDSAADLWKKLEKLYLAKSLSNK 103

Query: 651  LYLKEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHMK 830
            L+LK QF+ L+M EG  + DH++T NGI+ +L+ +GV IE+E+KAL L+  +  SYE + 
Sbjct: 104  LHLKRQFYALKMVEGGSLMDHMNTFNGILDQLQKVGVDIEEENKALLLLTPVSDSYESVV 163

Query: 831  PILMYGKETLIFAEVTGKLLSEERRLMSDGRTSTENSVAVAVSKGRKKDSK--------- 983
              L+YGK+TL F  V   LL  E++  ++   + E   A  +++G  K  K         
Sbjct: 164  TTLLYGKDTLEFENVQSSLLDHEKQRKANQDVTQE---AALIARGENKRGKQFGGESKAG 220

Query: 984  --------NVVCWKCGEPGHTKRNC 1034
                     + C+ C E GH KR C
Sbjct: 221  GSKAKRKGGIQCFGCHEFGHIKRYC 245


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  172 bits (436), Expect = 3e-43
 Identities = 106/320 (33%), Positives = 177/320 (55%), Gaps = 23/320 (7%)
 Frame = +3

Query: 291  NSMKFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXXX 470
            + +K++V KF+G   F  WQ +++D++IQ GLHK L                        
Sbjct: 2    SGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPD---------------- 45

Query: 471  XXXXTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISNR 650
                 +M  EDW DLD RAAS IRL L+ +V+ N+     A+ +W +LE+LY +K ++N+
Sbjct: 46   -----TMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNK 100

Query: 651  LYLKEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHMK 830
            LYLK+Q + L M+EG+    HL+  NG+I++L  +GVKIE+EDKA+ L+ SLP SY+++ 
Sbjct: 101  LYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLA 160

Query: 831  PILMYGKETLIFAEVTGKLLSEER----------RLMSDGR----TSTENSVAVAVSKGR 968
              +++GK T+   +VT  LL  E+           L+++GR      + N+   + ++G+
Sbjct: 161  TTILHGKTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGK 220

Query: 969  KKD-SKNVV--CWKCGEPGHTKRNC------QGGAGAANSSESKANIVIDEDFL*GENVH 1121
             K+ SK+ V  C+ C +PGH KR+C      +G      + ++ A +V + D     NV 
Sbjct: 221  SKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNND-----NV- 274

Query: 1122 PYGMCLVVMKKDVMVLAGPQ 1181
               +  +  +++ M L+GP+
Sbjct: 275  ---VLFINEEEECMHLSGPE 291


>ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
            gi|508775449|gb|EOY22705.1| Transducin/WD40 repeat-like
            superfamily protein [Theobroma cacao]
          Length = 1029

 Score =  169 bits (429), Expect = 2e-42
 Identities = 95/281 (33%), Positives = 158/281 (56%), Gaps = 12/281 (4%)
 Frame = +3

Query: 288  SNSMKFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXX 467
            ++S K+++EKF+GR +F LW+V+++ +++Q GL KALK                      
Sbjct: 125  TSSTKYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLP---------------- 168

Query: 468  XXXXXTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISN 647
                 +++SD + +DL  +A S I L L+  VL  V    +A  +W KLE++Y  K ++N
Sbjct: 169  -----SNLSDGEKDDLMKKAHSVILLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTN 223

Query: 648  RLYLKEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHM 827
            RLY+K++ +TL+M+EG+ ++ H+   N +I +L+ I VKIEDED AL L+  LP SYE+ 
Sbjct: 224  RLYMKQRLYTLKMSEGTSVNTHIDEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENF 283

Query: 828  KPILMYGKETLIFAEVTGKLLSEERRLMSDGRTSTENSVAVAVSKGRKKD---------- 977
               ++YG++TL F +V   L  +E +    G  +   +  + V++GR K+          
Sbjct: 284  VDTMLYGRDTLTFEDVRASLNFKELKKKVGGIRNENQAEGLVVNRGRGKEKGLDRKGKSR 343

Query: 978  SKNVVCWKCGEPGHTKRNCQ--GGAGAANSSESKANIVIDE 1094
            +K   CW CG+ GH +++C         N SE+ AN+V D+
Sbjct: 344  AKGKTCWNCGQKGHFRQDCTKFKDDEKFNKSENTANVVGDD 384


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  167 bits (424), Expect = 1e-41
 Identities = 115/349 (32%), Positives = 180/349 (51%), Gaps = 34/349 (9%)
 Frame = +3

Query: 291  NSMKFDVEKFDG-RINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXX 467
            + +K++V KF+G +  F +WQ ++KD++IQ GLHKAL                       
Sbjct: 2    SGVKYEVAKFNGDKPVFSMWQRRMKDLLIQQGLHKAL---------------------GG 40

Query: 468  XXXXXTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISN 647
                  SM  EDWE+LD +AAS IRL L  +V+ N+    +A  +W KLE LY +K ++N
Sbjct: 41   KSKKPESMKLEDWEELDEKAASAIRLHLTDDVVNNIVDEESACGIWTKLENLYMSKTLTN 100

Query: 648  RLYLKEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHM 827
            +LYLK+Q +TL M+EG+    HL+ LNG+I++L  +GVKIE+EDK + L+ SLP SY+ +
Sbjct: 101  KLYLKKQLYTLHMDEGTNFLSHLNVLNGLITQLANLGVKIEEEDKRIVLLNSLPSSYDTL 160

Query: 828  KPILMYGKETLIFAEVTGKLLSEERR------------LMSDGRTSTENSVAVAVSKGRK 971
               +++GK+++   +VT  LL  E+               S GR+   +S     S  R 
Sbjct: 161  STTILHGKDSIQLKDVTSALLLNEKMRKKPENHGQVFITESRGRSYQRSSSNYGRSGARG 220

Query: 972  KD-----SKNVVCWKCGEPGHTKRNC------QGGAGAANSSESKANIVIDEDFL*GENV 1118
            K      SK   C+ C +PGH KR+C      +G +    + ++ A +V + D +     
Sbjct: 221  KSKVRSKSKARNCYNCDQPGHFKRDCPNPKRGKGESSGQKNDDNTAAMVQNNDDV----- 275

Query: 1119 HPYGMCLVVMKKDVMVLAGPQ---VYTQALTWHG-------CRVCGGCY 1235
                + L+  +++ M LAG +   V   A ++H        CR   G Y
Sbjct: 276  ----VLLINEEEECMHLAGTESEWVVDTAASYHATPVRDLFCRYVAGDY 320


>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp.
            vulgaris]
          Length = 2676

 Score =  164 bits (414), Expect = 3e-40
 Identities = 95/261 (36%), Positives = 143/261 (54%), Gaps = 1/261 (0%)
 Frame = +3

Query: 297  MKFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXXXXX 476
            MK D+EKFD  INFGLWQV++K ++IQ+G+HKAL+                         
Sbjct: 1    MKLDIEKFDRSINFGLWQVKMKALLIQNGVHKALEGKVKKP------------------- 41

Query: 477  XXTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISNRLY 656
              T+M++E WE+LDL+A   I+LCL+  VL  V    ++  LW KLE+LY AK ++NRL 
Sbjct: 42   --TTMTEEKWEELDLKALLAIQLCLSNEVLREVAKEDSSAGLWLKLESLYMAKSVTNRLL 99

Query: 657  LKEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHMKPI 836
            LK + ++LR+ EG+ +  H+     I+ +L+ I V ++DED A+ L+ SLPHSY+H +  
Sbjct: 100  LKSRLYSLRLEEGNSLKSHIDEFYSIVMDLQNIDVILDDEDLAIWLLCSLPHSYKHFRET 159

Query: 837  LMYGKETLIFAEVTGKLLSEERRLMSDGRTS-TENSVAVAVSKGRKKDSKNVVCWKCGEP 1013
            ++YG++ L   +V   L   +R L+ +  TS + NS      +GR  D  +         
Sbjct: 160  ILYGRDDLSIDDVRDAL--NQRELIDNQLTSKSSNSSDGLFVRGRSNDVASTY------- 210

Query: 1014 GHTKRNCQGGAGAANSSESKA 1076
                   QGG G  N   SK+
Sbjct: 211  -------QGGNGGKNRGRSKS 224


>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 424

 Score =  155 bits (393), Expect = 2e-39
 Identities = 88/253 (34%), Positives = 135/253 (53%), Gaps = 8/253 (3%)
 Frame = +3

Query: 300  KFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXXXXXX 479
            KF+V KFDG  NF LWQ+++KD++ Q G+ KAL+                          
Sbjct: 8    KFEVVKFDGTGNFVLWQMRLKDLLAQQGISKALEETMPE--------------------- 46

Query: 480  XTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISNRLYL 659
               M    WE++  +AA+TIRL L+ +V+  V     +KE+W KL +LY +K ++++LYL
Sbjct: 47   --KMDAGKWEEMKAQAAATIRLSLSDSVMYQVMDEKTSKEIWVKLTSLYMSKSLTSKLYL 104

Query: 660  KEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHMKPIL 839
            K+Q + L+M E S +  H+   N ++ +L  + VK++DEDKA+ L+ SLP SYEH+  IL
Sbjct: 105  KQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLPPSYEHVVTIL 164

Query: 840  MYGKETLIFAEVTGKLLSEERRLMSDGRTSTENSVAVAVSKGR--------KKDSKNVVC 995
             +GK+T I  E+   LL+ + R          +     + K +        K   K   C
Sbjct: 165  THGKDT-IKTEIISSLLARDLRRSKKNEAMEASQAESLLVKAKHDHEAGVSKSKEKGARC 223

Query: 996  WKCGEPGHTKRNC 1034
            +KC E GH +RNC
Sbjct: 224  YKCHEFGHIRRNC 236


>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 425

 Score =  154 bits (389), Expect = 7e-39
 Identities = 86/253 (33%), Positives = 134/253 (52%), Gaps = 8/253 (3%)
 Frame = +3

Query: 300  KFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXXXXXX 479
            KF+V KFDG  NF LWQ+++KD++ Q G+ KAL+                          
Sbjct: 8    KFEVVKFDGTGNFILWQMRLKDLLAQQGISKALEETMPE--------------------- 46

Query: 480  XTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISNRLYL 659
               M    WE++  +AA+TIRL L+ +V+  V      KE+W+KL +LY +K ++++LYL
Sbjct: 47   --KMDAGKWEEMKAQAAATIRLSLSDSVMYPVMDEKTPKEIWDKLASLYMSKSLTSKLYL 104

Query: 660  KEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHMKPIL 839
            K+Q + L+M E S +  H+   N ++ +L  + VK++DED A+ L+ SLP SYEH+   L
Sbjct: 105  KQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVKLDDEDMAIILLCSLPPSYEHVVTTL 164

Query: 840  MYGKETLIFAEVTGKLLSEERRLMSDGRTSTENSVAVAVSKGR--------KKDSKNVVC 995
            M+GK+T+   E    LL+ + R  +       +     + K +        K   K   C
Sbjct: 165  MHGKDTVKTEEKISSLLARDLRRSNKNEAMEASQAESLLVKAKHDHEAGVSKSKDKGARC 224

Query: 996  WKCGEPGHTKRNC 1034
            +KC E GH +RNC
Sbjct: 225  YKCHEFGHIRRNC 237


>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 415

 Score =  151 bits (382), Expect = 5e-38
 Identities = 84/253 (33%), Positives = 137/253 (54%), Gaps = 8/253 (3%)
 Frame = +3

Query: 300  KFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXXXXXX 479
            KF+V KFDG  NF LWQ+++KD++ Q G+ KAL+                          
Sbjct: 8    KFEVVKFDGTGNFVLWQMRLKDLLAQQGISKALQETMPE--------------------- 46

Query: 480  XTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISNRLYL 659
               +  + W ++  +AA+TIRL L+ +V+  V    + KE+W+KL +L+ +K ++++LYL
Sbjct: 47   --KIDADKWNEMKAQAAATIRLSLSDSVMYQVMDEKSPKEIWDKLASLHMSKSLTSKLYL 104

Query: 660  KEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHMKPIL 839
            K+Q + L++ E S +  H+   N ++ +L  + VK++DEDKA+ L+ SLP SYEH+   L
Sbjct: 105  KQQLYGLQVQEESDLRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLPLSYEHVVTTL 164

Query: 840  MYGKETLIFAEVTGKLLSEE-RRLMSDGRTSTENSVAVAVSKGR-------KKDSKNVVC 995
             +GK+T+   E+   LL+ + RR   +  T      ++ V           K   K   C
Sbjct: 165  THGKDTVKTEEIISSLLARDLRRSKKNEATKASQGKSLLVKDKHDHEAGVSKSKEKGARC 224

Query: 996  WKCGEPGHTKRNC 1034
            +KC E GH +RNC
Sbjct: 225  YKCHEFGHIRRNC 237


>gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 262

 Score =  146 bits (369), Expect = 1e-37
 Identities = 82/197 (41%), Positives = 119/197 (60%), Gaps = 14/197 (7%)
 Frame = +3

Query: 486  SMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISNRLYLKE 665
            +M+DE W++LD +A S I+LCL+K VL  V   + A  LW KLE+LY  K ++N+L LKE
Sbjct: 23   NMTDEQWDELDEKALSAIQLCLSKEVLREVANETTAAALWLKLESLYMTKSLANKLRLKE 82

Query: 666  QFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHMKPILMY 845
            + +T+RM EG+ I  HL+  N II +LE I +KI+DEDKA+ LI+SLP +Y+H K I++Y
Sbjct: 83   RLYTIRMVEGTPIQSHLNEFNSIIMDLENIEIKIDDEDKAVLLIVSLPSTYKHFKEIMLY 142

Query: 846  -GKETLIFAEVTGKLLSEER------------RLMSDGRTSTENSVAVAVSKGRKKDSK- 983
               +TL F +V   LLS+E+             L   GRT  + S +   S+ + +  K 
Sbjct: 143  SNNDTLSFEDVKSNLLSKEKFDLDIHSEDKGEGLSVRGRTQEKGSTSNKKSRSKSRRRKT 202

Query: 984  NVVCWKCGEPGHTKRNC 1034
            N  C  C + GH   +C
Sbjct: 203  NKTCRYCKKFGHDISDC 219


>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
          Length = 478

 Score =  151 bits (382), Expect = 2e-37
 Identities = 88/267 (32%), Positives = 143/267 (53%)
 Frame = +3

Query: 297  MKFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXXXXX 476
            MKFD+ KFDG  NFGLWQ +VKD++ Q  + KALK                         
Sbjct: 88   MKFDLVKFDGFGNFGLWQTRVKDLLAQQEVSKALKGVKP--------------------- 126

Query: 477  XXTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISNRLY 656
                M D+D E++ L+AA+TIR CL+  ++ +V   ++ K +WEKLEA + +K ++N+ Y
Sbjct: 127  --AKMEDDDCEEMQLQAAATIRRCLSDQIMYHVMEETSPKIIWEKLEAQFMSKTLTNKRY 184

Query: 657  LKEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHMKPI 836
            LK++ + L+M EG+ ++ H++  N ++++L  + V+++DEDKA+ L+ SLP SYEH+   
Sbjct: 185  LKQKLYGLKMQEGADLTAHVNVFNQLVTDLVKMDVEVDDEDKAIVLLCSLPESYEHVM-- 242

Query: 837  LMYGKETLIFAEVTGKLLSEERRLMSDGRTSTENSVAVAVSKGRKKDSKNVVCWKCGEPG 1016
                           +   E     ++G    E+     V K +KK  K V C++C E G
Sbjct: 243  ---------------RKNKEGETSQAEGLLVKEDHAGHKVKKNKKK--KMVKCFRCDEWG 285

Query: 1017 HTKRNCQGGAGAANSSESKANIVIDED 1097
            H +R C    G A ++ + ++   D D
Sbjct: 286  HIRRECPTLKGKAKANVATSSNDSDSD 312


>gb|KYP67041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 325

 Score =  146 bits (369), Expect = 6e-37
 Identities = 92/280 (32%), Positives = 149/280 (53%), Gaps = 18/280 (6%)
 Frame = +3

Query: 291  NSMKFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXXX 470
            +S KFD++KF+G  +F LW++++K V++  G   AL+                       
Sbjct: 2    SSYKFDIDKFNGSNDFTLWKLKMKAVLVHQGCAAALEGADKLP----------------- 44

Query: 471  XXXXTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISNR 650
                T+M+D+  + +  +A S I L L   VL  V   + A  +W+ LE  +Q K ++NR
Sbjct: 45   ----TTMTDDVKKAMLEKAHSLILLSLTDEVLREVGEETTAAGMWKMLEDKFQKKSLTNR 100

Query: 651  LYLKEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHMK 830
            LY K++ +TL+M+E   + DHL   N II +L++IGVK++DED A+ L+ SLP SYE+  
Sbjct: 101  LYQKQRLYTLQMSENMSVRDHLDNFNRIILDLQSIGVKVDDEDLAIILLCSLPKSYENFI 160

Query: 831  PILMYGKETLIFAEVTGKLLSE--ERRLMSDGRTSTENSVAVAVSKGRKKD--------- 977
              ++YG++++    V   L S+  +RR++S   +S  + V + VS+GR  +         
Sbjct: 161  DTMLYGRDSITLNNVKDSLQSKKLKRRVVS---SSNVDDVGLTVSRGRSMERGNSSKGHT 217

Query: 978  -------SKNVVCWKCGEPGHTKRNCQGGAGAANSSESKA 1076
                   SK V C+KC E GH ++NC       NS+ S A
Sbjct: 218  RSNSLSKSKKVRCYKCKEVGHIRKNCPQLKKNRNSNASAA 257


>gb|KYP77941.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 270

 Score =  143 bits (360), Expect = 3e-36
 Identities = 84/260 (32%), Positives = 132/260 (50%), Gaps = 12/260 (4%)
 Frame = +3

Query: 291  NSMKFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXXX 470
            N++KF+V  FDGR +F LWQ  ++D ++Q GL  AL+                       
Sbjct: 2    NTLKFEVPLFDGRTDFTLWQCTIQDYLVQQGLDLALQDEKKP------------------ 43

Query: 471  XXXXTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISNR 650
                + + + DW  +  +A STIRL LA  +   V   ++ K+LW+ LE+ + +K ++NR
Sbjct: 44   ----SEIKESDWSTIQKKAVSTIRLALAPQIKVTVLKETSPKKLWDTLESKFASKTLTNR 99

Query: 651  LYLKEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHMK 830
            L +K   ++L+M EG  ++DH++  N ++S L   G  I+DE++AL L+ SLP S++ + 
Sbjct: 100  LMMKMDLYSLKMEEGGNVTDHINKFNEMVSRLLNAGETIKDEEQALLLLASLPKSFKPLV 159

Query: 831  PILMYGKETLIFAEVTGKLLSEERRLMSDGRTSTENSVAVAVSKGRKK------------ 974
              ++ GK TL   EV   L   +R  M  G  S  +S  +AV   RKK            
Sbjct: 160  QSMLAGKSTLNLDEVMSTLKESQR--MMGGEESFRDSHILAVDSDRKKKGDQLGRNSRSR 217

Query: 975  DSKNVVCWKCGEPGHTKRNC 1034
            D   V C  CG+ GH +  C
Sbjct: 218  DMSTVECHYCGQLGHIQMRC 237


>gb|KYP62517.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 267

 Score =  142 bits (359), Expect = 4e-36
 Identities = 84/259 (32%), Positives = 135/259 (52%), Gaps = 12/259 (4%)
 Frame = +3

Query: 294  SMKFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXXXX 473
            +MK DV  FDGRI+F LWQ  ++D ++Q GL  AL+                        
Sbjct: 3    TMKLDVPLFDGRIDFSLWQCTIQDYLVQQGLDCALEEEKPR------------------- 43

Query: 474  XXXTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISNRL 653
                 M D +W  +  +A STIRL LA  +   V   ++ ++LW  LE+ + +  ++NRL
Sbjct: 44   ----EMKDSEWSTIQKKAVSTIRLALAPQIKVTVLKETSPRKLWNLLESKFASTTLTNRL 99

Query: 654  YLKEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHMKP 833
             +K   ++L+M +   + DH++  N ++S L   G  I+DE++AL L+ SLP SY+ +  
Sbjct: 100  MMKMDLYSLKMEDEGNVFDHINKFNELVSRLMNAGETIKDEEQALLLLASLPKSYKSLVQ 159

Query: 834  ILMYGKETLIFAEVTGKLLSEERRLMSDGRTSTENSVAVAVS-KGRK-----------KD 977
             L+ GK TL+  EV  + L E +++M   ++S ++ + +A S +G+K           KD
Sbjct: 160  SLLAGKSTLLLDEVI-RALKENQQMMGGDKSSGDSQILLAKSERGKKYGDQHGRRFQPKD 218

Query: 978  SKNVVCWKCGEPGHTKRNC 1034
              NV C  CGE GH +  C
Sbjct: 219  MSNVQCHYCGEFGHIQFKC 237


>gb|KUM46798.1| hypothetical protein ABT39_MTgene6253 (mitochondrion) [Picea
           glauca]
          Length = 116

 Score =  137 bits (345), Expect = 6e-36
 Identities = 60/113 (53%), Positives = 91/113 (80%)
 Frame = +3

Query: 489 MSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISNRLYLKEQ 668
           MS+EDWE++D++A S+IR+CLA N + NV G   A  LW KLE+LYQ+K + NR+ LK +
Sbjct: 1   MSNEDWEEMDMKAVSSIRMCLADNFIFNVRGEKTASGLWAKLESLYQSKSLLNRILLKNR 60

Query: 669 FHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHM 827
            ++L+M EG+K+S+HL+T N I+S+LE+IGVK++DEDKA+ L+ +LP SY+++
Sbjct: 61  LYSLKMKEGAKVSEHLNTFNDILSQLESIGVKMDDEDKAVTLLCTLPDSYDNL 113


>gb|KOM55736.1| hypothetical protein LR48_Vigan10g162800 [Vigna angularis]
          Length = 249

 Score =  141 bits (356), Expect = 7e-36
 Identities = 82/258 (31%), Positives = 136/258 (52%), Gaps = 13/258 (5%)
 Frame = +3

Query: 300  KFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXXXXXX 479
            KFD+EKF+G  NFGLW+++++ ++IQ G  +ALK                          
Sbjct: 4    KFDIEKFNGSNNFGLWKIKMEAILIQQGCDEALKGELNMG-------------------- 43

Query: 480  XTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISNRLYL 659
               MS E+ + +  +A S I LCL    L  V     A  +W KLE+LY  + +++RL L
Sbjct: 44   -VGMSQEEKKRMIDKARSAIILCLGDKALREVAKEKTAAGIWAKLESLYMTRSLAHRLCL 102

Query: 660  KEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHMKPIL 839
            K+Q ++ +M +   I + L+  + I+ +LE I V++EDEDKA+ L+ +LP ++EH +  L
Sbjct: 103  KQQLYSFKMTDSRTIEEQLAEFSKIVDDLENIDVRLEDEDKAVILLNALPRTFEHFRDAL 162

Query: 840  MYGKETLI-FAEVTGKLLSEERRLMSDGRTSTENSVAVAVSKGRKKDS------------ 980
            +YGK+ +I   EV   + ++E + + D + + E +  +   KG+ K              
Sbjct: 163  LYGKDQVITLKEVVTSIRTKEFQKLQDSKATEEVASRLFSVKGKWKKQAGNGKKTKSEGV 222

Query: 981  KNVVCWKCGEPGHTKRNC 1034
            K V C+KC + GH K+ C
Sbjct: 223  KQVRCFKCQKMGHIKKYC 240


>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score =  150 bits (379), Expect = 8e-36
 Identities = 92/280 (32%), Positives = 145/280 (51%), Gaps = 14/280 (5%)
 Frame = +3

Query: 291  NSMKFDVEKFDGRINFGLWQVQVKDVMIQSGLHKALKXXXXXXXXXXXXXXXXXXXXXXX 470
            +S KF+VEKF+G  +F LW++++K +++Q    +A++                       
Sbjct: 2    SSQKFEVEKFNGSNDFTLWKLKMKALLVQQKCAQAIEGEETLP----------------- 44

Query: 471  XXXXTSMSDEDWEDLDLRAASTIRLCLAKNVLANVHGISNAKELWEKLEALYQAKGISNR 650
                  ++  + E++  RA S I L LA  VL  V   + A  LW K E+ YQ K ++NR
Sbjct: 45   ----VGLTAVEKEEVVSRAHSAILLSLADEVLREVADETTAVGLWRKFESKYQKKSLTNR 100

Query: 651  LYLKEQFHTLRMNEGSKISDHLSTLNGIISELEAIGVKIEDEDKALRLILSLPHSYEHMK 830
            LY K Q HTL+M+EG ++ DHL+  N II +L  +GVK+E+ED+A+ L+ SLP SYE+  
Sbjct: 101  LYQKRQLHTLKMSEGMQVRDHLNNFNRIILDLNGVGVKVEEEDQAMILLCSLPSSYENFV 160

Query: 831  PILMYGKETLIFAEVTGKLLSEERRLMSDGRTSTENSVAVAVSKGR----------KKDS 980
              +MYG++++   +V   L S+E + +  G         + VS+GR          K  S
Sbjct: 161  DTMMYGRBSISXNDVKDALQSKELQKLVSGSEEGSVETGLTVSRGRSMERNGGGRSKSXS 220

Query: 981  KNVVCWKC---GEPGHTKRNC-QGGAGAANSSESKANIVI 1088
            K+    +C    E GH ++NC Q   G    S   A +V+
Sbjct: 221  KSKAAMRCFHXKEKGHFRKNCPQRQKGIGXGSNGNAQVVV 260