BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00011594
         (5331 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposo...   320   e-112
gb|KYP47407.1| Retrovirus-related Pol polyprotein from transposo...   318   e-112
gb|KYP33249.1| Retrovirus-related Pol polyprotein from transposo...   319   e-112
gb|KYP38726.1| Retrovirus-related Pol polyprotein from transposo...   320   e-112
gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposo...   319   e-111
gb|KYP77961.1| Copia protein [Cajanus cajan]                          318   e-111
gb|AAN05371.1| Putative retroelement [Oryza sativa Japonica Grou...   312   e-110
emb|CAN72461.1| hypothetical protein VITISV_025872 [Vitis vinifera]   306   e-110
gb|KYP50151.1| Retrovirus-related Pol polyprotein from transposo...   309   e-109
gb|AAM94552.1| putative polyprotein [Oryza sativa Japonica Group]     310   e-109
gb|KYP32220.1| Copia protein [Cajanus cajan]                          312   e-109
gb|KYP56106.1| Copia protein [Cajanus cajan]                          309   e-109
emb|CAE03782.2| OSJNBa0063G07.6 [Oryza sativa Japonica Group]         309   e-109
emb|CAH66560.1| OSIGBa0113K06.6 [Oryza sativa Indica Group]           309   e-109
emb|CAN83181.1| hypothetical protein VITISV_013310 [Vitis vinifera]   298   e-108
gb|KYP66812.1| Retrovirus-related Pol polyprotein from transposo...   306   e-108
gb|KYP33754.1| Retrovirus-related Pol polyprotein from transposo...   305   e-108
gb|ABG66113.1| retrotransposon protein, putative, Ty1-copia subc...   306   e-108
gb|ABF97883.1| retrotransposon protein, putative, unclassified [...   306   e-107
gb|AAV31277.1| putative polyprotein [Oryza sativa Japonica Group]     306   e-107

>gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1533

 Score =  320 bits (819), Expect(2) = e-112
 Identities = 149/220 (67%), Positives = 180/220 (81%)
 Frame = -1

Query: 5052 KAKLLIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPK 4873
            K + +IGSLLYLTASRPDI FAV +CARFQ+ PKESHM + KRIL+YLKG   VGLWYPK
Sbjct: 1311 KYRGIIGSLLYLTASRPDIMFAVCLCARFQANPKESHMKSVKRILKYLKGTTNVGLWYPK 1370

Query: 4872 EGGFKLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGS 4693
                 L+GYSDSDY GCR+DRKSTSGTC +LG+ LVSW SKKQ  +A STAEAEYI AGS
Sbjct: 1371 GVSLSLIGYSDSDYAGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALSTAEAEYIAAGS 1430

Query: 4692 CCAQVLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEK 4513
            CCAQ+LWM+QQLRDY +E  +IP+ CDNTSAI +T+NP+LHSRTKHI++R+HF+RDHV++
Sbjct: 1431 CCAQILWMKQQLRDYGVELNKIPLRCDNTSAINLTKNPILHSRTKHIEIRHHFLRDHVQR 1490

Query: 4512 KDITLEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
             D  +E++ T KQLADIFTKPL   RF +L+ ELG+I  S
Sbjct: 1491 NDCAVEFVETSKQLADIFTKPLPRERFNQLRIELGIINES 1530



 Score =  118 bits (295), Expect(2) = e-112
 Identities = 58/97 (59%), Positives = 72/97 (74%)
 Frame = -3

Query: 5326 LLVQIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQTK 5147
            + VQIYVDDI+FGSTN  LC +F+  MQG+FEMSMMGEL FFL LQVKQM DGTFISQ+K
Sbjct: 1212 MYVQIYVDDIVFGSTNISLCKEFAKTMQGEFEMSMMGELTFFLGLQVKQMHDGTFISQSK 1271

Query: 5146 YTRDLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            Y  +L+KKF ME        ++ +  +D+D +G AVD
Sbjct: 1272 YCNELLKKFGMEGCKEAATPISNNCNLDLDEKGIAVD 1308


>gb|KYP47407.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1569

 Score =  318 bits (814), Expect(2) = e-112
 Identities = 148/217 (68%), Positives = 179/217 (82%)
 Frame = -1

Query: 5052 KAKLLIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPK 4873
            K + +IGSLLYLTASRPDI FAV +CARFQ+ PKESHM + KRIL+YLKG   VGLWYPK
Sbjct: 1347 KYRGIIGSLLYLTASRPDIMFAVCLCARFQANPKESHMKSVKRILKYLKGTTNVGLWYPK 1406

Query: 4872 EGGFKLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGS 4693
                 L+GYSDSD+ GCR+DRKSTSGTC +LG+ LVSW SKKQ  +A STAEAEYI AGS
Sbjct: 1407 GVSLSLIGYSDSDFAGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALSTAEAEYIAAGS 1466

Query: 4692 CCAQVLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEK 4513
            CCAQ+LWM+QQLRDY IE  +IP+ CDNTSAI +T+NP+LHSRTKHI++R+HF+RDHV++
Sbjct: 1467 CCAQILWMKQQLRDYGIELNKIPLRCDNTSAINLTKNPILHSRTKHIEIRHHFLRDHVQR 1526

Query: 4512 KDITLEYISTDKQLADIFTKPLCESRFEELKNELGLI 4402
             D  +E++ T KQLADIFTKPL   RF +L+ ELG+I
Sbjct: 1527 NDCVVEFVETTKQLADIFTKPLPRERFNQLRIELGII 1563



 Score =  119 bits (297), Expect(2) = e-112
 Identities = 57/97 (58%), Positives = 72/97 (74%)
 Frame = -3

Query: 5326 LLVQIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQTK 5147
            + VQIYVDDI+FGSTN  LC +F+  MQG+FEMSMMGEL FFL LQ+KQM DGTFISQ+K
Sbjct: 1248 MYVQIYVDDIVFGSTNSSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGTFISQSK 1307

Query: 5146 YTRDLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            Y  +L+KKF ME        ++ +  +D+D +G AVD
Sbjct: 1308 YCNELLKKFGMEGCKEAATPISNNCNLDLDEKGIAVD 1344


>gb|KYP33249.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1010

 Score =  319 bits (817), Expect(2) = e-112
 Identities = 149/220 (67%), Positives = 181/220 (82%)
 Frame = -1

Query: 5052 KAKLLIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPK 4873
            K + +IGSLLYLTASRPDI F V +CARFQ+ PKESHM + KRIL+YLKG   VGLWYPK
Sbjct: 788  KYRGIIGSLLYLTASRPDIMFVVCLCARFQANPKESHMKSVKRILKYLKGTTNVGLWYPK 847

Query: 4872 EGGFKLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGS 4693
                 L+GYSDSDYVGCR+DRKSTSGTC +LG+ LVSW SKKQ  +A STAEAEYI AGS
Sbjct: 848  GVSLSLIGYSDSDYVGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALSTAEAEYIAAGS 907

Query: 4692 CCAQVLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEK 4513
            CCAQ+LWM+QQL+DY  E  +IP+ CDNTSAI +T+NP+LHSRTKHI++R+HF+RDHV+K
Sbjct: 908  CCAQILWMKQQLKDYGTELNKIPLRCDNTSAINLTKNPILHSRTKHIEIRHHFLRDHVQK 967

Query: 4512 KDITLEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
             D  +E++ T+KQLADIFTKPL + RF +L+ ELG+I  S
Sbjct: 968  NDCVVEFVETNKQLADIFTKPLPKERFNQLRIELGIINES 1007



 Score =  117 bits (293), Expect(2) = e-112
 Identities = 57/97 (58%), Positives = 71/97 (73%)
 Frame = -3

Query: 5326 LLVQIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQTK 5147
            + VQIYVDDI+FGSTN  LC +F+  MQG+FEMSMMGEL FFL LQ+KQM DG FISQ+K
Sbjct: 689  MYVQIYVDDIVFGSTNLSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMSDGIFISQSK 748

Query: 5146 YTRDLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            Y  +L+KKF ME        ++ S  +D+D +G AVD
Sbjct: 749  YCNELLKKFGMEGCKEAATPISNSCNLDLDEKGIAVD 785


>gb|KYP38726.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 749

 Score =  320 bits (819), Expect(2) = e-112
 Identities = 149/220 (67%), Positives = 180/220 (81%)
 Frame = -1

Query: 5052 KAKLLIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPK 4873
            K + +IGSLLYLTASRPDI FAV +CARFQ+ PKESHM + KRIL+YLKG   VGLWYPK
Sbjct: 527  KYRGIIGSLLYLTASRPDIMFAVCLCARFQANPKESHMKSVKRILKYLKGTTNVGLWYPK 586

Query: 4872 EGGFKLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGS 4693
                 L+GYSDSDY GCR+DRKSTSGTC +LG+ LVSW SKKQ  +A STAEAEYI AGS
Sbjct: 587  GVSLSLIGYSDSDYAGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALSTAEAEYIAAGS 646

Query: 4692 CCAQVLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEK 4513
            CCAQ+LWM+QQLRDY +E  +IP+ CDNTSAI +T+NP+LHSRTKHI++R+HF+RDHV++
Sbjct: 647  CCAQILWMKQQLRDYGVELNKIPLRCDNTSAINLTKNPILHSRTKHIEIRHHFLRDHVQR 706

Query: 4512 KDITLEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
             D  +E++ T KQLADIFTKPL   RF +L+ ELG+I  S
Sbjct: 707  NDCVVEFVETSKQLADIFTKPLPRERFNQLRIELGIINES 746



 Score =  116 bits (290), Expect(2) = e-112
 Identities = 56/97 (57%), Positives = 71/97 (73%)
 Frame = -3

Query: 5326 LLVQIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQTK 5147
            + VQIYVDDI+FGSTN  LC +F+  MQG+FEMSMMGEL FFL LQ+KQM DG FISQ+K
Sbjct: 428  MYVQIYVDDIVFGSTNTSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGIFISQSK 487

Query: 5146 YTRDLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            Y  +L+KKF ME        ++ +  +D+D +G AVD
Sbjct: 488  YCNELLKKFGMEGCKEAATPISNNCNLDLDEKGIAVD 524


>gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1564

 Score =  319 bits (817), Expect(2) = e-111
 Identities = 149/220 (67%), Positives = 179/220 (81%)
 Frame = -1

Query: 5052 KAKLLIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPK 4873
            K + +IGSLLYLTASRPDI FAV +CARFQ+ PKESHM + KRIL+YLKG   VGLWYPK
Sbjct: 1342 KYRGIIGSLLYLTASRPDIMFAVCLCARFQANPKESHMKSVKRILKYLKGTTNVGLWYPK 1401

Query: 4872 EGGFKLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGS 4693
                 L+GYSDSDY GCR+DRKSTSGTC +LG+ LVSW SKKQ  +A STAEAEYI AGS
Sbjct: 1402 GVSLSLIGYSDSDYAGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALSTAEAEYIAAGS 1461

Query: 4692 CCAQVLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEK 4513
            CCAQ+LWM+QQLRDY +E  +IP+ CDNTSAI +T+NP+LHSRTKHI++R+HF+RDHV++
Sbjct: 1462 CCAQILWMKQQLRDYGVELNKIPLRCDNTSAINLTKNPILHSRTKHIEIRHHFLRDHVQR 1521

Query: 4512 KDITLEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
             D  +E++ T KQLADIFTKPL   RF  L+ ELG+I  S
Sbjct: 1522 NDCVVEFVETSKQLADIFTKPLPRERFNNLRIELGIINES 1561



 Score =  116 bits (290), Expect(2) = e-111
 Identities = 56/97 (57%), Positives = 71/97 (73%)
 Frame = -3

Query: 5326 LLVQIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQTK 5147
            + VQIYVDDI+FGSTN  LC +F+  MQG+FEMSMMGEL FFL LQ+KQM DG FISQ+K
Sbjct: 1243 MYVQIYVDDIVFGSTNTSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGIFISQSK 1302

Query: 5146 YTRDLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            Y  +L+KKF ME        ++ +  +D+D +G AVD
Sbjct: 1303 YCNELLKKFGMEGCKEAATPISNNCNLDLDEKGIAVD 1339


>gb|KYP77961.1| Copia protein [Cajanus cajan]
          Length = 656

 Score =  318 bits (815), Expect(2) = e-111
 Identities = 148/220 (67%), Positives = 179/220 (81%)
 Frame = -1

Query: 5052 KAKLLIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPK 4873
            K + +IGSLLYLTASRPDI F V +CARFQ+ PKESHM + KRIL+YLKG   VGLWYPK
Sbjct: 434  KYRGIIGSLLYLTASRPDIMFVVCLCARFQANPKESHMKSVKRILKYLKGTTNVGLWYPK 493

Query: 4872 EGGFKLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGS 4693
                 L+GYSDSDY GCR+DRKSTSGTC +LG+ LVSW SKKQ  +A STAEAEYI AGS
Sbjct: 494  GVSLSLIGYSDSDYAGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALSTAEAEYIAAGS 553

Query: 4692 CCAQVLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEK 4513
            CCAQ+LWM+QQLRDY +E  +IP+ CDNTSAI +T+NP+LHSRTKHI++R+HF+RDHV++
Sbjct: 554  CCAQILWMKQQLRDYGVELNKIPLRCDNTSAINLTKNPILHSRTKHIEIRHHFLRDHVQR 613

Query: 4512 KDITLEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
             D  +E++ T KQLADIFTKPL   RF +L+ ELG+I  S
Sbjct: 614  NDCVVEFVETSKQLADIFTKPLPRKRFNQLRIELGIINES 653



 Score =  116 bits (290), Expect(2) = e-111
 Identities = 56/97 (57%), Positives = 71/97 (73%)
 Frame = -3

Query: 5326 LLVQIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQTK 5147
            + VQIYVDDI+FGSTN  LC +F+  MQG+FEMSMMGEL FFL LQ+KQM DG FISQ+K
Sbjct: 335  MYVQIYVDDIVFGSTNTSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGIFISQSK 394

Query: 5146 YTRDLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            Y  +L+KKF ME        ++ +  +D+D +G AVD
Sbjct: 395  YCNELLKKFGMEGCKEAATPISNNCNLDLDEKGIAVD 431


>gb|AAN05371.1| Putative retroelement [Oryza sativa Japonica Group]
            gi|31431391|gb|AAP53179.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1299

 Score =  312 bits (800), Expect(2) = e-110
 Identities = 150/216 (69%), Positives = 175/216 (81%)
 Frame = -1

Query: 5040 LIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPKEGGF 4861
            +IGSLLYLTASRPDI F+V +CARFQ APKE H+ A KRILRYLK    +GLWYPK   F
Sbjct: 1081 MIGSLLYLTASRPDIMFSVCMCARFQVAPKECHLVAVKRILRYLKHSSIIGLWYPKGAKF 1140

Query: 4860 KLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGSCCAQ 4681
            KLVGYSDSDY GC+VDRKSTSG+CQMLG  LVSW SKKQNS+A STAEAEY+ AGSCCAQ
Sbjct: 1141 KLVGYSDSDYAGCKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQ 1200

Query: 4680 VLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEKKDIT 4501
            +LWM+Q L DY I   + P++CDN SAI I  NPV HSRTKHID+R+HF+RDHV K DI 
Sbjct: 1201 LLWMKQILLDYGISFTKTPLLCDNDSAIKIANNPVQHSRTKHIDIRHHFLRDHVVKSDIV 1260

Query: 4500 LEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
            + +I T+ QLADIFTKPL E+RF +L+NEL +I+ S
Sbjct: 1261 ISHIRTEDQLADIFTKPLDETRFCKLRNELNVIDFS 1296



 Score =  117 bits (294), Expect(2) = e-110
 Identities = 58/102 (56%), Positives = 76/102 (74%)
 Frame = -3

Query: 5317 QIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQTKYTR 5138
            QIYVDDIIFGSTN+  C +F ++M  +FEMSM+GEL FFL LQ+KQ+KDGTF+SQTKY +
Sbjct: 981  QIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLRLQIKQLKDGTFLSQTKYIK 1040

Query: 5137 DLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVDWIIALSHS 5012
            DL+K+F +E    +K  M T+  +D+D  GK VD  + L HS
Sbjct: 1041 DLLKRFGLEDAKPIKTPMVTNGHLDLDEGGKPVD--LKLYHS 1080


>emb|CAN72461.1| hypothetical protein VITISV_025872 [Vitis vinifera]
          Length = 887

 Score =  306 bits (784), Expect(2) = e-110
 Identities = 138/215 (64%), Positives = 178/215 (82%)
 Frame = -1

Query: 5040 LIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPKEGGF 4861
            +IGSLLYLT SRPDI ++V +CARFQS PK+SH++A KRILRYLKG  ++GLWYPK   F
Sbjct: 673  MIGSLLYLTTSRPDIMYSVCLCARFQSCPKKSHLSAVKRILRYLKGTMDIGLWYPKGDNF 732

Query: 4860 KLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGSCCAQ 4681
            +L+GYSD+D+ GC+V+RKSTS TC  LG+ LVSW+SKKQNS+A ST EAEYI  G CCAQ
Sbjct: 733  ELIGYSDADFDGCKVERKSTSDTCHFLGHSLVSWYSKKQNSVALSTVEAEYIAVGLCCAQ 792

Query: 4680 VLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEKKDIT 4501
            +LWM+Q L D+++  + +PI CDNTSAI I++NPV HSRTKHI++R+HF+RDH +K DIT
Sbjct: 793  ILWMKQTLSDFNLIFEHVPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLRDHAQKGDIT 852

Query: 4500 LEYISTDKQLADIFTKPLCESRFEELKNELGLIEL 4396
            LE++ST  QLADIFTKPL E +F +++ +LG+I L
Sbjct: 853  LEFVSTKDQLADIFTKPLSEEQFVDIRRQLGVISL 887



 Score =  123 bits (309), Expect(2) = e-110
 Identities = 60/98 (61%), Positives = 78/98 (79%)
 Frame = -3

Query: 5329 ILLVQIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQT 5150
            +LLVQIYVDDIIFG+TN  LC+ FS  M  +FEMSMMGEL FFL LQ+KQ+K+GTFI+Q 
Sbjct: 569  MLLVQIYVDDIIFGATNVSLCEGFSKCMHSEFEMSMMGELNFFLGLQIKQLKEGTFINQA 628

Query: 5149 KYTRDLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            KY RDL+K+F+ME   ++K  M++S K+DMD + K V+
Sbjct: 629  KYIRDLLKRFNMEEAKTMKTPMSSSIKLDMDEKCKPVN 666


>gb|KYP50151.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1006

 Score =  309 bits (792), Expect(2) = e-109
 Identities = 145/220 (65%), Positives = 177/220 (80%)
 Frame = -1

Query: 5052 KAKLLIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPK 4873
            K + +IGSLLYLTASRPDI  AV +CARFQ+ PKESHM + KRIL+YLKG   VGLWYPK
Sbjct: 784  KYRGIIGSLLYLTASRPDIMLAVCLCARFQANPKESHMKSVKRILKYLKGTTNVGLWYPK 843

Query: 4872 EGGFKLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGS 4693
                 L+GYSDSDY GC +DRKSTSGT  +LG+ LVSW S+KQ  +A STAEAEYI AGS
Sbjct: 844  GVSLSLIGYSDSDYAGCGLDRKSTSGTYHLLGSALVSWHSRKQACVALSTAEAEYIAAGS 903

Query: 4692 CCAQVLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEK 4513
            CCAQ+LWM+QQLRDY +E  +IP+ CDNTSAI +T+NP+LHSRTKHI++R+HF+RDHV++
Sbjct: 904  CCAQILWMKQQLRDYGVELNKIPLRCDNTSAINLTKNPILHSRTKHIEIRHHFLRDHVQR 963

Query: 4512 KDITLEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
             D  +E++ T KQLADIFTKPL   RF +L+ ELG+I  S
Sbjct: 964  NDCVVEFVETSKQLADIFTKPLPRERFNQLRIELGIINES 1003



 Score =  119 bits (297), Expect(2) = e-109
 Identities = 57/97 (58%), Positives = 72/97 (74%)
 Frame = -3

Query: 5326 LLVQIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQTK 5147
            + VQIYVDDI+FGSTN  LC +F+  MQG+FEMSMMGEL FFL LQ+KQM DGTFISQ+K
Sbjct: 685  MYVQIYVDDIVFGSTNSSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGTFISQSK 744

Query: 5146 YTRDLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            Y  +L+KKF ME        ++ +  +D+D +G AVD
Sbjct: 745  YCNELLKKFGMEGCKEATTPISNNCNLDLDEKGIAVD 781


>gb|AAM94552.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1584

 Score =  310 bits (794), Expect(2) = e-109
 Identities = 148/216 (68%), Positives = 174/216 (80%)
 Frame = -1

Query: 5040 LIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPKEGGF 4861
            +IGSLLYLTASRPDI F+V +CARFQ+APKE H+ A KRILRYLK    +GLWYPK   F
Sbjct: 1366 MIGSLLYLTASRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYPKGAKF 1425

Query: 4860 KLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGSCCAQ 4681
            KLVGYSDSDY  C+VDRKSTSG+CQMLG  LVSW SKKQNS+A STAEAEY+ AGSCCAQ
Sbjct: 1426 KLVGYSDSDYASCKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQ 1485

Query: 4680 VLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEKKDIT 4501
            +LWM+Q L DY I   + P++CDN  AI I  NPV HSRTKHID+R+HF+RDHV K DI 
Sbjct: 1486 LLWMKQTLLDYGISFTKTPLLCDNDRAIKIANNPVQHSRTKHIDIRHHFLRDHVTKCDIV 1545

Query: 4500 LEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
            + +I T+ QLADIFTKPL E+RF +L+NEL +I+ S
Sbjct: 1546 ISHIRTEDQLADIFTKPLNETRFCKLRNELNVIDFS 1581



 Score =  117 bits (293), Expect(2) = e-109
 Identities = 55/94 (58%), Positives = 72/94 (76%)
 Frame = -3

Query: 5317 QIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQTKYTR 5138
            QIYVDDIIFGSTN+  C +F ++M  +FEMSM+GEL FFL LQ+KQ+KDGTF+SQTKY +
Sbjct: 1266 QIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELNFFLGLQIKQLKDGTFVSQTKYIK 1325

Query: 5137 DLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            DL+K+F +E    +K  M T+  +D+D  GK VD
Sbjct: 1326 DLLKRFGLEDAKPIKTPMATNGHLDLDKGGKPVD 1359


>gb|KYP32220.1| Copia protein [Cajanus cajan]
          Length = 518

 Score =  312 bits (799), Expect(2) = e-109
 Identities = 146/220 (66%), Positives = 176/220 (80%)
 Frame = -1

Query: 5052 KAKLLIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPK 4873
            K + +IGSLLYLTASRPDI F V +CARFQ+ PKESHM + KRIL+YLKG   VGLWYPK
Sbjct: 296  KYRGIIGSLLYLTASRPDIMFVVCLCARFQANPKESHMKSVKRILKYLKGTTNVGLWYPK 355

Query: 4872 EGGFKLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGS 4693
                 L+GYSDS+Y GCR+DRKSTSGTC +LG+ LVSW SKKQ  +A S AEAEYI  GS
Sbjct: 356  GVSLSLIGYSDSNYAGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALSIAEAEYIAVGS 415

Query: 4692 CCAQVLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEK 4513
            CCAQ+LWM+QQLRDY  E  +IP+ CDNTSAI +T+NP+LHSRTKHI++R+HF+RDHV+K
Sbjct: 416  CCAQILWMKQQLRDYGTELNKIPLRCDNTSAINLTKNPILHSRTKHIEIRHHFLRDHVQK 475

Query: 4512 KDITLEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
             D  +E++ T KQLADIFTKPL   RF +L+ ELG+I  S
Sbjct: 476  NDCVVEFVETSKQLADIFTKPLPRERFNQLRIELGIINES 515



 Score =  115 bits (287), Expect(2) = e-109
 Identities = 55/97 (56%), Positives = 71/97 (73%)
 Frame = -3

Query: 5326 LLVQIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQTK 5147
            + VQIYVDDI+FGSTN  LC +F+  MQG+FEMSMMGEL FFL LQ+KQM DG FI+Q+K
Sbjct: 197  MYVQIYVDDIVFGSTNVSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMSDGIFITQSK 256

Query: 5146 YTRDLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            Y  +L+KKF ME        ++ +  +D+D +G AVD
Sbjct: 257  YCNELLKKFGMEGCKEAATPISNTCNLDLDEKGIAVD 293


>gb|KYP56106.1| Copia protein [Cajanus cajan]
          Length = 327

 Score =  309 bits (791), Expect(2) = e-109
 Identities = 143/222 (64%), Positives = 179/222 (80%)
 Frame = -1

Query: 5058 MQKAKLLIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWY 4879
            ++K + +IGSLLYL+ASRPDI F+V +CAR+QS PKESH++A KRI+RYL G   +GLWY
Sbjct: 102  VKKYRGMIGSLLYLSASRPDIMFSVCLCARYQSNPKESHLSAVKRIMRYLLGTTNLGLWY 161

Query: 4878 PKEGGFKLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVA 4699
            PK   F LVGYSDSD+ GC+ DRKSTSGTC  +G+ LVSW SKKQNS+A STAEAEYI A
Sbjct: 162  PKNMPFNLVGYSDSDFAGCKTDRKSTSGTCHFIGSALVSWHSKKQNSVALSTAEAEYIAA 221

Query: 4698 GSCCAQVLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHV 4519
            GSCCAQ+LWM+QQL DY +    IPI CDNTSAI +++NPVLHSRTKHI++R+HF+RDHV
Sbjct: 222  GSCCAQILWMKQQLSDYGLSLDHIPIKCDNTSAINLSKNPVLHSRTKHIEIRHHFLRDHV 281

Query: 4518 EKKDITLEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
            +K D  LE++ T  QLADIFTKPL +  F  ++ ELG+++ S
Sbjct: 282  QKGDCVLEFVETKNQLADIFTKPLPKENFFSIRQELGILDSS 323



 Score =  118 bits (295), Expect(2) = e-109
 Identities = 58/98 (59%), Positives = 76/98 (77%)
 Frame = -3

Query: 5329 ILLVQIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQT 5150
            ILLVQIYVDDIIFG+TN  LC +FSN MQ +FEMSMMGEL FFL LQ++Q K+G FI+Q+
Sbjct: 4    ILLVQIYVDDIIFGATNDYLCKEFSNDMQSEFEMSMMGELNFFLGLQIRQTKNGIFINQS 63

Query: 5149 KYTRDLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            KY ++L+K+F ME   S+   M+T+  +D D  GK++D
Sbjct: 64   KYCKELLKRFGMENAKSMATPMSTTCYLDKDEVGKSID 101


>emb|CAE03782.2| OSJNBa0063G07.6 [Oryza sativa Japonica Group]
          Length = 1539

 Score =  309 bits (791), Expect(2) = e-109
 Identities = 148/216 (68%), Positives = 174/216 (80%)
 Frame = -1

Query: 5040 LIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPKEGGF 4861
            +IGSLLYLTASRPDI F+V +CA FQ+APKE H+ A KRILRYLK    +GLWYPK   F
Sbjct: 1321 MIGSLLYLTASRPDIMFSVCMCAWFQAAPKECHLVAVKRILRYLKYSSTIGLWYPKGAKF 1380

Query: 4860 KLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGSCCAQ 4681
            KLVGYSDSDY GC+VDR STSG+CQMLG  LVSW SKKQNS+A STAEAEY+ AGSCCAQ
Sbjct: 1381 KLVGYSDSDYAGCKVDRNSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQ 1440

Query: 4680 VLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEKKDIT 4501
            +LWM+Q L DY I   + P++CDN SAI I  NPV HSRTKHID+R+HF+RDHV K DI 
Sbjct: 1441 LLWMKQTLLDYGISFTKTPLLCDNDSAIKIANNPVQHSRTKHIDIRHHFLRDHVAKCDIV 1500

Query: 4500 LEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
            + +I T+ QLADIFTKPL E+RF +L+NEL +I+ S
Sbjct: 1501 ISHIRTEDQLADIFTKPLDETRFCKLRNELNVIDFS 1536



 Score =  117 bits (294), Expect(2) = e-109
 Identities = 55/94 (58%), Positives = 72/94 (76%)
 Frame = -3

Query: 5317 QIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQTKYTR 5138
            QIYVDDIIFGSTN+  C +F ++M  +FEMSM+GEL FFL LQ+KQ+KDGTF+SQTKY +
Sbjct: 1221 QIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLKDGTFVSQTKYIK 1280

Query: 5137 DLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            DL+K+F +E    +K  M T+  +D+D  GK VD
Sbjct: 1281 DLLKRFGLEDAKPIKTPMATNGHLDLDEGGKPVD 1314


>emb|CAH66560.1| OSIGBa0113K06.6 [Oryza sativa Indica Group]
          Length = 1539

 Score =  309 bits (791), Expect(2) = e-109
 Identities = 148/216 (68%), Positives = 174/216 (80%)
 Frame = -1

Query: 5040 LIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPKEGGF 4861
            +IGSLLYLTASRPDI F+V +CA FQ+APKE H+ A KRILRYLK    +GLWYPK   F
Sbjct: 1321 MIGSLLYLTASRPDIMFSVCMCAWFQAAPKECHLVAVKRILRYLKYSSTIGLWYPKGAKF 1380

Query: 4860 KLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGSCCAQ 4681
            KLVGYSDSDY GC+VDR STSG+CQMLG  LVSW SKKQNS+A STAEAEY+ AGSCCAQ
Sbjct: 1381 KLVGYSDSDYAGCKVDRNSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQ 1440

Query: 4680 VLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEKKDIT 4501
            +LWM+Q L DY I   + P++CDN SAI I  NPV HSRTKHID+R+HF+RDHV K DI 
Sbjct: 1441 LLWMKQTLLDYGISFTKTPLLCDNDSAIKIANNPVQHSRTKHIDIRHHFLRDHVAKCDIV 1500

Query: 4500 LEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
            + +I T+ QLADIFTKPL E+RF +L+NEL +I+ S
Sbjct: 1501 ISHIRTEDQLADIFTKPLDETRFCKLRNELNVIDFS 1536



 Score =  117 bits (294), Expect(2) = e-109
 Identities = 55/94 (58%), Positives = 72/94 (76%)
 Frame = -3

Query: 5317 QIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQTKYTR 5138
            QIYVDDIIFGSTN+  C +F ++M  +FEMSM+GEL FFL LQ+KQ+KDGTF+SQTKY +
Sbjct: 1221 QIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLKDGTFVSQTKYIK 1280

Query: 5137 DLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            DL+K+F +E    +K  M T+  +D+D  GK VD
Sbjct: 1281 DLLKRFGLEDAKPIKTPMATNGHLDLDEGGKPVD 1314


>emb|CAN83181.1| hypothetical protein VITISV_013310 [Vitis vinifera]
          Length = 455

 Score =  298 bits (764), Expect(2) = e-108
 Identities = 137/213 (64%), Positives = 175/213 (82%)
 Frame = -1

Query: 5040 LIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPKEGGF 4861
            +IGSLLYLTASRPDI +++ +CARFQS PKESH++A KRILRYLKG  ++GLWYPK   F
Sbjct: 241  MIGSLLYLTASRPDIMYSICLCARFQSCPKESHLSAVKRILRYLKGIMDIGLWYPKGDNF 300

Query: 4860 KLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGSCCAQ 4681
            +L+GY D+D+ GC+V+RKSTS TC  LG+ LVSW SKKQNSIA STAEAEYI AG  CAQ
Sbjct: 301  ELIGYLDADFAGCKVERKSTSDTCHFLGHSLVSWHSKKQNSIALSTAEAEYIAAGLYCAQ 360

Query: 4680 VLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEKKDIT 4501
            +LWM+Q L D+++  + +PI CDNTSAI I++N V HSRTKHI++R+HF+RDH +K DIT
Sbjct: 361  ILWMKQTLSDFNLIFEHVPIKCDNTSAINISKNLVQHSRTKHIEIRHHFLRDHAQKGDIT 420

Query: 4500 LEYISTDKQLADIFTKPLCESRFEELKNELGLI 4402
            LE++ST  QL DIFTKPL E +F +++ +LG+I
Sbjct: 421  LEFVSTKDQLVDIFTKPLSEEQFVDIRRQLGVI 453



 Score =  127 bits (318), Expect(2) = e-108
 Identities = 59/98 (60%), Positives = 80/98 (81%)
 Frame = -3

Query: 5329 ILLVQIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQT 5150
            +LLVQIYVDDIIFG+TN  LC++FS  M  +FEMSMMGEL FF+ LQ+KQ+K+GTFI+Q 
Sbjct: 137  MLLVQIYVDDIIFGATNVSLCEEFSKCMHSEFEMSMMGELNFFIGLQIKQLKEGTFINQA 196

Query: 5149 KYTRDLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            KY RDL+K+F+ME   ++K  M++S K+DMD +GK ++
Sbjct: 197  KYIRDLLKRFNMEEAKTMKTPMSSSIKLDMDXKGKLIN 234


>gb|KYP66812.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 900

 Score =  306 bits (783), Expect(2) = e-108
 Identities = 142/222 (63%), Positives = 178/222 (80%)
 Frame = -1

Query: 5058 MQKAKLLIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWY 4879
            ++K + +IGSLLYL+ASRPDI F+V +CAR+QS PKESH++A KRI+R L G   +GLWY
Sbjct: 675  VKKYRGMIGSLLYLSASRPDIMFSVCLCARYQSNPKESHLSAVKRIMRCLLGTTNLGLWY 734

Query: 4878 PKEGGFKLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVA 4699
            PK   F LVGYSDSD+ GC+ DRKSTSGTC  +G+ LVSW SKKQNS+A STAEAEYI A
Sbjct: 735  PKNMPFNLVGYSDSDFAGCKTDRKSTSGTCHFIGSALVSWHSKKQNSVALSTAEAEYIAA 794

Query: 4698 GSCCAQVLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHV 4519
            GSCCAQ+LWM+QQL DY +    IPI CDNTSAI +++NPVLHSRTKHI++R+HF+RDHV
Sbjct: 795  GSCCAQILWMKQQLSDYGLSLDHIPIKCDNTSAINLSKNPVLHSRTKHIEIRHHFLRDHV 854

Query: 4518 EKKDITLEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
            +K D  LE++ T  QLADIFTKPL +  F  ++ ELG+++ S
Sbjct: 855  QKGDYVLEFVETKNQLADIFTKPLPKENFFSIRQELGILDYS 896



 Score =  118 bits (295), Expect(2) = e-108
 Identities = 58/98 (59%), Positives = 76/98 (77%)
 Frame = -3

Query: 5329 ILLVQIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQT 5150
            ILLVQIYVDDIIFG+TN  LC +FSN MQ +FEMSMMGEL FFL LQ++Q K+G FI+Q+
Sbjct: 577  ILLVQIYVDDIIFGATNDYLCKEFSNDMQSEFEMSMMGELNFFLGLQIRQTKNGIFINQS 636

Query: 5149 KYTRDLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            KY ++L+K+F ME   S+   M+T+  +D D  GK++D
Sbjct: 637  KYCKELLKRFGMENAKSMATPMSTTCYLDKDEVGKSID 674


>gb|KYP33754.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1011

 Score =  305 bits (782), Expect(2) = e-108
 Identities = 142/222 (63%), Positives = 176/222 (79%)
 Frame = -1

Query: 5058 MQKAKLLIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWY 4879
            ++K + +IGSLLYL+ASRPDI F+V  CAR+QS PKESH++A KRI+RYL     +GLWY
Sbjct: 786  VKKYRGMIGSLLYLSASRPDIMFSVCFCARYQSNPKESHLSAVKRIMRYLLRTTNLGLWY 845

Query: 4878 PKEGGFKLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVA 4699
            PK   F LVGYSDSD+ GC+ DRKSTSGTC  +G+ LVSW SKKQNS+A STAEAEYI A
Sbjct: 846  PKNMSFNLVGYSDSDFAGCKTDRKSTSGTCHFIGSALVSWHSKKQNSVALSTAEAEYIAA 905

Query: 4698 GSCCAQVLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHV 4519
            GSCCAQ+LWM+QQL DY +    IPI CDNTSAI +++NPVLHSRTKHI++R+HF+RDHV
Sbjct: 906  GSCCAQILWMKQQLSDYGLSLDHIPIKCDNTSAINLSKNPVLHSRTKHIEIRHHFLRDHV 965

Query: 4518 EKKDITLEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
            +K D  LE++ T  QLADIFTKPL +  F  ++ ELG ++ S
Sbjct: 966  QKGDCVLEFVETKNQLADIFTKPLPKENFFSIRQELGFLDYS 1007



 Score =  118 bits (295), Expect(2) = e-108
 Identities = 58/98 (59%), Positives = 76/98 (77%)
 Frame = -3

Query: 5329 ILLVQIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQT 5150
            ILLVQIYVDDIIFG+TN  LC +FSN MQ +FEMSMMGEL FFL LQ++Q K+G FI+Q+
Sbjct: 688  ILLVQIYVDDIIFGATNDYLCKEFSNDMQSEFEMSMMGELNFFLGLQIRQTKNGIFINQS 747

Query: 5149 KYTRDLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            KY ++L+K+F ME   S+   M+T+  +D D  GK++D
Sbjct: 748  KYCKELLKRFGMENAKSMATPMSTTCYLDKDEVGKSID 785


>gb|ABG66113.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2112

 Score =  306 bits (783), Expect(2) = e-108
 Identities = 146/210 (69%), Positives = 170/210 (80%)
 Frame = -1

Query: 5040 LIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPKEGGF 4861
            +IGSLLYLTASRPDI F+V +CARFQ+APKE H+ A KRILRYLK    +GLWYPK   F
Sbjct: 1366 MIGSLLYLTASRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYPKGAKF 1425

Query: 4860 KLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGSCCAQ 4681
            KLVGYSDSDY  C+VDRKSTSG+CQMLG  LVSW SKKQNS+A STAEAEY+ AGSCCAQ
Sbjct: 1426 KLVGYSDSDYASCKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQ 1485

Query: 4680 VLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEKKDIT 4501
            +LWM+Q L DY I   + P++CDN  AI I  NPV HSRTKHID+R+HF+RDHV K DI 
Sbjct: 1486 LLWMKQTLLDYGISFTKTPLLCDNDRAIKIANNPVQHSRTKHIDIRHHFLRDHVTKCDIV 1545

Query: 4500 LEYISTDKQLADIFTKPLCESRFEELKNEL 4411
            + +I T+ QLADIFTKPL E+RF +L+NEL
Sbjct: 1546 ISHIRTEDQLADIFTKPLNETRFCKLRNEL 1575



 Score =  117 bits (293), Expect(2) = e-108
 Identities = 55/94 (58%), Positives = 72/94 (76%)
 Frame = -3

Query: 5317 QIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQTKYTR 5138
            QIYVDDIIFGSTN+  C +F ++M  +FEMSM+GEL FFL LQ+KQ+KDGTF+SQTKY +
Sbjct: 1266 QIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELNFFLGLQIKQLKDGTFVSQTKYIK 1325

Query: 5137 DLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            DL+K+F +E    +K  M T+  +D+D  GK VD
Sbjct: 1326 DLLKRFGLEDAKPIKTPMATNGHLDLDKGGKPVD 1359


>gb|ABF97883.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1441

 Score =  306 bits (783), Expect(2) = e-107
 Identities = 146/216 (67%), Positives = 173/216 (80%)
 Frame = -1

Query: 5040 LIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPKEGGF 4861
            +IGSLLYLTASRPDI F+V +CARFQ+ PKE H+ A KRI RYLK    +GLWYPK   F
Sbjct: 1223 MIGSLLYLTASRPDIMFSVYMCARFQATPKECHLVAVKRIPRYLKHSSTIGLWYPKCAKF 1282

Query: 4860 KLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGSCCAQ 4681
            KLVGY DSDY GC+VDRKSTS +CQMLG  LVSW SKKQNS+A STAEAEY+ AGSCCAQ
Sbjct: 1283 KLVGYFDSDYAGCKVDRKSTSDSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQ 1342

Query: 4680 VLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEKKDIT 4501
            +LWM+Q L DY I   + P++CDN SAI I  NPV HSRTKHID+R+HF+RDHV+K DI 
Sbjct: 1343 LLWMKQTLLDYGISFTKTPLLCDNDSAIKIANNPVQHSRTKHIDIRHHFLRDHVDKCDIV 1402

Query: 4500 LEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
            + +I T+ QLADIFTKPL E+RF +L+NEL +I+ S
Sbjct: 1403 ISHIRTENQLADIFTKPLDETRFCKLRNELNVIDFS 1438



 Score =  116 bits (290), Expect(2) = e-107
 Identities = 55/94 (58%), Positives = 71/94 (75%)
 Frame = -3

Query: 5317 QIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQTKYTR 5138
            QIYVDDIIFGSTN+  C +F ++M  +FEMSM+GEL FFL LQ+KQ+KDGTF+SQTKY +
Sbjct: 1123 QIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLKDGTFVSQTKYIK 1182

Query: 5137 DLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            DL+K+F +E     K  M T+  +D+D  GK VD
Sbjct: 1183 DLLKRFGLEDAKPTKTPMATNRHLDLDEGGKPVD 1216


>gb|AAV31277.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1577

 Score =  306 bits (783), Expect(2) = e-107
 Identities = 145/216 (67%), Positives = 171/216 (79%)
 Frame = -1

Query: 5040 LIGSLLYLTASRPDITFAVGVCARFQSAPKESHMTAAKRILRYLKGCQEVGLWYPKEGGF 4861
            +IGSLLYLT SRPDI F+V +CARFQ+APKE H+ A KRILRYLK    +GLWYPK   F
Sbjct: 1359 MIGSLLYLTVSRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYPKGAKF 1418

Query: 4860 KLVGYSDSDYVGCRVDRKSTSGTCQMLGNRLVSWFSKKQNSIATSTAEAEYIVAGSCCAQ 4681
            KLVGYSD DY GC+VDRKSTS +CQMLG  LVSW SKKQNS+A STAE EY+ AGSCCAQ
Sbjct: 1419 KLVGYSDPDYAGCKVDRKSTSSSCQMLGRSLVSWSSKKQNSVALSTAETEYVSAGSCCAQ 1478

Query: 4680 VLWMRQQLRDYDIEEKEIPIMCDNTSAIAITQNPVLHSRTKHIDVRYHFIRDHVEKKDIT 4501
            +LWM+Q L DY I   + P++CDN  AI I  NPV HSRTKHID+R+HF+RDHV K DI 
Sbjct: 1479 LLWMKQTLLDYGISFTKTPLLCDNDGAIKIANNPVQHSRTKHIDIRHHFLRDHVAKCDIV 1538

Query: 4500 LEYISTDKQLADIFTKPLCESRFEELKNELGLIELS 4393
            + +I T+ QLADIFTKPL E+RF +L+NEL +I+ S
Sbjct: 1539 ISHIRTEDQLADIFTKPLDETRFCKLRNELNIIDFS 1574



 Score =  115 bits (289), Expect(2) = e-107
 Identities = 54/94 (57%), Positives = 72/94 (76%)
 Frame = -3

Query: 5317 QIYVDDIIFGSTNKELCDKFSNLMQGKFEMSMMGELIFFLCLQVKQMKDGTFISQTKYTR 5138
            QIYVDDIIFGSTN+  C +F ++M  +FEMSM+GEL FFL LQ+KQ+K+GTF+SQTKY +
Sbjct: 1259 QIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLKNGTFVSQTKYIK 1318

Query: 5137 DLMKKFDMEVKSSVKIHMNTSAKMDMDAEGKAVD 5036
            DL+K+F +E    +K  M T+  +D+D  GK VD
Sbjct: 1319 DLLKRFGLEDAKPIKTPMATNGHLDLDEGGKPVD 1352