BLASTX nr result

ID: Rehmannia27_contig00010891 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00010891
         (529 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011087927.1| PREDICTED: RING-H2 finger protein ATL52-like...   103   8e-23
ref|XP_002522602.1| PREDICTED: RING-H2 finger protein ATL54 [Ric...    63   1e-08
ref|XP_007042886.1| RING/U-box superfamily protein, putative [Th...    60   1e-07
ref|XP_012069169.1| PREDICTED: RING-H2 finger protein ATL52-like...    59   2e-07
emb|CDO97409.1| unnamed protein product [Coffea canephora]             58   6e-07
ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vit...    57   1e-06

>ref|XP_011087927.1| PREDICTED: RING-H2 finger protein ATL52-like [Sesamum indicum]
          Length = 492

 Score =  103 bits (257), Expect = 8e-23
 Identities = 70/139 (50%), Positives = 89/139 (64%), Gaps = 23/139 (16%)
 Frame = -3

Query: 527 IEDD-TVSLAENGPKINE----EEGNSDTGGLDGIQPLRRSISMDYLSV----------F 393
           IED  + SLAE G K+NE    +EGN D  GLDG+QP+RRS+S+D LS           F
Sbjct: 354 IEDHGSASLAETGLKMNENLGEDEGNRDRQGLDGVQPMRRSVSVDSLSASMISAAVANAF 413

Query: 392 PGQSDGN----LVEVKESSTHGVVTKRVGFNQGLLRLIGSPLIERSSIQTGSCSIKRSVS 225
            GQ + N    +VE+KE  T GV+ KR GFNQ LLRL+GSP I RS+ QTG  S+KRS+S
Sbjct: 414 SGQPNSNSGKQIVELKEP-TVGVIAKRAGFNQSLLRLVGSPSIGRST-QTGDSSLKRSLS 471

Query: 224 CSANV----HSSANQN*VI 180
           CSA +     SS ++N V+
Sbjct: 472 CSAKLLLSRDSSRHRNSVV 490


>ref|XP_002522602.1| PREDICTED: RING-H2 finger protein ATL54 [Ricinus communis]
           gi|223538078|gb|EEF39689.1| ring finger protein,
           putative [Ricinus communis]
          Length = 378

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 45/99 (45%), Positives = 56/99 (56%), Gaps = 14/99 (14%)
 Frame = -3

Query: 455 GGLDGIQPLRRSISMDYLSVF----------PGQSDGN----LVEVKESSTHGVVTKRVG 318
           G  +GIQP+RRS+S+D LS F          P +SD N    LV   ESS   +V KRVG
Sbjct: 270 GEEEGIQPIRRSVSLDSLSAFKISQALVSVCPVESDRNSRTGLVNESESSME-IVPKRVG 328

Query: 317 FNQGLLRLIGSPLIERSSIQTGSCSIKRSVSCSANVHSS 201
            NQ LL+ + S  I R S+Q G  SIKRS+SC   +  S
Sbjct: 329 SNQSLLKFMASSSIGR-SLQIGPSSIKRSLSCGGKLFLS 366


>ref|XP_007042886.1| RING/U-box superfamily protein, putative [Theobroma cacao]
           gi|508706821|gb|EOX98717.1| RING/U-box superfamily
           protein, putative [Theobroma cacao]
          Length = 383

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 14/102 (13%)
 Frame = -3

Query: 482 NEEEGNSDTGGLDGIQPLRRSISMDYLSV----------FP----GQSDGNLVEVKESST 345
           NE +    +G  DGIQP+RRS+S+D L+           FP    G SD  L + KESS 
Sbjct: 262 NERKTGESSGVEDGIQPMRRSVSLDSLAASQISHAIANGFPEGSSGNSDNELAKGKESSV 321

Query: 344 HGVVTKRVGFNQGLLRLIGSPLIERSSIQTGSCSIKRSVSCS 219
             +VT+R   NQGLLRL+    + R S+Q+    +KRS SC+
Sbjct: 322 R-IVTRRTAGNQGLLRLMCHSSMGR-SLQSRPIFMKRSFSCN 361


>ref|XP_012069169.1| PREDICTED: RING-H2 finger protein ATL52-like [Jatropha curcas]
           gi|643734091|gb|KDP40934.1| hypothetical protein
           JCGZ_24933 [Jatropha curcas]
          Length = 379

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
 Frame = -3

Query: 455 GGLDGIQPLRRSISMDYLSVF----------PGQSDGN--LVEVKES-STHGVVTKRVGF 315
           G  DG+QP+RRS+S+D LS F            QSD N     VK+S S+ G+V+KR   
Sbjct: 271 GEKDGLQPIRRSVSLDSLSAFKISQGLAIVDQIQSDRNSRTEHVKQSESSMGIVSKRFSG 330

Query: 314 NQGLLRLIGSPLIERSSIQTGSCSIKRSVSCSANVHSS 201
           NQ L R + S  I R S+Q G  S+KRS+SC   +  S
Sbjct: 331 NQSLSRFMASSSIAR-SLQIGPSSLKRSISCGGKLFLS 367


>emb|CDO97409.1| unnamed protein product [Coffea canephora]
          Length = 412

 Score = 58.2 bits (139), Expect = 6e-07
 Identities = 44/106 (41%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
 Frame = -3

Query: 479 EEEGNSDTGGLDGIQPLRRSISMDYLS----------VFPGQSDGNLVEVK---ESSTHG 339
           E+ GNS     +GIQPLRRS+SMD LS           FP Q D N          S+ G
Sbjct: 296 EDVGNSGAREEEGIQPLRRSVSMDSLSAFKVSAAIANAFPPQCDRNSDNKNMQMNGSSMG 355

Query: 338 VVTKRVGFNQGLLRLIGSPLIERSSIQTGSCSIKRSVSCSANVHSS 201
           +  K  G  Q L R  G   +ERSS Q  + ++KRS+SCSA V  S
Sbjct: 356 LAPKGAGNEQCLSRSEGCSSVERSS-QKETSAVKRSLSCSARVFLS 400


>ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera]
          Length = 379

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 49/144 (34%), Positives = 69/144 (47%), Gaps = 38/144 (26%)
 Frame = -3

Query: 527 IEDDTVSLAENGPKINEEE--------GNSDTGGLDG-----------------IQPLRR 423
           +E+  V + ENG +  E E        G  + G L G                 IQP+RR
Sbjct: 222 LEEARVEIPENGGQFEEIEDEVCELRIGREEEGELGGVENERSSCEVAKEEVDEIQPMRR 281

Query: 422 SISMDYLS----------VFPGQSDGN---LVEVKESSTHGVVTKRVGFNQGLLRLIGSP 282
           S+SMD LS          V P +S+GN    +   + S   +V KRVG NQ L++L+ S 
Sbjct: 282 SVSMDSLSASMISLALANVHPQKSNGNSDSQLANSKKSIMPIVPKRVGGNQSLVKLMESS 341

Query: 281 LIERSSIQTGSCSIKRSVSCSANV 210
            + R  +Q+GS S+KRS SCS  +
Sbjct: 342 SMGR-ILQSGSTSMKRSFSCSGKL 364


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