BLASTX nr result
ID: Rehmannia27_contig00010838
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00010838
(1332 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011084487.1| PREDICTED: RNA polymerase sigma factor sigE,... 655 0.0
ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,... 623 0.0
ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,... 608 0.0
ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,... 606 0.0
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,... 600 0.0
ref|XP_015070568.1| PREDICTED: RNA polymerase sigma factor sigE,... 595 0.0
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,... 591 0.0
emb|CDP05091.1| unnamed protein product [Coffea canephora] 590 0.0
ref|XP_012852163.1| PREDICTED: RNA polymerase sigma factor sigE,... 584 0.0
ref|XP_008234778.1| PREDICTED: RNA polymerase sigma factor sigE,... 581 0.0
ref|XP_002513587.1| PREDICTED: RNA polymerase sigma factor sigE,... 580 0.0
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun... 579 0.0
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g... 576 0.0
ref|XP_009368680.1| PREDICTED: RNA polymerase sigma factor sigE,... 572 0.0
ref|XP_009357326.1| PREDICTED: RNA polymerase sigma factor sigE,... 572 0.0
ref|XP_015878246.1| PREDICTED: RNA polymerase sigma factor sigE,... 570 0.0
ref|XP_012440029.1| PREDICTED: RNA polymerase sigma factor sigE,... 570 0.0
gb|KHG11410.1| RNA polymerase sigma factor rpoD [Gossypium arbor... 569 0.0
gb|KJB52622.1| hypothetical protein B456_008G270500 [Gossypium r... 570 0.0
ref|XP_010097858.1| RNA polymerase sigma factor rpoD [Morus nota... 568 0.0
>ref|XP_011084487.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Sesamum indicum]
Length = 518
Score = 655 bits (1689), Expect = 0.0
Identities = 333/399 (83%), Positives = 371/399 (92%), Gaps = 1/399 (0%)
Frame = -3
Query: 1330 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASS- 1154
QRVKRR+P +K TGE AE AEKKTAD+VVR+ RKKE RL+ EKRIAL+T KE ++ ASS
Sbjct: 121 QRVKRRRPLRKRTGE-AEEAEKKTADDVVRSKRKKERRLTLEKRIALKTNKEVDFLASSS 179
Query: 1153 QQRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAIL 974
Q+RKQ+ N +DEK DRLVR YSAS+DLVS DW+KMK+PPVLPSSEHAWLFKLMQPMKAIL
Sbjct: 180 QKRKQRKNDEDEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKAIL 239
Query: 973 QVKASIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYF 794
QVK +++NDLGRE+TDDELA AT T+AVQLRKQLEVGRAAR+KLIKHNLRLVLF MNKYF
Sbjct: 240 QVKENLQNDLGREVTDDELAEATKTNAVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYF 299
Query: 793 QDFANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVS 614
QDF+NGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTY LFWIRHAI+RSMTLSSFTKVS
Sbjct: 300 QDFSNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYSLFWIRHAIIRSMTLSSFTKVS 359
Query: 613 FGLESVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAV 434
FGLESVR EIQKAKL+L FELQRLP++EE+++RVGIS ERY+EVMRVSKPI SLHARHAV
Sbjct: 360 FGLESVRVEIQKAKLELLFELQRLPSDEEIVNRVGISPERYHEVMRVSKPISSLHARHAV 419
Query: 433 TQEEFINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLG 254
TQEEFINGI+DVD VEGD+RRQP LLRLALDDVLDSL+PKESLVIRQRYGLDGKG+RTLG
Sbjct: 420 TQEEFINGISDVDDVEGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLG 479
Query: 253 EIAGNLNLSREMVRKYEVKALMKLQHPTRVDYLRRYIFK 137
EIAGNLN+SREMVRK+EVKALMKL+HP R+DYLRRYI+K
Sbjct: 480 EIAGNLNISREMVRKHEVKALMKLKHPARIDYLRRYIYK 518
>ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Erythranthe guttata]
gi|604299780|gb|EYU19623.1| hypothetical protein
MIMGU_mgv1a020453mg [Erythranthe guttata]
Length = 515
Score = 623 bits (1607), Expect = 0.0
Identities = 318/397 (80%), Positives = 355/397 (89%)
Frame = -3
Query: 1327 RVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQ 1148
RVKRRQPRK++ E A+ AEK ADNVVR+ R K+ RL+ EKRIALRTKKE E A Q+
Sbjct: 122 RVKRRQPRKRT--EYADEAEK-IADNVVRSRRSKDRRLNLEKRIALRTKKEDESTAIFQR 178
Query: 1147 RKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQV 968
RK N +DEK DRLVR YSASSDLVS DW+KMK+PPVLPS+EH WLFKLMQP+KAIL V
Sbjct: 179 RKTGKNDEDEKIDRLVRDYSASSDLVSLDWKKMKIPPVLPSAEHVWLFKLMQPVKAILDV 238
Query: 967 KASIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQD 788
K +IEN+LGRE TD++LA A N D VQLRKQLE+GRAAR+KLIKHNLRLVLF MNKYFQD
Sbjct: 239 KETIENNLGREPTDEKLATAINMDTVQLRKQLEIGRAARNKLIKHNLRLVLFVMNKYFQD 298
Query: 787 FANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFG 608
F+NG RFQDLCQAG KGLITAIDRFEPKRK RLSTYGLFWIRH+I+RSMTLSSFTKVSFG
Sbjct: 299 FSNGSRFQDLCQAGAKGLITAIDRFEPKRKLRLSTYGLFWIRHSIIRSMTLSSFTKVSFG 358
Query: 607 LESVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQ 428
LESVR EI+KAKL+L FEL+RLPT+EE++ RVGIS ERY+EVMRVSKPI+SLHARH+VTQ
Sbjct: 359 LESVRVEIRKAKLELMFELKRLPTDEEIVGRVGISQERYHEVMRVSKPIISLHARHSVTQ 418
Query: 427 EEFINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEI 248
EEFINGITDVDGVEGD R+QP LLRLALDDVLDSL+PKE+LVIRQRYGLDGKG+RTLGEI
Sbjct: 419 EEFINGITDVDGVEGDRRKQPALLRLALDDVLDSLKPKENLVIRQRYGLDGKGDRTLGEI 478
Query: 247 AGNLNLSREMVRKYEVKALMKLQHPTRVDYLRRYIFK 137
AGNLN+SREMVRKYEVKALMKL+H RVDYLRRY+FK
Sbjct: 479 AGNLNISREMVRKYEVKALMKLKHRARVDYLRRYVFK 515
>ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Nicotiana tomentosiformis]
Length = 519
Score = 608 bits (1567), Expect = 0.0
Identities = 307/397 (77%), Positives = 348/397 (87%)
Frame = -3
Query: 1330 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQ 1151
Q VKRRQ +K E E A+K ADNVV+N RKK RL+ ++RIAL KE E ASSQ
Sbjct: 123 QIVKRRQRTRKRIIEGNEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVASSQ 182
Query: 1150 QRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQ 971
+R+ K + +DEK D+LVR YS ++DL S DW+KMK+PPVLPSSEHAWLFKLMQPMKAILQ
Sbjct: 183 KRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQ 242
Query: 970 VKASIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQ 791
VK +++NDLGRE TD E+A ATN DA +LRK LEVGRAAR+KLIKHNLRLVLF +NKYFQ
Sbjct: 243 VKENLQNDLGREPTDAEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKYFQ 302
Query: 790 DFANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 611
DFANGP+FQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAI+RSMT SSFTKV F
Sbjct: 303 DFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPF 362
Query: 610 GLESVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVT 431
GLES+R EIQKAKL+L FELQR+PT+EE+I+RV +S ERY+EVM+VSKP+ SLHARH T
Sbjct: 363 GLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARHMTT 422
Query: 430 QEEFINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGE 251
QEEFINGITDVDGV+G +R+QP LLRLALDDVLDSL+PKESLVIRQRYGLDGKGNRTLGE
Sbjct: 423 QEEFINGITDVDGVDGVKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGE 482
Query: 250 IAGNLNLSREMVRKYEVKALMKLQHPTRVDYLRRYIF 140
IAGNLN+SREMVRK+EVKALMKL+HPTRVDYLRRYIF
Sbjct: 483 IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYIF 519
>ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Nicotiana sylvestris]
Length = 519
Score = 606 bits (1563), Expect = 0.0
Identities = 306/397 (77%), Positives = 346/397 (87%)
Frame = -3
Query: 1330 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQ 1151
Q VKRRQ +K E E +K ADNVV+N RKK RL+ ++RIAL KE E ASSQ
Sbjct: 123 QIVKRRQRTRKRIVEGDEETKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVASSQ 182
Query: 1150 QRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQ 971
+R+ K + +DEK D+LVR YS ++DL S DW+KMK+PPVLPSSEHAWLFKLMQPMKAILQ
Sbjct: 183 KRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQ 242
Query: 970 VKASIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQ 791
VK +++NDLGRE TD E A ATN DA +LRK LEVGRAAR+KLIKHNLRLVLF +NKYFQ
Sbjct: 243 VKENLQNDLGREPTDAEAAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKYFQ 302
Query: 790 DFANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 611
DFANGP+FQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAI+RSMT SSFTKV F
Sbjct: 303 DFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPF 362
Query: 610 GLESVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVT 431
GLES+R EIQKAKL+L FELQR+PT+EE+I+RV +S ERY+EVM+VSKP+ SLHARH T
Sbjct: 363 GLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARHMTT 422
Query: 430 QEEFINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGE 251
QEE INGITDVDGV+GD+RRQP LLRLALDDVLDSL+PKESLVIRQRYGLDGKG+RTLGE
Sbjct: 423 QEELINGITDVDGVDGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 482
Query: 250 IAGNLNLSREMVRKYEVKALMKLQHPTRVDYLRRYIF 140
IAGNLN+SREMVRK+EVKALMKL+HPTRVDYLRRYIF
Sbjct: 483 IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYIF 519
>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Solanum tuberosum]
Length = 516
Score = 600 bits (1546), Expect = 0.0
Identities = 302/395 (76%), Positives = 345/395 (87%)
Frame = -3
Query: 1324 VKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQR 1145
VKRR +K E E A+K+ ADNVV+N RK RL+ ++RIAL KE E ASS++R
Sbjct: 122 VKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSERR 181
Query: 1144 KQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQVK 965
K K + +DEK D+LVR YS ++DL S DW+KMK+PPVLPSSEH WLFKLMQPMKAILQVK
Sbjct: 182 KLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQVK 241
Query: 964 ASIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQDF 785
+++NDLGRE TD E+A ATN DA +LRK+LEVGRAAR+KLIKHNLRLVLF MNKYFQDF
Sbjct: 242 ENLQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQDF 301
Query: 784 ANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGL 605
ANG RFQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAI+RSMT SSFTKV FGL
Sbjct: 302 ANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFGL 361
Query: 604 ESVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQE 425
ES+R EIQKAKL+L FELQR+PT+EE+I RVG+S ERY+EVM+VSKP+ SLHAR+ TQE
Sbjct: 362 ESIRVEIQKAKLELLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPVSSLHARNKTTQE 421
Query: 424 EFINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEIA 245
E INGITDVDGV+GD+R+QP LLRLALDDVLDSL+PKESLVIRQRYGLDGKG+RTLGEIA
Sbjct: 422 ELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIA 481
Query: 244 GNLNLSREMVRKYEVKALMKLQHPTRVDYLRRYIF 140
GNLN+SREMVRK+EVKALMKL+HPTRVDY+RRYIF
Sbjct: 482 GNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516
>ref|XP_015070568.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial isoform X1 [Solanum
pennellii]
Length = 516
Score = 595 bits (1534), Expect = 0.0
Identities = 299/395 (75%), Positives = 342/395 (86%)
Frame = -3
Query: 1324 VKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQR 1145
VKRR +K E E A+K+ DNVV+N RKK RL+ ++RIAL KE + ASS++R
Sbjct: 122 VKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSERR 181
Query: 1144 KQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQVK 965
K K + +DEK D+LVR YS ++DL S DW+KMK+PPVLPSSEH WLFKLMQPMKAILQVK
Sbjct: 182 KLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQVK 241
Query: 964 ASIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQDF 785
+++NDLGRE TD E+A ATN DA +LRK+LE GRAAR+KLIKHNLRLVLF MNKYFQDF
Sbjct: 242 ENLQNDLGREPTDGEVAEATNIDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQDF 301
Query: 784 ANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGL 605
AN RFQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAI+RSMT SSFTKV FGL
Sbjct: 302 ANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFGL 361
Query: 604 ESVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQE 425
ES+R EIQKAKL+L FELQR+PT++E+I RVG S ERY+EVM+VSKPI SLHAR+ TQE
Sbjct: 362 ESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTTQE 421
Query: 424 EFINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEIA 245
E INGITDVDGV+GD+R+QP LLRLALDDVLDSL+PKESLVIRQRYGLDGKG+RTLGEIA
Sbjct: 422 ELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIA 481
Query: 244 GNLNLSREMVRKYEVKALMKLQHPTRVDYLRRYIF 140
GNLN+SREMVRK+EVKALMKL+HPTRVDY+RRYIF
Sbjct: 482 GNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516
>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial isoform X1 [Solanum
lycopersicum]
Length = 516
Score = 591 bits (1523), Expect = 0.0
Identities = 297/395 (75%), Positives = 340/395 (86%)
Frame = -3
Query: 1324 VKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQR 1145
VKRR +K E E A+K+ DNVV+N RKK RL+ ++RIAL KE + ASS++R
Sbjct: 122 VKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSERR 181
Query: 1144 KQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQVK 965
K + +DEK D+LVR YS ++DL S DW+KMK+PPVLPSSEH WLFKLMQPMKAILQVK
Sbjct: 182 KLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQVK 241
Query: 964 ASIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQDF 785
+++NDLGRE TD E+A ATN DA +LRK+LE GRAAR+KLIKHNLRLVLF MNKYFQDF
Sbjct: 242 ENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQDF 301
Query: 784 ANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGL 605
AN RFQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAI+R MT SSFTKV FGL
Sbjct: 302 ANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPFGL 361
Query: 604 ESVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQE 425
ES+R EIQKAKL+L FELQR+PT++E+I RVG S ERY+EVM+VSKPI SLHAR+ TQE
Sbjct: 362 ESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTTQE 421
Query: 424 EFINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEIA 245
E INGITDVDGV+GD+R+QP LLRLALDDVLDSL+PKESLVIRQRYGLDGKG+RTLGEIA
Sbjct: 422 ELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIA 481
Query: 244 GNLNLSREMVRKYEVKALMKLQHPTRVDYLRRYIF 140
GNLN+SREMVRK+EVKALMKL+HPTRVDY+RRYIF
Sbjct: 482 GNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516
>emb|CDP05091.1| unnamed protein product [Coffea canephora]
Length = 530
Score = 590 bits (1521), Expect = 0.0
Identities = 300/408 (73%), Positives = 345/408 (84%), Gaps = 13/408 (3%)
Frame = -3
Query: 1324 VKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQR 1145
+KR Q R+K E AEK T VVR+ RKK RLS +KR+ LR K++SE +SSQ+R
Sbjct: 123 MKRDQQRRKRMKEANVEAEKGTNYTVVRSPRKKSKRLSLDKRVTLRKKRDSEAISSSQKR 182
Query: 1144 KQKM-------------NGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLF 1004
K + +DEK +RL+R YS S+D S DW+KMK+PPVLPSSEH+WLF
Sbjct: 183 KSSEGDEDEEINRKSSEDDEDEKINRLLREYSGSTDFTSLDWKKMKIPPVLPSSEHSWLF 242
Query: 1003 KLMQPMKAILQVKASIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLR 824
KLMQPMKAI+QVK ++ NDLGRE TD ELA ATN D + LRK ++VG+AAR+KLIKHNLR
Sbjct: 243 KLMQPMKAIIQVKENLPNDLGREPTDGELAEATNLDVLHLRKDIKVGQAARNKLIKHNLR 302
Query: 823 LVLFAMNKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRS 644
LVLF MNKYFQDF NGP+FQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAI+RS
Sbjct: 303 LVLFVMNKYFQDFTNGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRS 362
Query: 643 MTLSSFTKVSFGLESVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKP 464
MTLSS TKVSFGL+SVR EIQ+AKL+L FELQR+PTE+E+I+RVGIS ERY+EVMRVS P
Sbjct: 363 MTLSSLTKVSFGLDSVRIEIQRAKLELLFELQRMPTEDEIIERVGISPERYHEVMRVSNP 422
Query: 463 ILSLHARHAVTQEEFINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYG 284
ILSLHARH+ TQEEFINGITDVDGVEG++RRQP LLRLALDDVLDSL+PKESLVIRQRYG
Sbjct: 423 ILSLHARHSATQEEFINGITDVDGVEGEKRRQPALLRLALDDVLDSLKPKESLVIRQRYG 482
Query: 283 LDGKGNRTLGEIAGNLNLSREMVRKYEVKALMKLQHPTRVDYLRRYIF 140
LDGKG+RTLGEIAGNLN+SREMVRK+EVKALMKL+HP RVDYLRRY++
Sbjct: 483 LDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYVY 530
>ref|XP_012852163.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Erythranthe guttata]
gi|604306141|gb|EYU25198.1| hypothetical protein
MIMGU_mgv1a004656mg [Erythranthe guttata]
Length = 516
Score = 584 bits (1506), Expect = 0.0
Identities = 297/396 (75%), Positives = 333/396 (84%)
Frame = -3
Query: 1324 VKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQR 1145
V+ RQPR+K E E N+VR+ R+ + RLS EKR+ALR KKES S ++
Sbjct: 128 VQTRQPRRKRIDESVETK------NLVRSQRRGK-RLSLEKRVALRMKKESVPLLSQKKE 180
Query: 1144 KQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQVK 965
+ DDEK DRL+R YS SSD S DW+K K+PPVLPSSEH WLFKLMQPMK IL+VK
Sbjct: 181 VNNKSDDDEKIDRLLRDYSISSDFFSLDWKKTKIPPVLPSSEHVWLFKLMQPMKEILKVK 240
Query: 964 ASIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQDF 785
++ NDLGRE+ DDELA ATNTD QLRKQLEVGR AR+KLIKHNLRLVLF MNKYFQDF
Sbjct: 241 ETLTNDLGREVRDDELAEATNTDVFQLRKQLEVGRTARNKLIKHNLRLVLFVMNKYFQDF 300
Query: 784 ANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGL 605
ANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMT+SSFTKVSFGL
Sbjct: 301 ANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTISSFTKVSFGL 360
Query: 604 ESVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQE 425
ESVR EIQKAK +L FEL RLPT+EE+I+RVGIS ER+NEV RVSKPI SLHARH +T E
Sbjct: 361 ESVRVEIQKAKTELLFELHRLPTDEEIIERVGISAERFNEVTRVSKPISSLHARHKITHE 420
Query: 424 EFINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEIA 245
EFING+ D+DG EGD+R+QP LLRLALDDVLDSL+PKESLV+RQRYGLDGKG+RTLGEIA
Sbjct: 421 EFINGVADIDGFEGDQRQQPALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIA 480
Query: 244 GNLNLSREMVRKYEVKALMKLQHPTRVDYLRRYIFK 137
GNLN+SREMVRK+EVKA MKL+HP RVDYLR +I K
Sbjct: 481 GNLNISREMVRKHEVKAFMKLKHPARVDYLRHHISK 516
>ref|XP_008234778.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Prunus mume]
Length = 507
Score = 581 bits (1498), Expect = 0.0
Identities = 287/391 (73%), Positives = 339/391 (86%)
Frame = -3
Query: 1315 RQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQRKQK 1136
R+ RKK++ +A+ E +T++ VVRN KK RLS +KR+ L+ K+ + AS ++++
Sbjct: 116 RKRRKKTSESDADKEENRTSNTVVRNRTKKAKRLSLDKRVTLKWNKDEKVIASIVRKRKS 175
Query: 1135 MNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQVKASI 956
++EK + LVR YSAS+DLVS DW+KMK+PPVL SSEHAWLFKLMQPMK +L+VK ++
Sbjct: 176 RKNENEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENL 235
Query: 955 ENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQDFANG 776
+ DLGRE T+ ELA ATN VQ++K LEVGRAARSKLIKHNLRLVLF MNKYFQDFANG
Sbjct: 236 QKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANG 295
Query: 775 PRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESV 596
P+FQDLCQAGVKGLITAIDRFEPKR FRLSTYGLFWIRHAI+RSMTLSSFT+VSFGLESV
Sbjct: 296 PKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESV 355
Query: 595 RAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQEEFI 416
RAEIQKAKL + F L+R+PTE+E+I++VGIS ERY+EVMR SKP+ SLH+RH TQEEFI
Sbjct: 356 RAEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHTTTQEEFI 415
Query: 415 NGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEIAGNL 236
NGITDVDGVEGD R++P LLRLALDDVLDSL+PKESLVIRQRYGLDGKG+RTLGEIAGNL
Sbjct: 416 NGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNL 475
Query: 235 NLSREMVRKYEVKALMKLQHPTRVDYLRRYI 143
N+SREMVRK+EVKALMKL+HP RVDYLRRY+
Sbjct: 476 NISREMVRKHEVKALMKLKHPARVDYLRRYV 506
>ref|XP_002513587.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Ricinus communis]
gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 501
Score = 580 bits (1496), Expect = 0.0
Identities = 293/394 (74%), Positives = 340/394 (86%)
Frame = -3
Query: 1324 VKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQR 1145
+++ + RK+ TGE E AE +T+ +VRN KK RLS +KRIAL+ +E E +++
Sbjct: 110 IRKGRQRKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIRKK 169
Query: 1144 KQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQVK 965
K + D+EK + LVR YSAS++LVS DWRKMK+PPVLPS+EHAWLFKLMQPMK +L VK
Sbjct: 170 KDSKD-DNEKIEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPVK 228
Query: 964 ASIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQDF 785
A ++ +LGR+ TD ELA ATN + ++RKQLEVGRAAR+KLIKHNLRLV+F MNKYFQDF
Sbjct: 229 ADLQKNLGRDPTDGELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQDF 288
Query: 784 ANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGL 605
ANGPRFQDLCQAGVKGLITAIDRFEP+R+F+LSTY LFWIRHAI+RSMTLSSFTKVSFGL
Sbjct: 289 ANGPRFQDLCQAGVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFGL 348
Query: 604 ESVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQE 425
ESVR EIQKAKL+L ELQR PTEEE+I+RVGIS ERY+EV+R +KP LSLHARHAVTQE
Sbjct: 349 ESVRTEIQKAKLELLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVTQE 408
Query: 424 EFINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEIA 245
EFINGITD+DG GD RRQP LLRLALDDVLDSL+PKESLVIRQRYGLDGKG+RTLGEIA
Sbjct: 409 EFINGITDIDG--GDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIA 466
Query: 244 GNLNLSREMVRKYEVKALMKLQHPTRVDYLRRYI 143
GNLN+SREMVRKYEVKALMKL+HP RVDYLRRY+
Sbjct: 467 GNLNISREMVRKYEVKALMKLKHPARVDYLRRYV 500
>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
gi|462415472|gb|EMJ20209.1| hypothetical protein
PRUPE_ppa004259mg [Prunus persica]
Length = 519
Score = 579 bits (1492), Expect = 0.0
Identities = 286/391 (73%), Positives = 338/391 (86%)
Frame = -3
Query: 1315 RQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQRKQK 1136
R+ RKK++ +A+ E +T++ VVRN KK RLS KR+AL+ K+ + +S ++++
Sbjct: 128 RKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISSIVRKRKS 187
Query: 1135 MNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQVKASI 956
++EK + LVR YS S+DLVS DW+KMK+PPVL SSEHAWLFKLMQPMK +L+VK ++
Sbjct: 188 RKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENL 247
Query: 955 ENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQDFANG 776
+ DLGRE T+ ELA ATN VQ++K LEVGRAARSKLIKHNLRLVLF MNKYFQDFANG
Sbjct: 248 QKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANG 307
Query: 775 PRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESV 596
P+FQDLCQAGVKGLITAIDRFEPKR FRLSTYGLFWIRHAI+RSMTLSSFT+VSFGLESV
Sbjct: 308 PKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESV 367
Query: 595 RAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQEEFI 416
RAEIQKAKL + F L+R+PTE+E+I++VGIS ERY+EVMR SKP+ SLH+RH TQEEFI
Sbjct: 368 RAEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHTTTQEEFI 427
Query: 415 NGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEIAGNL 236
NGITDVDGVEGD R++P LLRLALDDVLDSL+PKESLVIRQRYGLDGKG+RTLGEIAGNL
Sbjct: 428 NGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNL 487
Query: 235 NLSREMVRKYEVKALMKLQHPTRVDYLRRYI 143
N+SREMVRK+EVKALMKL+HP RVDYLRRY+
Sbjct: 488 NISREMVRKHEVKALMKLKHPARVDYLRRYV 518
>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
gi|590673674|ref|XP_007038960.1| Sigma factor E isoform 1
[Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
factor E isoform 1 [Theobroma cacao]
gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
[Theobroma cacao]
Length = 516
Score = 576 bits (1485), Expect = 0.0
Identities = 290/395 (73%), Positives = 333/395 (84%)
Frame = -3
Query: 1327 RVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQ 1148
++K R+ R+K + E E VVRN + RLS + RIAL+ +E E P S +
Sbjct: 122 KIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNRE-EKPVVSVR 180
Query: 1147 RKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQV 968
RK+ + EK DRLVR YSAS+DLVS DWRKMK+PPVLPS EH WLFKLMQPMKA+LQ
Sbjct: 181 RKKSSENESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQA 240
Query: 967 KASIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQD 788
K +++ DLGR+ T+DELA ATN A Q+RK LEVG+AAR+KLIKHNLRLVLF++NKYFQD
Sbjct: 241 KENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQD 300
Query: 787 FANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFG 608
FANGPRFQDLCQAGVKGLITAIDRFEP+R+FRLSTY LFWIRHAI+RSMTLSSFT+VSFG
Sbjct: 301 FANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSFG 360
Query: 607 LESVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQ 428
LESVR EIQ+AKL+L FEL R PTEEE+I +VGIS ERY EVMR SKP+ SLH+RH+VTQ
Sbjct: 361 LESVRVEIQRAKLELLFELHREPTEEEIIKKVGISPERYQEVMRASKPVASLHSRHSVTQ 420
Query: 427 EEFINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEI 248
EEFINGITD+DGV GD RRQP LLRLALDDVLDSL+PKESLVIRQRYGLDGKG+RTLGEI
Sbjct: 421 EEFINGITDIDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 480
Query: 247 AGNLNLSREMVRKYEVKALMKLQHPTRVDYLRRYI 143
AGNLN+SREMVRK+EVKALMKL+HP RVDYLRRY+
Sbjct: 481 AGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 515
>ref|XP_009368680.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Pyrus x bretschneideri]
Length = 519
Score = 572 bits (1474), Expect = 0.0
Identities = 284/391 (72%), Positives = 339/391 (86%)
Frame = -3
Query: 1315 RQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQRKQK 1136
R+ RKK++ + E EK+T+D VVR+ KK RL+ +KR+AL+ K+ + +S Q+RK +
Sbjct: 129 RKRRKKTSESDHEKEEKRTSDIVVRSKTKKAKRLNLDKRVALKWNKDEKVVSSVQKRKDQ 188
Query: 1135 MNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQVKASI 956
N + EK + LVR YSAS+DLVS DW+KMK+PPVL SSEHAWLFKLMQPMK + +V+ +
Sbjct: 189 KN-ETEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLHEVREQL 247
Query: 955 ENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQDFANG 776
+ DLG E T+ ELA ATN VQ++K EVGRAAR+KLIKHNLRLVLF +NKYFQDFANG
Sbjct: 248 QKDLGTEPTNGELAEATNMSVVQVKKHFEVGRAARNKLIKHNLRLVLFVINKYFQDFANG 307
Query: 775 PRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESV 596
P+FQDLCQAGV+GLITAIDRFEPKR FRLSTYGLFWIRHAI+RSMT+SSFT+VSFGLESV
Sbjct: 308 PKFQDLCQAGVRGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTVSSFTRVSFGLESV 367
Query: 595 RAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQEEFI 416
RAEIQKAKL++ F L+R+PT+EE+I++VGIS ERY+EVMR SKP+ SLH+RHA TQEE+I
Sbjct: 368 RAEIQKAKLEMMFSLKRMPTDEEIIEKVGISPERYHEVMRASKPVSSLHSRHATTQEEYI 427
Query: 415 NGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEIAGNL 236
NGITDVDGVEGD RR+P LLRLA+DDVLDSL+PKESLVIRQRYGLDGKG+RTLGEIAGNL
Sbjct: 428 NGITDVDGVEGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNL 487
Query: 235 NLSREMVRKYEVKALMKLQHPTRVDYLRRYI 143
N+SREMVRK+EVKALMKL+HP RVDYLRRYI
Sbjct: 488 NISREMVRKHEVKALMKLKHPARVDYLRRYI 518
>ref|XP_009357326.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Pyrus x bretschneideri]
Length = 519
Score = 572 bits (1473), Expect = 0.0
Identities = 284/391 (72%), Positives = 339/391 (86%)
Frame = -3
Query: 1315 RQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQRKQK 1136
R+ RKK++ + E EK+T+D VVR+ KK RL+ +KR+AL+ K+ + +S Q+RK +
Sbjct: 129 RKRRKKTSESDHEKEEKRTSDIVVRSKTKKAKRLNLDKRVALKWNKDEKVVSSVQKRKDQ 188
Query: 1135 MNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQVKASI 956
N + EK + LVR YSAS+DLVS DW+KMK+PPVL SSEHAWLFKLMQPMK + +V+ +
Sbjct: 189 KN-ETEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLHEVREQL 247
Query: 955 ENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQDFANG 776
+ DLG E T+ ELA ATN VQ++K EVGRAAR+KLIKHNLRLVLF +NKYFQDFANG
Sbjct: 248 QKDLGTEPTNGELAEATNMSVVQVKKHFEVGRAARNKLIKHNLRLVLFVINKYFQDFANG 307
Query: 775 PRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESV 596
P+FQDLCQAGV+GLITAIDRFEPKR FRLSTYGLFWIRHAI+RSMT+SSFT+VSFGLESV
Sbjct: 308 PKFQDLCQAGVRGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTVSSFTRVSFGLESV 367
Query: 595 RAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQEEFI 416
RAEIQKAKL++ F L+R+PT+EE+I++VGIS ERY+EVMR SKP+ SLH+RHA TQEE+I
Sbjct: 368 RAEIQKAKLEMIFSLKRMPTDEEIIEKVGISPERYHEVMRASKPVSSLHSRHATTQEEYI 427
Query: 415 NGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEIAGNL 236
NGITDVDGVEGD RR+P LLRLA+DDVLDSL+PKESLVIRQRYGLDGKG+RTLGEIAGNL
Sbjct: 428 NGITDVDGVEGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNL 487
Query: 235 NLSREMVRKYEVKALMKLQHPTRVDYLRRYI 143
N+SREMVRK+EVKALMKL+HP RVDYLRRYI
Sbjct: 488 NISREMVRKHEVKALMKLKHPARVDYLRRYI 518
>ref|XP_015878246.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Ziziphus jujuba]
Length = 515
Score = 570 bits (1469), Expect = 0.0
Identities = 286/395 (72%), Positives = 342/395 (86%)
Frame = -3
Query: 1327 RVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQ 1148
+ + R+ +KK + ++ E EK+T+ + VR+ RKK RL+ +KR+ L+ K E A ++
Sbjct: 123 KTRGRRRKKKISADDEE--EKRTSGSFVRSRRKKAKRLNLDKRVELKKNKVDEVNACVRK 180
Query: 1147 RKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQV 968
RK+ ++ +D + LVR YSAS+DLVS DW+KMK+PPVLPS+EHAWLFKLMQP+KA+LQV
Sbjct: 181 RKESISENDN-IENLVREYSASTDLVSLDWKKMKIPPVLPSTEHAWLFKLMQPLKALLQV 239
Query: 967 KASIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQD 788
+++ LGR+ T+ ELA ATN Q+++ LEVGRAAR+KLIKHNLRLVLF +NKYFQD
Sbjct: 240 NENLKQSLGRKPTEGELAEATNMSIAQVKRHLEVGRAARNKLIKHNLRLVLFVINKYFQD 299
Query: 787 FANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFG 608
FANGPRFQDLCQAGVKGLITAIDRFEPKR+FRLSTYGLFWIRHAI+RSMTLSSF +VSFG
Sbjct: 300 FANGPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFQRVSFG 359
Query: 607 LESVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQ 428
LESVRAEIQKAKL+L FEL+RLPTEEE+I++VGIS ERYNEVMR SK + SLH+RHAVTQ
Sbjct: 360 LESVRAEIQKAKLELMFELKRLPTEEEIIEKVGISPERYNEVMRASKAVFSLHSRHAVTQ 419
Query: 427 EEFINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEI 248
EEFI+GITDV+GVEGD RRQP LLRLALDDVLDSL+PKESLVIRQRYGLDG+G+RTLGEI
Sbjct: 420 EEFIDGITDVEGVEGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGRGDRTLGEI 479
Query: 247 AGNLNLSREMVRKYEVKALMKLQHPTRVDYLRRYI 143
AGNLN+SREMVRK+EVKALMKL+HP RVDYLRRYI
Sbjct: 480 AGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 514
>ref|XP_012440029.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Gossypium raimondii]
gi|823214552|ref|XP_012440030.1| PREDICTED: RNA
polymerase sigma factor sigE, chloroplastic/mitochondrial
[Gossypium raimondii] gi|763785552|gb|KJB52623.1|
hypothetical protein B456_008G270500 [Gossypium
raimondii] gi|763785553|gb|KJB52624.1| hypothetical
protein B456_008G270500 [Gossypium raimondii]
Length = 516
Score = 570 bits (1468), Expect = 0.0
Identities = 289/393 (73%), Positives = 332/393 (84%)
Frame = -3
Query: 1321 KRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQRK 1142
K RQ R+K + E A+ VVR+ KK RL +KRI L+ +E + S Q +K
Sbjct: 124 KGRQLRRKRSKESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREEKSVVSGQSKK 183
Query: 1141 QKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQVKA 962
N + EK DRLVR YSAS+DLVS DW+KMKMPPVLPS+EH WLFKLMQPMKA+L+ K
Sbjct: 184 GISN-ESEKIDRLVRDYSASTDLVSLDWKKMKMPPVLPSTEHTWLFKLMQPMKALLEAKE 242
Query: 961 SIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQDFA 782
+++ DLGR+ T+DELA ATN+ A Q+R+QLEVGRAAR+KLIKHNLRLVLF + KYFQDFA
Sbjct: 243 NLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFVIKKYFQDFA 302
Query: 781 NGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLE 602
NGPRFQDLCQAGVKGLITAIDRFEP+R+FRLSTYGLFWIRHAI+RSMTLSSFT+VSFGLE
Sbjct: 303 NGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLE 362
Query: 601 SVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQEE 422
SVR EIQ+AKL+L FEL R PT++EVI RVGIS ERY EVMR SKP+ SLH RH+VTQEE
Sbjct: 363 SVRVEIQRAKLELLFELHREPTDDEVIKRVGISPERYQEVMRASKPVASLHLRHSVTQEE 422
Query: 421 FINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEIAG 242
FI+GITDVDGV GD RRQP LLRLALDDVLDSL+PKESLVIRQRYGLDGKG+RTLGEIAG
Sbjct: 423 FISGITDVDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAG 482
Query: 241 NLNLSREMVRKYEVKALMKLQHPTRVDYLRRYI 143
NL++SREMVRK+EVKALMKL+HP RVDYLRRY+
Sbjct: 483 NLSISREMVRKHEVKALMKLKHPARVDYLRRYV 515
>gb|KHG11410.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
Length = 516
Score = 569 bits (1467), Expect = 0.0
Identities = 288/393 (73%), Positives = 332/393 (84%)
Frame = -3
Query: 1321 KRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQRK 1142
K R R+K + E A+ VVR+ KK RL +KRI L+ +E + S Q +K
Sbjct: 124 KGRHLRRKRSTESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREEKSVVSGQSKK 183
Query: 1141 QKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQVKA 962
N + EK DRLVR YSAS+DLVS DW+KMK+PPVLPS+EH WLFKLMQPMKA+L+ K
Sbjct: 184 GISN-ESEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSTEHTWLFKLMQPMKALLEAKE 242
Query: 961 SIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQDFA 782
+++ DLGR+ T+DELA ATN+ A Q+R+QLEVGRAAR+KLIKHNLRLVLF +NKYFQDFA
Sbjct: 243 NLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFQDFA 302
Query: 781 NGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLE 602
NGPRFQDLCQAGVKGLITAIDRFEP+R+FRLSTYGLFWIRHAI+RSMTLSSFT+VSFGLE
Sbjct: 303 NGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLE 362
Query: 601 SVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQEE 422
SVR EIQ+AKL+L FEL R PT++EVI RVGIS ERY EVMR SKP+ SLH RH+VTQEE
Sbjct: 363 SVRVEIQRAKLELLFELHREPTDDEVIKRVGISPERYQEVMRASKPVASLHLRHSVTQEE 422
Query: 421 FINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEIAG 242
FI+GITDVDGV GD RRQP LLRLALDDVLDSL+PKESLVIRQRYGLDGKG+RTLGEI+G
Sbjct: 423 FISGITDVDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEISG 482
Query: 241 NLNLSREMVRKYEVKALMKLQHPTRVDYLRRYI 143
NLN+SREMVRK+EVKALMKL+HP RVDYLRRY+
Sbjct: 483 NLNISREMVRKHEVKALMKLKHPARVDYLRRYV 515
>gb|KJB52622.1| hypothetical protein B456_008G270500 [Gossypium raimondii]
Length = 547
Score = 570 bits (1468), Expect = 0.0
Identities = 289/393 (73%), Positives = 332/393 (84%)
Frame = -3
Query: 1321 KRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQRK 1142
K RQ R+K + E A+ VVR+ KK RL +KRI L+ +E + S Q +K
Sbjct: 155 KGRQLRRKRSKESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREEKSVVSGQSKK 214
Query: 1141 QKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQVKA 962
N + EK DRLVR YSAS+DLVS DW+KMKMPPVLPS+EH WLFKLMQPMKA+L+ K
Sbjct: 215 GISN-ESEKIDRLVRDYSASTDLVSLDWKKMKMPPVLPSTEHTWLFKLMQPMKALLEAKE 273
Query: 961 SIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQDFA 782
+++ DLGR+ T+DELA ATN+ A Q+R+QLEVGRAAR+KLIKHNLRLVLF + KYFQDFA
Sbjct: 274 NLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFVIKKYFQDFA 333
Query: 781 NGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLE 602
NGPRFQDLCQAGVKGLITAIDRFEP+R+FRLSTYGLFWIRHAI+RSMTLSSFT+VSFGLE
Sbjct: 334 NGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLE 393
Query: 601 SVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQEE 422
SVR EIQ+AKL+L FEL R PT++EVI RVGIS ERY EVMR SKP+ SLH RH+VTQEE
Sbjct: 394 SVRVEIQRAKLELLFELHREPTDDEVIKRVGISPERYQEVMRASKPVASLHLRHSVTQEE 453
Query: 421 FINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEIAG 242
FI+GITDVDGV GD RRQP LLRLALDDVLDSL+PKESLVIRQRYGLDGKG+RTLGEIAG
Sbjct: 454 FISGITDVDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAG 513
Query: 241 NLNLSREMVRKYEVKALMKLQHPTRVDYLRRYI 143
NL++SREMVRK+EVKALMKL+HP RVDYLRRY+
Sbjct: 514 NLSISREMVRKHEVKALMKLKHPARVDYLRRYV 546
>ref|XP_010097858.1| RNA polymerase sigma factor rpoD [Morus notabilis]
gi|587883538|gb|EXB72455.1| RNA polymerase sigma factor
rpoD [Morus notabilis]
Length = 517
Score = 568 bits (1464), Expect = 0.0
Identities = 282/393 (71%), Positives = 336/393 (85%), Gaps = 2/393 (0%)
Frame = -3
Query: 1315 RQPRKKSTGEEAEVAEKK--TADNVVRNMRKKEIRLSFEKRIALRTKKESEYPASSQQRK 1142
R+ R K GE E A KK T+D VVRN +KK RLS KR+ L+ KE +++
Sbjct: 124 RRRRSKVIGESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENVAVVLVRKR 183
Query: 1141 QKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQVKA 962
++ ++EK ++LVR YSAS+DLVS DW+KMK+PPVLPSSEH WLFKLMQP+K + QV
Sbjct: 184 RESLNEEEKIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLKQLFQVGE 243
Query: 961 SIENDLGRELTDDELAGATNTDAVQLRKQLEVGRAARSKLIKHNLRLVLFAMNKYFQDFA 782
++ LGRE T++ELA ATN VQ+++ LE GRAAR+KLIKHNLRLVLF MNKYFQDF
Sbjct: 244 DLQKTLGREPTENELAEATNISVVQVKRHLEAGRAARNKLIKHNLRLVLFVMNKYFQDFT 303
Query: 781 NGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLE 602
NGP+FQDLCQAGV+GLITAIDRFEPKR+FRLSTYGLFWIRHAI+RSMT+SSFT+VSFGLE
Sbjct: 304 NGPKFQDLCQAGVRGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVSFGLE 363
Query: 601 SVRAEIQKAKLKLSFELQRLPTEEEVIDRVGISTERYNEVMRVSKPILSLHARHAVTQEE 422
SVRAEIQKAK++L+FEL+RLPTEEE+I++VGIS ERY+EVMR SKP++SL++RH TQEE
Sbjct: 364 SVRAEIQKAKIELTFELKRLPTEEEIIEKVGISPERYHEVMRASKPVISLNSRHVTTQEE 423
Query: 421 FINGITDVDGVEGDERRQPTLLRLALDDVLDSLRPKESLVIRQRYGLDGKGNRTLGEIAG 242
FIN ITDVDGV+GD+RR+P LLRLALDDVLDSL+PKESLVIRQRYGLDGKG+RTLGEIAG
Sbjct: 424 FINAITDVDGVDGDDRRKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAG 483
Query: 241 NLNLSREMVRKYEVKALMKLQHPTRVDYLRRYI 143
NLN+SREMVRK+EVKALMKL+HP RVDYLRRY+
Sbjct: 484 NLNISREMVRKHEVKALMKLKHPARVDYLRRYM 516