BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00010431
         (1206 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011092547.1| PREDICTED: DNA-directed RNA polymerases II, ...   279   e-136
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, ...   254   e-124
ref|XP_007042502.1| DNA-directed RNA polymerase family protein [...   252   e-124
ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, ...   251   e-124
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   253   e-124
ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ...   256   e-124
ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerases II, ...   255   e-123
ref|XP_015076219.1| PREDICTED: DNA-directed RNA polymerases II, ...   255   e-123
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr...   246   e-122
ref|XP_002518700.1| PREDICTED: DNA-directed RNA polymerases II, ...   253   e-122
ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, ...   248   e-121
gb|KHG20623.1| DNA-directed RNA polymerase II subunit RPB3-A -li...   245   e-121
gb|KMT01164.1| hypothetical protein BVRB_9g224160 [Beta vulgaris...   254   e-121
ref|XP_010691712.1| PREDICTED: DNA-directed RNA polymerases II, ...   253   e-121
ref|XP_009785778.1| PREDICTED: DNA-directed RNA polymerases II, ...   256   e-121
ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polype...   253   e-120
ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerases II, ...   253   e-120
ref|XP_009605052.1| PREDICTED: DNA-directed RNA polymerases II, ...   256   e-120
ref|XP_015892771.1| PREDICTED: DNA-directed RNA polymerases II, ...   255   e-120
ref|XP_011000984.1| PREDICTED: DNA-directed RNA polymerases II, ...   250   e-120

>ref|XP_011092547.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Sesamum indicum]
          Length = 319

 Score =  279 bits (713), Expect(2) = e-136
 Identities = 138/149 (92%), Positives = 142/149 (95%)
 Frame = -3

Query: 877 QGFWIVRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSV 698
           +G    RFPKIKIRTVRDDFMKFELR+TDASIANALRRVMIAEVPTIAIDLVEIEVNSSV
Sbjct: 2   EGVSYQRFPKIKIRTVRDDFMKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSSV 61

Query: 697 LNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVT 518
           LNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVT
Sbjct: 62  LNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVT 121

Query: 517 SKDLYSSDHTVVPVDFPDSSTGLDNADNR 431
           SKDLYSSDHTVVPVDF DSSTG DN +NR
Sbjct: 122 SKDLYSSDHTVVPVDFSDSSTGFDNTENR 150



 Score =  234 bits (598), Expect(2) = e-136
 Identities = 121/143 (84%), Positives = 126/143 (88%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEPEIYIN             EFV+SSPTKVF
Sbjct: 162 ELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMEGLTLEEKKEFVDSSPTKVF 221

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
           DIN NT QVY++DAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTG IKASQL
Sbjct: 222 DINPNTHQVYVHDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKASQL 281

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
           FLNAI+VLKQKLDAVRLS+DTVE
Sbjct: 282 FLNAIDVLKQKLDAVRLSSDTVE 304


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Vitis vinifera] gi|731383801|ref|XP_010647901.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 3 [Vitis vinifera]
          Length = 318

 Score =  254 bits (649), Expect(2) = e-124
 Identities = 127/149 (85%), Positives = 137/149 (91%)
 Frame = -3

Query: 877 QGFWIVRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSV 698
           +G    RFPKIKIR V+DD+ KFELRETDAS+ANALRRVMIAEVPT+AIDLVEIEVNSSV
Sbjct: 2   EGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSV 61

Query: 697 LNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVT 518
           LNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLDVT
Sbjct: 62  LNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDVT 121

Query: 517 SKDLYSSDHTVVPVDFPDSSTGLDNADNR 431
           SKDL SSDHTVVPVDF DSS G D+AD +
Sbjct: 122 SKDLISSDHTVVPVDFSDSS-GYDSADKK 149



 Score =  220 bits (561), Expect(2) = e-124
 Identities = 115/143 (80%), Positives = 124/143 (86%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+IN              +VESSPTKVF
Sbjct: 161 ELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVF 220

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
           DI+A++QQV + DAEAYTYDDEVLKKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL
Sbjct: 221 DIDASSQQVVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQL 280

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAI+VLKQKLDAVRLS DTVE
Sbjct: 281 VLNAIDVLKQKLDAVRLSEDTVE 303


>ref|XP_007042502.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
           gi|508706437|gb|EOX98333.1| DNA-directed RNA polymerase
           family protein [Theobroma cacao]
          Length = 318

 Score =  252 bits (644), Expect(2) = e-124
 Identities = 124/149 (83%), Positives = 138/149 (92%)
 Frame = -3

Query: 877 QGFWIVRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSV 698
           +G    RFPK+KIR ++DD+ KFELR+TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSSV
Sbjct: 2   EGVSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSV 61

Query: 697 LNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVT 518
           LNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+ DQTLDVT
Sbjct: 62  LNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDVT 121

Query: 517 SKDLYSSDHTVVPVDFPDSSTGLDNADNR 431
           SKDLYSSDHTVVPVDF DS+ G D+++ R
Sbjct: 122 SKDLYSSDHTVVPVDFTDSA-GYDSSEQR 149



 Score =  222 bits (566), Expect(2) = e-124
 Identities = 116/143 (81%), Positives = 122/143 (85%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+IN              FVESSPT+VF
Sbjct: 161 ELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDMMETLTLEEKQSFVESSPTRVF 220

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
           DI+ NTQQV + D EAYTYDDEVLKKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL
Sbjct: 221 DIDPNTQQVVVVDPEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQL 280

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIEVLKQKLDAVRLS DTVE
Sbjct: 281 VLNAIEVLKQKLDAVRLSEDTVE 303


>ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Gossypium raimondii] gi|728821384|gb|KHG04309.1|
           DNA-directed RNA polymerase II subunit RPB3-A -like
           protein [Gossypium arboreum] gi|763780305|gb|KJB47376.1|
           hypothetical protein B456_008G023500 [Gossypium
           raimondii]
          Length = 318

 Score =  251 bits (640), Expect(2) = e-124
 Identities = 123/149 (82%), Positives = 138/149 (92%)
 Frame = -3

Query: 877 QGFWIVRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSV 698
           +G    RFPK+KIR ++DD+ KFELR+TDAS+ANALRRVMI+EVPTIAIDLVEIEVNSSV
Sbjct: 2   EGISYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMISEVPTIAIDLVEIEVNSSV 61

Query: 697 LNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVT 518
           LNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKCI+DQTLDVT
Sbjct: 62  LNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDVT 121

Query: 517 SKDLYSSDHTVVPVDFPDSSTGLDNADNR 431
           SKDLYSSDHTVVPVDF D++ G D+ + R
Sbjct: 122 SKDLYSSDHTVVPVDFTDNA-GYDSTEPR 149



 Score =  223 bits (568), Expect(2) = e-124
 Identities = 116/143 (81%), Positives = 122/143 (85%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+IN              FVESSPTKVF
Sbjct: 161 ELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLTLEEKLSFVESSPTKVF 220

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
           DI+ NTQQV + D EAYTYDDEVLKKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL
Sbjct: 221 DIDPNTQQVVVVDPEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQL 280

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIE+LKQKLDAVRLS DTVE
Sbjct: 281 VLNAIEILKQKLDAVRLSEDTVE 303


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  253 bits (646), Expect(2) = e-124
 Identities = 126/149 (84%), Positives = 137/149 (91%)
 Frame = -3

Query: 877 QGFWIVRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSV 698
           +G    RFPKIKIR V+DD+ KFELRETDAS+ANALRRVMIAEVPT+AIDLVEIEVNSSV
Sbjct: 2   EGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSV 61

Query: 697 LNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVT 518
           LNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLDVT
Sbjct: 62  LNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDVT 121

Query: 517 SKDLYSSDHTVVPVDFPDSSTGLDNADNR 431
           SKDL SSDHTVVPVDF DSS G D+AD +
Sbjct: 122 SKDLISSDHTVVPVDFSDSS-GYDSADKK 149



 Score =  220 bits (561), Expect(2) = e-124
 Identities = 115/143 (80%), Positives = 124/143 (86%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+IN              +VESSPTKVF
Sbjct: 161 ELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVF 220

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
           DI+A++QQV + DAEAYTYDDEVLKKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL
Sbjct: 221 DIDASSQQVVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQL 280

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAI+VLKQKLDAVRLS DTVE
Sbjct: 281 VLNAIDVLKQKLDAVRLSEDTVE 303


>ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Solanum tuberosum]
          Length = 319

 Score =  256 bits (655), Expect(2) = e-124
 Identities = 124/149 (83%), Positives = 137/149 (91%)
 Frame = -3

Query: 877 QGFWIVRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSV 698
           +G    RFPKIKIR V+DDFMKFELRETDASIANALRR+MIAEVPTIAIDLVEIEVNSSV
Sbjct: 2   EGVSYQRFPKIKIREVKDDFMKFELRETDASIANALRRIMIAEVPTIAIDLVEIEVNSSV 61

Query: 697 LNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVT 518
           LNDEFI+HRLGL+PLTSERAM+MRFSRDCDACDGDGQCEYCSVEF+LR KC++DQTLDVT
Sbjct: 62  LNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDVT 121

Query: 517 SKDLYSSDHTVVPVDFPDSSTGLDNADNR 431
           SKDL SSDHTVVPVD+ D+S+  DN  N+
Sbjct: 122 SKDLLSSDHTVVPVDYSDTSSSFDNTPNK 150



 Score =  216 bits (551), Expect(2) = e-124
 Identities = 114/143 (79%), Positives = 119/143 (83%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEPEIYIN             E VESSPTKVF
Sbjct: 162 ELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVF 221

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
            I+   +QV + D EAYTYDDEVLKKAEAMGKPG+VEIHAKEDSFIFTVETTGA+KASQL
Sbjct: 222 GIDPENKQVIVVDPEAYTYDDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQL 281

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIEVLKQKLDAVRLS DTVE
Sbjct: 282 VLNAIEVLKQKLDAVRLSDDTVE 304


>ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Solanum lycopersicum]
          Length = 319

 Score =  255 bits (651), Expect(2) = e-123
 Identities = 122/149 (81%), Positives = 137/149 (91%)
 Frame = -3

Query: 877 QGFWIVRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSV 698
           +G    RFPKIK+R V+DDFMKFELR+TDASIANALRR+MIAEVPTIAIDLVEIEVNSSV
Sbjct: 2   EGVSYQRFPKIKVREVKDDFMKFELRDTDASIANALRRIMIAEVPTIAIDLVEIEVNSSV 61

Query: 697 LNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVT 518
           LNDEFI+HRLGL+PLTSERAM+MRFSRDCDACDGDGQCEYCSVEF+LR KC++DQTLDVT
Sbjct: 62  LNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDVT 121

Query: 517 SKDLYSSDHTVVPVDFPDSSTGLDNADNR 431
           SKDL SSDHTVVPVD+ D+S+  DN  N+
Sbjct: 122 SKDLLSSDHTVVPVDYSDASSSFDNTPNK 150



 Score =  216 bits (551), Expect(2) = e-123
 Identities = 114/143 (79%), Positives = 119/143 (83%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEPEIYIN             E VESSPTKVF
Sbjct: 162 ELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVF 221

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
            I+   +QV + D EAYTYDDEVLKKAEAMGKPG+VEIHAKEDSFIFTVETTGA+KASQL
Sbjct: 222 GIDPENKQVIVVDPEAYTYDDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQL 281

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIEVLKQKLDAVRLS DTVE
Sbjct: 282 VLNAIEVLKQKLDAVRLSDDTVE 304


>ref|XP_015076219.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Solanum pennellii]
          Length = 319

 Score =  255 bits (651), Expect(2) = e-123
 Identities = 122/143 (85%), Positives = 135/143 (94%)
 Frame = -3

Query: 859 RFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI 680
           RFPKIKIR V+DDFMKFELR+TDASIANALRR+MIAEVPTIAIDLVEIEVNSSVLNDEFI
Sbjct: 8   RFPKIKIREVKDDFMKFELRDTDASIANALRRIMIAEVPTIAIDLVEIEVNSSVLNDEFI 67

Query: 679 AHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDLYS 500
           +HRLGL+PLTSERAM+MRFSRDCDACDGDGQCEYCSVEF+LR KC++DQTLDVTSKDL S
Sbjct: 68  SHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDVTSKDLLS 127

Query: 499 SDHTVVPVDFPDSSTGLDNADNR 431
           SDHTVVPVD+ D+S+  DN  N+
Sbjct: 128 SDHTVVPVDYSDASSSFDNTPNK 150



 Score =  215 bits (548), Expect(2) = e-123
 Identities = 113/143 (79%), Positives = 119/143 (83%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEPEIYIN             E VESSPTKVF
Sbjct: 162 ELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEDMMESLSLEEKTELVESSPTKVF 221

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
            I+   +QV + D EAYTYDDEVLKKAEAMGKPG+VEIHA+EDSFIFTVETTGA+KASQL
Sbjct: 222 GIDPENKQVIVVDPEAYTYDDEVLKKAEAMGKPGVVEIHAREDSFIFTVETTGAVKASQL 281

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIEVLKQKLDAVRLS DTVE
Sbjct: 282 VLNAIEVLKQKLDAVRLSDDTVE 304


>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
           gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 3 [Citrus sinensis]
           gi|557524889|gb|ESR36195.1| hypothetical protein
           CICLE_v10028849mg [Citrus clementina]
           gi|641840877|gb|KDO59794.1| hypothetical protein
           CISIN_1g020936mg [Citrus sinensis]
           gi|641840878|gb|KDO59795.1| hypothetical protein
           CISIN_1g020936mg [Citrus sinensis]
          Length = 319

 Score =  246 bits (629), Expect(2) = e-122
 Identities = 121/143 (84%), Positives = 134/143 (93%)
 Frame = -3

Query: 859 RFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI 680
           RFPK+KIR ++DD+ KFELR+TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI
Sbjct: 8   RFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI 67

Query: 679 AHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDLYS 500
           AHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC +DQTLDVTSKDLYS
Sbjct: 68  AHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYS 127

Query: 499 SDHTVVPVDFPDSSTGLDNADNR 431
           SDH+VVPVDF D + G D+ D +
Sbjct: 128 SDHSVVPVDFVDPA-GYDSTDQQ 149



 Score =  223 bits (568), Expect(2) = e-122
 Identities = 116/143 (81%), Positives = 123/143 (86%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+IN              +VESSPTKVF
Sbjct: 162 ELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVF 221

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
           DI+ NT QVY+ DAEAYTYDDEV+KKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL
Sbjct: 222 DIDPNTGQVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQL 281

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIEVLKQKLDAVRLS DTVE
Sbjct: 282 VLNAIEVLKQKLDAVRLSEDTVE 304


>ref|XP_002518700.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Ricinus communis] gi|223542081|gb|EEF43625.1|
           DNA-directed RNA polymerase II subunit, putative
           [Ricinus communis]
          Length = 318

 Score =  253 bits (647), Expect(2) = e-122
 Identities = 124/143 (86%), Positives = 136/143 (95%)
 Frame = -3

Query: 859 RFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI 680
           RFP+IKIR ++DD+ KFELR+TDAS+ANALRRVMIAEVPT+AIDLVEIEVNSSVLNDEFI
Sbjct: 8   RFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLNDEFI 67

Query: 679 AHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDLYS 500
           AHRLGLIPLTSERAM+MRFSRDCDACDGDGQC+YCSVEFHLRAKCI DQTLDVTSKDLYS
Sbjct: 68  AHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDVTSKDLYS 127

Query: 499 SDHTVVPVDFPDSSTGLDNADNR 431
           SDHTVVPVDF DSS G D+++ R
Sbjct: 128 SDHTVVPVDFSDSS-GYDSSEQR 149



 Score =  214 bits (544), Expect(2) = e-122
 Identities = 110/143 (76%), Positives = 120/143 (83%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEP+I+IN              +VESSPTKVF
Sbjct: 161 ELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVF 220

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
           DI+ NTQQV + D EAYTYD+EV+KKAE+MGKPGLV I AKEDSFIFTVE+TGAIKASQL
Sbjct: 221 DIDPNTQQVVVVDPEAYTYDEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQL 280

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIE+LKQKLDAVRLS DTVE
Sbjct: 281 VLNAIEILKQKLDAVRLSEDTVE 303


>ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Gossypium raimondii] gi|763810754|gb|KJB77656.1|
           hypothetical protein B456_012G149200 [Gossypium
           raimondii]
          Length = 318

 Score =  248 bits (632), Expect(2) = e-121
 Identities = 120/143 (83%), Positives = 136/143 (95%)
 Frame = -3

Query: 859 RFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI 680
           RFP++KIR ++DD+ KFEL +TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI
Sbjct: 8   RFPRVKIRELKDDYAKFELHDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI 67

Query: 679 AHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDLYS 500
           AHRLGLIPLTS+RAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKCI+DQTLDVTSKDLYS
Sbjct: 68  AHRLGLIPLTSQRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDVTSKDLYS 127

Query: 499 SDHTVVPVDFPDSSTGLDNADNR 431
           SDHTVVPVDF DS+ G ++++ R
Sbjct: 128 SDHTVVPVDFTDSA-GYESSEQR 149



 Score =  218 bits (554), Expect(2) = e-121
 Identities = 111/143 (77%), Positives = 121/143 (84%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+IN              FV+SSPT+VF
Sbjct: 161 ELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVF 220

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
           DI+ NTQQV + D EAYTYDDEVLKKAEAMGKPGLVEI+AKEDSFIFT+E+TGA+KA QL
Sbjct: 221 DIDPNTQQVVVVDPEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKAFQL 280

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIE+LKQKLDAVRLS DTVE
Sbjct: 281 VLNAIEILKQKLDAVRLSEDTVE 303


>gb|KHG20623.1| DNA-directed RNA polymerase II subunit RPB3-A -like protein
           [Gossypium arboreum]
          Length = 318

 Score =  245 bits (626), Expect(2) = e-121
 Identities = 119/143 (83%), Positives = 135/143 (94%)
 Frame = -3

Query: 859 RFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI 680
           RFP++KIR ++DD+ KFEL +TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI
Sbjct: 8   RFPRVKIRELKDDYAKFELHDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI 67

Query: 679 AHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDLYS 500
           AHRLGLIPLTS+RAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKCI+DQTLDVTSKDLYS
Sbjct: 68  AHRLGLIPLTSQRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDVTSKDLYS 127

Query: 499 SDHTVVPVDFPDSSTGLDNADNR 431
           SDHTVVPVDF D + G ++++ R
Sbjct: 128 SDHTVVPVDFTDYA-GYESSEQR 149



 Score =  220 bits (560), Expect(2) = e-121
 Identities = 112/143 (78%), Positives = 122/143 (85%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+IN              FV+SSPT+VF
Sbjct: 161 ELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVF 220

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
           DI+ NTQQV + D EAYTYDDEVLKKAEAMGKPGLVEI+AKEDSFIFT+E+TGA+KASQL
Sbjct: 221 DIDPNTQQVVVVDPEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKASQL 280

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIE+LKQKLDAVRLS DTVE
Sbjct: 281 VLNAIEILKQKLDAVRLSEDTVE 303


>gb|KMT01164.1| hypothetical protein BVRB_9g224160 [Beta vulgaris subsp. vulgaris]
          Length = 1101

 Score =  254 bits (649), Expect(2) = e-121
 Identities = 128/177 (72%), Positives = 142/177 (80%)
 Frame = -3

Query: 961  HLQPTLQSTSPIFNPSAD*TKSQNNAP*QGFWIVRFPKIKIRTVRDDFMKFELRETDASI 782
            H  P    T    NP    T +      +G    RFP+IKIR +RDDF+KFELR+TD+S+
Sbjct: 762  HSLPPSTKTQKPKNPKTSVTLTM-----EGVSYQRFPRIKIREMRDDFLKFELRDTDSSV 816

Query: 781  ANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDAC 602
            ANALRRVMIAEVPT+A+DLVEIEVNSSVLNDEFIAHRLGLIPLTS+RAM+MRFSRDCDAC
Sbjct: 817  ANALRRVMIAEVPTVAVDLVEIEVNSSVLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDAC 876

Query: 601  DGDGQCEYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVDFPDSSTGLDNADNR 431
            DGDGQCEYCSVEFHLRAKCI DQTLDVTSKDL SSDHTV P+DF DS    D +DNR
Sbjct: 877  DGDGQCEYCSVEFHLRAKCIGDQTLDVTSKDLLSSDHTVTPIDFSDSPAADDASDNR 933



 Score =  210 bits (534), Expect(2) = e-121
 Identities = 109/143 (76%), Positives = 117/143 (81%)
 Frame = -2

Query: 431  ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
            EL LRAIARKGIGKDHAKWSPAATVTFMYEPEI IN              +VESSPTKVF
Sbjct: 945  ELKLRAIARKGIGKDHAKWSPAATVTFMYEPEILINEDLMETLTLEQKKAWVESSPTKVF 1004

Query: 251  DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
            DI+ NTQQV I D EAY YDDEV+KKAEAMGKPGLVEI+ KEDSFIFTVE+TGA+KA QL
Sbjct: 1005 DIDPNTQQVVIVDPEAYAYDDEVIKKAEAMGKPGLVEIYPKEDSFIFTVESTGAVKAYQL 1064

Query: 71   FLNAIEVLKQKLDAVRLSADTVE 3
             LNAIE+LKQKLDAVRL  DTV+
Sbjct: 1065 VLNAIEILKQKLDAVRLPEDTVD 1087


>ref|XP_010691712.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Beta vulgaris subsp. vulgaris]
           gi|731360257|ref|XP_010691713.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 3 [Beta vulgaris
           subsp. vulgaris]
          Length = 318

 Score =  253 bits (647), Expect(2) = e-121
 Identities = 122/149 (81%), Positives = 135/149 (90%)
 Frame = -3

Query: 877 QGFWIVRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSV 698
           +G    RFP+IKIR +RDDF+KFELR+TD+S+ANALRRVMIAEVPT+A+DLVEIEVNSSV
Sbjct: 2   EGVSYQRFPRIKIREMRDDFLKFELRDTDSSVANALRRVMIAEVPTVAVDLVEIEVNSSV 61

Query: 697 LNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVT 518
           LNDEFIAHRLGLIPLTS+RAM+MRFSRDCDACDGDGQCEYCSVEFHLRAKCI DQTLDVT
Sbjct: 62  LNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCIGDQTLDVT 121

Query: 517 SKDLYSSDHTVVPVDFPDSSTGLDNADNR 431
           SKDL SSDHTV P+DF DS    D +DNR
Sbjct: 122 SKDLLSSDHTVTPIDFSDSPAADDASDNR 150



 Score =  210 bits (534), Expect(2) = e-121
 Identities = 109/143 (76%), Positives = 117/143 (81%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEPEI IN              +VESSPTKVF
Sbjct: 162 ELKLRAIARKGIGKDHAKWSPAATVTFMYEPEILINEDLMETLTLEQKKAWVESSPTKVF 221

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
           DI+ NTQQV I D EAY YDDEV+KKAEAMGKPGLVEI+ KEDSFIFTVE+TGA+KA QL
Sbjct: 222 DIDPNTQQVVIVDPEAYAYDDEVIKKAEAMGKPGLVEIYPKEDSFIFTVESTGAVKAYQL 281

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIE+LKQKLDAVRL  DTV+
Sbjct: 282 VLNAIEILKQKLDAVRLPEDTVD 304


>ref|XP_009785778.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Nicotiana sylvestris]
          Length = 318

 Score =  256 bits (655), Expect(2) = e-121
 Identities = 124/149 (83%), Positives = 139/149 (93%)
 Frame = -3

Query: 877 QGFWIVRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSV 698
           +G    RFP+IKIR V+DD+MKFELR+TDASIANALRRVMIAEVPTIAIDLVEIEVNSSV
Sbjct: 2   EGVSYQRFPRIKIREVKDDYMKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSSV 61

Query: 697 LNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVT 518
           LNDEFI+HRLGLIPLTSERAM+MRFSRDCDACDGDGQCEYCSVEF+LR KC++DQTLDVT
Sbjct: 62  LNDEFISHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDVT 121

Query: 517 SKDLYSSDHTVVPVDFPDSSTGLDNADNR 431
           SKDL SSDHTVVPVD+ D+S+G DN+ N+
Sbjct: 122 SKDLLSSDHTVVPVDYSDASSGFDNSTNK 150



 Score =  206 bits (525), Expect(2) = e-121
 Identities = 110/143 (76%), Positives = 117/143 (81%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGI KDHAKWSPAATVTFMYEP+IYIN             E V+SSPTKVF
Sbjct: 162 ELRLRAIARKGIAKDHAKWSPAATVTFMYEPDIYINEDMMETLTLEEKRELVDSSPTKVF 221

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
            I+   + V + DAEAYTYDDEVLKK EAMGKPGL+EIHAKEDSFIFTVETTGA+KASQL
Sbjct: 222 GIDPENK-VIVVDAEAYTYDDEVLKKCEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQL 280

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIEVLKQKLDAVRLS DTVE
Sbjct: 281 VLNAIEVLKQKLDAVRLSDDTVE 303


>ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein
           [Populus trichocarpa] gi|550331423|gb|EEE87820.2|
           DNA-directed RNA polymerase II 36 kDa polypeptide B
           family protein [Populus trichocarpa]
          Length = 323

 Score =  253 bits (645), Expect(2) = e-120
 Identities = 124/142 (87%), Positives = 131/142 (92%)
 Frame = -3

Query: 859 RFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI 680
           RFPKIKIR ++DD++KFELRETDAS+ANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI
Sbjct: 8   RFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI 67

Query: 679 AHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDLYS 500
           AHRLGLIPLTSERAM MRFSRDCDACDGDGQCEYCSVEFHLRAKCI DQTLDVTSKDLYS
Sbjct: 68  AHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDVTSKDLYS 127

Query: 499 SDHTVVPVDFPDSSTGLDNADN 434
           SDH V+PVDF D S   D  D+
Sbjct: 128 SDHAVIPVDFSDPSDANDPFDH 149



 Score =  210 bits (534), Expect(2) = e-120
 Identities = 108/143 (75%), Positives = 119/143 (83%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+IN              ++ESSPTKVF
Sbjct: 166 ELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMETLTLEEKLSWIESSPTKVF 225

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
           DI+  TQQV + D EAYTYDDEV+KKAEAMGK GL++I AKEDSFIFTVE+TGA+KASQL
Sbjct: 226 DIDKVTQQVVVVDPEAYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAVKASQL 285

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIE+LKQKLDAVRLS DTVE
Sbjct: 286 VLNAIEILKQKLDAVRLSDDTVE 308


>ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Cicer arietinum]
          Length = 319

 Score =  253 bits (645), Expect(2) = e-120
 Identities = 122/149 (81%), Positives = 135/149 (90%)
 Frame = -3

Query: 877 QGFWIVRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSV 698
           +G    R P++KIR ++DD+MKFELR+TDAS+ANALRRVMI+EVPTIAIDLVEIEVNSSV
Sbjct: 2   EGASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTIAIDLVEIEVNSSV 61

Query: 697 LNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVT 518
           LNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLR KCI DQTLDVT
Sbjct: 62  LNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDVT 121

Query: 517 SKDLYSSDHTVVPVDFPDSSTGLDNADNR 431
           SKDLYSSDHTVVPVDF    + L+++D R
Sbjct: 122 SKDLYSSDHTVVPVDFSADPSSLESSDGR 150



 Score =  209 bits (532), Expect(2) = e-120
 Identities = 108/143 (75%), Positives = 121/143 (84%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEP+I+IN             E+V+SSPT+VF
Sbjct: 162 ELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHINEDLMESLTLEEKREWVDSSPTRVF 221

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
           DI+  TQQV + D EAY+YDDEV+KKAEAMGKPGLVEI AK+DSFIFTVE+TGA+KASQL
Sbjct: 222 DIDPVTQQVMVVDPEAYSYDDEVIKKAEAMGKPGLVEITAKQDSFIFTVESTGAVKASQL 281

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIE+LKQKLDAVRLS DTVE
Sbjct: 282 LLNAIEILKQKLDAVRLSEDTVE 304


>ref|XP_009605052.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Nicotiana tomentosiformis]
          Length = 318

 Score =  256 bits (655), Expect(2) = e-120
 Identities = 124/149 (83%), Positives = 139/149 (93%)
 Frame = -3

Query: 877 QGFWIVRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSV 698
           +G    RFP+IKIR V+DD+MKFELR+TDASIANALRRVMIAEVPTIAIDLVEIEVNSSV
Sbjct: 2   EGVSYQRFPRIKIREVKDDYMKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSSV 61

Query: 697 LNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVT 518
           LNDEFI+HRLGLIPLTSERAM+MRFSRDCDACDGDGQCEYCSVEF+LR KC++DQTLDVT
Sbjct: 62  LNDEFISHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDVT 121

Query: 517 SKDLYSSDHTVVPVDFPDSSTGLDNADNR 431
           SKDL SSDHTVVPVD+ D+S+G DN+ N+
Sbjct: 122 SKDLLSSDHTVVPVDYSDASSGFDNSTNK 150



 Score =  204 bits (520), Expect(2) = e-120
 Identities = 109/143 (76%), Positives = 116/143 (81%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGI KDHAKWSPAATVTFMYEP+IYIN             E V+SSPTKVF
Sbjct: 162 ELRLRAIARKGIAKDHAKWSPAATVTFMYEPDIYINEDMMETLTLNEKRELVDSSPTKVF 221

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
            I+   + V + D EAYTYDDEVLKK EAMGKPGL+EIHAKEDSFIFTVETTGA+KASQL
Sbjct: 222 GIDPENK-VIVVDPEAYTYDDEVLKKCEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQL 280

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIEVLKQKLDAVRLS DTVE
Sbjct: 281 VLNAIEVLKQKLDAVRLSDDTVE 303


>ref|XP_015892771.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Ziziphus jujuba]
          Length = 318

 Score =  255 bits (651), Expect(2) = e-120
 Identities = 124/143 (86%), Positives = 138/143 (96%)
 Frame = -3

Query: 859 RFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI 680
           RFPK+KIR ++DD++KFELRETDAS+ANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI
Sbjct: 8   RFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI 67

Query: 679 AHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDLYS 500
           AHRLGL+PLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC +DQTLDVTSKDLYS
Sbjct: 68  AHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYS 127

Query: 499 SDHTVVPVDFPDSSTGLDNADNR 431
           SDHTVVPVDF DS+ G D+++NR
Sbjct: 128 SDHTVVPVDFSDSA-GYDSSENR 149



 Score =  206 bits (524), Expect(2) = e-120
 Identities = 108/143 (75%), Positives = 118/143 (82%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEP+I IN              +V+SSPTKVF
Sbjct: 161 ELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVF 220

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
           DI+ NT QV + D EAYTYD+EV+KKA+AMGK GLV+I AKEDSFIFTVE+TGAIKASQL
Sbjct: 221 DIDPNTHQVVVVDPEAYTYDEEVIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQL 280

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIEVLKQKLDAVRLS DTVE
Sbjct: 281 LLNAIEVLKQKLDAVRLSDDTVE 303


>ref|XP_011000984.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Populus euphratica] gi|743794734|ref|XP_011000991.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 3-like [Populus euphratica]
          Length = 323

 Score =  250 bits (638), Expect(2) = e-120
 Identities = 123/138 (89%), Positives = 128/138 (92%)
 Frame = -3

Query: 859 RFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI 680
           RFPKIKIR ++DD++KFELRETDAS+ANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI
Sbjct: 8   RFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFI 67

Query: 679 AHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDLYS 500
           AHRLGLIPLTSERAM MRFSRDCDACDGDGQCEYCSVEFHLRAKCI DQTLDVTSKDLYS
Sbjct: 68  AHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDVTSKDLYS 127

Query: 499 SDHTVVPVDFPDSSTGLD 446
           SDH V PVDF D S   D
Sbjct: 128 SDHAVTPVDFSDPSDDND 145



 Score =  210 bits (535), Expect(2) = e-120
 Identities = 109/143 (76%), Positives = 119/143 (83%)
 Frame = -2

Query: 431 ELGLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVF 252
           EL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+IN              ++ESSPTKVF
Sbjct: 166 ELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMETLTLEEKLSWIESSPTKVF 225

Query: 251 DINANTQQVYIYDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL 72
           DI+  TQQV + D EAYTYDDEV+KKAEAMGK GL++I AKEDSFIFTVE+TGAIKASQL
Sbjct: 226 DIDKVTQQVVVVDPEAYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAIKASQL 285

Query: 71  FLNAIEVLKQKLDAVRLSADTVE 3
            LNAIE+LKQKLDAVRLS DTVE
Sbjct: 286 VLNAIEILKQKLDAVRLSDDTVE 308