BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00010315
         (663 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         293   5e-93
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   303   8e-92
ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392...   296   2e-89
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   295   2e-89
gb|AIC77183.1| polyprotein [Gossypium barbadense]                     295   3e-89
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         294   9e-89
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   294   9e-89
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   293   1e-88
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   292   3e-88
gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sat...   290   6e-88
gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposo...   288   8e-88
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...   290   8e-88
gb|ABR16307.1| unknown [Picea sitchensis]                             272   3e-87
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   288   4e-87
gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposo...   288   1e-86
gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposo...   288   1e-86
gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposo...   288   1e-86
gb|KYP39282.1| Retrovirus-related Pol polyprotein from transposo...   276   1e-86
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza...   288   1e-86
gb|KYP68962.1| Retrovirus-related Pol polyprotein from transposo...   270   2e-86

>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  293 bits (750), Expect = 5e-93
 Identities = 139/218 (63%), Positives = 167/218 (76%)
 Frame = +2

Query: 2   CGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLR 181
           CGP +  SL  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IKT+R
Sbjct: 32  CGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMR 91

Query: 182 TDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKT 361
           +D GGEF  K FL YC+D GI RQLTV  SPQQNGVAERKNRTI+EMARSM+  K LPK 
Sbjct: 92  SDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKE 151

Query: 362 FWAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFD 541
            WAEAV  AVY+LNRSPTK+V  KTP EAW  RKP V+HL+VFG IA++H+P ++R K D
Sbjct: 152 LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLD 211

Query: 542 EKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
           +K EK IF+GY + SKGY+L NP T K IISR+++FDE
Sbjct: 212 DKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 249


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  303 bits (775), Expect = 8e-92
 Identities = 141/218 (64%), Positives = 171/218 (78%)
 Frame = +2

Query: 2    CGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLR 181
            CGP  TPS  +N+YF+LF+DDF+RM WV+ +KQKSE F  F +FK +VE QSG  IKTLR
Sbjct: 600  CGPMSTPSQGNNKYFVLFIDDFTRMTWVFFMKQKSEVFSIFKKFKSFVEKQSGCYIKTLR 659

Query: 182  TDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKT 361
            +DRG E+    F ++C+D+G+ RQLTV Y+PQQNGV ERKN+T++EMA++M+  KGLPK 
Sbjct: 660  SDRGMEYTSSQFGNFCEDEGVERQLTVAYTPQQNGVVERKNQTVMEMAKAMLYEKGLPKI 719

Query: 362  FWAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFD 541
            FWAEAVN AVY+LNR PTKA+ NKTP EAW  RKP V H KVFGC+ YS +P Q+R K D
Sbjct: 720  FWAEAVNTAVYLLNRCPTKALLNKTPIEAWSGRKPSVRHFKVFGCLCYSQVPKQRRSKLD 779

Query: 542  EKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            E  EK IF+GYS +SKGYRL N KT KLIISRDVIFDE
Sbjct: 780  ETSEKCIFMGYSSQSKGYRLYNLKTXKLIISRDVIFDE 817


>ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392554, partial [Brassica
            napus]
          Length = 2682

 Score =  296 bits (759), Expect = 2e-89
 Identities = 142/218 (65%), Positives = 169/218 (77%)
 Frame = +2

Query: 2    CGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLR 181
            CGP +  SL  + YFLLF+DDFSR  WVY LKQKSE F  F +FK +VE +SG KIK++R
Sbjct: 543  CGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEVFENFKKFKAHVEKESGLKIKSMR 602

Query: 182  TDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKT 361
            +DRGGEF+ K FL YC+D GI RQLTV  +PQQNGVAERKNRTI+EMARSM+  K LPK 
Sbjct: 603  SDRGGEFMSKEFLKYCEDNGIRRQLTVPRTPQQNGVAERKNRTILEMARSMLKSKKLPKE 662

Query: 362  FWAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFD 541
             WAEAV  AVYI NRSPTK+V  KTP EAW  RKP V+HL+VFG IA++H+P ++R K D
Sbjct: 663  LWAEAVACAVYISNRSPTKSVLEKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLD 722

Query: 542  EKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            +K EK IF+GY   SKGY+L NP+T K IISR+VIFDE
Sbjct: 723  DKSEKYIFIGYDANSKGYKLYNPETKKTIISRNVIFDE 760



 Score =  296 bits (759), Expect = 2e-89
 Identities = 142/218 (65%), Positives = 169/218 (77%)
 Frame = +2

Query: 2    CGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLR 181
            CGP +  SL  + YFLLF+DDFSR  WVY LKQKSE F  F +FK +VE +SG KIK++R
Sbjct: 1882 CGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEVFENFKKFKAHVEKESGLKIKSMR 1941

Query: 182  TDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKT 361
            +DRGGEF+ K FL YC+D GI RQLTV  +PQQNGVAERKNRTI+EMARSM+  K LPK 
Sbjct: 1942 SDRGGEFMSKEFLKYCEDNGIRRQLTVPRTPQQNGVAERKNRTILEMARSMLKSKKLPKE 2001

Query: 362  FWAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFD 541
             WAEAV  AVYI NRSPTK+V  KTP EAW  RKP V+HL+VFG IA++H+P ++R K D
Sbjct: 2002 LWAEAVACAVYISNRSPTKSVLEKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLD 2061

Query: 542  EKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            +K EK IF+GY   SKGY+L NP+T K IISR+VIFDE
Sbjct: 2062 DKSEKYIFIGYDANSKGYKLYNPETKKTIISRNVIFDE 2099


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  295 bits (756), Expect = 2e-89
 Identities = 140/218 (64%), Positives = 168/218 (77%)
 Frame = +2

Query: 2    CGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLR 181
            CGP +  SL  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IKT+R
Sbjct: 535  CGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMR 594

Query: 182  TDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKT 361
            +DRGGEF  K FL YC+D GI RQLTV  SPQQNGVAERKNRTI+EMARSM+  K LPK 
Sbjct: 595  SDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKE 654

Query: 362  FWAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFD 541
             WAEAV  AVY+LNRSPTK+V  KTP EAW  RKP V+HL+VFG IA++H+P ++R K D
Sbjct: 655  LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLD 714

Query: 542  EKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            +K EK IF+GY + SKGY+L NP T K IISR+++FDE
Sbjct: 715  DKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752


>gb|AIC77183.1| polyprotein [Gossypium barbadense]
          Length = 1369

 Score =  295 bits (756), Expect = 3e-89
 Identities = 141/217 (64%), Positives = 166/217 (76%)
 Frame = +2

Query: 5    GPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRT 184
            GP    SL  NRY+L F+DD+SR  WVY LK KSEA  KF EFK  VE QSGR +K LR+
Sbjct: 553  GPYDIESLGGNRYYLTFIDDYSRKCWVYFLKAKSEALEKFKEFKAMVEKQSGRYLKILRS 612

Query: 185  DRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKTF 364
            DRGGE+  K +  +CKD GI  QLT R +PQQNGVAERKNRTI++MARSM+ GK LP+TF
Sbjct: 613  DRGGEYTAKLYESFCKDHGIIHQLTARRTPQQNGVAERKNRTILDMARSMIKGKHLPRTF 672

Query: 365  WAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFDE 544
            WAEAV  AVY+LN+ PTK+V +KTP EAW   KP+V HLK+FGCIAY+H+P QQR+K D+
Sbjct: 673  WAEAVECAVYLLNQCPTKSVRHKTPEEAWSGHKPRVGHLKIFGCIAYAHVPEQQRKKLDD 732

Query: 545  KGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            +GEK IF+GY   SK YRL NP T KLIISRDV FDE
Sbjct: 733  RGEKCIFIGYDKRSKAYRLYNPLTKKLIISRDVEFDE 769


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  294 bits (752), Expect = 9e-89
 Identities = 139/218 (63%), Positives = 167/218 (76%)
 Frame = +2

Query: 2    CGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLR 181
            CGP +  SL  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IKT+R
Sbjct: 535  CGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMR 594

Query: 182  TDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKT 361
            +DRGGEF  K FL YC+D GI RQLTV  SPQQNGV ERKNRTI+EMARSM+  K LPK 
Sbjct: 595  SDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKE 654

Query: 362  FWAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFD 541
             WAEAV  AVY+LNRSPTK+V  KTP EAW  RKP V+HL+VFG IA++H+P ++R K D
Sbjct: 655  LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLD 714

Query: 542  EKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            +K EK IF+GY + SKGY+L NP T K IISR+++FDE
Sbjct: 715  DKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  294 bits (752), Expect = 9e-89
 Identities = 139/218 (63%), Positives = 167/218 (76%)
 Frame = +2

Query: 2    CGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLR 181
            CGP +  SL  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IKT+R
Sbjct: 535  CGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMR 594

Query: 182  TDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKT 361
            +DRGGEF  K FL YC+D GI RQLTV  SPQQNGV ERKNRTI+EMARSM+  K LPK 
Sbjct: 595  SDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKE 654

Query: 362  FWAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFD 541
             WAEAV  AVY+LNRSPTK+V  KTP EAW  RKP V+HL+VFG IA++H+P ++R K D
Sbjct: 655  LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLD 714

Query: 542  EKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            +K EK IF+GY + SKGY+L NP T K IISR+++FDE
Sbjct: 715  DKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  293 bits (750), Expect = 1e-88
 Identities = 139/218 (63%), Positives = 167/218 (76%)
 Frame = +2

Query: 2    CGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLR 181
            CGP +  SL  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IKT+R
Sbjct: 535  CGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMR 594

Query: 182  TDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKT 361
            +D GGEF  K FL YC+D GI RQLTV  SPQQNGVAERKNRTI+EMARSM+  K LPK 
Sbjct: 595  SDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKE 654

Query: 362  FWAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFD 541
             WAEAV  AVY+LNRSPTK+V  KTP EAW  RKP V+HL+VFG IA++H+P ++R K D
Sbjct: 655  LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLD 714

Query: 542  EKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            +K EK IF+GY + SKGY+L NP T K IISR+++FDE
Sbjct: 715  DKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  292 bits (748), Expect = 3e-88
 Identities = 139/218 (63%), Positives = 167/218 (76%)
 Frame = +2

Query: 2    CGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLR 181
            CGP +  SL  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IKT+R
Sbjct: 535  CGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMR 594

Query: 182  TDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKT 361
            +DRGGEF  K FL YC+D GI RQLTV  SPQQNGVAERKNRTI+EMARSM+  K LPK 
Sbjct: 595  SDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKE 654

Query: 362  FWAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFD 541
             WAEAV  AVY+LNRSPTK+V  KTP EAW  RK  V+HL+VFG IA++H+P ++R K D
Sbjct: 655  LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLD 714

Query: 542  EKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            +K EK IF+GY + SKGY+L NP T K IISR+++FDE
Sbjct: 715  DKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752


>gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108708461|gb|ABF96256.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1167

 Score =  290 bits (742), Expect = 6e-88
 Identities = 136/217 (62%), Positives = 169/217 (77%)
 Frame = +2

Query: 5    GPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRT 184
            G   T S   N YF+ F+DD++RM+WVY LK+KS A   F +FK  VENQS RKIK LR+
Sbjct: 400  GKVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRS 459

Query: 185  DRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKTF 364
            D+GGE+I K F  YC++ GI RQLT  YS QQNGVAERKNRTI +MA SM+  KG+PK+F
Sbjct: 460  DQGGEYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSF 519

Query: 365  WAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFDE 544
            WAEAVN A+YILNRSPTKAVPN+TP+EAW+ +KP + H++VFGCI Y+ +P+Q+R KFD 
Sbjct: 520  WAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDN 579

Query: 545  KGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            K ++ IFVGY+D  KGYRL N +  K+IISRDVIFDE
Sbjct: 580  KSDRCIFVGYADGIKGYRLYNLEKKKIIISRDVIFDE 616


>gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1033

 Score =  288 bits (737), Expect = 8e-88
 Identities = 137/218 (62%), Positives = 164/218 (75%)
 Frame = +2

Query: 2    CGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLR 181
            CGP +  SL  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IK LR
Sbjct: 467  CGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALR 526

Query: 182  TDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKT 361
            +DRGGEF  K F  YC+D GI RQLTV  SPQQNGVAERKNRTI+EMARSM+  K LPK 
Sbjct: 527  SDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKE 586

Query: 362  FWAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFD 541
            FWAEAV  AVY+ NRSPT++V  KTP EAW  RKP ++HL+VFG IA+ H+P ++R K D
Sbjct: 587  FWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLD 646

Query: 542  EKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            +K EK IF+GY   SKGY+L NP + K IISR+V+FDE
Sbjct: 647  DKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDE 684


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1198

 Score =  290 bits (742), Expect = 8e-88
 Identities = 136/217 (62%), Positives = 169/217 (77%)
 Frame = +2

Query: 5    GPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRT 184
            G   T S   N YF+ F+DD++RM+WVY LK+KS A   F +FK  VENQS RKIK LR+
Sbjct: 477  GKVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRS 536

Query: 185  DRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKTF 364
            D+GGE+I K F  YC++ GI RQLT  YS QQNGVAERKNRTI +MA SM+  KG+PK+F
Sbjct: 537  DQGGEYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSF 596

Query: 365  WAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFDE 544
            WAEAVN A+YILNRSPTKAVPN+TP+EAW+ +KP + H++VFGCI Y+ +P+Q+R KFD 
Sbjct: 597  WAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDN 656

Query: 545  KGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            K ++ IFVGY+D  KGYRL N +  K+IISRDVIFDE
Sbjct: 657  KSDRCIFVGYADGIKGYRLYNLEKKKIIISRDVIFDE 693


>gb|ABR16307.1| unknown [Picea sitchensis]
          Length = 407

 Score =  272 bits (695), Expect = 3e-87
 Identities = 126/217 (58%), Positives = 160/217 (73%)
 Frame = +2

Query: 5   GPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRT 184
           GP + PS++ +RY L F+DD+SR +WVY LK K E F KF EFK +VE QSG+ IK LRT
Sbjct: 143 GPLEHPSISGSRYVLTFIDDYSRRIWVYFLKNKDEVFEKFKEFKAFVEKQSGKSIKILRT 202

Query: 185 DRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKTF 364
           D G E++ K F  YCK  GI R+ TV Y+PQQNGVAERKNRT++EMAR M+  + +   F
Sbjct: 203 DNGKEYVNKEFDHYCKYNGIKREHTVPYTPQQNGVAERKNRTLMEMARCMLHARNMDPKF 262

Query: 365 WAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFDE 544
           WAEA+N A YI+NR+PT AV +KTP EAW +RKP V+H KVFGC  Y HIP ++R+K D 
Sbjct: 263 WAEAINTATYIVNRTPTIAVKHKTPEEAWSRRKPTVSHFKVFGCDVYVHIPDEKRKKLDR 322

Query: 545 KGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
           K  K I VGYS+ SK YR+ +P+ N+++I RDVIFDE
Sbjct: 323 KSHKCIMVGYSETSKAYRVYDPEKNEILIRRDVIFDE 359


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1142

 Score =  288 bits (736), Expect = 4e-87
 Identities = 135/217 (62%), Positives = 168/217 (77%)
 Frame = +2

Query: 5   GPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRT 184
           G   T S   N YF+ F+DD++RM+WVY LK+KS A   F +FK  VENQS RKIK LR+
Sbjct: 316 GKVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRS 375

Query: 185 DRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKTF 364
           D+GGE+I K F  YC++ GI RQLT  YS QQNGVAERKNRTI +MA SM+  KG+PK+F
Sbjct: 376 DQGGEYISKEFEKYCENAGIRRQLTAGYSTQQNGVAERKNRTINDMANSMLQDKGMPKSF 435

Query: 365 WAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFDE 544
           WAEAVN A+YILNRSPTKAVPN+TP+EAW+ +KP + H++VFGCI Y+ +P+Q+R KFD 
Sbjct: 436 WAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDN 495

Query: 545 KGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
           K ++ IFVGY+D  KGYRL N +  K+II RDVIFDE
Sbjct: 496 KSDRCIFVGYADGIKGYRLYNLEKKKIIIIRDVIFDE 532


>gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1331

 Score =  288 bits (737), Expect = 1e-86
 Identities = 137/218 (62%), Positives = 164/218 (75%)
 Frame = +2

Query: 2    CGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLR 181
            CGP +  SL  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IK LR
Sbjct: 522  CGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALR 581

Query: 182  TDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKT 361
            +DRGGEF  K F  YC+D GI RQLTV  SPQQNGVAERKNRTI+EMARSM+  K LPK 
Sbjct: 582  SDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKE 641

Query: 362  FWAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFD 541
            FWAEAV  AVY+ NRSPT++V  KTP EAW  RKP ++HL+VFG IA+ H+P ++R K D
Sbjct: 642  FWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLD 701

Query: 542  EKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            +K EK IF+GY   SKGY+L NP + K IISR+V+FDE
Sbjct: 702  DKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDE 739


>gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  288 bits (737), Expect = 1e-86
 Identities = 137/218 (62%), Positives = 164/218 (75%)
 Frame = +2

Query: 2    CGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLR 181
            CGP +  SL  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IK LR
Sbjct: 533  CGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALR 592

Query: 182  TDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKT 361
            +DRGGEF  K F  YC+D GI RQLTV  SPQQNGVAERKNRTI+EMARSM+  K LPK 
Sbjct: 593  SDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKE 652

Query: 362  FWAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFD 541
            FWAEAV  AVY+ NRSPT++V  KTP EAW  RKP ++HL+VFG IA+ H+P ++R K D
Sbjct: 653  FWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLD 712

Query: 542  EKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            +K EK IF+GY   SKGY+L NP + K IISR+V+FDE
Sbjct: 713  DKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDE 750


>gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  288 bits (737), Expect = 1e-86
 Identities = 137/218 (62%), Positives = 164/218 (75%)
 Frame = +2

Query: 2    CGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLR 181
            CGP +  SL  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IK LR
Sbjct: 533  CGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALR 592

Query: 182  TDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKT 361
            +DRGGEF  K F  YC+D GI RQLTV  SPQQNGVAERKNRTI+EMARSM+  K LPK 
Sbjct: 593  SDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKE 652

Query: 362  FWAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFD 541
            FWAEAV  AVY+ NRSPT++V  KTP EAW  RKP ++HL+VFG IA+ H+P ++R K D
Sbjct: 653  FWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLD 712

Query: 542  EKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            +K EK IF+GY   SKGY+L NP + K IISR+V+FDE
Sbjct: 713  DKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDE 750


>gb|KYP39282.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 586

 Score =  276 bits (705), Expect = 1e-86
 Identities = 127/218 (58%), Positives = 162/218 (74%)
 Frame = +2

Query: 2   CGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLR 181
           CGP    SLN N+YFLLF+DDF+RM WV+ LKQK + F  F +FK  VEN++G +IK LR
Sbjct: 316 CGPMSIASLNGNKYFLLFIDDFTRMSWVFFLKQKLDVFAAFQKFKTLVENEAGCQIKKLR 375

Query: 182 TDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKT 361
           +D G E+    F  +C   GI  Q TV Y+PQQNGV+ERKNRT++EMAR ++  KGLPKT
Sbjct: 376 SDNGTEYTAGEFKKFCDQAGIQHQFTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKT 435

Query: 362 FWAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFD 541
           FWAEAVN +VY+LN  PTKA+  KTPYEAW  RKP V HLK+FGC+ Y+H+P+ +R+K D
Sbjct: 436 FWAEAVNTSVYLLNLLPTKALKGKTPYEAWCGRKPSVEHLKIFGCVCYTHVPNVKRDKLD 495

Query: 542 EKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            K E  IF+GYS  +KGYR+ N +T K+I+SRD+ FDE
Sbjct: 496 HKCEVGIFLGYSINTKGYRVYNLETKKIIVSRDIKFDE 533


>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
            gi|31429795|gb|AAP51797.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1350

 Score =  288 bits (737), Expect = 1e-86
 Identities = 136/217 (62%), Positives = 168/217 (77%)
 Frame = +2

Query: 5    GPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRT 184
            G   T S   N YF+ F+DD++RM+WVY LK+KS A   F +FK  VENQS RKIK LR+
Sbjct: 449  GKVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRS 508

Query: 185  DRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKTF 364
            D+GGE+I K F  YC++ GI RQLT  YS QQNGVAERKNRTI +MA SM+  KG+PK+F
Sbjct: 509  DQGGEYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSF 568

Query: 365  WAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFDE 544
            WAEAVN A+YILNRSPTKAVPN+TP+EAW+ +KP + H++VFGCI Y+ +P+Q+R KFD 
Sbjct: 569  WAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDN 628

Query: 545  KGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
            K +  IFVGY+D  KGYRL N +  K+IISRDVIFDE
Sbjct: 629  KSDWCIFVGYADGIKGYRLYNLEKKKIIISRDVIFDE 665


>gb|KYP68962.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 401

 Score =  270 bits (689), Expect = 2e-86
 Identities = 129/218 (59%), Positives = 164/218 (75%)
 Frame = +2

Query: 2   CGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLR 181
           CGP +T SL++NRYF+LF+DDFSRM WVY +K+KSE F    +FK  VE QSG++IK LR
Sbjct: 105 CGPMRTSSLHNNRYFILFIDDFSRMTWVYFIKEKSEVFGILKKFKTLVEKQSGKQIKVLR 164

Query: 182 TDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKT 361
           +DRG E+    F  +C+D+GI ++LTV YSPQQNGV+ERKNRT++EMARSM+  KGLP T
Sbjct: 165 SDRGKEYTSHEFDKFCEDEGIEQKLTVSYSPQQNGVSERKNRTVMEMARSMLKEKGLPNT 224

Query: 362 FWAEAVNAAVYILNRSPTKAVPNKTPYEAWHQRKPQVNHLKVFGCIAYSHIPSQQREKFD 541
           FWAE V  AVYILNR PT+ V +KT  EAW  +KP   HL+VFG I Y H+  ++R K +
Sbjct: 225 FWAEVVYTAVYILNRCPTRTVQDKTLIEAWSGKKPSTKHLRVFGSICYIHVLEEKRHKLE 284

Query: 542 EKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDE 655
           +K  + IF+GYS +SKGYR+ N +T KLIISRDV  DE
Sbjct: 285 DKIVRGIFLGYSIQSKGYRVYNLQTKKLIISRDVEVDE 322