BLASTX nr result

ID: Rehmannia27_contig00009572 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00009572
         (610 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011100064.1| PREDICTED: pre-mRNA-splicing factor 38B-like...    60   2e-07
ref|XP_011085891.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...    60   2e-07
ref|XP_012845080.1| PREDICTED: pre-mRNA-splicing factor 38B [Ery...    56   6e-06

>ref|XP_011100064.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Sesamum indicum]
          Length = 415

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = +2

Query: 260 GHDENRPSPSRNGNKEKTPSASSNLAKLKDLYGDLSSQK 376
           GHD++RPSPS   +KE+T SASSNLAKLKDLYGDLS+QK
Sbjct: 351 GHDQHRPSPSGQDSKERT-SASSNLAKLKDLYGDLSNQK 388


>ref|XP_011085891.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor 38B-like
           [Sesamum indicum]
          Length = 435

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = +2

Query: 260 GHDENRPSPSRNGNKEKTPSASSNLAKLKDLYGDLSSQK 376
           GHD++RPSPS + +KEK  SASSNLAKLKDLYGDLS+QK
Sbjct: 371 GHDQSRPSPSGHDSKEKA-SASSNLAKLKDLYGDLSNQK 408


>ref|XP_012845080.1| PREDICTED: pre-mRNA-splicing factor 38B [Erythranthe guttata]
           gi|604319716|gb|EYU30880.1| hypothetical protein
           MIMGU_mgv1a007559mg [Erythranthe guttata]
          Length = 403

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +2

Query: 263 HDENRPSPSRNGNKEKTPSASSNLAKLKDLYGDLSSQK 376
           H++N PS SR+ +KEKT SASSNLAKLKDLYGDL SQK
Sbjct: 339 HEQNIPSTSRHESKEKT-SASSNLAKLKDLYGDLGSQK 375


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